0s autopkgtest [21:46:54]: starting date and time: 2024-03-17 21:46:54+0000 0s autopkgtest [21:46:54]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:46:54]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ttni5jvf/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rsamtools,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-shortread --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-8.secgroup --name adt-noble-ppc64el-r-bioc-shortread-20240317-214654-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 79s autopkgtest [21:48:13]: testbed dpkg architecture: ppc64el 80s autopkgtest [21:48:14]: testbed apt version: 2.7.12 80s autopkgtest [21:48:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 80s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 81s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [484 kB] 81s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 81s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3676 kB] 82s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 82s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 82s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 82s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 82s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 82s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3974 kB] 82s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 82s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 82s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 85s Fetched 9012 kB in 3s (3347 kB/s) 85s Reading package lists... 88s Reading package lists... 88s Building dependency tree... 88s Reading state information... 88s Calculating upgrade... 88s The following packages will be REMOVED: 88s libssl3 88s The following NEW packages will be installed: 88s libssl3t64 88s The following packages have been kept back: 88s curl 88s The following packages will be upgraded: 88s openssl 88s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 88s Need to get 3195 kB of archives. 88s After this operation, 6144 B of additional disk space will be used. 88s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 89s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 89s Fetched 3195 kB in 1s (4536 kB/s) 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 89s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 89s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 89s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 89s wget depends on libssl3 (>= 3.0.0). 89s tnftp depends on libssl3 (>= 3.0.0). 89s tcpdump depends on libssl3 (>= 3.0.0). 89s systemd-resolved depends on libssl3 (>= 3.0.0). 89s systemd depends on libssl3 (>= 3.0.0). 89s sudo depends on libssl3 (>= 3.0.0). 89s rsync depends on libssl3 (>= 3.0.0). 90s python3-cryptography depends on libssl3 (>= 3.0.0). 90s openssh-server depends on libssl3 (>= 3.0.10). 90s openssh-client depends on libssl3 (>= 3.0.10). 90s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 90s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 90s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 90s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 90s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 90s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 90s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 90s libnvme1 depends on libssl3 (>= 3.0.0). 90s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 90s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 90s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 90s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 90s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 90s kmod depends on libssl3 (>= 3.0.0). 90s dhcpcd-base depends on libssl3 (>= 3.0.0). 90s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 90s 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 90s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 90s Selecting previously unselected package libssl3t64:ppc64el. 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 90s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 90s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 90s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 90s Setting up openssl (3.0.13-0ubuntu1) ... 90s Processing triggers for man-db (2.12.0-3) ... 90s Processing triggers for libc-bin (2.39-0ubuntu2) ... 90s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 91s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 91s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 91s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 91s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 92s Reading package lists... 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Calculating upgrade... 93s The following packages have been kept back: 93s curl 93s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 96s autopkgtest [21:48:30]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 96s autopkgtest [21:48:30]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-shortread 98s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (dsc) [2387 B] 98s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (tar) [5223 kB] 98s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (diff) [5876 B] 98s gpgv: Signature made Mon Dec 18 09:06:56 2023 UTC 98s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 98s gpgv: issuer "tille@debian.org" 98s gpgv: Can't check signature: No public key 98s dpkg-source: warning: cannot verify inline signature for ./r-bioc-shortread_1.60.0-2.dsc: no acceptable signature found 98s autopkgtest [21:48:32]: testing package r-bioc-shortread version 1.60.0-2 99s autopkgtest [21:48:33]: build not needed 100s autopkgtest [21:48:34]: test pkg-r-autopkgtest: preparing testbed 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s Starting pkgProblemResolver with broken count: 0 101s Starting 2 pkgProblemResolver with broken count: 0 101s Done 102s The following additional packages will be installed: 102s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 102s cpp-powerpc64le-linux-gnu curl dctrl-tools fontconfig fontconfig-config 102s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 102s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 102s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 102s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 102s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 102s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 102s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 102s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 102s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 102s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 102s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 102s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 102s libjs-highlight.js libjs-jquery libjs-jquery-datatables 102s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 102s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 102s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 102s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 102s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 102s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 102s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 102s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libquadmath0 libreadline-dev 102s libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 102s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 102s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 102s libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 102s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 102s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 102s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 102s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 102s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 102s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 102s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 102s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 102s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 102s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 102s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 102s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 102s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 102s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 102s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 102s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 102s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 102s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 102s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 102s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 102s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 102s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 102s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 102s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 102s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 102s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 102s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 102s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 102s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 102s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 102s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 102s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 102s Suggested packages: 102s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 102s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 102s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 102s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 102s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 102s libboost-context1.83-dev libboost-contract1.83-dev 102s libboost-coroutine1.83-dev libboost-date-time1.83-dev 102s libboost-exception1.83-dev libboost-fiber1.83-dev 102s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 102s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 102s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 102s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 102s libboost-numpy1.83-dev libboost-program-options1.83-dev 102s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 102s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 102s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 102s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 102s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 102s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 102s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 102s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 102s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 102s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 102s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 102s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 102s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all r-cran-testthat 102s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 102s r-cran-doparallel r-bioc-variantannotation r-cran-batchtools 102s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-bsgenome 102s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 102s r-cran-r.utils r-bioc-edger r-bioc-ensembldb r-bioc-annotationfilter 102s r-cran-markdown r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq 102s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff 102s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-polyclip r-cran-lubridate 102s r-cran-sp