0s autopkgtest [21:27:13]: starting date and time: 2024-03-17 21:27:13+0000 0s autopkgtest [21:27:13]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:27:13]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.3iw4v20g/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rhtslib,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-shortread --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rhtslib/2.4.1+dfsg-3build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-10.secgroup --name adt-noble-ppc64el-r-bioc-shortread-20240317-212712-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 110s autopkgtest [21:29:03]: testbed dpkg architecture: ppc64el 110s autopkgtest [21:29:03]: testbed apt version: 2.7.12 110s autopkgtest [21:29:03]: @@@@@@@@@@@@@@@@@@@@ test bed setup 111s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 111s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [484 kB] 111s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 112s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3676 kB] 112s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 112s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 112s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 112s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 112s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 112s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3974 kB] 112s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 112s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 112s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 115s Fetched 9012 kB in 2s (3876 kB/s) 116s Reading package lists... 118s Reading package lists... 119s Building dependency tree... 119s Reading state information... 119s Calculating upgrade... 119s The following packages will be REMOVED: 119s libssl3 119s The following NEW packages will be installed: 119s libssl3t64 119s The following packages have been kept back: 119s curl 119s The following packages will be upgraded: 119s openssl 119s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 119s Need to get 3195 kB of archives. 119s After this operation, 6144 B of additional disk space will be used. 119s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 120s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 120s Fetched 3195 kB in 1s (3618 kB/s) 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 120s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 120s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 120s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 120s wget depends on libssl3 (>= 3.0.0). 120s tnftp depends on libssl3 (>= 3.0.0). 120s tcpdump depends on libssl3 (>= 3.0.0). 120s systemd-resolved depends on libssl3 (>= 3.0.0). 120s systemd depends on libssl3 (>= 3.0.0). 120s sudo depends on libssl3 (>= 3.0.0). 120s rsync depends on libssl3 (>= 3.0.0). 120s python3-cryptography depends on libssl3 (>= 3.0.0). 120s openssh-server depends on libssl3 (>= 3.0.10). 120s openssh-client depends on libssl3 (>= 3.0.10). 120s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 120s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 120s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 120s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 120s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 120s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 120s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 120s libnvme1 depends on libssl3 (>= 3.0.0). 120s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 120s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 120s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 120s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 120s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 120s kmod depends on libssl3 (>= 3.0.0). 120s dhcpcd-base depends on libssl3 (>= 3.0.0). 120s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 120s 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 120s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 120s Selecting previously unselected package libssl3t64:ppc64el. 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 120s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 120s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 121s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 121s Setting up openssl (3.0.13-0ubuntu1) ... 121s Processing triggers for man-db (2.12.0-3) ... 122s Processing triggers for libc-bin (2.39-0ubuntu2) ... 122s Reading package lists... 122s Building dependency tree... 122s Reading state information... 123s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 123s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 123s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 123s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 123s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 124s Reading package lists... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 125s Calculating upgrade... 125s The following packages have been kept back: 125s curl 125s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 125s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 128s autopkgtest [21:29:21]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 128s autopkgtest [21:29:21]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-shortread 130s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (dsc) [2387 B] 130s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (tar) [5223 kB] 130s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (diff) [5876 B] 130s gpgv: Signature made Mon Dec 18 09:06:56 2023 UTC 130s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 130s gpgv: issuer "tille@debian.org" 130s gpgv: Can't check signature: No public key 130s dpkg-source: warning: cannot verify inline signature for ./r-bioc-shortread_1.60.0-2.dsc: no acceptable signature found 130s autopkgtest [21:29:23]: testing package r-bioc-shortread version 1.60.0-2 131s autopkgtest [21:29:24]: build not needed 132s autopkgtest [21:29:25]: test pkg-r-autopkgtest: preparing testbed 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 136s Starting pkgProblemResolver with broken count: 0 136s Starting 2 pkgProblemResolver with broken count: 0 136s Done 136s The following additional packages will be installed: 136s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 136s cpp-powerpc64le-linux-gnu curl dctrl-tools fontconfig fontconfig-config 136s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 136s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 136s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 136s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 136s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 136s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 136s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 136s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 136s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 136s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 136s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 136s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 136s libjs-highlight.js libjs-jquery libjs-jquery-datatables 136s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 136s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 136s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 136s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 136s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 136s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 136s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 136s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libquadmath0 libreadline-dev 136s libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 136s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 136s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 136s libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 136s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 136s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 136s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 136s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 136s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 136s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 136s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 136s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 136s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 136s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 136s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 136s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 136s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 136s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 136s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 136s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 136s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 136s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 136s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 136s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 136s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 136s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 136s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 136s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 136s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 136s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 136s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 136s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 136s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 136s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 136s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 136s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 136s Suggested packages: 136s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 136s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 136s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 