0s autopkgtest [21:21:48]: starting date and time: 2024-03-17 21:21:48+0000 0s autopkgtest [21:21:48]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:21:48]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.v2v0cc4_/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rhtslib,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-variantannotation --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rhtslib/2.4.1+dfsg-3build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-9.secgroup --name adt-noble-ppc64el-r-bioc-variantannotation-20240317-212148-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 165s autopkgtest [21:24:33]: testbed dpkg architecture: ppc64el 165s autopkgtest [21:24:33]: testbed apt version: 2.7.12 165s autopkgtest [21:24:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 166s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 166s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [484 kB] 166s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 166s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3676 kB] 167s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 167s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 167s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 167s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 167s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 167s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3974 kB] 167s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 167s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 167s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 171s Fetched 9012 kB in 2s (3760 kB/s) 171s Reading package lists... 173s Reading package lists... 174s Building dependency tree... 174s Reading state information... 174s Calculating upgrade... 174s The following packages will be REMOVED: 174s libssl3 174s The following NEW packages will be installed: 174s libssl3t64 174s The following packages have been kept back: 174s curl 174s The following packages will be upgraded: 174s openssl 174s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 174s Need to get 3195 kB of archives. 174s After this operation, 6144 B of additional disk space will be used. 174s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 175s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 175s Fetched 3195 kB in 1s (4540 kB/s) 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 175s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 175s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 176s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 176s wget depends on libssl3 (>= 3.0.0). 176s tnftp depends on libssl3 (>= 3.0.0). 176s tcpdump depends on libssl3 (>= 3.0.0). 176s systemd-resolved depends on libssl3 (>= 3.0.0). 176s systemd depends on libssl3 (>= 3.0.0). 176s sudo depends on libssl3 (>= 3.0.0). 176s rsync depends on libssl3 (>= 3.0.0). 176s python3-cryptography depends on libssl3 (>= 3.0.0). 176s openssh-server depends on libssl3 (>= 3.0.10). 176s openssh-client depends on libssl3 (>= 3.0.10). 176s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 176s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 176s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 176s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 176s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 176s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 176s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 176s libnvme1 depends on libssl3 (>= 3.0.0). 176s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 176s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 176s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 176s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 176s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 176s kmod depends on libssl3 (>= 3.0.0). 176s dhcpcd-base depends on libssl3 (>= 3.0.0). 176s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 176s 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 176s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 176s Selecting previously unselected package libssl3t64:ppc64el. 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 176s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 176s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 176s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 176s Setting up openssl (3.0.13-0ubuntu1) ... 176s Processing triggers for man-db (2.12.0-3) ... 177s Processing triggers for libc-bin (2.39-0ubuntu2) ... 177s Reading package lists... 177s Building dependency tree... 177s Reading state information... 177s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 178s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 178s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 178s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 178s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 179s Reading package lists... 179s Reading package lists... 180s Building dependency tree... 180s Reading state information... 180s Calculating upgrade... 180s The following packages have been kept back: 180s curl 180s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 180s Reading package lists... 180s Building dependency tree... 180s Reading state information... 180s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 183s autopkgtest [21:24:51]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 185s autopkgtest [21:24:53]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-variantannotation 187s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (dsc) [2587 B] 187s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (tar) [1887 kB] 187s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (diff) [7900 B] 187s gpgv: Signature made Fri Dec 1 09:59:29 2023 UTC 187s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 187s gpgv: issuer "tillea@rki.de" 187s gpgv: Can't check signature: No public key 187s dpkg-source: warning: cannot verify inline signature for ./r-bioc-variantannotation_1.48.1-1.dsc: no acceptable signature found 187s autopkgtest [21:24:55]: testing package r-bioc-variantannotation version 1.48.1-1 188s autopkgtest [21:24:56]: build not needed 189s autopkgtest [21:24:57]: test pkg-r-autopkgtest: preparing testbed 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 191s Starting pkgProblemResolver with broken count: 0 191s Starting 2 pkgProblemResolver with broken count: 0 191s Done 191s The following additional packages will be installed: 191s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 191s cpp-powerpc64le-linux-gnu curl dctrl-tools fontconfig fontconfig-config 191s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 191s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 191s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 191s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 191s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 191s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 191s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 191s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 191s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 191s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 191s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 191s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 191s libjs-highlight.js libjs-jquery libjs-jquery-datatables 191s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 191s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 191s libjs-popper.js libjs-prettify libjs-sifter.js 191s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 191s liblatex-tounicode-perl liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 191s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 191s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 191s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 191s libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 libsm6 191s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 191s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 191s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 191s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 191s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 191s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 191s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 191s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 191s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 191s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 191s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 191s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 191s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 191s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 191s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 191s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 191s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 191s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 191s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 191s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 191s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 191s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 191s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 191s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 191s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 191s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 191s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 191s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 191s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 191s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 191s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 191s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 191s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 191s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 191s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 191s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 191s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 191s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 191s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 191s x11-common xdg-utils zip zlib1g-dev 191s Suggested packages: 191s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 191s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 191s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 191s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 191s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 191s libboost-context1.83-dev libboost-contract1.83-dev 191s libboost-coroutine1.83-dev libboost-date-time1.83-dev 191s libboost-exception1.83-dev libboost-fiber1.83-dev 191s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 191s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 191s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 191s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 191s libboost-numpy1.83-dev libboost-program-options1.83-dev 191s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 191s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 191s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 191s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 191s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 191s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 191s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 191s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 191s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 191s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 191s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 191s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 191s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-ensembldb 191s r-bioc-experimenthub r-bioc-all r-cran-testthat r-bioc-affy r-bioc-deseq2 191s r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 191s r-bioc-shortread r-cran-batchtools r-cran-data.table r-cran-mockery 191s r-cran-webmockr r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 191s r-bioc-delayedmatrixstats r-cran-r.utils r-bioc-edger 191s r-bioc-annotationfilter r-cran-markdown r-bioc-gviz r-bioc-dexseq 191s r-bioc-sparsematrixstats r-bioc-limma r-cran-hexbin r-bioc-rhdf5 191s r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-kernsmooth r-cran-kernlab 191s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg r-cran-viridis 191s r-cran-rstudioapi r-cran-rmysql r-cran-lubridate r-cran-magick r-cran-sf 191s r-cran-getopt r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 191s r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer 191s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-here 191s r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper ghostscript 191s gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 191s texlive-latex-base-doc wp2latex 191s Recommended packages: 191s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 191s r-recommended r-doc-html r-cran-testthat r-cran-remotes r-cran-downlit 191s r-cran-rstudioapi r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte 191s r-cran-webshot r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery 191s r-cran-processx r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench 191s r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr r-cran-spelling 191s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql r-cran-future 191s w3m | www-browser r-cran-unitizer r-cran-rsvg r-cran-pkgload r-cran-hexbin 191s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 191s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 191s r-cran-vdiffr r-cran-waldo r-cran-cairo r-cran-markdown r-cran-jpeg 191s r-cran-readr r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate 191s r-cran-rgl r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 191s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-usethis 191s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 191s r-cran-dichromat r-cran-data.table r-cran-mockr r-cran-formattable 191s r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 191s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 191s x11-xserver-utils 192s The following packages will be REMOVED: 192s libcurl4 libpsl5 192s The following NEW packages will be installed: 192s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 192s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 192s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 192s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 192s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 192s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 192s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 192s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 192s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 192s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 192s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 192s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 192s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 192s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 192s libjs-highlight.js libjs-jquery libjs-jquery-datatables 192s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 192s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 192s libjs-popper.js libjs-prettify libjs-sifter.js 192s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 192s liblatex-tounicode-perl liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 192s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 192s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 192s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 192s libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 libsm6 192s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 192s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 192s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 192s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 192s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 192s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 192s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 192s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 192s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 192s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 192s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 192s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 192s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 192s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 192s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 192s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 192s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 192s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 192s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 192s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 192s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 192s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 192s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 192s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 192s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 192s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 192s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 192s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 192s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 192s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 192s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 192s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 192s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 192s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 192s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 192s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 192s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 192s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 192s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 192s x11-common xdg-utils zip zlib1g-dev 192s The following packages will be upgraded: 192s curl 192s 1 upgraded, 301 newly installed, 2 to remove and 0 not upgraded. 192s Need to get 466 MB/466 MB of archives. 192s After this operation, 1460 MB of additional disk space will be used. 192s Get:1 /tmp/autopkgtest.6kmacK/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [776 B] 192s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1 [59.0 kB] 192s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu7 [234 kB] 192s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu7 [428 kB] 192s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 192s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 192s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 192s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 192s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 192s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 192s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 192s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 192s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 192s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 193s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 193s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 193s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 193s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 193s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 193s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 193s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 193s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 193s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 193s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 193s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 193s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 193s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 193s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 193s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 193s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 193s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 193s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 193s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 194s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 194s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 194s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 194s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 194s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 194s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 194s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 194s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 194s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 194s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 194s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 194s Get:45 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 194s Get:46 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 194s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 194s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 194s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 194s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 194s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 194s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 194s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 194s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 194s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 194s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 194s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 194s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 194s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 194s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 194s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 195s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 195s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 195s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 195s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 195s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 195s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 195s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 195s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 195s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 195s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 195s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 195s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 195s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 195s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 195s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 195s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 195s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 195s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 195s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 195s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 195s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 195s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 195s Get:84 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 195s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 195s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 195s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 195s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 195s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 195s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 195s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 195s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 195s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 195s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 195s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 195s Get:96 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 195s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9 [71.2 kB] 195s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 196s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 196s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 196s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 196s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 196s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 196s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 196s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 196s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 196s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 196s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 196s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 196s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 196s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 196s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 196s Get:113 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 196s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 196s Get:115 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 197s Get:116 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 197s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9 [42.9 kB] 197s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 