r-cran-ggplot2 r-cran-gridextra r-cran-scatterplot3d r-cran-getopt 102s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-scales 102s r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 102s r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio r-cran-callr 102s r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper 102s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 102s texlive-latex-base-doc wp2latex 102s Recommended packages: 102s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 102s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 102s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 102s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 102s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 102s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 102s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 102s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql 102s r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo 102s r-cran-cairo r-cran-markdown r-cran-ragg r-cran-readr r-cran-r.rsp r-cran-sf 102s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 102s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 102s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis 102s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 102s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 102s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 102s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 102s The following packages will be REMOVED: 102s libcurl4 libpsl5 102s The following NEW packages will be installed: 102s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 102s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 102s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 102s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 102s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 102s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 102s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 102s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 102s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 102s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 102s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 102s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 102s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 102s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 102s libjs-highlight.js libjs-jquery libjs-jquery-datatables 102s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 102s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 102s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 102s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 102s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 102s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 102s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 102s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libquadmath0 libreadline-dev 102s libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 102s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 102s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 102s libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 102s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 102s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 102s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 102s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 102s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 102s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 102s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 102s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 102s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 102s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 102s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 102s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 102s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 102s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 102s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 102s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 102s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 102s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 102s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 102s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 102s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 102s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 102s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 102s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 102s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 102s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 102s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 102s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 102s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 102s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 102s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 102s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 102s The following packages will be upgraded: 102s curl 102s 1 upgraded, 286 newly installed, 2 to remove and 0 not upgraded. 102s Need to get 435 MB/435 MB of archives. 102s After this operation, 1419 MB of additional disk space will be used. 102s Get:1 /tmp/autopkgtest.4Yei0P/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [760 B] 102s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1 [59.0 kB] 102s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu7 [234 kB] 102s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu7 [428 kB] 102s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 102s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 102s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 102s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 102s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 102s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 102s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 103s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 103s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 103s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 103s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 103s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 103s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 103s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 103s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 103s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 103s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 103s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 103s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 103s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 103s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 103s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 103s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 103s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 104s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 104s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 104s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 104s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 104s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 104s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 104s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 104s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 104s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 104s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 104s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 104s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 104s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 104s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 104s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 104s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 104s Get:45 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 104s Get:46 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 104s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 104s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 104s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 104s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 105s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 105s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 105s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 105s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 105s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 105s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 105s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 105s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 105s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 105s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 105s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 105s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 105s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 105s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 105s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 105s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 105s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 105s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 105s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 105s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 105s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 105s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 105s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 106s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 106s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 106s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 106s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 106s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 106s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 106s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 106s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 106s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 106s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 106s Get:84 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 106s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 106s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 106s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 106s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 106s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 106s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 106s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 106s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 106s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 106s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 106s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 106s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9 [71.2 kB] 106s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 106s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 106s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 106s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 106s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 106s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 106s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 107s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 107s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 107s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 