136s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 136s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 136s libboost-context1.83-dev libboost-contract1.83-dev 136s libboost-coroutine1.83-dev libboost-date-time1.83-dev 136s libboost-exception1.83-dev libboost-fiber1.83-dev 136s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 136s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 136s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 136s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 136s libboost-numpy1.83-dev libboost-program-options1.83-dev 136s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 136s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 136s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 136s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 136s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 136s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 136s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 136s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 136s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 136s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 136s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 136s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 136s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all r-cran-testthat 136s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 136s r-cran-doparallel r-bioc-variantannotation r-cran-batchtools 136s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-bsgenome 136s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 136s r-cran-r.utils r-bioc-edger r-bioc-ensembldb r-bioc-annotationfilter 136s r-cran-markdown r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq 136s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff 136s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-polyclip r-cran-lubridate 136s r-cran-sp r-cran-ggplot2 r-cran-gridextra r-cran-scatterplot3d r-cran-getopt 136s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-scales 136s r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 136s r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio r-cran-callr 136s r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper 136s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 136s texlive-latex-base-doc wp2latex 136s Recommended packages: 136s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 136s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 136s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 136s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 136s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 136s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 136s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 136s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql 136s r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo 136s r-cran-cairo r-cran-markdown r-cran-ragg r-cran-readr r-cran-r.rsp r-cran-sf 136s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 136s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 136s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis 136s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 136s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 136s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 136s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 136s The following packages will be REMOVED: 136s libcurl4 libpsl5 136s The following NEW packages will be installed: 136s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 136s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 136s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 136s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 136s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 136s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 136s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 136s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 136s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 136s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 136s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 136s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 136s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 136s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 136s libjs-highlight.js libjs-jquery libjs-jquery-datatables 136s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 136s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 136s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 136s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 136s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 136s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 136s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 136s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libquadmath0 libreadline-dev 136s libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 136s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 136s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 136s libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 136s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 136s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 136s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 136s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 136s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 136s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 136s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 136s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 136s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 136s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 136s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 136s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 136s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 136s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 136s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 136s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 136s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 136s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 136s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 136s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 136s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 136s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 136s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 136s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 136s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 136s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 136s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 136s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 136s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 136s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 136s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 136s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 136s The following packages will be upgraded: 136s curl 136s 1 upgraded, 286 newly installed, 2 to remove and 0 not upgraded. 136s Need to get 435 MB/435 MB of archives. 136s After this operation, 1418 MB of additional disk space will be used. 136s Get:1 /tmp/autopkgtest.ni6ldr/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [760 B] 136s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1 [59.0 kB] 136s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu7 [234 kB] 137s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu7 [428 kB] 137s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 137s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 137s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 137s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 137s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 137s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 137s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 137s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 137s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 137s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 137s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 137s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 137s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 137s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 137s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 137s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 137s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 137s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 137s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 137s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 137s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 137s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 137s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 137s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 138s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 138s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 138s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 138s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 138s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 138s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 138s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 138s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 138s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 138s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 138s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 138s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 138s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 138s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 138s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 138s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 138s Get:45 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 138s Get:46 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 