197s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 197s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 197s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9 [68.6 kB] 197s Get:122 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 197s Get:123 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 197s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9 [163 kB] 197s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 197s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 197s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 197s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 197s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 197s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 197s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 197s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3 [57.2 kB] 197s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 197s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1 [227 kB] 197s Get:135 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 197s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13 ppc64el 0.13.72+dfsg.1-1.1 [29.7 kB] 197s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 197s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 197s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 197s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 197s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 201s Get:142 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 201s Get:143 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 201s Get:144 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 201s Get:145 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 201s Get:146 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 201s Get:147 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 201s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 205s Get:149 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 205s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 205s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 205s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 205s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 205s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 206s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 206s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 206s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 206s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 206s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 207s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 207s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 207s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 207s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 207s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 207s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 207s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 207s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 207s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 207s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 207s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 207s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 208s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 208s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 208s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 208s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 208s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 208s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 208s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 208s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 208s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 208s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 208s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 208s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 208s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 208s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 210s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 211s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 211s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 213s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 213s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 214s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 214s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 214s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 214s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 214s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 214s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 214s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 214s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 214s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 214s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 214s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 214s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 214s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 215s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 215s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 215s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 215s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 215s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocversion all 3.18.1-1 [11.0 kB] 215s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 215s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 215s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 215s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 215s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 215s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 215s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 215s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1 [527 kB] 215s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 215s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 215s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 215s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 215s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 215s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 216s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 216s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 216s Get:225 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 216s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1 [231 kB] 216s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 216s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 216s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 216s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 216s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 216s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 216s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 216s Get:234 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 216s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 216s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 216s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 216s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 216s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 216s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lazyeval ppc64el 0.2.2-1build1 [144 kB] 216s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 216s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dt all 0.31+dfsg-1 [265 kB] 216s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 216s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 216s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 216s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 216s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 216s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 216s Get:249 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 216s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 216s Get:251 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 216s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 216s Get:253 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 216s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 217s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 217s Get:256 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 217s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9 [12.4 MB] 217s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 217s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 217s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 219s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 219s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 219s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 219s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 219s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 219s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 219s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 219s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 219s Get:269 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-3build1 [1552 kB] 219s Get:270 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1 [3801 kB] 220s Get:271 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 220s Get:272 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 220s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 220s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 220s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 220s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 220s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 220s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 220s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 220s Get:280 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 220s Get:281 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 220s Get:282 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 220s Get:283 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 220s Get:284 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-bsgenome all 1.70.2-1 [6975 kB] 220s Get:285 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 220s Get:286 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-survival ppc64el 3.5-8-1 [6160 kB] 220s Get:287 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-snpstats ppc64el 1.52.0+dfsg-1 [7274 kB] 220s Get:288 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-variantannotation ppc64el 1.48.1-1 [3649 kB] 221s Get:289 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-colorspace ppc64el 2.1-0+dfsg-1 [1542 kB] 221s Get:290 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-farver ppc64el 2.1.1-1 [1365 kB] 221s Get:291 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 221s Get:292 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 221s Get:293 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 221s Get:294 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-nlme ppc64el 3.1.164-1 [2281 kB] 221s Get:295 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB] 221s Get:296 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 221s Get:297 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-munsell all 0.5.0-2build1 [208 kB] 221s Get:298 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 221s Get:299 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB] 221s Get:300 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB] 221s Get:301 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 221s Get:302 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 222s Preconfiguring packages ... 222s Fetched 466 MB in 29s (15.8 MB/s) 222s dpkg: libpsl5:ppc64el: dependency problems, but removing anyway as you requested: 222s wget depends on libpsl5 (>= 0.16.0). 222s libcurl4:ppc64el depends on libpsl5 (>= 0.16.0). 222s libcurl3-gnutls:ppc64el depends on libpsl5 (>= 0.16.0). 222s 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 222s Removing libpsl5:ppc64el (0.21.2-1build1) ... 222s Selecting previously unselected package libpsl5t64:ppc64el. 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70092 files and directories currently installed.) 222s Preparing to unpack .../libpsl5t64_0.21.2-1.1_ppc64el.deb ... 222s Unpacking libpsl5t64:ppc64el (0.21.2-1.1) ... 222s Preparing to unpack .../curl_8.5.0-2ubuntu7_ppc64el.deb ... 222s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70098 files and directories currently installed.) 222s Removing libcurl4:ppc64el (8.5.0-2ubuntu2) ... 222s Selecting previously unselected package libcurl4t64:ppc64el. 