107s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 107s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 107s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 107s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 107s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 107s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 107s Get:113 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 107s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 107s Get:115 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 107s Get:116 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9 [42.9 kB] 107s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 107s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 107s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 107s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9 [68.6 kB] 107s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 107s Get:122 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 107s Get:123 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9 [163 kB] 107s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 107s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 107s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 107s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 107s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 107s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 107s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 107s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3 [57.2 kB] 107s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 107s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1 [227 kB] 107s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 107s Get:135 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13 ppc64el 0.13.72+dfsg.1-1.1 [29.7 kB] 107s Get:136 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 107s Get:137 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 107s Get:138 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 107s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 109s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 109s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el littler all 0.3.19-1 [2472 B] 109s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 109s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 109s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 109s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 109s Get:146 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 111s Get:147 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 111s Get:148 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 111s Get:149 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 111s Get:150 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 111s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 111s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 111s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 111s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 111s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 111s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 111s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 111s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 111s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 111s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 111s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 111s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 111s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 111s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 111s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 111s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 111s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 111s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 111s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 111s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 111s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 111s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 112s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 112s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 112s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 112s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 112s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 112s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 112s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 112s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 112s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 112s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 112s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 112s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 112s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 112s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 113s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 113s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 113s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 114s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 114s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 114s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 114s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 114s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 114s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 114s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 114s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 114s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 114s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 114s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 114s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 114s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 114s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 114s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 115s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 115s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 115s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 115s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 115s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 115s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 115s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 115s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 115s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 115s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 115s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 115s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 115s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 115s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 115s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 115s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 115s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 115s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 115s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 115s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 115s Get:225 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 115s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 115s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 115s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1 [231 kB] 115s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 115s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 115s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 116s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 116s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 116s Get:234 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 116s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 116s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 116s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 116s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 116s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1 [527 kB] 116s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 116s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 116s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 116s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 116s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 116s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 116s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 116s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 116s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 116s Get:249 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 116s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9 [12.4 MB] 117s Get:251 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 117s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 117s Get:253 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 120s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 120s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 120s Get:256 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 120s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 120s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 120s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 120s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 120s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 120s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 120s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 120s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 120s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 120s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 120s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 120s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 120s Get:269 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 120s Get:270 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 120s Get:271 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-1 [1548 kB] 120s Get:272 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1build1 [3815 kB] 121s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 121s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 121s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 121s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 121s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 121s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hwriter all 1.3.2.1-1 [106 kB] 121s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jpeg ppc64el 0.1-10-1 [37.0 kB] 121s Get:280 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 121s Get:281 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-deldir ppc64el 2.0-4-1 [273 kB] 121s Get:282 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcppeigen ppc64el 0.3.3.9.4-1 [1216 kB] 121s Get:283 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-interp ppc64el 1.1-6-1 [1492 kB] 121s Get:284 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 121s Get:285 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-latticeextra all 0.6-30-1 [2198 kB] 121s Get:286 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-shortread ppc64el 1.60.0-2 [5208 kB] 121s Get:287 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 122s Preconfiguring packages ... 122s Fetched 435 MB in 19s (22.4 MB/s) 122s dpkg: libpsl5:ppc64el: dependency problems, but removing anyway as you requested: 122s wget depends on libpsl5 (>= 0.16.0). 122s libcurl4:ppc64el depends on libpsl5 (>= 0.16.0). 122s libcurl3-gnutls:ppc64el depends on libpsl5 (>= 0.16.0). 122s 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 122s Removing libpsl5:ppc64el (0.21.2-1build1) ... 