139s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 139s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 139s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 139s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 139s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 139s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 139s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 139s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 139s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 139s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 139s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 139s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 139s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 139s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 139s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 139s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 139s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 139s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 139s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 139s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 139s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 139s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 139s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 139s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 139s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 139s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 139s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 139s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 139s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 140s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 140s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 140s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 140s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 140s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 140s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 140s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 140s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 140s Get:84 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 140s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 140s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 140s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 140s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 140s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 140s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 140s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 140s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 140s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 140s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 140s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 140s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9 [71.2 kB] 140s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 140s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 140s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 140s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 140s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 140s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 140s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 141s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 141s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 141s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 141s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 141s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 141s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 141s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 141s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 141s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 141s Get:113 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 141s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 141s Get:115 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 141s Get:116 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9 [42.9 kB] 141s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 141s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 141s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 141s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9 [68.6 kB] 141s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 141s Get:122 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 141s Get:123 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9 [163 kB] 141s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 141s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 141s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 141s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 141s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 141s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 141s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 141s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3 [57.2 kB] 141s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 141s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1 [227 kB] 141s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 141s Get:135 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13 ppc64el 0.13.72+dfsg.1-1.1 [29.7 kB] 141s Get:136 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 141s Get:137 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 141s Get:138 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 141s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 142s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 142s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el littler all 0.3.19-1 [2472 B] 142s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 142s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 142s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 142s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 142s Get:146 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 143s Get:147 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 143s Get:148 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 143s Get:149 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 143s Get:150 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 143s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 143s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 143s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 143s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 143s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 143s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 143s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 143s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 143s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 143s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 143s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 143s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 143s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 143s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 143s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 143s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 143s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 143s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 143s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 143s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 143s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 143s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 143s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 143s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 143s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 143s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 143s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 143s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 143s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 143s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 143s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 143s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 143s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 143s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 143s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 143s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 144s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 144s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 144s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 144s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 144s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 144s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 144s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 144s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 144s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 144s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 144s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 144s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 144s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 144s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 145s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 145s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 145s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 145s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 145s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 145s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 145s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 145s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 145s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 145s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 145s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 145s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 145s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 145s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 