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70093 files and directories currently installed.) 222s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_ppc64el.deb ... 222s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 222s Selecting previously unselected package libc-dev-bin. 222s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 222s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 222s Selecting previously unselected package linux-libc-dev:ppc64el. 222s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 222s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 222s Selecting previously unselected package libcrypt-dev:ppc64el. 222s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 222s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 222s Selecting previously unselected package libtirpc-dev:ppc64el. 222s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 222s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 222s Selecting previously unselected package libnsl-dev:ppc64el. 222s Preparing to unpack .../005-libnsl-dev_1.3.0-3_ppc64el.deb ... 222s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 222s Selecting previously unselected package rpcsvc-proto. 222s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 222s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 222s Selecting previously unselected package libc6-dev:ppc64el. 222s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 222s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 222s Selecting previously unselected package libisl23:ppc64el. 222s Preparing to unpack .../008-libisl23_0.26-3_ppc64el.deb ... 222s Unpacking libisl23:ppc64el (0.26-3) ... 222s Selecting previously unselected package libmpc3:ppc64el. 222s Preparing to unpack .../009-libmpc3_1.3.1-1_ppc64el.deb ... 222s Unpacking libmpc3:ppc64el (1.3.1-1) ... 222s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 222s Preparing to unpack .../010-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 222s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 223s Selecting previously unselected package cpp-13. 223s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 223s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 223s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 223s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 223s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 223s Selecting previously unselected package cpp. 223s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 223s Unpacking cpp (4:13.2.0-7ubuntu1) ... 223s Selecting previously unselected package libcc1-0:ppc64el. 223s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libgomp1:ppc64el. 223s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libitm1:ppc64el. 223s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libatomic1:ppc64el. 223s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libasan8:ppc64el. 223s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package liblsan0:ppc64el. 223s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libtsan2:ppc64el. 223s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libubsan1:ppc64el. 223s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libquadmath0:ppc64el. 223s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 223s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 223s Selecting previously unselected package libgcc-13-dev:ppc64el. 223s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 223s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 223s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 223s Preparing to unpack .../024-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 223s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package gcc-13. 224s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 224s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 224s Preparing to unpack .../026-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 224s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 224s Selecting previously unselected package gcc. 224s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 224s Unpacking gcc (4:13.2.0-7ubuntu1) ... 224s Selecting previously unselected package libstdc++-13-dev:ppc64el. 224s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 224s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 224s Preparing to unpack .../029-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 224s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package g++-13. 224s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 224s Unpacking g++-13 (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package g++-powerpc64le-linux-gnu. 224s Preparing to unpack .../031-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 224s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 224s Selecting previously unselected package g++. 224s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 224s Unpacking g++ (4:13.2.0-7ubuntu1) ... 224s Selecting previously unselected package build-essential. 224s Preparing to unpack .../033-build-essential_12.10ubuntu1_ppc64el.deb ... 224s Unpacking build-essential (12.10ubuntu1) ... 224s Selecting previously unselected package dctrl-tools. 224s Preparing to unpack .../034-dctrl-tools_2.24-3build2_ppc64el.deb ... 224s Unpacking dctrl-tools (2.24-3build2) ... 224s Selecting previously unselected package fonts-dejavu-mono. 224s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 224s Unpacking fonts-dejavu-mono (2.37-8) ... 224s Selecting previously unselected package fonts-dejavu-core. 224s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 224s Unpacking fonts-dejavu-core (2.37-8) ... 224s Selecting previously unselected package fontconfig-config. 224s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 224s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 224s Selecting previously unselected package libfontconfig1:ppc64el. 224s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 224s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 224s Selecting previously unselected package fontconfig. 224s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 224s Unpacking fontconfig (2.15.0-1ubuntu1) ... 224s Selecting previously unselected package fonts-font-awesome. 224s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 224s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 224s Selecting previously unselected package fonts-glyphicons-halflings. 224s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 224s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 224s Selecting previously unselected package fonts-lmodern. 224s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 224s Unpacking fonts-lmodern (2.005-1) ... 225s Selecting previously unselected package fonts-mathjax. 225s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 225s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 225s Selecting previously unselected package libgfortran5:ppc64el. 225s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 225s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package libgfortran-13-dev:ppc64el. 225s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 225s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 225s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 225s Preparing to unpack .../046-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 225s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 225s Selecting previously unselected package gfortran-13. 225s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 225s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 225s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 225s Preparing to unpack .../048-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 225s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 225s Selecting previously unselected package gfortran. 225s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 225s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 225s Selecting previously unselected package icu-devtools. 225s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 225s Unpacking icu-devtools (74.2-1ubuntu1) ... 225s Selecting previously unselected package javascript-common. 225s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 225s Unpacking javascript-common (11+nmu1) ... 225s Selecting previously unselected package libio-string-perl. 225s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 225s Unpacking libio-string-perl (1.08-4) ... 225s Selecting previously unselected package liblatex-tounicode-perl. 225s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 225s Unpacking liblatex-tounicode-perl (0.54-2) ... 225s Selecting previously unselected package libbibtex-parser-perl. 225s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 225s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 225s Selecting previously unselected package libblas3:ppc64el. 225s Preparing to unpack .../055-libblas3_3.12.0-3_ppc64el.deb ... 225s Unpacking libblas3:ppc64el (3.12.0-3) ... 225s Selecting previously unselected package libblas-dev:ppc64el. 225s Preparing to unpack .../056-libblas-dev_3.12.0-3_ppc64el.deb ... 225s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 225s Selecting previously unselected package libboost1.83-dev:ppc64el. 225s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 225s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 228s Selecting previously unselected package libboost-dev:ppc64el. 228s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 228s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 228s Selecting previously unselected package libbz2-dev:ppc64el. 228s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 228s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 228s Selecting previously unselected package libpixman-1-0:ppc64el. 228s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_ppc64el.deb ... 228s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 228s Selecting previously unselected package libxcb-render0:ppc64el. 228s Preparing to unpack .../061-libxcb-render0_1.15-1_ppc64el.deb ... 228s Unpacking libxcb-render0:ppc64el (1.15-1) ... 228s Selecting previously unselected package libxcb-shm0:ppc64el. 228s Preparing to unpack .../062-libxcb-shm0_1.15-1_ppc64el.deb ... 228s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 228s Selecting previously unselected package libxrender1:ppc64el. 228s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 228s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 228s Selecting previously unselected package libcairo2:ppc64el. 228s Preparing to unpack .../064-libcairo2_1.18.0-1_ppc64el.deb ... 228s Unpacking libcairo2:ppc64el (1.18.0-1) ... 228s Selecting previously unselected package libdatrie1:ppc64el. 228s Preparing to unpack .../065-libdatrie1_0.2.13-3_ppc64el.deb ... 228s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 228s Selecting previously unselected package libdeflate0:ppc64el. 228s Preparing to unpack .../066-libdeflate0_1.19-1_ppc64el.deb ... 228s Unpacking libdeflate0:ppc64el (1.19-1) ... 228s Selecting previously unselected package libgraphite2-3:ppc64el. 228s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_ppc64el.deb ... 228s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 228s Selecting previously unselected package libharfbuzz0b:ppc64el. 228s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 228s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 228s Selecting previously unselected package x11-common. 228s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 228s Unpacking x11-common (1:7.7+23ubuntu2) ... 228s Selecting previously unselected package libice6:ppc64el. 228s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 228s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 228s Selecting previously unselected package libicu-dev:ppc64el. 228s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 228s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 229s Selecting previously unselected package libjpeg-turbo8:ppc64el. 229s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 229s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 229s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 229s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 229s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 229s Selecting previously unselected package libjpeg8:ppc64el. 229s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 229s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 229s Selecting previously unselected package libjpeg8-dev:ppc64el. 229s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 229s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 229s Selecting previously unselected package libjpeg-dev:ppc64el. 229s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 229s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 229s Selecting previously unselected package libjs-bootstrap. 