122s Selecting previously unselected package libpsl5t64:ppc64el. 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70092 files and directories currently installed.) 122s Preparing to unpack .../libpsl5t64_0.21.2-1.1_ppc64el.deb ... 122s Unpacking libpsl5t64:ppc64el (0.21.2-1.1) ... 122s Preparing to unpack .../curl_8.5.0-2ubuntu7_ppc64el.deb ... 122s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70098 files and directories currently installed.) 122s Removing libcurl4:ppc64el (8.5.0-2ubuntu2) ... 122s Selecting previously unselected package libcurl4t64:ppc64el. 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70093 files and directories currently installed.) 122s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_ppc64el.deb ... 122s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 122s Selecting previously unselected package libc-dev-bin. 122s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 122s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 122s Selecting previously unselected package linux-libc-dev:ppc64el. 122s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 122s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 122s Selecting previously unselected package libcrypt-dev:ppc64el. 122s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 122s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 122s Selecting previously unselected package libtirpc-dev:ppc64el. 122s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 122s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 122s Selecting previously unselected package libnsl-dev:ppc64el. 122s Preparing to unpack .../005-libnsl-dev_1.3.0-3_ppc64el.deb ... 122s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 122s Selecting previously unselected package rpcsvc-proto. 122s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 122s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 123s Selecting previously unselected package libc6-dev:ppc64el. 123s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 123s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 123s Selecting previously unselected package libisl23:ppc64el. 123s Preparing to unpack .../008-libisl23_0.26-3_ppc64el.deb ... 123s Unpacking libisl23:ppc64el (0.26-3) ... 123s Selecting previously unselected package libmpc3:ppc64el. 123s Preparing to unpack .../009-libmpc3_1.3.1-1_ppc64el.deb ... 123s Unpacking libmpc3:ppc64el (1.3.1-1) ... 123s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 123s Preparing to unpack .../010-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 123s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 123s Selecting previously unselected package cpp-13. 123s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 123s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 123s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 123s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 123s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 123s Selecting previously unselected package cpp. 123s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 123s Unpacking cpp (4:13.2.0-7ubuntu1) ... 123s Selecting previously unselected package libcc1-0:ppc64el. 123s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libgomp1:ppc64el. 123s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libitm1:ppc64el. 123s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libatomic1:ppc64el. 123s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libasan8:ppc64el. 123s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package liblsan0:ppc64el. 123s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libtsan2:ppc64el. 123s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libubsan1:ppc64el. 123s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libquadmath0:ppc64el. 123s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 123s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 123s Selecting previously unselected package libgcc-13-dev:ppc64el. 123s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 123s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 123s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 123s Preparing to unpack .../024-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 123s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 124s Selecting previously unselected package gcc-13. 124s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 124s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 124s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 124s Preparing to unpack .../026-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 124s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 124s Selecting previously unselected package gcc. 124s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 124s Unpacking gcc (4:13.2.0-7ubuntu1) ... 124s Selecting previously unselected package libstdc++-13-dev:ppc64el. 124s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 124s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 124s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 124s Preparing to unpack .../029-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 124s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 125s Selecting previously unselected package g++-13. 125s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking g++-13 (13.2.0-17ubuntu2) ... 125s Selecting previously unselected package g++-powerpc64le-linux-gnu. 125s Preparing to unpack .../031-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 125s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 125s Selecting previously unselected package g++. 125s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 125s Unpacking g++ (4:13.2.0-7ubuntu1) ... 125s Selecting previously unselected package build-essential. 125s Preparing to unpack .../033-build-essential_12.10ubuntu1_ppc64el.deb ... 125s Unpacking build-essential (12.10ubuntu1) ... 125s Selecting previously unselected package dctrl-tools. 125s Preparing to unpack .../034-dctrl-tools_2.24-3build2_ppc64el.deb ... 125s Unpacking dctrl-tools (2.24-3build2) ... 125s Selecting previously unselected package fonts-dejavu-mono. 125s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 125s Unpacking fonts-dejavu-mono (2.37-8) ... 125s Selecting previously unselected package fonts-dejavu-core. 125s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 125s Unpacking fonts-dejavu-core (2.37-8) ... 125s Selecting previously unselected package fontconfig-config. 125s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 125s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 125s Selecting previously unselected package libfontconfig1:ppc64el. 125s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 125s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 125s Selecting previously unselected package fontconfig. 125s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 125s Unpacking fontconfig (2.15.0-1ubuntu1) ... 125s Selecting previously unselected package fonts-font-awesome. 125s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 125s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 125s Selecting previously unselected package fonts-glyphicons-halflings. 125s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 125s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 125s Selecting previously unselected package fonts-lmodern. 125s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 125s Unpacking fonts-lmodern (2.005-1) ... 125s Selecting previously unselected package fonts-mathjax. 125s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 125s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 125s Selecting previously unselected package libgfortran5:ppc64el. 125s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 125s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 125s Selecting previously unselected package libgfortran-13-dev:ppc64el. 125s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 125s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 125s Preparing to unpack .../046-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 126s Selecting previously unselected package gfortran-13. 126s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 126s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 126s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 126s Preparing to unpack .../048-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 126s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 126s Selecting previously unselected package gfortran. 126s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 126s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 126s Selecting previously unselected package icu-devtools. 126s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 126s Unpacking icu-devtools (74.2-1ubuntu1) ... 126s Selecting previously unselected package javascript-common. 126s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 126s Unpacking javascript-common (11+nmu1) ... 126s Selecting previously unselected package libio-string-perl. 126s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 126s Unpacking libio-string-perl (1.08-4) ... 126s Selecting previously unselected package liblatex-tounicode-perl. 126s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 126s Unpacking liblatex-tounicode-perl (0.54-2) ... 126s Selecting previously unselected package libbibtex-parser-perl. 126s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 126s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 126s Selecting previously unselected package libblas3:ppc64el. 126s Preparing to unpack .../055-libblas3_3.12.0-3_ppc64el.deb ... 126s Unpacking libblas3:ppc64el (3.12.0-3) ... 126s Selecting previously unselected package libblas-dev:ppc64el. 126s Preparing to unpack .../056-libblas-dev_3.12.0-3_ppc64el.deb ... 126s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 126s Selecting previously unselected package libboost1.83-dev:ppc64el. 126s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 126s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 129s Selecting previously unselected package libboost-dev:ppc64el. 129s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 129s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 129s Selecting previously unselected package libbz2-dev:ppc64el. 129s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 129s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 129s Selecting previously unselected package libpixman-1-0:ppc64el. 129s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_ppc64el.deb ... 129s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 129s Selecting previously unselected package libxcb-render0:ppc64el. 129s Preparing to unpack .../061-libxcb-render0_1.15-1_ppc64el.deb ... 129s Unpacking libxcb-render0:ppc64el (1.15-1) ... 129s Selecting previously unselected package libxcb-shm0:ppc64el. 129s Preparing to unpack .../062-libxcb-shm0_1.15-1_ppc64el.deb ... 129s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 129s Selecting previously unselected package libxrender1:ppc64el. 129s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 129s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 129s Selecting previously unselected package libcairo2:ppc64el. 129s Preparing to unpack .../064-libcairo2_1.18.0-1_ppc64el.deb ... 129s Unpacking libcairo2:ppc64el (1.18.0-1) ... 129s Selecting previously unselected package libdatrie1:ppc64el. 129s Preparing to unpack .../065-libdatrie1_0.2.13-3_ppc64el.deb ... 