145s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 145s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 145s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 145s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 145s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 145s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 146s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 146s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 146s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 146s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 146s Get:225 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 146s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 146s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 146s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1 [231 kB] 146s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 146s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 146s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 146s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 146s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 146s Get:234 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 146s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 146s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 146s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 146s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 146s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1 [527 kB] 146s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 146s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 146s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 146s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 146s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 146s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 147s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 147s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 147s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 147s Get:249 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 147s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9 [12.4 MB] 147s Get:251 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 148s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 148s Get:253 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 152s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 152s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 152s Get:256 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 152s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 152s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 152s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 152s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 152s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 152s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 152s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 152s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 152s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 152s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 152s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 152s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 152s Get:269 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 153s Get:270 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 153s Get:271 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-3build1 [1552 kB] 153s Get:272 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1 [3801 kB] 153s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 153s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 153s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 153s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 153s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 153s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hwriter all 1.3.2.1-1 [106 kB] 153s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jpeg ppc64el 0.1-10-1 [37.0 kB] 153s Get:280 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 153s Get:281 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-deldir ppc64el 2.0-4-1 [273 kB] 153s Get:282 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcppeigen ppc64el 0.3.3.9.4-1 [1216 kB] 153s Get:283 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-interp ppc64el 1.1-6-1 [1492 kB] 153s Get:284 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 153s Get:285 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-latticeextra all 0.6-30-1 [2198 kB] 154s Get:286 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-shortread ppc64el 1.60.0-2 [5208 kB] 154s Get:287 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 154s Preconfiguring packages ... 155s Fetched 435 MB in 18s (24.5 MB/s) 155s dpkg: libpsl5:ppc64el: dependency problems, but removing anyway as you requested: 155s wget depends on libpsl5 (>= 0.16.0). 155s libcurl4:ppc64el depends on libpsl5 (>= 0.16.0). 155s libcurl3-gnutls:ppc64el depends on libpsl5 (>= 0.16.0). 155s 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 155s Removing libpsl5:ppc64el (0.21.2-1build1) ... 155s Selecting previously unselected package libpsl5t64:ppc64el. 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70092 files and directories currently installed.) 155s Preparing to unpack .../libpsl5t64_0.21.2-1.1_ppc64el.deb ... 155s Unpacking libpsl5t64:ppc64el (0.21.2-1.1) ... 155s Preparing to unpack .../curl_8.5.0-2ubuntu7_ppc64el.deb ... 155s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70098 files and directories currently installed.) 155s Removing libcurl4:ppc64el (8.5.0-2ubuntu2) ... 155s Selecting previously unselected package libcurl4t64:ppc64el. 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70093 files and directories currently installed.) 155s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_ppc64el.deb ... 155s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 155s Selecting previously unselected package libc-dev-bin. 155s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 155s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 155s Selecting previously unselected package linux-libc-dev:ppc64el. 155s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 155s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 155s Selecting previously unselected package libcrypt-dev:ppc64el. 155s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 155s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 155s Selecting previously unselected package libtirpc-dev:ppc64el. 155s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 155s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 155s Selecting previously unselected package libnsl-dev:ppc64el. 155s Preparing to unpack .../005-libnsl-dev_1.3.0-3_ppc64el.deb ... 155s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 155s Selecting previously unselected package rpcsvc-proto. 155s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 155s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 155s Selecting previously unselected package libc6-dev:ppc64el. 155s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 155s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 155s Selecting previously unselected package libisl23:ppc64el. 155s Preparing to unpack .../008-libisl23_0.26-3_ppc64el.deb ... 155s Unpacking libisl23:ppc64el (0.26-3) ... 155s Selecting previously unselected package libmpc3:ppc64el. 155s Preparing to unpack .../009-libmpc3_1.3.1-1_ppc64el.deb ... 155s Unpacking libmpc3:ppc64el (1.3.1-1) ... 155s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 155s Preparing to unpack .../010-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 155s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 156s Selecting previously unselected package cpp-13. 156s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 156s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 156s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 156s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 156s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 156s Selecting previously unselected package cpp. 156s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 156s Unpacking cpp (4:13.2.0-7ubuntu1) ... 156s Selecting previously unselected package libcc1-0:ppc64el. 156s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libgomp1:ppc64el. 156s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libitm1:ppc64el. 156s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libatomic1:ppc64el. 156s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libasan8:ppc64el. 156s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package liblsan0:ppc64el. 156s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libtsan2:ppc64el. 156s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libubsan1:ppc64el. 156s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libquadmath0:ppc64el. 156s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 156s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 156s Selecting previously unselected package libgcc-13-dev:ppc64el. 156s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 156s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 156s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 156s Preparing to unpack .../024-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 156s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 157s Selecting previously unselected package gcc-13. 157s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 157s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 157s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 157s Preparing to unpack .../026-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 157s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 157s Selecting previously unselected package gcc. 157s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 157s Unpacking gcc (4:13.2.0-7ubuntu1) ... 