229s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 229s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 229s Selecting previously unselected package libjs-popper.js. 229s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 229s Unpacking libjs-popper.js (1.16.1+ds-6) ... 229s Selecting previously unselected package libjs-bootstrap4. 229s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 229s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 229s Selecting previously unselected package libjs-d3. 229s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 229s Unpacking libjs-d3 (3.5.17-4) ... 229s Selecting previously unselected package libjs-es5-shim. 229s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 229s Unpacking libjs-es5-shim (4.6.7-2) ... 229s Selecting previously unselected package libjs-highlight.js. 229s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 229s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 229s Selecting previously unselected package libjs-jquery. 229s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 229s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 229s Selecting previously unselected package libjs-jquery-datatables. 229s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 229s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 229s Selecting previously unselected package libjs-jquery-datatables-extensions. 229s Preparing to unpack .../085-libjs-jquery-datatables-extensions_0.0+git20150910.28fd64e+dfsg-5_all.deb ... 229s Unpacking libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 229s Selecting previously unselected package libjs-sifter.js. 229s Preparing to unpack .../086-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 229s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 229s Selecting previously unselected package libjs-microplugin.js. 229s Preparing to unpack .../087-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 229s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 229s Selecting previously unselected package libjs-jquery-selectize.js. 229s Preparing to unpack .../088-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 229s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 229s Selecting previously unselected package libjs-jquery-ui. 229s Preparing to unpack .../089-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 229s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 229s Selecting previously unselected package libjs-json. 229s Preparing to unpack .../090-libjs-json_0~20221030+~1.0.8-1_all.deb ... 229s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 229s Selecting previously unselected package libjs-lunr. 229s Preparing to unpack .../091-libjs-lunr_2.3.9~dfsg-2_all.deb ... 229s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 229s Selecting previously unselected package libjs-prettify. 229s Preparing to unpack .../092-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 229s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 229s Selecting previously unselected package libkpathsea6:ppc64el. 229s Preparing to unpack .../093-libkpathsea6_2023.20230311.66589-9_ppc64el.deb ... 229s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9) ... 229s Selecting previously unselected package liblapack3:ppc64el. 229s Preparing to unpack .../094-liblapack3_3.12.0-3_ppc64el.deb ... 229s Unpacking liblapack3:ppc64el (3.12.0-3) ... 230s Selecting previously unselected package liblapack-dev:ppc64el. 230s Preparing to unpack .../095-liblapack-dev_3.12.0-3_ppc64el.deb ... 230s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 230s Selecting previously unselected package liblerc4:ppc64el. 230s Preparing to unpack .../096-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 230s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 230s Selecting previously unselected package libncurses-dev:ppc64el. 230s Preparing to unpack .../097-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 230s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 230s Selecting previously unselected package libthai-data. 230s Preparing to unpack .../098-libthai-data_0.1.29-2_all.deb ... 230s Unpacking libthai-data (0.1.29-2) ... 230s Selecting previously unselected package libthai0:ppc64el. 230s Preparing to unpack .../099-libthai0_0.1.29-2_ppc64el.deb ... 230s Unpacking libthai0:ppc64el (0.1.29-2) ... 230s Selecting previously unselected package libpango-1.0-0:ppc64el. 230s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 230s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 230s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 230s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 230s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 230s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 230s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 230s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 230s Selecting previously unselected package libpaper1:ppc64el. 230s Preparing to unpack .../103-libpaper1_1.1.29_ppc64el.deb ... 230s Unpacking libpaper1:ppc64el (1.1.29) ... 230s Selecting previously unselected package libpaper-utils. 230s Preparing to unpack .../104-libpaper-utils_1.1.29_ppc64el.deb ... 230s Unpacking libpaper-utils (1.1.29) ... 230s Selecting previously unselected package libpcre2-16-0:ppc64el. 230s Preparing to unpack .../105-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 230s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 230s Selecting previously unselected package libpcre2-32-0:ppc64el. 230s Preparing to unpack .../106-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 230s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 230s Selecting previously unselected package libpcre2-posix3:ppc64el. 230s Preparing to unpack .../107-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 230s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 230s Selecting previously unselected package libpcre2-dev:ppc64el. 230s Preparing to unpack .../108-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 230s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 230s Selecting previously unselected package libpkgconf3:ppc64el. 230s Preparing to unpack .../109-libpkgconf3_1.8.1-2_ppc64el.deb ... 230s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 230s Selecting previously unselected package zlib1g-dev:ppc64el. 230s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 230s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 230s Selecting previously unselected package libpng-dev:ppc64el. 230s Preparing to unpack .../111-libpng-dev_1.6.43-1_ppc64el.deb ... 230s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 230s Selecting previously unselected package libpotrace0:ppc64el. 230s Preparing to unpack .../112-libpotrace0_1.16-2_ppc64el.deb ... 230s Unpacking libpotrace0:ppc64el (1.16-2) ... 230s Selecting previously unselected package libptexenc1:ppc64el. 230s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_ppc64el.deb ... 230s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9) ... 230s Selecting previously unselected package libreadline-dev:ppc64el. 230s Preparing to unpack .../114-libreadline-dev_8.2-3_ppc64el.deb ... 230s Unpacking libreadline-dev:ppc64el (8.2-3) ... 230s Selecting previously unselected package libsharpyuv0:ppc64el. 230s Preparing to unpack .../115-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 230s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 230s Selecting previously unselected package libsm6:ppc64el. 230s Preparing to unpack .../116-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 230s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 230s Selecting previously unselected package libsynctex2:ppc64el. 230s Preparing to unpack .../117-libsynctex2_2023.20230311.66589-9_ppc64el.deb ... 230s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9) ... 230s Selecting previously unselected package libtcl8.6:ppc64el. 230s Preparing to unpack .../118-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 230s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 230s Selecting previously unselected package libteckit0:ppc64el. 230s Preparing to unpack .../119-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 230s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 230s Selecting previously unselected package libtexlua53-5:ppc64el. 230s Preparing to unpack .../120-libtexlua53-5_2023.20230311.66589-9_ppc64el.deb ... 230s Unpacking libtexlua53-5:ppc64el (2023.20230311.66589-9) ... 230s Selecting previously unselected package libjbig0:ppc64el. 230s Preparing to unpack .../121-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 230s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 230s Selecting previously unselected package libwebp7:ppc64el. 230s Preparing to unpack .../122-libwebp7_1.3.2-0.4_ppc64el.deb ... 230s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 230s Selecting previously unselected package libtiff6:ppc64el. 230s Preparing to unpack .../123-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 230s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 230s Selecting previously unselected package libxft2:ppc64el. 230s Preparing to unpack .../124-libxft2_2.3.6-1_ppc64el.deb ... 230s Unpacking libxft2:ppc64el (2.3.6-1) ... 230s Selecting previously unselected package libxss1:ppc64el. 230s Preparing to unpack .../125-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 230s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 230s Selecting previously unselected package libtk8.6:ppc64el. 230s Preparing to unpack .../126-libtk8.6_8.6.13-2_ppc64el.deb ... 230s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 230s Selecting previously unselected package libxt6:ppc64el. 230s Preparing to unpack .../127-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 230s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 231s Selecting previously unselected package libxmu6:ppc64el. 231s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_ppc64el.deb ... 231s Unpacking libxmu6:ppc64el (2:1.1.3-3) ... 231s Selecting previously unselected package libxpm4:ppc64el. 231s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 231s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 231s Selecting previously unselected package libxaw7:ppc64el. 231s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_ppc64el.deb ... 231s Unpacking libxaw7:ppc64el (2:1.0.14-1) ... 231s Selecting previously unselected package libxi6:ppc64el. 231s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_ppc64el.deb ... 231s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 231s Selecting previously unselected package libzzip-0-13:ppc64el. 231s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_ppc64el.deb ... 231s Unpacking libzzip-0-13:ppc64el (0.13.72+dfsg.1-1.1) ... 231s Selecting previously unselected package node-bootstrap-sass. 231s Preparing to unpack .../133-node-bootstrap-sass_3.4.3-2_all.deb ... 231s Unpacking node-bootstrap-sass (3.4.3-2) ... 231s Selecting previously unselected package node-html5shiv. 231s Preparing to unpack .../134-node-html5shiv_3.7.3+dfsg-5_all.deb ... 231s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 231s Selecting previously unselected package node-normalize.css. 231s Preparing to unpack .../135-node-normalize.css_8.0.1-5_all.deb ... 231s Unpacking node-normalize.css (8.0.1-5) ... 231s Selecting previously unselected package pandoc-data. 231s Preparing to unpack .../136-pandoc-data_3.1.3-1_all.deb ... 231s Unpacking pandoc-data (3.1.3-1) ... 231s Selecting previously unselected package pandoc. 231s Preparing to unpack .../137-pandoc_3.1.3+ds-2_ppc64el.deb ... 231s Unpacking pandoc (3.1.3+ds-2) ... 232s Selecting previously unselected package pkgconf-bin. 232s Preparing to unpack .../138-pkgconf-bin_1.8.1-2_ppc64el.deb ... 232s Unpacking pkgconf-bin (1.8.1-2) ... 232s Selecting previously unselected package pkgconf:ppc64el. 232s Preparing to unpack .../139-pkgconf_1.8.1-2_ppc64el.deb ... 232s Unpacking pkgconf:ppc64el (1.8.1-2) ... 232s Selecting previously unselected package pkg-config:ppc64el. 232s Preparing to unpack .../140-pkg-config_1.8.1-2_ppc64el.deb ... 232s Unpacking pkg-config:ppc64el (1.8.1-2) ... 232s Selecting previously unselected package zip. 232s Preparing to unpack .../141-zip_3.0-13_ppc64el.deb ... 