129s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 129s Selecting previously unselected package libdeflate0:ppc64el. 129s Preparing to unpack .../066-libdeflate0_1.19-1_ppc64el.deb ... 129s Unpacking libdeflate0:ppc64el (1.19-1) ... 129s Selecting previously unselected package libgraphite2-3:ppc64el. 129s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_ppc64el.deb ... 129s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 129s Selecting previously unselected package libharfbuzz0b:ppc64el. 129s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 129s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 129s Selecting previously unselected package x11-common. 129s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 129s Unpacking x11-common (1:7.7+23ubuntu2) ... 129s Selecting previously unselected package libice6:ppc64el. 129s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 129s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 129s Selecting previously unselected package libicu-dev:ppc64el. 129s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 129s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 130s Selecting previously unselected package libjpeg-turbo8:ppc64el. 130s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 130s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 130s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 130s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 130s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 130s Selecting previously unselected package libjpeg8:ppc64el. 130s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 130s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 130s Selecting previously unselected package libjpeg8-dev:ppc64el. 130s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 130s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 130s Selecting previously unselected package libjpeg-dev:ppc64el. 130s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 130s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 130s Selecting previously unselected package libjs-bootstrap. 130s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 130s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 130s Selecting previously unselected package libjs-popper.js. 130s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 130s Unpacking libjs-popper.js (1.16.1+ds-6) ... 130s Selecting previously unselected package libjs-bootstrap4. 130s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 130s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 130s Selecting previously unselected package libjs-d3. 130s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 130s Unpacking libjs-d3 (3.5.17-4) ... 130s Selecting previously unselected package libjs-es5-shim. 130s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 130s Unpacking libjs-es5-shim (4.6.7-2) ... 130s Selecting previously unselected package libjs-highlight.js. 130s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 130s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 130s Selecting previously unselected package libjs-jquery. 130s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 130s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 130s Selecting previously unselected package libjs-jquery-datatables. 130s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 130s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 130s Selecting previously unselected package libjs-sifter.js. 130s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 130s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 130s Selecting previously unselected package libjs-microplugin.js. 130s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 130s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 130s Selecting previously unselected package libjs-jquery-selectize.js. 130s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 130s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 130s Selecting previously unselected package libjs-jquery-ui. 130s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 130s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 130s Selecting previously unselected package libjs-json. 130s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 130s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 130s Selecting previously unselected package libjs-lunr. 130s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 130s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 130s Selecting previously unselected package libjs-prettify. 130s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 130s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 130s Selecting previously unselected package libkpathsea6:ppc64el. 130s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_ppc64el.deb ... 130s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9) ... 130s Selecting previously unselected package liblapack3:ppc64el. 130s Preparing to unpack .../093-liblapack3_3.12.0-3_ppc64el.deb ... 130s Unpacking liblapack3:ppc64el (3.12.0-3) ... 130s Selecting previously unselected package liblapack-dev:ppc64el. 130s Preparing to unpack .../094-liblapack-dev_3.12.0-3_ppc64el.deb ... 130s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 131s Selecting previously unselected package liblerc4:ppc64el. 131s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 131s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 131s Selecting previously unselected package libncurses-dev:ppc64el. 131s Preparing to unpack .../096-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 131s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 131s Selecting previously unselected package libthai-data. 131s Preparing to unpack .../097-libthai-data_0.1.29-2_all.deb ... 131s Unpacking libthai-data (0.1.29-2) ... 131s Selecting previously unselected package libthai0:ppc64el. 131s Preparing to unpack .../098-libthai0_0.1.29-2_ppc64el.deb ... 131s Unpacking libthai0:ppc64el (0.1.29-2) ... 131s Selecting previously unselected package libpango-1.0-0:ppc64el. 131s Preparing to unpack .../099-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 131s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 131s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 131s Preparing to unpack .../100-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 131s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 131s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 131s Preparing to unpack .../101-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 131s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 131s Selecting previously unselected package libpaper1:ppc64el. 131s Preparing to unpack .../102-libpaper1_1.1.29_ppc64el.deb ... 131s Unpacking libpaper1:ppc64el (1.1.29) ... 131s Selecting previously unselected package libpaper-utils. 131s Preparing to unpack .../103-libpaper-utils_1.1.29_ppc64el.deb ... 131s Unpacking libpaper-utils (1.1.29) ... 131s Selecting previously unselected package libpcre2-16-0:ppc64el. 131s Preparing to unpack .../104-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpcre2-32-0:ppc64el. 131s Preparing to unpack .../105-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpcre2-posix3:ppc64el. 131s Preparing to unpack .../106-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpcre2-dev:ppc64el. 131s Preparing to unpack .../107-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpkgconf3:ppc64el. 131s Preparing to unpack .../108-libpkgconf3_1.8.1-2_ppc64el.deb ... 131s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 131s Selecting previously unselected package zlib1g-dev:ppc64el. 131s Preparing to unpack .../109-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 131s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 131s Selecting previously unselected package libpng-dev:ppc64el. 131s Preparing to unpack .../110-libpng-dev_1.6.43-1_ppc64el.deb ... 131s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 131s Selecting previously unselected package libpotrace0:ppc64el. 131s Preparing to unpack .../111-libpotrace0_1.16-2_ppc64el.deb ... 131s Unpacking libpotrace0:ppc64el (1.16-2) ... 131s Selecting previously unselected package libptexenc1:ppc64el. 131s Preparing to unpack .../112-libptexenc1_2023.20230311.66589-9_ppc64el.deb ... 131s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9) ... 131s Selecting previously unselected package libreadline-dev:ppc64el. 131s Preparing to unpack .../113-libreadline-dev_8.2-3_ppc64el.deb ... 131s Unpacking libreadline-dev:ppc64el (8.2-3) ... 131s Selecting previously unselected package libsharpyuv0:ppc64el. 131s Preparing to unpack .../114-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 131s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 131s Selecting previously unselected package libsm6:ppc64el. 131s Preparing to unpack .../115-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 131s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 131s Selecting previously unselected package libsynctex2:ppc64el. 131s Preparing to unpack .../116-libsynctex2_2023.20230311.66589-9_ppc64el.deb ... 131s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9) ... 131s Selecting previously unselected package libtcl8.6:ppc64el. 131s Preparing to unpack .../117-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 131s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 131s Selecting previously unselected package libteckit0:ppc64el. 131s Preparing to unpack .../118-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 131s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 131s Selecting previously unselected package libtexlua53-5:ppc64el. 131s Preparing to unpack .../119-libtexlua53-5_2023.20230311.66589-9_ppc64el.deb ... 131s Unpacking libtexlua53-5:ppc64el (2023.20230311.66589-9) ... 131s Selecting previously unselected package libjbig0:ppc64el. 131s Preparing to unpack .../120-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 131s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 131s Selecting previously unselected package libwebp7:ppc64el. 131s Preparing to unpack .../121-libwebp7_1.3.2-0.4_ppc64el.deb ... 131s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 131s Selecting previously unselected package libtiff6:ppc64el. 131s Preparing to unpack .../122-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 131s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 131s Selecting previously unselected package libxft2:ppc64el. 131s Preparing to unpack .../123-libxft2_2.3.6-1_ppc64el.deb ... 131s Unpacking libxft2:ppc64el (2.3.6-1) ... 131s Selecting previously unselected package libxss1:ppc64el. 131s Preparing to unpack .../124-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 131s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 131s Selecting previously unselected package libtk8.6:ppc64el. 131s Preparing to unpack .../125-libtk8.6_8.6.13-2_ppc64el.deb ... 131s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 131s Selecting previously unselected package libxt6:ppc64el. 131s Preparing to unpack .../126-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 131s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 131s Selecting previously unselected package libxmu6:ppc64el. 131s Preparing to unpack .../127-libxmu6_2%3a1.1.3-3_ppc64el.deb ... 131s Unpacking libxmu6:ppc64el (2:1.1.3-3) ... 