157s Selecting previously unselected package libstdc++-13-dev:ppc64el. 157s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 157s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 157s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 157s Preparing to unpack .../029-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 157s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 157s Selecting previously unselected package g++-13. 157s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 157s Unpacking g++-13 (13.2.0-17ubuntu2) ... 157s Selecting previously unselected package g++-powerpc64le-linux-gnu. 157s Preparing to unpack .../031-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 157s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 157s Selecting previously unselected package g++. 157s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 157s Unpacking g++ (4:13.2.0-7ubuntu1) ... 157s Selecting previously unselected package build-essential. 157s Preparing to unpack .../033-build-essential_12.10ubuntu1_ppc64el.deb ... 157s Unpacking build-essential (12.10ubuntu1) ... 157s Selecting previously unselected package dctrl-tools. 157s Preparing to unpack .../034-dctrl-tools_2.24-3build2_ppc64el.deb ... 157s Unpacking dctrl-tools (2.24-3build2) ... 157s Selecting previously unselected package fonts-dejavu-mono. 157s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 157s Unpacking fonts-dejavu-mono (2.37-8) ... 158s Selecting previously unselected package fonts-dejavu-core. 158s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 158s Unpacking fonts-dejavu-core (2.37-8) ... 158s Selecting previously unselected package fontconfig-config. 158s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 158s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 158s Selecting previously unselected package libfontconfig1:ppc64el. 158s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 158s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 158s Selecting previously unselected package fontconfig. 158s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 158s Unpacking fontconfig (2.15.0-1ubuntu1) ... 158s Selecting previously unselected package fonts-font-awesome. 158s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 158s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 158s Selecting previously unselected package fonts-glyphicons-halflings. 158s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 158s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 158s Selecting previously unselected package fonts-lmodern. 158s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 158s Unpacking fonts-lmodern (2.005-1) ... 158s Selecting previously unselected package fonts-mathjax. 158s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 158s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 158s Selecting previously unselected package libgfortran5:ppc64el. 158s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 158s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libgfortran-13-dev:ppc64el. 158s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 158s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 158s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 158s Preparing to unpack .../046-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 158s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package gfortran-13. 159s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 159s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 159s Preparing to unpack .../048-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 159s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 159s Selecting previously unselected package gfortran. 159s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 159s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 159s Selecting previously unselected package icu-devtools. 159s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 159s Unpacking icu-devtools (74.2-1ubuntu1) ... 159s Selecting previously unselected package javascript-common. 159s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 159s Unpacking javascript-common (11+nmu1) ... 159s Selecting previously unselected package libio-string-perl. 159s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 159s Unpacking libio-string-perl (1.08-4) ... 159s Selecting previously unselected package liblatex-tounicode-perl. 159s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 159s Unpacking liblatex-tounicode-perl (0.54-2) ... 159s Selecting previously unselected package libbibtex-parser-perl. 159s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 159s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 159s Selecting previously unselected package libblas3:ppc64el. 159s Preparing to unpack .../055-libblas3_3.12.0-3_ppc64el.deb ... 159s Unpacking libblas3:ppc64el (3.12.0-3) ... 159s Selecting previously unselected package libblas-dev:ppc64el. 159s Preparing to unpack .../056-libblas-dev_3.12.0-3_ppc64el.deb ... 159s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 159s Selecting previously unselected package libboost1.83-dev:ppc64el. 159s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 159s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 162s Selecting previously unselected package libboost-dev:ppc64el. 162s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 162s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 162s Selecting previously unselected package libbz2-dev:ppc64el. 162s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 162s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 162s Selecting previously unselected package libpixman-1-0:ppc64el. 162s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_ppc64el.deb ... 162s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 162s Selecting previously unselected package libxcb-render0:ppc64el. 162s Preparing to unpack .../061-libxcb-render0_1.15-1_ppc64el.deb ... 162s Unpacking libxcb-render0:ppc64el (1.15-1) ... 162s Selecting previously unselected package libxcb-shm0:ppc64el. 162s Preparing to unpack .../062-libxcb-shm0_1.15-1_ppc64el.deb ... 162s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 162s Selecting previously unselected package libxrender1:ppc64el. 162s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 162s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 162s Selecting previously unselected package libcairo2:ppc64el. 162s Preparing to unpack .../064-libcairo2_1.18.0-1_ppc64el.deb ... 162s Unpacking libcairo2:ppc64el (1.18.0-1) ... 162s Selecting previously unselected package libdatrie1:ppc64el. 162s Preparing to unpack .../065-libdatrie1_0.2.13-3_ppc64el.deb ... 162s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 162s Selecting previously unselected package libdeflate0:ppc64el. 162s Preparing to unpack .../066-libdeflate0_1.19-1_ppc64el.deb ... 162s Unpacking libdeflate0:ppc64el (1.19-1) ... 162s Selecting previously unselected package libgraphite2-3:ppc64el. 162s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_ppc64el.deb ... 162s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 162s Selecting previously unselected package libharfbuzz0b:ppc64el. 162s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 162s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 162s Selecting previously unselected package x11-common. 162s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 162s Unpacking x11-common (1:7.7+23ubuntu2) ... 162s Selecting previously unselected package libice6:ppc64el. 162s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 162s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 162s Selecting previously unselected package libicu-dev:ppc64el. 162s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 162s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 163s Selecting previously unselected package libjpeg-turbo8:ppc64el. 163s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 163s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 163s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 163s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 163s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 163s Selecting previously unselected package libjpeg8:ppc64el. 163s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 163s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 163s Selecting previously unselected package libjpeg8-dev:ppc64el. 163s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 163s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 163s Selecting previously unselected package libjpeg-dev:ppc64el. 163s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 163s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 163s Selecting previously unselected package libjs-bootstrap. 163s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 163s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 163s Selecting previously unselected package libjs-popper.js. 163s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 163s Unpacking libjs-popper.js (1.16.1+ds-6) ... 163s Selecting previously unselected package libjs-bootstrap4. 163s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 163s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 163s Selecting previously unselected package libjs-d3. 163s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 163s Unpacking libjs-d3 (3.5.17-4) ... 163s Selecting previously unselected package libjs-es5-shim. 163s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 163s Unpacking libjs-es5-shim (4.6.7-2) ... 163s Selecting previously unselected package libjs-highlight.js. 163s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 163s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 163s Selecting previously unselected package libjs-jquery. 163s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 163s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 163s Selecting previously unselected package libjs-jquery-datatables. 