232s Unpacking zip (3.0-13) ... 232s Selecting previously unselected package unzip. 232s Preparing to unpack .../142-unzip_6.0-28ubuntu3_ppc64el.deb ... 232s Unpacking unzip (6.0-28ubuntu3) ... 232s Selecting previously unselected package xdg-utils. 232s Preparing to unpack .../143-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 232s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 232s Selecting previously unselected package r-base-core. 232s Preparing to unpack .../144-r-base-core_4.3.2-1build1_ppc64el.deb ... 232s Unpacking r-base-core (4.3.2-1build1) ... 232s Selecting previously unselected package liblzma-dev:ppc64el. 232s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 232s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 232s Selecting previously unselected package r-base-dev. 232s Preparing to unpack .../146-r-base-dev_4.3.2-1build1_all.deb ... 232s Unpacking r-base-dev (4.3.2-1build1) ... 232s Selecting previously unselected package pkg-r-autopkgtest. 232s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 232s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 232s Selecting previously unselected package r-bioc-biocgenerics. 232s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 232s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 232s Selecting previously unselected package r-bioc-biobase. 232s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 232s Unpacking r-bioc-biobase (2.62.0-1) ... 233s Selecting previously unselected package r-bioc-s4vectors. 233s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 233s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 233s Selecting previously unselected package r-bioc-iranges. 233s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 233s Unpacking r-bioc-iranges (2.36.0-1) ... 233s Selecting previously unselected package r-cran-dbi. 233s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 233s Unpacking r-cran-dbi (1.2.2-1) ... 233s Selecting previously unselected package r-cran-bit. 233s Preparing to unpack .../153-r-cran-bit_4.0.5-1_ppc64el.deb ... 233s Unpacking r-cran-bit (4.0.5-1) ... 233s Selecting previously unselected package r-cran-bit64. 233s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_ppc64el.deb ... 233s Unpacking r-cran-bit64 (4.0.5-1) ... 233s Selecting previously unselected package r-cran-rlang. 233s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_ppc64el.deb ... 233s Unpacking r-cran-rlang (1.1.3-1) ... 233s Selecting previously unselected package r-cran-cli. 233s Preparing to unpack .../156-r-cran-cli_3.6.2-1_ppc64el.deb ... 233s Unpacking r-cran-cli (3.6.2-1) ... 233s Selecting previously unselected package r-cran-glue. 233s Preparing to unpack .../157-r-cran-glue_1.7.0-1_ppc64el.deb ... 233s Unpacking r-cran-glue (1.7.0-1) ... 233s Selecting previously unselected package r-cran-lifecycle. 233s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 233s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 233s Selecting previously unselected package r-cran-vctrs. 233s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 233s Unpacking r-cran-vctrs (0.6.5-1) ... 233s Selecting previously unselected package r-cran-blob. 233s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 233s Unpacking r-cran-blob (1.2.4-1) ... 233s Selecting previously unselected package r-cran-fastmap. 233s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 233s Unpacking r-cran-fastmap (1.1.1-1) ... 233s Selecting previously unselected package r-cran-cachem. 233s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_ppc64el.deb ... 233s Unpacking r-cran-cachem (1.0.8-1) ... 233s Selecting previously unselected package r-cran-memoise. 233s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 233s Unpacking r-cran-memoise (2.0.1-1) ... 233s Selecting previously unselected package r-cran-pkgconfig. 233s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 233s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 233s Selecting previously unselected package r-cran-plogr. 233s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 233s Unpacking r-cran-plogr (0.2.0-3build1) ... 233s Selecting previously unselected package r-cran-cpp11. 233s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 233s Unpacking r-cran-cpp11 (0.4.7-1) ... 233s Selecting previously unselected package r-cran-rsqlite. 233s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 233s Unpacking r-cran-rsqlite (2.3.4-1) ... 233s Selecting previously unselected package r-cran-curl. 233s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 233s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 233s Selecting previously unselected package r-cran-jsonlite. 233s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 233s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 233s Selecting previously unselected package r-cran-mime. 233s Preparing to unpack .../170-r-cran-mime_0.12-1_ppc64el.deb ... 233s Unpacking r-cran-mime (0.12-1) ... 233s Selecting previously unselected package r-cran-sys. 233s Preparing to unpack .../171-r-cran-sys_3.4.2-1_ppc64el.deb ... 233s Unpacking r-cran-sys (3.4.2-1) ... 233s Selecting previously unselected package r-cran-askpass. 233s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_ppc64el.deb ... 233s Unpacking r-cran-askpass (1.2.0-1) ... 233s Selecting previously unselected package r-cran-openssl. 233s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 233s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 233s Selecting previously unselected package r-cran-r6. 233s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 233s Unpacking r-cran-r6 (2.5.1-1) ... 233s Selecting previously unselected package r-cran-httr. 233s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 233s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 233s Selecting previously unselected package r-cran-png. 233s Preparing to unpack .../176-r-cran-png_0.1-8-1_ppc64el.deb ... 233s Unpacking r-cran-png (0.1-8-1) ... 233s Selecting previously unselected package r-bioc-zlibbioc. 233s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 233s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 233s Selecting previously unselected package r-bioc-xvector. 233s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 233s Unpacking r-bioc-xvector (0.42.0-1) ... 233s Selecting previously unselected package r-cran-bitops. 233s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_ppc64el.deb ... 233s Unpacking r-cran-bitops (1.0-7-1) ... 234s Selecting previously unselected package r-cran-rcurl. 234s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 234s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 234s Selecting previously unselected package r-bioc-genomeinfodbdata. 234s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 234s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 234s Selecting previously unselected package r-bioc-genomeinfodb. 234s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 234s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 234s Selecting previously unselected package r-cran-crayon. 234s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 234s Unpacking r-cran-crayon (1.5.2-1) ... 234s Selecting previously unselected package r-bioc-biostrings. 234s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 234s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 234s Selecting previously unselected package r-bioc-keggrest. 234s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 234s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 234s Selecting previously unselected package r-bioc-annotationdbi. 234s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 234s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 234s Selecting previously unselected package r-cran-generics. 234s Preparing to unpack .../187-r-cran-generics_0.1.3-1_all.deb ... 234s Unpacking r-cran-generics (0.1.3-1) ... 234s Selecting previously unselected package r-cran-magrittr. 234s Preparing to unpack .../188-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 234s Unpacking r-cran-magrittr (2.0.3-1) ... 234s Selecting previously unselected package r-cran-fansi. 234s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_ppc64el.deb ... 234s Unpacking r-cran-fansi (1.0.5-1) ... 234s Selecting previously unselected package r-cran-utf8. 234s Preparing to unpack .../190-r-cran-utf8_1.2.4-1_ppc64el.deb ... 234s Unpacking r-cran-utf8 (1.2.4-1) ... 234s Selecting previously unselected package r-cran-pillar. 234s Preparing to unpack .../191-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 234s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 234s Selecting previously unselected package r-cran-tibble. 234s Preparing to unpack .../192-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 234s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 234s Selecting previously unselected package r-cran-withr. 234s Preparing to unpack .../193-r-cran-withr_2.5.0-1_all.deb ... 234s Unpacking r-cran-withr (2.5.0-1) ... 234s Selecting previously unselected package r-cran-tidyselect. 234s Preparing to unpack .../194-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 234s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 234s Selecting previously unselected package r-cran-dplyr. 234s Preparing to unpack .../195-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 234s Unpacking r-cran-dplyr (1.1.4-1) ... 234s Selecting previously unselected package r-cran-purrr. 234s Preparing to unpack .../196-r-cran-purrr_1.0.2-1_ppc64el.deb ... 234s Unpacking r-cran-purrr (1.0.2-1) ... 234s Selecting previously unselected package r-cran-stringi. 234s Preparing to unpack .../197-r-cran-stringi_1.8.3-1_ppc64el.deb ... 234s Unpacking r-cran-stringi (1.8.3-1) ... 234s Selecting previously unselected package r-cran-stringr. 234s Preparing to unpack .../198-r-cran-stringr_1.5.1-1_all.deb ... 234s Unpacking r-cran-stringr (1.5.1-1) ... 234s Selecting previously unselected package r-cran-tidyr. 234s Preparing to unpack .../199-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 234s Unpacking r-cran-tidyr (1.3.1-1) ... 234s Selecting previously unselected package r-cran-dbplyr. 234s Preparing to unpack .../200-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 234s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 234s Selecting previously unselected package r-cran-filelock. 234s Preparing to unpack .../201-r-cran-filelock_1.0.3-1_ppc64el.deb ... 234s Unpacking r-cran-filelock (1.0.3-1) ... 234s Selecting previously unselected package r-bioc-biocfilecache. 234s Preparing to unpack .../202-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 234s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 234s Selecting previously unselected package r-cran-biocmanager. 234s Preparing to unpack .../203-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 234s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 234s Selecting previously unselected package r-bioc-biocversion. 235s Preparing to unpack .../204-r-bioc-biocversion_3.18.1-1_all.deb ... 235s Unpacking r-bioc-biocversion (3.18.1-1) ... 235s Selecting previously unselected package r-cran-rappdirs. 235s Preparing to unpack .../205-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 235s Unpacking r-cran-rappdirs (0.3.3-1) ... 235s Selecting previously unselected package r-cran-yaml. 235s Preparing to unpack .../206-r-cran-yaml_2.3.8-1_ppc64el.deb ... 235s Unpacking r-cran-yaml (2.3.8-1) ... 235s Selecting previously unselected package r-cran-littler. 235s Preparing to unpack .../207-r-cran-littler_0.3.19-1_ppc64el.deb ... 235s Unpacking r-cran-littler (0.3.19-1) ... 235s Selecting previously unselected package r-cran-pkgkitten. 235s Preparing to unpack .../208-r-cran-pkgkitten_0.2.3-1_all.deb ... 235s Unpacking r-cran-pkgkitten (0.2.3-1) ... 235s Selecting previously unselected package r-cran-rcpp. 235s Preparing to unpack .../209-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 235s Unpacking r-cran-rcpp (1.0.12-1) ... 235s Selecting previously unselected package r-cran-later. 235s Preparing to unpack .../210-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 235s Unpacking r-cran-later (1.3.2+dfsg-1) ... 235s Selecting previously unselected package r-cran-promises. 235s Preparing to unpack .../211-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 235s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 235s Selecting previously unselected package r-cran-httpuv. 235s Preparing to unpack .../212-r-cran-httpuv_1.6.14+dfsg-1_ppc64el.deb ... 