131s Selecting previously unselected package libxpm4:ppc64el. 131s Preparing to unpack .../128-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 131s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 131s Selecting previously unselected package libxaw7:ppc64el. 131s Preparing to unpack .../129-libxaw7_2%3a1.0.14-1_ppc64el.deb ... 131s Unpacking libxaw7:ppc64el (2:1.0.14-1) ... 131s Selecting previously unselected package libxi6:ppc64el. 131s Preparing to unpack .../130-libxi6_2%3a1.8.1-1_ppc64el.deb ... 131s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 131s Selecting previously unselected package libzzip-0-13:ppc64el. 131s Preparing to unpack .../131-libzzip-0-13_0.13.72+dfsg.1-1.1_ppc64el.deb ... 131s Unpacking libzzip-0-13:ppc64el (0.13.72+dfsg.1-1.1) ... 131s Selecting previously unselected package zip. 131s Preparing to unpack .../132-zip_3.0-13_ppc64el.deb ... 131s Unpacking zip (3.0-13) ... 131s Selecting previously unselected package unzip. 131s Preparing to unpack .../133-unzip_6.0-28ubuntu3_ppc64el.deb ... 131s Unpacking unzip (6.0-28ubuntu3) ... 131s Selecting previously unselected package xdg-utils. 131s Preparing to unpack .../134-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 131s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 131s Selecting previously unselected package r-base-core. 131s Preparing to unpack .../135-r-base-core_4.3.2-1build1_ppc64el.deb ... 132s Unpacking r-base-core (4.3.2-1build1) ... 132s Selecting previously unselected package r-cran-littler. 132s Preparing to unpack .../136-r-cran-littler_0.3.19-1_ppc64el.deb ... 132s Unpacking r-cran-littler (0.3.19-1) ... 132s Selecting previously unselected package littler. 132s Preparing to unpack .../137-littler_0.3.19-1_all.deb ... 132s Unpacking littler (0.3.19-1) ... 132s Selecting previously unselected package node-bootstrap-sass. 132s Preparing to unpack .../138-node-bootstrap-sass_3.4.3-2_all.deb ... 132s Unpacking node-bootstrap-sass (3.4.3-2) ... 132s Selecting previously unselected package node-html5shiv. 132s Preparing to unpack .../139-node-html5shiv_3.7.3+dfsg-5_all.deb ... 132s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 132s Selecting previously unselected package node-normalize.css. 132s Preparing to unpack .../140-node-normalize.css_8.0.1-5_all.deb ... 132s Unpacking node-normalize.css (8.0.1-5) ... 132s Selecting previously unselected package pandoc-data. 132s Preparing to unpack .../141-pandoc-data_3.1.3-1_all.deb ... 132s Unpacking pandoc-data (3.1.3-1) ... 132s Selecting previously unselected package pandoc. 132s Preparing to unpack .../142-pandoc_3.1.3+ds-2_ppc64el.deb ... 132s Unpacking pandoc (3.1.3+ds-2) ... 133s Selecting previously unselected package pkgconf-bin. 133s Preparing to unpack .../143-pkgconf-bin_1.8.1-2_ppc64el.deb ... 133s Unpacking pkgconf-bin (1.8.1-2) ... 133s Selecting previously unselected package pkgconf:ppc64el. 133s Preparing to unpack .../144-pkgconf_1.8.1-2_ppc64el.deb ... 133s Unpacking pkgconf:ppc64el (1.8.1-2) ... 133s Selecting previously unselected package pkg-config:ppc64el. 133s Preparing to unpack .../145-pkg-config_1.8.1-2_ppc64el.deb ... 133s Unpacking pkg-config:ppc64el (1.8.1-2) ... 133s Selecting previously unselected package liblzma-dev:ppc64el. 133s Preparing to unpack .../146-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 133s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 133s Selecting previously unselected package r-base-dev. 133s Preparing to unpack .../147-r-base-dev_4.3.2-1build1_all.deb ... 133s Unpacking r-base-dev (4.3.2-1build1) ... 133s Selecting previously unselected package pkg-r-autopkgtest. 133s Preparing to unpack .../148-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 133s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 133s Selecting previously unselected package r-bioc-biocgenerics. 133s Preparing to unpack .../149-r-bioc-biocgenerics_0.48.1-2_all.deb ... 133s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 133s Selecting previously unselected package r-bioc-biobase. 133s Preparing to unpack .../150-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 133s Unpacking r-bioc-biobase (2.62.0-1) ... 134s Selecting previously unselected package r-bioc-s4vectors. 134s Preparing to unpack .../151-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 134s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 134s Selecting previously unselected package r-bioc-iranges. 134s Preparing to unpack .../152-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 134s Unpacking r-bioc-iranges (2.36.0-1) ... 134s Selecting previously unselected package r-cran-dbi. 134s Preparing to unpack .../153-r-cran-dbi_1.2.2-1_all.deb ... 134s Unpacking r-cran-dbi (1.2.2-1) ... 134s Selecting previously unselected package r-cran-bit. 134s Preparing to unpack .../154-r-cran-bit_4.0.5-1_ppc64el.deb ... 134s Unpacking r-cran-bit (4.0.5-1) ... 134s Selecting previously unselected package r-cran-bit64. 134s Preparing to unpack .../155-r-cran-bit64_4.0.5-1_ppc64el.deb ... 134s Unpacking r-cran-bit64 (4.0.5-1) ... 134s Selecting previously unselected package r-cran-rlang. 134s Preparing to unpack .../156-r-cran-rlang_1.1.3-1_ppc64el.deb ... 134s Unpacking r-cran-rlang (1.1.3-1) ... 134s Selecting previously unselected package r-cran-cli. 134s Preparing to unpack .../157-r-cran-cli_3.6.2-1_ppc64el.deb ... 134s Unpacking r-cran-cli (3.6.2-1) ... 134s Selecting previously unselected package r-cran-glue. 134s Preparing to unpack .../158-r-cran-glue_1.7.0-1_ppc64el.deb ... 134s Unpacking r-cran-glue (1.7.0-1) ... 134s Selecting previously unselected package r-cran-lifecycle. 134s Preparing to unpack .../159-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 134s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 134s Selecting previously unselected package r-cran-vctrs. 134s Preparing to unpack .../160-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 134s Unpacking r-cran-vctrs (0.6.5-1) ... 134s Selecting previously unselected package r-cran-blob. 134s Preparing to unpack .../161-r-cran-blob_1.2.4-1_all.deb ... 134s Unpacking r-cran-blob (1.2.4-1) ... 134s Selecting previously unselected package r-cran-fastmap. 134s Preparing to unpack .../162-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 134s Unpacking r-cran-fastmap (1.1.1-1) ... 134s Selecting previously unselected package r-cran-cachem. 134s Preparing to unpack .../163-r-cran-cachem_1.0.8-1_ppc64el.deb ... 134s Unpacking r-cran-cachem (1.0.8-1) ... 134s Selecting previously unselected package r-cran-memoise. 134s Preparing to unpack .../164-r-cran-memoise_2.0.1-1_all.deb ... 134s Unpacking r-cran-memoise (2.0.1-1) ... 134s Selecting previously unselected package r-cran-pkgconfig. 134s Preparing to unpack .../165-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 134s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 134s Selecting previously unselected package r-cran-plogr. 134s Preparing to unpack .../166-r-cran-plogr_0.2.0-3build1_all.deb ... 134s Unpacking r-cran-plogr (0.2.0-3build1) ... 134s Selecting previously unselected package r-cran-cpp11. 134s Preparing to unpack .../167-r-cran-cpp11_0.4.7-1_all.deb ... 134s Unpacking r-cran-cpp11 (0.4.7-1) ... 134s Selecting previously unselected package r-cran-rsqlite. 134s Preparing to unpack .../168-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 134s Unpacking r-cran-rsqlite (2.3.4-1) ... 134s Selecting previously unselected package r-cran-curl. 134s Preparing to unpack .../169-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 134s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-jsonlite. 134s Preparing to unpack .../170-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 134s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 134s Selecting previously unselected package r-cran-mime. 134s Preparing to unpack .../171-r-cran-mime_0.12-1_ppc64el.deb ... 134s Unpacking r-cran-mime (0.12-1) ... 134s Selecting previously unselected package r-cran-sys. 134s Preparing to unpack .../172-r-cran-sys_3.4.2-1_ppc64el.deb ... 134s Unpacking r-cran-sys (3.4.2-1) ... 134s Selecting previously unselected package r-cran-askpass. 134s Preparing to unpack .../173-r-cran-askpass_1.2.0-1_ppc64el.deb ... 134s Unpacking r-cran-askpass (1.2.0-1) ... 134s Selecting previously unselected package r-cran-openssl. 134s Preparing to unpack .../174-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 134s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 134s Selecting previously unselected package r-cran-r6. 134s Preparing to unpack .../175-r-cran-r6_2.5.1-1_all.deb ... 134s Unpacking r-cran-r6 (2.5.1-1) ... 134s Selecting previously unselected package r-cran-httr. 134s Preparing to unpack .../176-r-cran-httr_1.4.7+dfsg-1_all.deb ... 134s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 134s Selecting previously unselected package r-cran-png. 134s Preparing to unpack .../177-r-cran-png_0.1-8-1_ppc64el.deb ... 134s Unpacking r-cran-png (0.1-8-1) ... 134s Selecting previously unselected package r-bioc-zlibbioc. 134s Preparing to unpack .../178-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 134s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 134s Selecting previously unselected package r-bioc-xvector. 134s Preparing to unpack .../179-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 134s Unpacking r-bioc-xvector (0.42.0-1) ... 134s Selecting previously unselected package r-cran-bitops. 134s Preparing to unpack .../180-r-cran-bitops_1.0-7-1_ppc64el.deb ... 134s Unpacking r-cran-bitops (1.0-7-1) ... 134s Selecting previously unselected package r-cran-rcurl. 134s Preparing to unpack .../181-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 134s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 134s Selecting previously unselected package r-bioc-genomeinfodbdata. 134s Preparing to unpack .../182-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 134s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 135s Selecting previously unselected package r-bioc-genomeinfodb. 135s Preparing to unpack .../183-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 135s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 135s Selecting previously unselected package r-cran-crayon. 135s Preparing to unpack .../184-r-cran-crayon_1.5.2-1_all.deb ... 135s Unpacking r-cran-crayon (1.5.2-1) ... 135s Selecting previously unselected package r-bioc-biostrings. 135s Preparing to unpack .../185-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 135s Selecting previously unselected package r-bioc-keggrest. 135s Preparing to unpack .../186-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 135s Selecting previously unselected package r-bioc-annotationdbi. 135s Preparing to unpack .../187-r-bioc-annotationdbi_1.64.1-1_all.deb ... 135s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 135s Selecting previously unselected package r-cran-generics. 135s Preparing to unpack .../188-r-cran-generics_0.1.3-1_all.deb ... 135s Unpacking r-cran-generics (0.1.3-1) ... 135s Selecting previously unselected package r-cran-magrittr. 135s Preparing to unpack .../189-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 135s Unpacking r-cran-magrittr (2.0.3-1) ... 135s Selecting previously unselected package r-cran-fansi. 135s Preparing to unpack .../190-r-cran-fansi_1.0.5-1_ppc64el.deb ... 135s Unpacking r-cran-fansi (1.0.5-1) ... 135s Selecting previously unselected package r-cran-utf8. 135s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_ppc64el.deb ... 135s Unpacking r-cran-utf8 (1.2.4-1) ... 135s Selecting previously unselected package r-cran-pillar. 