163s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 163s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 163s Selecting previously unselected package libjs-sifter.js. 163s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 163s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 163s Selecting previously unselected package libjs-microplugin.js. 163s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 163s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 163s Selecting previously unselected package libjs-jquery-selectize.js. 163s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 163s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 163s Selecting previously unselected package libjs-jquery-ui. 163s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 163s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 163s Selecting previously unselected package libjs-json. 163s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 163s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 163s Selecting previously unselected package libjs-lunr. 163s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 163s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 163s Selecting previously unselected package libjs-prettify. 163s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 163s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 163s Selecting previously unselected package libkpathsea6:ppc64el. 163s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_ppc64el.deb ... 163s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9) ... 163s Selecting previously unselected package liblapack3:ppc64el. 163s Preparing to unpack .../093-liblapack3_3.12.0-3_ppc64el.deb ... 163s Unpacking liblapack3:ppc64el (3.12.0-3) ... 164s Selecting previously unselected package liblapack-dev:ppc64el. 164s Preparing to unpack .../094-liblapack-dev_3.12.0-3_ppc64el.deb ... 164s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 164s Selecting previously unselected package liblerc4:ppc64el. 164s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 164s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 164s Selecting previously unselected package libncurses-dev:ppc64el. 164s Preparing to unpack .../096-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 164s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 164s Selecting previously unselected package libthai-data. 164s Preparing to unpack .../097-libthai-data_0.1.29-2_all.deb ... 164s Unpacking libthai-data (0.1.29-2) ... 164s Selecting previously unselected package libthai0:ppc64el. 164s Preparing to unpack .../098-libthai0_0.1.29-2_ppc64el.deb ... 164s Unpacking libthai0:ppc64el (0.1.29-2) ... 164s Selecting previously unselected package libpango-1.0-0:ppc64el. 164s Preparing to unpack .../099-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 164s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 164s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 164s Preparing to unpack .../100-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 164s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 164s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 164s Preparing to unpack .../101-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 164s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 164s Selecting previously unselected package libpaper1:ppc64el. 164s Preparing to unpack .../102-libpaper1_1.1.29_ppc64el.deb ... 164s Unpacking libpaper1:ppc64el (1.1.29) ... 164s Selecting previously unselected package libpaper-utils. 164s Preparing to unpack .../103-libpaper-utils_1.1.29_ppc64el.deb ... 164s Unpacking libpaper-utils (1.1.29) ... 164s Selecting previously unselected package libpcre2-16-0:ppc64el. 164s Preparing to unpack .../104-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 164s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 164s Selecting previously unselected package libpcre2-32-0:ppc64el. 164s Preparing to unpack .../105-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 164s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 164s Selecting previously unselected package libpcre2-posix3:ppc64el. 164s Preparing to unpack .../106-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 164s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 164s Selecting previously unselected package libpcre2-dev:ppc64el. 164s Preparing to unpack .../107-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 164s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 164s Selecting previously unselected package libpkgconf3:ppc64el. 164s Preparing to unpack .../108-libpkgconf3_1.8.1-2_ppc64el.deb ... 164s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 164s Selecting previously unselected package zlib1g-dev:ppc64el. 164s Preparing to unpack .../109-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 164s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 164s Selecting previously unselected package libpng-dev:ppc64el. 164s Preparing to unpack .../110-libpng-dev_1.6.43-1_ppc64el.deb ... 164s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 164s Selecting previously unselected package libpotrace0:ppc64el. 164s Preparing to unpack .../111-libpotrace0_1.16-2_ppc64el.deb ... 164s Unpacking libpotrace0:ppc64el (1.16-2) ... 164s Selecting previously unselected package libptexenc1:ppc64el. 164s Preparing to unpack .../112-libptexenc1_2023.20230311.66589-9_ppc64el.deb ... 164s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9) ... 164s Selecting previously unselected package libreadline-dev:ppc64el. 164s Preparing to unpack .../113-libreadline-dev_8.2-3_ppc64el.deb ... 164s Unpacking libreadline-dev:ppc64el (8.2-3) ... 164s Selecting previously unselected package libsharpyuv0:ppc64el. 164s Preparing to unpack .../114-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 164s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 164s Selecting previously unselected package libsm6:ppc64el. 164s Preparing to unpack .../115-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 164s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 164s Selecting previously unselected package libsynctex2:ppc64el. 164s Preparing to unpack .../116-libsynctex2_2023.20230311.66589-9_ppc64el.deb ... 164s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9) ... 164s Selecting previously unselected package libtcl8.6:ppc64el. 164s Preparing to unpack .../117-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 164s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 164s Selecting previously unselected package libteckit0:ppc64el. 164s Preparing to unpack .../118-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 164s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 164s Selecting previously unselected package libtexlua53-5:ppc64el. 164s Preparing to unpack .../119-libtexlua53-5_2023.20230311.66589-9_ppc64el.deb ... 164s Unpacking libtexlua53-5:ppc64el (2023.20230311.66589-9) ... 164s Selecting previously unselected package libjbig0:ppc64el. 164s Preparing to unpack .../120-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 164s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 164s Selecting previously unselected package libwebp7:ppc64el. 164s Preparing to unpack .../121-libwebp7_1.3.2-0.4_ppc64el.deb ... 164s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 164s Selecting previously unselected package libtiff6:ppc64el. 164s Preparing to unpack .../122-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 164s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 165s Selecting previously unselected package libxft2:ppc64el. 165s Preparing to unpack .../123-libxft2_2.3.6-1_ppc64el.deb ... 165s Unpacking libxft2:ppc64el (2.3.6-1) ... 165s Selecting previously unselected package libxss1:ppc64el. 165s Preparing to unpack .../124-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 165s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 165s Selecting previously unselected package libtk8.6:ppc64el. 165s Preparing to unpack .../125-libtk8.6_8.6.13-2_ppc64el.deb ... 165s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 165s Selecting previously unselected package libxt6:ppc64el. 165s Preparing to unpack .../126-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 165s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 165s Selecting previously unselected package libxmu6:ppc64el. 165s Preparing to unpack .../127-libxmu6_2%3a1.1.3-3_ppc64el.deb ... 165s Unpacking libxmu6:ppc64el (2:1.1.3-3) ... 165s Selecting previously unselected package libxpm4:ppc64el. 165s Preparing to unpack .../128-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 165s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 165s Selecting previously unselected package libxaw7:ppc64el. 165s Preparing to unpack .../129-libxaw7_2%3a1.0.14-1_ppc64el.deb ... 165s Unpacking libxaw7:ppc64el (2:1.0.14-1) ... 165s Selecting previously unselected package libxi6:ppc64el. 165s Preparing to unpack .../130-libxi6_2%3a1.8.1-1_ppc64el.deb ... 165s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 165s Selecting previously unselected package libzzip-0-13:ppc64el. 165s Preparing to unpack .../131-libzzip-0-13_0.13.72+dfsg.1-1.1_ppc64el.deb ... 165s Unpacking libzzip-0-13:ppc64el (0.13.72+dfsg.1-1.1) ... 165s Selecting previously unselected package zip. 165s Preparing to unpack .../132-zip_3.0-13_ppc64el.deb ... 165s Unpacking zip (3.0-13) ... 165s Selecting previously unselected package unzip. 165s Preparing to unpack .../133-unzip_6.0-28ubuntu3_ppc64el.deb ... 165s Unpacking unzip (6.0-28ubuntu3) ... 165s Selecting previously unselected package xdg-utils. 165s Preparing to unpack .../134-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 165s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 165s Selecting previously unselected package r-base-core. 165s Preparing to unpack .../135-r-base-core_4.3.2-1build1_ppc64el.deb ... 