235s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 235s Selecting previously unselected package r-cran-xtable. 235s Preparing to unpack .../213-r-cran-xtable_1%3a1.8-4-2_all.deb ... 235s Unpacking r-cran-xtable (1:1.8-4-2) ... 235s Selecting previously unselected package r-cran-base64enc. 235s Preparing to unpack .../214-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 235s Unpacking r-cran-base64enc (0.1-3-3) ... 235s Selecting previously unselected package r-cran-digest. 235s Preparing to unpack .../215-r-cran-digest_0.6.34-1_ppc64el.deb ... 235s Unpacking r-cran-digest (0.6.34-1) ... 235s Selecting previously unselected package r-cran-ellipsis. 235s Preparing to unpack .../216-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 235s Unpacking r-cran-ellipsis (0.3.2-2) ... 235s Selecting previously unselected package r-cran-htmltools. 235s Preparing to unpack .../217-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 235s Unpacking r-cran-htmltools (0.5.7-1) ... 235s Selecting previously unselected package r-cran-fontawesome. 235s Preparing to unpack .../218-r-cran-fontawesome_0.5.2-1_all.deb ... 235s Unpacking r-cran-fontawesome (0.5.2-1) ... 235s Selecting previously unselected package r-cran-sourcetools. 235s Preparing to unpack .../219-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 235s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 235s Selecting previously unselected package r-cran-commonmark. 235s Preparing to unpack .../220-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 235s Unpacking r-cran-commonmark (1.9.1-1) ... 235s Selecting previously unselected package r-cran-jquerylib. 235s Preparing to unpack .../221-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 235s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 235s Selecting previously unselected package r-cran-fs. 235s Preparing to unpack .../222-r-cran-fs_1.6.3+dfsg-1_ppc64el.deb ... 235s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 235s Selecting previously unselected package r-cran-sass. 235s Preparing to unpack .../223-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 235s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 235s Selecting previously unselected package r-cran-bslib. 235s Preparing to unpack .../224-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 235s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 235s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 235s Preparing to unpack .../225-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 235s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 235s Selecting previously unselected package r-cran-shiny. 235s Preparing to unpack .../226-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 235s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 236s Selecting previously unselected package r-cran-evaluate. 236s Preparing to unpack .../227-r-cran-evaluate_0.23-1_all.deb ... 236s Unpacking r-cran-evaluate (0.23-1) ... 236s Selecting previously unselected package r-cran-xfun. 236s Preparing to unpack .../228-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 236s Unpacking r-cran-xfun (0.41+dfsg-1) ... 236s Selecting previously unselected package r-cran-highr. 236s Preparing to unpack .../229-r-cran-highr_0.10+dfsg-1_all.deb ... 236s Unpacking r-cran-highr (0.10+dfsg-1) ... 236s Selecting previously unselected package libjs-mathjax. 236s Preparing to unpack .../230-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 236s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 236s Selecting previously unselected package r-cran-knitr. 236s Preparing to unpack .../231-r-cran-knitr_1.45+dfsg-1_all.deb ... 236s Unpacking r-cran-knitr (1.45+dfsg-1) ... 236s Selecting previously unselected package r-cran-tinytex. 236s Preparing to unpack .../232-r-cran-tinytex_0.49-1_all.deb ... 236s Unpacking r-cran-tinytex (0.49-1) ... 236s Selecting previously unselected package libjs-modernizr. 236s Preparing to unpack .../233-libjs-modernizr_2.6.2+ds1-5_all.deb ... 236s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 236s Selecting previously unselected package r-cran-rmarkdown. 236s Preparing to unpack .../234-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 236s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 237s Selecting previously unselected package r-cran-htmlwidgets. 237s Preparing to unpack .../235-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 237s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 237s Selecting previously unselected package r-cran-lazyeval. 237s Preparing to unpack .../236-r-cran-lazyeval_0.2.2-1build1_ppc64el.deb ... 237s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 237s Selecting previously unselected package r-cran-crosstalk. 237s Preparing to unpack .../237-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 237s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 237s Selecting previously unselected package r-cran-dt. 237s Preparing to unpack .../238-r-cran-dt_0.31+dfsg-1_all.deb ... 237s Unpacking r-cran-dt (0.31+dfsg-1) ... 237s Selecting previously unselected package r-bioc-interactivedisplaybase. 237s Preparing to unpack .../239-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 237s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 237s Selecting previously unselected package r-bioc-annotationhub. 237s Preparing to unpack .../240-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 237s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 237s Selecting previously unselected package r-bioc-biocio. 237s Preparing to unpack .../241-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 237s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 237s Selecting previously unselected package r-cran-formatr. 237s Preparing to unpack .../242-r-cran-formatr_1.14-1_all.deb ... 237s Unpacking r-cran-formatr (1.14-1) ... 237s Selecting previously unselected package r-cran-lambda.r. 237s Preparing to unpack .../243-r-cran-lambda.r_1.2.4-2build1_all.deb ... 237s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 237s Selecting previously unselected package r-cran-futile.options. 237s Preparing to unpack .../244-r-cran-futile.options_1.0.1-3build1_all.deb ... 237s Unpacking r-cran-futile.options (1.0.1-3build1) ... 237s Selecting previously unselected package r-cran-futile.logger. 237s Preparing to unpack .../245-r-cran-futile.logger_1.4.3-4build1_all.deb ... 237s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 237s Selecting previously unselected package r-cran-snow. 237s Preparing to unpack .../246-r-cran-snow_1%3a0.4.4-2_all.deb ... 237s Unpacking r-cran-snow (1:0.4.4-2) ... 237s Selecting previously unselected package r-cran-codetools. 237s Preparing to unpack .../247-r-cran-codetools_0.2-19-1_all.deb ... 237s Unpacking r-cran-codetools (0.2-19-1) ... 237s Selecting previously unselected package r-cran-bh. 237s Preparing to unpack .../248-r-cran-bh_1.84.0-1_all.deb ... 237s Unpacking r-cran-bh (1.84.0-1) ... 237s Selecting previously unselected package r-bioc-biocparallel. 237s Preparing to unpack .../249-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 237s Unpacking r-bioc-biocparallel (1.36.0-1) ... 237s Selecting previously unselected package r-cran-bookdown. 237s Preparing to unpack .../250-r-cran-bookdown_0.37+dfsg-1_all.deb ... 237s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 237s Selecting previously unselected package tex-common. 237s Preparing to unpack .../251-tex-common_6.18_all.deb ... 237s Unpacking tex-common (6.18) ... 237s Selecting previously unselected package t1utils. 237s Preparing to unpack .../252-t1utils_1.41-4build2_ppc64el.deb ... 237s Unpacking t1utils (1.41-4build2) ... 237s Selecting previously unselected package texlive-binaries. 237s Preparing to unpack .../253-texlive-binaries_2023.20230311.66589-9_ppc64el.deb ... 237s Unpacking texlive-binaries (2023.20230311.66589-9) ... 237s Selecting previously unselected package texlive-base. 237s Preparing to unpack .../254-texlive-base_2023.20240207-1_all.deb ... 237s Unpacking texlive-base (2023.20240207-1) ... 239s Selecting previously unselected package texlive-latex-base. 239s Preparing to unpack .../255-texlive-latex-base_2023.20240207-1_all.deb ... 239s Unpacking texlive-latex-base (2023.20240207-1) ... 239s Selecting previously unselected package texlive-bibtex-extra. 239s Preparing to unpack .../256-texlive-bibtex-extra_2023.20240207-1_all.deb ... 239s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 242s Selecting previously unselected package r-bioc-biocstyle. 242s Preparing to unpack .../257-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 242s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 242s Selecting previously unselected package r-cran-xml. 242s Preparing to unpack .../258-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 242s Unpacking r-cran-xml (3.99-0.16.1-1) ... 242s Selecting previously unselected package r-cran-hms. 242s Preparing to unpack .../259-r-cran-hms_1.1.3-1_all.deb ... 242s Unpacking r-cran-hms (1.1.3-1) ... 242s Selecting previously unselected package r-cran-prettyunits. 242s Preparing to unpack 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r-bioc-rhtslib (2.4.1+dfsg-3build1) ... 242s Selecting previously unselected package r-bioc-rsamtools. 242s Preparing to unpack .../266-r-bioc-rsamtools_2.18.0+dfsg-1_ppc64el.deb ... 242s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 242s Selecting previously unselected package r-cran-matrixstats. 242s Preparing to unpack .../267-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 242s Unpacking r-cran-matrixstats (1.2.0-1) ... 242s Selecting previously unselected package r-bioc-matrixgenerics. 242s Preparing to unpack .../268-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 242s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 242s Selecting previously unselected package r-cran-lattice. 242s Preparing to unpack .../269-r-cran-lattice_0.22-5-1_ppc64el.deb ... 242s Unpacking r-cran-lattice (0.22-5-1) ... 242s Selecting previously unselected package r-cran-matrix. 242s Preparing to unpack .../270-r-cran-matrix_1.6-5-1_ppc64el.deb ... 242s Unpacking r-cran-matrix (1.6-5-1) ... 242s Selecting previously unselected package r-cran-abind. 242s Preparing to unpack .../271-r-cran-abind_1.4-5-2_all.deb ... 242s Unpacking r-cran-abind (1.4-5-2) ... 242s Selecting previously unselected package r-bioc-s4arrays. 242s Preparing to unpack .../272-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 242s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 242s Selecting previously unselected package r-bioc-sparsearray. 242s Preparing to unpack .../273-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 242s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 242s Selecting previously unselected package r-bioc-delayedarray. 242s Preparing to unpack .../274-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 242s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 242s Selecting previously unselected package r-bioc-summarizedexperiment. 242s Preparing to unpack .../275-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 242s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 242s Selecting previously unselected package r-bioc-genomicalignments. 242s Preparing to unpack .../276-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 242s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 242s Selecting previously unselected package r-cran-rjson. 242s Preparing to unpack .../277-r-cran-rjson_0.2.21-1_ppc64el.deb ... 242s Unpacking r-cran-rjson (0.2.21-1) ... 242s Selecting previously unselected package r-cran-restfulr. 242s Preparing to unpack .../278-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 242s Unpacking r-cran-restfulr (0.0.15-1) ... 242s Selecting previously unselected package r-bioc-rtracklayer. 242s Preparing to unpack .../279-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 242s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 242s Selecting previously unselected package r-bioc-bsgenome. 242s Preparing to unpack .../280-r-bioc-bsgenome_1.70.2-1_all.deb ... 242s Unpacking r-bioc-bsgenome (1.70.2-1) ... 243s Selecting previously unselected package r-bioc-genomicfeatures. 243s Preparing to unpack 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(2023.20230311.66589-9) ... 247s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 247s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 247s Setting up r-cran-lazyeval (0.2.2-1build1) ... 247s Setting up r-cran-commonmark (1.9.1-1) ... 247s Setting up r-cran-r6 (2.5.1-1) ... 247s Setting up r-cran-pkgkitten (0.2.3-1) ... 