135s Preparing to unpack .../192-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 135s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-tibble. 135s Preparing to unpack .../193-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 135s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 135s Selecting previously unselected package r-cran-withr. 135s Preparing to unpack .../194-r-cran-withr_2.5.0-1_all.deb ... 135s Unpacking r-cran-withr (2.5.0-1) ... 135s Selecting previously unselected package r-cran-tidyselect. 135s Preparing to unpack .../195-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 135s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-dplyr. 135s Preparing to unpack .../196-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 135s Unpacking r-cran-dplyr (1.1.4-1) ... 135s Selecting previously unselected package r-cran-purrr. 135s Preparing to unpack .../197-r-cran-purrr_1.0.2-1_ppc64el.deb ... 135s Unpacking r-cran-purrr (1.0.2-1) ... 135s Selecting previously unselected package r-cran-stringi. 135s Preparing to unpack .../198-r-cran-stringi_1.8.3-1_ppc64el.deb ... 135s Unpacking r-cran-stringi (1.8.3-1) ... 135s Selecting previously unselected package r-cran-stringr. 135s Preparing to unpack .../199-r-cran-stringr_1.5.1-1_all.deb ... 135s Unpacking r-cran-stringr (1.5.1-1) ... 135s Selecting previously unselected package r-cran-tidyr. 135s Preparing to unpack .../200-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 135s Unpacking r-cran-tidyr (1.3.1-1) ... 135s Selecting previously unselected package r-cran-dbplyr. 135s Preparing to unpack .../201-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 135s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-filelock. 135s Preparing to unpack .../202-r-cran-filelock_1.0.3-1_ppc64el.deb ... 135s Unpacking r-cran-filelock (1.0.3-1) ... 135s Selecting previously unselected package r-bioc-biocfilecache. 135s Preparing to unpack .../203-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 135s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 135s Selecting previously unselected package r-bioc-biocio. 135s Preparing to unpack .../204-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-formatr. 135s Preparing to unpack .../205-r-cran-formatr_1.14-1_all.deb ... 135s Unpacking r-cran-formatr (1.14-1) ... 135s Selecting previously unselected package r-cran-lambda.r. 135s Preparing to unpack .../206-r-cran-lambda.r_1.2.4-2build1_all.deb ... 135s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 135s Selecting previously unselected package r-cran-futile.options. 135s Preparing to unpack .../207-r-cran-futile.options_1.0.1-3build1_all.deb ... 135s Unpacking r-cran-futile.options (1.0.1-3build1) ... 136s Selecting previously unselected package r-cran-futile.logger. 136s Preparing to unpack .../208-r-cran-futile.logger_1.4.3-4build1_all.deb ... 136s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 136s Selecting previously unselected package r-cran-snow. 136s Preparing to unpack .../209-r-cran-snow_1%3a0.4.4-2_all.deb ... 136s Unpacking r-cran-snow (1:0.4.4-2) ... 136s Selecting previously unselected package r-cran-codetools. 136s Preparing to unpack .../210-r-cran-codetools_0.2-19-1_all.deb ... 136s Unpacking r-cran-codetools (0.2-19-1) ... 136s Selecting previously unselected package r-cran-bh. 136s Preparing to unpack .../211-r-cran-bh_1.84.0-1_all.deb ... 136s Unpacking r-cran-bh (1.84.0-1) ... 136s Selecting previously unselected package r-bioc-biocparallel. 136s Preparing to unpack .../212-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 136s Unpacking r-bioc-biocparallel (1.36.0-1) ... 136s Selecting previously unselected package r-cran-base64enc. 136s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 136s Unpacking r-cran-base64enc (0.1-3-3) ... 136s Selecting previously unselected package r-cran-digest. 136s Preparing to unpack .../214-r-cran-digest_0.6.34-1_ppc64el.deb ... 136s Unpacking r-cran-digest (0.6.34-1) ... 136s Selecting previously unselected package r-cran-ellipsis. 136s Preparing to unpack .../215-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 136s Unpacking r-cran-ellipsis (0.3.2-2) ... 136s Selecting previously unselected package r-cran-htmltools. 136s Preparing to unpack .../216-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 136s Unpacking r-cran-htmltools (0.5.7-1) ... 136s Selecting previously unselected package r-cran-evaluate. 136s Preparing to unpack .../217-r-cran-evaluate_0.23-1_all.deb ... 136s Unpacking r-cran-evaluate (0.23-1) ... 136s Selecting previously unselected package r-cran-xfun. 136s Preparing to unpack .../218-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 136s Unpacking r-cran-xfun (0.41+dfsg-1) ... 136s Selecting previously unselected package r-cran-highr. 136s Preparing to unpack .../219-r-cran-highr_0.10+dfsg-1_all.deb ... 136s Unpacking r-cran-highr (0.10+dfsg-1) ... 136s Selecting previously unselected package r-cran-yaml. 136s Preparing to unpack .../220-r-cran-yaml_2.3.8-1_ppc64el.deb ... 136s Unpacking r-cran-yaml (2.3.8-1) ... 136s Selecting previously unselected package libjs-mathjax. 136s Preparing to unpack .../221-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 136s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 137s Selecting previously unselected package r-cran-knitr. 137s Preparing to unpack .../222-r-cran-knitr_1.45+dfsg-1_all.deb ... 137s Unpacking r-cran-knitr (1.45+dfsg-1) ... 137s Selecting previously unselected package r-cran-jquerylib. 137s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 137s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 137s Selecting previously unselected package r-cran-fs. 137s Preparing to unpack .../224-r-cran-fs_1.6.3+dfsg-1_ppc64el.deb ... 137s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 137s Selecting previously unselected package r-cran-rappdirs. 137s Preparing to unpack .../225-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 137s Unpacking r-cran-rappdirs (0.3.3-1) ... 137s Selecting previously unselected package r-cran-sass. 137s Preparing to unpack .../226-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 137s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 137s Selecting previously unselected package r-cran-bslib. 137s Preparing to unpack .../227-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 137s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 137s Selecting previously unselected package r-cran-fontawesome. 137s Preparing to unpack .../228-r-cran-fontawesome_0.5.2-1_all.deb ... 137s Unpacking r-cran-fontawesome (0.5.2-1) ... 137s Selecting previously unselected package r-cran-tinytex. 137s Preparing to unpack .../229-r-cran-tinytex_0.49-1_all.deb ... 137s Unpacking r-cran-tinytex (0.49-1) ... 137s Selecting previously unselected package libjs-modernizr. 137s Preparing to unpack .../230-libjs-modernizr_2.6.2+ds1-5_all.deb ... 137s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 137s Selecting previously unselected package r-cran-pkgkitten. 137s Preparing to unpack .../231-r-cran-pkgkitten_0.2.3-1_all.deb ... 137s Unpacking r-cran-pkgkitten (0.2.3-1) ... 137s Selecting previously unselected package r-cran-rcpp. 137s Preparing to unpack .../232-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 137s Unpacking r-cran-rcpp (1.0.12-1) ... 138s Selecting previously unselected package r-cran-later. 138s Preparing to unpack .../233-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 138s Unpacking r-cran-later (1.3.2+dfsg-1) ... 138s Selecting previously unselected package r-cran-promises. 138s Preparing to unpack .../234-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 138s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 138s Selecting previously unselected package r-cran-httpuv. 138s Preparing to unpack .../235-r-cran-httpuv_1.6.14+dfsg-1_ppc64el.deb ... 138s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 138s Selecting previously unselected package r-cran-xtable. 138s Preparing to unpack .../236-r-cran-xtable_1%3a1.8-4-2_all.deb ... 138s Unpacking r-cran-xtable (1:1.8-4-2) ... 138s Selecting previously unselected package r-cran-sourcetools. 138s Preparing to unpack .../237-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 138s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 138s Selecting previously unselected package r-cran-commonmark. 138s Preparing to unpack .../238-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 138s Unpacking r-cran-commonmark (1.9.1-1) ... 138s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 138s Preparing to unpack .../239-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 138s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 138s Selecting previously unselected package r-cran-shiny. 138s Preparing to unpack .../240-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 138s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 138s Selecting previously unselected package r-cran-rmarkdown. 138s Preparing to unpack .../241-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 138s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 138s Selecting previously unselected package r-cran-bookdown. 138s Preparing to unpack .../242-r-cran-bookdown_0.37+dfsg-1_all.deb ... 138s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 138s Selecting previously unselected package r-cran-biocmanager. 138s Preparing to unpack .../243-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 138s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 138s Selecting previously unselected package tex-common. 138s Preparing to unpack .../244-tex-common_6.18_all.deb ... 138s Unpacking tex-common (6.18) ... 138s Selecting previously unselected package t1utils. 138s Preparing to unpack .../245-t1utils_1.41-4build2_ppc64el.deb ... 138s Unpacking t1utils (1.41-4build2) ... 138s Selecting previously unselected package texlive-binaries. 138s Preparing to unpack .../246-texlive-binaries_2023.20230311.66589-9_ppc64el.deb ... 138s Unpacking texlive-binaries (2023.20230311.66589-9) ... 139s Selecting previously unselected package texlive-base. 139s Preparing to unpack .../247-texlive-base_2023.20240207-1_all.deb ... 139s Unpacking texlive-base (2023.20240207-1) ... 141s Selecting previously unselected package texlive-latex-base. 141s Preparing to unpack .../248-texlive-latex-base_2023.20240207-1_all.deb ... 141s Unpacking texlive-latex-base (2023.20240207-1) ... 141s Selecting previously unselected package texlive-bibtex-extra. 141s Preparing to unpack .../249-texlive-bibtex-extra_2023.20240207-1_all.deb ... 141s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 147s Selecting previously unselected package r-bioc-biocstyle. 147s Preparing to unpack .../250-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 147s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 147s Selecting previously unselected package r-cran-xml. 147s Preparing to unpack .../251-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 147s Unpacking r-cran-xml (3.99-0.16.1-1) ... 147s Selecting previously unselected package r-cran-hms. 147s Preparing to unpack .../252-r-cran-hms_1.1.3-1_all.deb ... 147s Unpacking r-cran-hms (1.1.3-1) ... 147s Selecting previously unselected package r-cran-prettyunits. 147s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 147s Unpacking r-cran-prettyunits (1.2.0-1) ... 147s Selecting previously unselected package r-cran-progress. 147s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 147s Unpacking r-cran-progress (1.2.3-1) ... 147s Selecting previously unselected package r-cran-xml2. 