165s Unpacking r-base-core (4.3.2-1build1) ... 165s Selecting previously unselected package r-cran-littler. 165s Preparing to unpack .../136-r-cran-littler_0.3.19-1_ppc64el.deb ... 165s Unpacking r-cran-littler (0.3.19-1) ... 165s Selecting previously unselected package littler. 165s Preparing to unpack .../137-littler_0.3.19-1_all.deb ... 165s Unpacking littler (0.3.19-1) ... 165s Selecting previously unselected package node-bootstrap-sass. 165s Preparing to unpack .../138-node-bootstrap-sass_3.4.3-2_all.deb ... 165s Unpacking node-bootstrap-sass (3.4.3-2) ... 165s Selecting previously unselected package node-html5shiv. 165s Preparing to unpack .../139-node-html5shiv_3.7.3+dfsg-5_all.deb ... 165s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 165s Selecting previously unselected package node-normalize.css. 165s Preparing to unpack .../140-node-normalize.css_8.0.1-5_all.deb ... 165s Unpacking node-normalize.css (8.0.1-5) ... 165s Selecting previously unselected package pandoc-data. 165s Preparing to unpack .../141-pandoc-data_3.1.3-1_all.deb ... 165s Unpacking pandoc-data (3.1.3-1) ... 165s Selecting previously unselected package pandoc. 165s Preparing to unpack .../142-pandoc_3.1.3+ds-2_ppc64el.deb ... 165s Unpacking pandoc (3.1.3+ds-2) ... 167s Selecting previously unselected package pkgconf-bin. 167s Preparing to unpack .../143-pkgconf-bin_1.8.1-2_ppc64el.deb ... 167s Unpacking pkgconf-bin (1.8.1-2) ... 167s Selecting previously unselected package pkgconf:ppc64el. 167s Preparing to unpack .../144-pkgconf_1.8.1-2_ppc64el.deb ... 167s Unpacking pkgconf:ppc64el (1.8.1-2) ... 167s Selecting previously unselected package pkg-config:ppc64el. 167s Preparing to unpack .../145-pkg-config_1.8.1-2_ppc64el.deb ... 167s Unpacking pkg-config:ppc64el (1.8.1-2) ... 167s Selecting previously unselected package liblzma-dev:ppc64el. 167s Preparing to unpack .../146-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 167s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 167s Selecting previously unselected package r-base-dev. 167s Preparing to unpack .../147-r-base-dev_4.3.2-1build1_all.deb ... 167s Unpacking r-base-dev (4.3.2-1build1) ... 167s Selecting previously unselected package pkg-r-autopkgtest. 167s Preparing to unpack .../148-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 167s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 167s Selecting previously unselected package r-bioc-biocgenerics. 167s Preparing to unpack .../149-r-bioc-biocgenerics_0.48.1-2_all.deb ... 167s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 167s Selecting previously unselected package r-bioc-biobase. 167s Preparing to unpack .../150-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 167s Unpacking r-bioc-biobase (2.62.0-1) ... 167s Selecting previously unselected package r-bioc-s4vectors. 167s Preparing to unpack .../151-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 167s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 167s Selecting previously unselected package r-bioc-iranges. 167s Preparing to unpack .../152-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 167s Unpacking r-bioc-iranges (2.36.0-1) ... 167s Selecting previously unselected package r-cran-dbi. 167s Preparing to unpack .../153-r-cran-dbi_1.2.2-1_all.deb ... 167s Unpacking r-cran-dbi (1.2.2-1) ... 167s Selecting previously unselected package r-cran-bit. 167s Preparing to unpack .../154-r-cran-bit_4.0.5-1_ppc64el.deb ... 167s Unpacking r-cran-bit (4.0.5-1) ... 167s Selecting previously unselected package r-cran-bit64. 167s Preparing to unpack .../155-r-cran-bit64_4.0.5-1_ppc64el.deb ... 167s Unpacking r-cran-bit64 (4.0.5-1) ... 167s Selecting previously unselected package r-cran-rlang. 167s Preparing to unpack .../156-r-cran-rlang_1.1.3-1_ppc64el.deb ... 167s Unpacking r-cran-rlang (1.1.3-1) ... 167s Selecting previously unselected package r-cran-cli. 167s Preparing to unpack .../157-r-cran-cli_3.6.2-1_ppc64el.deb ... 167s Unpacking r-cran-cli (3.6.2-1) ... 167s Selecting previously unselected package r-cran-glue. 167s Preparing to unpack .../158-r-cran-glue_1.7.0-1_ppc64el.deb ... 167s Unpacking r-cran-glue (1.7.0-1) ... 167s Selecting previously unselected package r-cran-lifecycle. 167s Preparing to unpack .../159-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 167s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 167s Selecting previously unselected package r-cran-vctrs. 167s Preparing to unpack .../160-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 167s Unpacking r-cran-vctrs (0.6.5-1) ... 168s Selecting previously unselected package r-cran-blob. 168s Preparing to unpack .../161-r-cran-blob_1.2.4-1_all.deb ... 168s Unpacking r-cran-blob (1.2.4-1) ... 168s Selecting previously unselected package r-cran-fastmap. 168s Preparing to unpack .../162-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 168s Unpacking r-cran-fastmap (1.1.1-1) ... 168s Selecting previously unselected package r-cran-cachem. 168s Preparing to unpack .../163-r-cran-cachem_1.0.8-1_ppc64el.deb ... 168s Unpacking r-cran-cachem (1.0.8-1) ... 168s Selecting previously unselected package r-cran-memoise. 168s Preparing to unpack .../164-r-cran-memoise_2.0.1-1_all.deb ... 168s Unpacking r-cran-memoise (2.0.1-1) ... 168s Selecting previously unselected package r-cran-pkgconfig. 168s Preparing to unpack .../165-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 168s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 168s Selecting previously unselected package r-cran-plogr. 168s Preparing to unpack .../166-r-cran-plogr_0.2.0-3build1_all.deb ... 168s Unpacking r-cran-plogr (0.2.0-3build1) ... 168s Selecting previously unselected package r-cran-cpp11. 168s Preparing to unpack .../167-r-cran-cpp11_0.4.7-1_all.deb ... 168s Unpacking r-cran-cpp11 (0.4.7-1) ... 168s Selecting previously unselected package r-cran-rsqlite. 168s Preparing to unpack .../168-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 168s Unpacking r-cran-rsqlite (2.3.4-1) ... 168s Selecting previously unselected package r-cran-curl. 168s Preparing to unpack .../169-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 168s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 168s Selecting previously unselected package r-cran-jsonlite. 168s Preparing to unpack .../170-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 168s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 168s Selecting previously unselected package r-cran-mime. 168s Preparing to unpack .../171-r-cran-mime_0.12-1_ppc64el.deb ... 168s Unpacking r-cran-mime (0.12-1) ... 168s Selecting previously unselected package r-cran-sys. 168s Preparing to unpack .../172-r-cran-sys_3.4.2-1_ppc64el.deb ... 168s Unpacking r-cran-sys (3.4.2-1) ... 168s Selecting previously unselected package r-cran-askpass. 168s Preparing to unpack .../173-r-cran-askpass_1.2.0-1_ppc64el.deb ... 168s Unpacking r-cran-askpass (1.2.0-1) ... 168s Selecting previously unselected package r-cran-openssl. 168s Preparing to unpack .../174-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 168s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 168s Selecting previously unselected package r-cran-r6. 168s Preparing to unpack .../175-r-cran-r6_2.5.1-1_all.deb ... 168s Unpacking r-cran-r6 (2.5.1-1) ... 168s Selecting previously unselected package r-cran-httr. 168s Preparing to unpack .../176-r-cran-httr_1.4.7+dfsg-1_all.deb ... 168s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 168s Selecting previously unselected package r-cran-png. 168s Preparing to unpack .../177-r-cran-png_0.1-8-1_ppc64el.deb ... 168s Unpacking r-cran-png (0.1-8-1) ... 168s Selecting previously unselected package r-bioc-zlibbioc. 168s Preparing to unpack .../178-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 168s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 168s Selecting previously unselected package r-bioc-xvector. 168s Preparing to unpack .../179-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 168s Unpacking r-bioc-xvector (0.42.0-1) ... 168s Selecting previously unselected package r-cran-bitops. 168s Preparing to unpack .../180-r-cran-bitops_1.0-7-1_ppc64el.deb ... 168s Unpacking r-cran-bitops (1.0-7-1) ... 168s Selecting previously unselected package r-cran-rcurl. 168s Preparing to unpack .../181-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 168s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 168s Selecting previously unselected package r-bioc-genomeinfodbdata. 168s Preparing to unpack .../182-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 168s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 168s Selecting previously unselected package r-bioc-genomeinfodb. 168s Preparing to unpack .../183-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 168s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 168s Selecting previously unselected package r-cran-crayon. 168s Preparing to unpack .../184-r-cran-crayon_1.5.2-1_all.deb ... 168s Unpacking r-cran-crayon (1.5.2-1) ... 168s Selecting previously unselected package r-bioc-biostrings. 168s Preparing to unpack .../185-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 168s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 168s Selecting previously unselected package r-bioc-keggrest. 168s Preparing to unpack .../186-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 168s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 168s Selecting previously unselected package r-bioc-annotationdbi. 168s Preparing to unpack .../187-r-bioc-annotationdbi_1.64.1-1_all.deb ... 168s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 169s Selecting previously unselected package r-cran-generics. 169s Preparing to unpack .../188-r-cran-generics_0.1.3-1_all.deb ... 169s Unpacking r-cran-generics (0.1.3-1) ... 169s Selecting previously unselected package r-cran-magrittr. 169s Preparing to unpack .../189-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 169s Unpacking r-cran-magrittr (2.0.3-1) ... 