247s Setting up texlive-base (2023.20240207-1) ... 248s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 248s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 248s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 248s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 249s Setting up r-cran-magrittr (2.0.3-1) ... 249s Setting up r-cran-rappdirs (0.3.3-1) ... 249s Setting up r-cran-filelock (1.0.3-1) ... 249s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 249s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 249s Setting up r-cran-littler (0.3.19-1) ... 249s Setting up r-cran-bh (1.84.0-1) ... 249s Setting up r-cran-fs (1.6.3+dfsg-1) ... 249s Setting up r-cran-rcpp (1.0.12-1) ... 249s Setting up r-cran-curl (5.2.0+dfsg-1) ... 249s Setting up r-cran-codetools (0.2-19-1) ... 249s Setting up g++-13 (13.2.0-17ubuntu2) ... 249s Setting up r-bioc-biocgenerics (0.48.1-2) ... 249s Setting up r-cran-rlang (1.1.3-1) ... 249s Setting up r-cran-matrixstats (1.2.0-1) ... 249s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 249s Setting up r-cran-xfun (0.41+dfsg-1) ... 249s Setting up r-cran-sys (3.4.2-1) ... 249s Setting up r-cran-plogr (0.2.0-3build1) ... 249s Setting up r-cran-withr (2.5.0-1) ... 249s Setting up r-cran-mime (0.12-1) ... 249s Setting up r-cran-generics (0.1.3-1) ... 249s Setting up r-cran-base64enc (0.1-3-3) ... 249s Setting up r-cran-abind (1.4-5-2) ... 249s Setting up r-cran-digest (0.6.34-1) ... 249s Setting up r-cran-yaml (2.3.8-1) ... 249s Setting up r-cran-lambda.r (1.2.4-2build1) ... 249s Setting up r-cran-evaluate (0.23-1) ... 249s Setting up r-cran-dbi (1.2.2-1) ... 249s Setting up r-cran-highr (0.10+dfsg-1) ... 249s Setting up r-cran-prettyunits (1.2.0-1) ... 249s Setting up r-cran-fansi (1.0.5-1) ... 249s Setting up r-cran-mass (7.3-60.0.1-1) ... 249s Setting up r-cran-snow (1:0.4.4-2) ... 249s Setting up r-cran-glue (1.7.0-1) ... 249s Setting up r-cran-bit (4.0.5-1) ... 249s Setting up r-cran-xtable (1:1.8-4-2) ... 249s Setting up r-cran-cli (3.6.2-1) ... 249s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 249s Setting up r-cran-bitops (1.0-7-1) ... 249s Setting up r-bioc-biocversion (3.18.1-1) ... 249s Setting up r-cran-bit64 (4.0.5-1) ... 249s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 249s Setting up gcc (4:13.2.0-7ubuntu1) ... 249s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 249s Setting up r-cran-askpass (1.2.0-1) ... 249s Setting up r-cran-fastmap (1.1.1-1) ... 249s Setting up r-cran-png (0.1-8-1) ... 249s Setting up r-bioc-biobase (2.62.0-1) ... 249s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 249s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 249s Setting up r-cran-utf8 (1.2.4-1) ... 249s Setting up gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 249s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 249s Setting up r-cran-stringi (1.8.3-1) ... 249s Setting up texlive-latex-base (2023.20240207-1) ... 249s Setting up r-cran-cpp11 (0.4.7-1) ... 249s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 249s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 249s Setting up r-cran-isoband (0.2.7-1) ... 249s Setting up r-cran-runit (0.4.32-3) ... 249s Setting up r-cran-futile.logger (1.4.3-4build1) ... 249s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 249s Setting up r-cran-later (1.3.2+dfsg-1) ... 249s Setting up r-cran-matrix (1.6-5-1) ... 249s Setting up r-cran-tinytex (0.49-1) ... 249s Setting up r-cran-knitr (1.45+dfsg-1) ... 249s Setting up r-cran-mgcv (1.9-1-1) ... 249s Setting up g++ (4:13.2.0-7ubuntu1) ... 249s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 249s Setting up r-cran-cachem (1.0.8-1) ... 249s Setting up build-essential (12.10ubuntu1) ... 249s Setting up r-bioc-iranges (2.36.0-1) ... 249s Setting up r-cran-rjson (0.2.21-1) ... 249s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 249s Setting up r-cran-restfulr (0.0.15-1) ... 249s Setting up r-cran-vctrs (0.6.5-1) ... 249s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 249s Setting up r-cran-ellipsis (0.3.2-2) ... 249s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 249s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 249s Setting up r-cran-stringr (1.5.1-1) ... 249s Setting up r-bioc-biocparallel (1.36.0-1) ... 249s Setting up r-bioc-rhtslib (2.4.1+dfsg-3build1) ... 249s Setting up r-cran-xml2 (1.3.6-1) ... 249s Setting up r-cran-munsell (0.5.0-2build1) ... 249s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 249s Setting up r-cran-survival (3.5-8-1) ... 249s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 249s Setting up gfortran (4:13.2.0-7ubuntu1) ... 249s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 249s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 249s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 249s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 249s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 249s Setting up r-bioc-snpstats (1.52.0+dfsg-1) ... 249s Setting up texlive-bibtex-extra (2023.20240207-1) ... 249s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 249s Setting up r-cran-httr (1.4.7+dfsg-1) ... 249s Setting up r-cran-hms (1.1.3-1) ... 249s Setting up r-cran-scales (1.3.0-1) ... 249s Setting up r-cran-memoise (2.0.1-1) ... 249s Setting up r-cran-promises (1.2.1+dfsg-1) ... 249s Setting up r-cran-purrr (1.0.2-1) ... 249s Setting up r-cran-blob (1.2.4-1) ... 249s Setting up r-cran-htmltools (0.5.7-1) ... 249s Setting up r-bioc-xvector (0.42.0-1) ... 249s Setting up r-cran-sass (0.4.8+dfsg-1) ... 249s Setting up r-cran-dplyr (1.1.4-1) ... 249s Setting up r-cran-rsqlite (2.3.4-1) ... 249s Setting up r-cran-progress (1.2.3-1) ... 249s Setting up r-base-dev (4.3.2-1build1) ... 249s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 249s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 249s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 249s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 249s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 249s Setting up r-cran-fontawesome (0.5.2-1) ... 249s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 249s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 249s Setting up r-cran-tidyr (1.3.1-1) ... 249s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 249s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 249s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 249s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 249s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 249s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 249s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 249s Setting up r-bioc-annotationdbi (1.64.1-1) ... 249s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 249s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 249s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 249s Setting up r-bioc-genomicalignments (1.38.2-1) ... 249s Setting up r-cran-bookdown (0.37+dfsg-1) ... 249s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 249s Setting up r-bioc-rtracklayer (1.62.0-1) ... 249s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 249s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 249s Setting up r-bioc-bsgenome (1.70.2-1) ... 249s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 249s Setting up r-cran-dt (0.31+dfsg-1) ... 249s Setting up r-bioc-variantannotation (1.48.1-1) ... 249s Setting up r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 249s Setting up r-bioc-annotationhub (3.10.0+dfsg-1) ... 249s Setting up autopkgtest-satdep (0) ... 249s Processing triggers for man-db (2.12.0-3) ... 251s Processing triggers for install-info (7.1-3) ... 251s Processing triggers for libc-bin (2.39-0ubuntu2) ... 251s Processing triggers for tex-common (6.18) ... 251s Running updmap-sys. This may take some time... done. 251s Running mktexlsr /var/lib/texmf ... done. 251s Building format(s) --all. 302s This may take some time... done. 311s (Reading database ... 121715 files and directories currently installed.) 311s Removing autopkgtest-satdep (0) ... 312s autopkgtest [21:27:00]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 312s autopkgtest [21:27:00]: test pkg-r-autopkgtest: [----------------------- 312s Test: Try to load the R library VariantAnnotation 312s 312s R version 4.3.2 (2023-10-31) -- "Eye Holes" 312s Copyright (C) 2023 The R Foundation for Statistical Computing 312s Platform: powerpc64le-unknown-linux-gnu (64-bit) 312s 312s R is free software and comes with ABSOLUTELY NO WARRANTY. 312s You are welcome to redistribute it under certain conditions. 312s Type 'license()' or 'licence()' for distribution details. 312s 312s R is a collaborative project with many contributors. 312s Type 'contributors()' for more information and 312s 'citation()' on how to cite R or R packages in publications. 312s 312s Type 'demo()' for some demos, 'help()' for on-line help, or 312s 'help.start()' for an HTML browser interface to help. 312s Type 'q()' to quit R. 312s 312s > library('VariantAnnotation') 312s Loading required package: BiocGenerics 312s 312s Attaching package: ‘BiocGenerics’ 312s 312s The following objects are masked from ‘package:stats’: 312s 312s IQR, mad, sd, var, xtabs 312s 312s The following objects are masked from ‘package:base’: 312s 312s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 312s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 312s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 312s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 312s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 312s table, tapply, union, unique, unsplit, which.max, which.min 312s 312s Loading required package: MatrixGenerics 312s Loading required package: matrixStats 313s 313s Attaching package: ‘MatrixGenerics’ 313s 313s The following objects are masked from ‘package:matrixStats’: 313s 313s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 313s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 313s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 313s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 313s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 313s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 313s colWeightedMeans, colWeightedMedians, colWeightedSds, 313s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 313s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 313s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 313s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 313s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 313s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 313s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 313s rowWeightedSds, rowWeightedVars 313s 313s Loading required package: GenomeInfoDb 313s Loading required package: S4Vectors 313s Loading required package: stats4 313s 313s Attaching package: ‘S4Vectors’ 313s 313s The following object is masked from ‘package:utils’: 313s 313s findMatches 313s 313s The following objects are masked from ‘package:base’: 313s 313s expand.grid, I, unname 313s 313s Loading required package: IRanges 314s Loading required package: GenomicRanges 315s Loading required package: SummarizedExperiment 315s Loading required package: Biobase 315s Welcome to Bioconductor 315s 315s Vignettes contain introductory material; view with 315s 'browseVignettes()'. To cite Bioconductor, see 315s 'citation("Biobase")', and for packages 'citation("pkgname")'. 315s 315s 315s Attaching package: ‘Biobase’ 315s 315s The following object is masked from ‘package:MatrixGenerics’: 315s 315s rowMedians 315s 315s The following objects are masked from ‘package:matrixStats’: 315s 315s anyMissing, rowMedians 315s 318s Loading required package: Rsamtools 318s Loading required package: Biostrings 318s Loading required package: XVector 319s 319s Attaching package: ‘Biostrings’ 319s 319s The following object is masked from ‘package:base’: 319s 319s strsplit 319s 325s > 325s > 325s 325s Attaching package: ‘VariantAnnotation’ 325s 325s The following object is masked from ‘package:base’: 325s 325s tabulate 325s 325s Other tests are currently unsupported! 325s They will be progressively added. 325s autopkgtest [21:27:13]: test pkg-r-autopkgtest: -----------------------] 326s pkg-r-autopkgtest PASS 326s autopkgtest [21:27:14]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 326s autopkgtest [21:27:14]: @@@@@@@@@@@@@@@@@@@@ summary 326s pkg-r-autopkgtest PASS 337s Creating nova instance adt-noble-ppc64el-r-bioc-variantannotation-20240317-212148-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...