147s Preparing to unpack .../255-r-cran-xml2_1.3.6-1_ppc64el.deb ... 147s Unpacking r-cran-xml2 (1.3.6-1) ... 147s Selecting previously unselected package r-bioc-biomart. 147s Preparing to unpack .../256-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 147s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 147s Selecting previously unselected package r-cran-lattice. 147s Preparing to unpack .../257-r-cran-lattice_0.22-5-1_ppc64el.deb ... 147s Unpacking r-cran-lattice (0.22-5-1) ... 147s Selecting previously unselected package r-cran-matrix. 147s Preparing to unpack .../258-r-cran-matrix_1.6-5-1_ppc64el.deb ... 147s Unpacking r-cran-matrix (1.6-5-1) ... 147s Selecting previously unselected package r-cran-matrixstats. 147s Preparing to unpack .../259-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 147s Unpacking r-cran-matrixstats (1.2.0-1) ... 147s Selecting previously unselected package r-bioc-matrixgenerics. 147s Preparing to unpack .../260-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 147s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 147s Selecting previously unselected package r-cran-abind. 147s Preparing to unpack .../261-r-cran-abind_1.4-5-2_all.deb ... 147s Unpacking r-cran-abind (1.4-5-2) ... 147s Selecting previously unselected package r-bioc-s4arrays. 147s Preparing to unpack .../262-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 147s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-sparsearray. 147s Preparing to unpack .../263-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 147s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 147s Selecting previously unselected package r-bioc-delayedarray. 147s Preparing to unpack .../264-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 147s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-genomicranges. 148s Preparing to unpack .../265-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 148s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 148s Selecting previously unselected package r-bioc-summarizedexperiment. 148s Preparing to unpack .../266-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 148s Selecting previously unselected package r-bioc-rhtslib. 148s Preparing to unpack .../267-r-bioc-rhtslib_2.4.1+dfsg-1_ppc64el.deb ... 148s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 148s Selecting previously unselected package r-bioc-rsamtools. 148s Preparing to unpack .../268-r-bioc-rsamtools_2.18.0+dfsg-1build1_ppc64el.deb ... 148s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 148s Selecting previously unselected package r-bioc-genomicalignments. 148s Preparing to unpack .../269-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 148s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 148s Selecting previously unselected package r-cran-rjson. 148s Preparing to unpack .../270-r-cran-rjson_0.2.21-1_ppc64el.deb ... 148s Unpacking r-cran-rjson (0.2.21-1) ... 148s Selecting previously unselected package r-cran-restfulr. 148s Preparing to unpack .../271-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 148s Unpacking r-cran-restfulr (0.0.15-1) ... 148s Selecting previously unselected package r-bioc-rtracklayer. 148s Preparing to unpack .../272-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 148s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 148s Selecting previously unselected package r-bioc-genomicfeatures. 148s Preparing to unpack .../273-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 148s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 148s Selecting previously unselected package r-cran-hwriter. 148s Preparing to unpack .../274-r-cran-hwriter_1.3.2.1-1_all.deb ... 148s Unpacking r-cran-hwriter (1.3.2.1-1) ... 148s Selecting previously unselected package r-cran-jpeg. 148s Preparing to unpack .../275-r-cran-jpeg_0.1-10-1_ppc64el.deb ... 148s Unpacking r-cran-jpeg (0.1-10-1) ... 148s Selecting previously unselected package r-cran-rcolorbrewer. 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warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 154s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 154s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 154s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 154s Setting up texlive-bibtex-extra (2023.20240207-1) ... 154s Setting up r-cran-interp (1.1-6-1) ... 154s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 154s Setting up r-cran-httr (1.4.7+dfsg-1) ... 154s Setting up r-cran-hms (1.1.3-1) ... 154s Setting up r-cran-memoise (2.0.1-1) ... 154s Setting up r-cran-promises (1.2.1+dfsg-1) ... 154s Setting up r-cran-purrr (1.0.2-1) ... 154s Setting up r-cran-blob (1.2.4-1) ... 154s Setting up r-cran-htmltools (0.5.7-1) ... 154s Setting up r-bioc-xvector (0.42.0-1) ... 154s Setting up r-cran-sass (0.4.8+dfsg-1) ... 154s Setting up r-cran-dplyr (1.1.4-1) ... 154s Setting up r-cran-rsqlite (2.3.4-1) ... 154s Setting up r-cran-progress (1.2.3-1) ... 154s Setting up r-base-dev (4.3.2-1build1) ... 154s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 154s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 154s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 154s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 154s Setting up r-cran-fontawesome (0.5.2-1) ... 154s Setting up r-cran-latticeextra (0.6-30-1) ... 154s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 154s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 154s Setting up r-cran-tidyr (1.3.1-1) ... 154s Setting up r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 154s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 154s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 154s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 154s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 154s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 154s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 154s Setting up r-bioc-annotationdbi (1.64.1-1) ... 154s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 154s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 154s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 154s Setting up r-bioc-genomicalignments (1.38.2-1) ... 154s Setting up r-cran-bookdown (0.37+dfsg-1) ... 154s Setting up r-bioc-rtracklayer (1.62.0-1) ... 154s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 154s Setting up r-bioc-shortread (1.60.0-2) ... 154s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 154s Setting up autopkgtest-satdep (0) ... 154s Processing triggers for man-db (2.12.0-3) ... 156s Processing triggers for install-info (7.1-3) ... 156s Processing triggers for libc-bin (2.39-0ubuntu2) ... 156s Processing triggers for tex-common (6.18) ... 156s Running updmap-sys. This may take some time... done. 156s Running mktexlsr /var/lib/texmf ... done. 156s Building format(s) --all. 201s This may take some time... done. 209s (Reading database ... 120280 files and directories currently installed.) 209s Removing autopkgtest-satdep (0) ... 209s autopkgtest [21:50:23]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 209s autopkgtest [21:50:23]: test pkg-r-autopkgtest: [----------------------- 209s Test: Try to load the R library ShortRead 209s 209s R version 4.3.2 (2023-10-31) -- "Eye Holes" 209s Copyright (C) 2023 The R Foundation for Statistical Computing 209s Platform: powerpc64le-unknown-linux-gnu (64-bit) 209s 209s R is free software and comes with ABSOLUTELY NO WARRANTY. 210s You are welcome to redistribute it under certain conditions. 210s Type 'license()' or 'licence()' for distribution details. 210s 210s R is a collaborative project with many contributors. 210s Type 'contributors()' for more information and 210s 'citation()' on how to cite R or R packages in publications. 210s 210s Type 'demo()' for some demos, 'help()' for on-line help, or 210s 'help.start()' for an HTML browser interface to help. 210s Type 'q()' to quit R. 210s 210s > Loading required package: BiocGenerics 210s library('ShortRead') 210s 210s Attaching package: ‘BiocGenerics’ 210s 210s The following objects are masked from ‘package:stats’: 210s 210s IQR, mad, sd, var, xtabs 210s 210s The following objects are masked from ‘package:base’: 210s 210s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 210s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 210s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 210s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 210s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 210s table, tapply, union, unique, unsplit, which.max, which.min 210s 210s Loading required package: BiocParallel 210s Loading required package: Biostrings 210s Loading required package: S4Vectors 210s Loading required package: stats4 211s 211s Attaching package: ‘S4Vectors’ 211s 211s The following object is masked from ‘package:utils’: 211s 211s findMatches 211s 211s The following objects are masked from ‘package:base’: 211s 211s expand.grid, I, unname 211s 211s Loading required package: IRanges 211s Loading required package: XVector 212s Loading required package: GenomeInfoDb 213s 213s Attaching package: ‘Biostrings’ 213s 213s The following object is masked from ‘package:base’: 213s 213s strsplit 213s 213s Loading required package: Rsamtools 213s Loading required package: GenomicRanges 213s Loading required package: GenomicAlignments 213s Loading required package: SummarizedExperiment 213s Loading required package: MatrixGenerics 213s Loading required package: matrixStats 213s 213s Attaching package: ‘MatrixGenerics’ 213s 213s The following objects are masked from ‘package:matrixStats’: 213s 213s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 213s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 213s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 213s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 213s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 213s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 213s colWeightedMeans, colWeightedMedians, colWeightedSds, 213s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 213s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 213s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 213s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 213s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 213s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 213s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 213s rowWeightedSds, rowWeightedVars 213s 213s Loading required package: Biobase 214s Welcome to Bioconductor 214s 214s Vignettes contain introductory material; view with 214s 'browseVignettes()'. To cite Bioconductor, see 214s 'citation("Biobase")', and for packages 'citation("pkgname")'. 214s 214s 214s Attaching package: ‘Biobase’ 214s 214s The following object is masked from ‘package:MatrixGenerics’: 214s 214s rowMedians 214s 214s The following objects are masked from ‘package:matrixStats’: 214s 214s anyMissing, rowMedians 214s 219s Warning message: 219s package ‘Rsamtools’ was built under R version 4.3.3 219s > 219s > 219s Other tests are currently unsupported! 219s They will be progressively added. 219s autopkgtest [21:50:33]: test pkg-r-autopkgtest: -----------------------] 220s autopkgtest [21:50:34]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 220s pkg-r-autopkgtest PASS 220s autopkgtest [21:50:34]: @@@@@@@@@@@@@@@@@@@@ summary 220s pkg-r-autopkgtest PASS 231s Creating nova instance adt-noble-ppc64el-r-bioc-shortread-20240317-214654-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...