169s Selecting previously unselected package r-cran-fansi. 169s Preparing to unpack .../190-r-cran-fansi_1.0.5-1_ppc64el.deb ... 169s Unpacking r-cran-fansi (1.0.5-1) ... 169s Selecting previously unselected package r-cran-utf8. 169s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_ppc64el.deb ... 169s Unpacking r-cran-utf8 (1.2.4-1) ... 169s Selecting previously unselected package r-cran-pillar. 169s Preparing to unpack .../192-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 169s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 169s Selecting previously unselected package r-cran-tibble. 169s Preparing to unpack .../193-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 169s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 169s Selecting previously unselected package r-cran-withr. 169s Preparing to unpack .../194-r-cran-withr_2.5.0-1_all.deb ... 169s Unpacking r-cran-withr (2.5.0-1) ... 169s Selecting previously unselected package r-cran-tidyselect. 169s Preparing to unpack .../195-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 169s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 169s Selecting previously unselected package r-cran-dplyr. 169s Preparing to unpack .../196-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 169s Unpacking r-cran-dplyr (1.1.4-1) ... 169s Selecting previously unselected package r-cran-purrr. 169s Preparing to unpack .../197-r-cran-purrr_1.0.2-1_ppc64el.deb ... 169s Unpacking r-cran-purrr (1.0.2-1) ... 169s Selecting previously unselected package r-cran-stringi. 169s Preparing to unpack .../198-r-cran-stringi_1.8.3-1_ppc64el.deb ... 169s Unpacking r-cran-stringi (1.8.3-1) ... 169s Selecting previously unselected package r-cran-stringr. 169s Preparing to unpack .../199-r-cran-stringr_1.5.1-1_all.deb ... 169s Unpacking r-cran-stringr (1.5.1-1) ... 169s Selecting previously unselected package r-cran-tidyr. 169s Preparing to unpack .../200-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 169s Unpacking r-cran-tidyr (1.3.1-1) ... 169s Selecting previously unselected package r-cran-dbplyr. 169s Preparing to unpack .../201-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 169s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 169s Selecting previously unselected package r-cran-filelock. 169s Preparing to unpack .../202-r-cran-filelock_1.0.3-1_ppc64el.deb ... 169s Unpacking r-cran-filelock (1.0.3-1) ... 169s Selecting previously unselected package r-bioc-biocfilecache. 169s Preparing to unpack .../203-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 169s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 169s Selecting previously unselected package r-bioc-biocio. 169s Preparing to unpack .../204-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 169s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 169s Selecting previously unselected package r-cran-formatr. 169s Preparing to unpack .../205-r-cran-formatr_1.14-1_all.deb ... 169s Unpacking r-cran-formatr (1.14-1) ... 169s Selecting previously unselected package r-cran-lambda.r. 169s Preparing to unpack .../206-r-cran-lambda.r_1.2.4-2build1_all.deb ... 169s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 169s Selecting previously unselected package r-cran-futile.options. 169s Preparing to unpack .../207-r-cran-futile.options_1.0.1-3build1_all.deb ... 169s Unpacking r-cran-futile.options (1.0.1-3build1) ... 169s Selecting previously unselected package r-cran-futile.logger. 169s Preparing to unpack .../208-r-cran-futile.logger_1.4.3-4build1_all.deb ... 169s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 169s Selecting previously unselected package r-cran-snow. 169s Preparing to unpack .../209-r-cran-snow_1%3a0.4.4-2_all.deb ... 169s Unpacking r-cran-snow (1:0.4.4-2) ... 169s Selecting previously unselected package r-cran-codetools. 169s Preparing to unpack .../210-r-cran-codetools_0.2-19-1_all.deb ... 169s Unpacking r-cran-codetools (0.2-19-1) ... 169s Selecting previously unselected package r-cran-bh. 169s Preparing to unpack .../211-r-cran-bh_1.84.0-1_all.deb ... 169s Unpacking r-cran-bh (1.84.0-1) ... 169s Selecting previously unselected package r-bioc-biocparallel. 169s Preparing to unpack .../212-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 169s Unpacking r-bioc-biocparallel (1.36.0-1) ... 169s Selecting previously unselected package r-cran-base64enc. 169s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 169s Unpacking r-cran-base64enc (0.1-3-3) ... 169s Selecting previously unselected package r-cran-digest. 169s Preparing to unpack .../214-r-cran-digest_0.6.34-1_ppc64el.deb ... 169s Unpacking r-cran-digest (0.6.34-1) ... 169s Selecting previously unselected package r-cran-ellipsis. 169s Preparing to unpack .../215-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 169s Unpacking r-cran-ellipsis (0.3.2-2) ... 169s Selecting previously unselected package r-cran-htmltools. 169s Preparing to unpack .../216-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 169s Unpacking r-cran-htmltools (0.5.7-1) ... 170s Selecting previously unselected package r-cran-evaluate. 170s Preparing to unpack .../217-r-cran-evaluate_0.23-1_all.deb ... 170s Unpacking r-cran-evaluate (0.23-1) ... 170s Selecting previously unselected package r-cran-xfun. 170s Preparing to unpack .../218-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 170s Unpacking r-cran-xfun (0.41+dfsg-1) ... 170s Selecting previously unselected package r-cran-highr. 170s Preparing to unpack .../219-r-cran-highr_0.10+dfsg-1_all.deb ... 170s Unpacking r-cran-highr (0.10+dfsg-1) ... 170s Selecting previously unselected package r-cran-yaml. 170s Preparing to unpack .../220-r-cran-yaml_2.3.8-1_ppc64el.deb ... 170s Unpacking r-cran-yaml (2.3.8-1) ... 170s Selecting previously unselected package libjs-mathjax. 170s Preparing to unpack .../221-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 170s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 171s Selecting previously unselected package r-cran-knitr. 171s Preparing to unpack .../222-r-cran-knitr_1.45+dfsg-1_all.deb ... 171s Unpacking r-cran-knitr (1.45+dfsg-1) ... 171s Selecting previously unselected package r-cran-jquerylib. 171s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 171s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 171s Selecting previously unselected package r-cran-fs. 171s Preparing to unpack .../224-r-cran-fs_1.6.3+dfsg-1_ppc64el.deb ... 171s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 171s Selecting previously unselected package r-cran-rappdirs. 171s Preparing to unpack .../225-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 171s Unpacking r-cran-rappdirs (0.3.3-1) ... 171s Selecting previously unselected package r-cran-sass. 171s Preparing to unpack .../226-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 171s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 171s Selecting previously unselected package r-cran-bslib. 171s Preparing to unpack .../227-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 171s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 171s Selecting previously unselected package r-cran-fontawesome. 171s Preparing to unpack .../228-r-cran-fontawesome_0.5.2-1_all.deb ... 171s Unpacking r-cran-fontawesome (0.5.2-1) ... 171s Selecting previously unselected package r-cran-tinytex. 171s Preparing to unpack .../229-r-cran-tinytex_0.49-1_all.deb ... 171s Unpacking r-cran-tinytex (0.49-1) ... 171s Selecting previously unselected package libjs-modernizr. 171s Preparing to unpack .../230-libjs-modernizr_2.6.2+ds1-5_all.deb ... 171s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 171s Selecting previously unselected package r-cran-pkgkitten. 171s Preparing to unpack .../231-r-cran-pkgkitten_0.2.3-1_all.deb ... 171s Unpacking r-cran-pkgkitten (0.2.3-1) ... 171s Selecting previously unselected package r-cran-rcpp. 171s Preparing to unpack .../232-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 171s Unpacking r-cran-rcpp (1.0.12-1) ... 172s Selecting previously unselected package r-cran-later. 172s Preparing to unpack .../233-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 172s Unpacking r-cran-later (1.3.2+dfsg-1) ... 172s Selecting previously unselected package r-cran-promises. 172s Preparing to unpack .../234-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 172s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 172s Selecting previously unselected package r-cran-httpuv. 172s Preparing to unpack .../235-r-cran-httpuv_1.6.14+dfsg-1_ppc64el.deb ... 172s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 172s Selecting previously unselected package r-cran-xtable. 172s Preparing to unpack .../236-r-cran-xtable_1%3a1.8-4-2_all.deb ... 172s Unpacking r-cran-xtable (1:1.8-4-2) ... 172s Selecting previously unselected package r-cran-sourcetools. 172s Preparing to unpack .../237-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 172s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 172s Selecting previously unselected package r-cran-commonmark. 172s Preparing to unpack .../238-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 172s Unpacking r-cran-commonmark (1.9.1-1) ... 172s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 172s Preparing to unpack .../239-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 172s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 172s Selecting previously unselected package r-cran-shiny. 172s Preparing to unpack .../240-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 172s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 172s Selecting previously unselected package r-cran-rmarkdown. 172s Preparing to unpack .../241-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 172s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 172s Selecting previously unselected package r-cran-bookdown. 172s Preparing to unpack .../242-r-cran-bookdown_0.37+dfsg-1_all.deb ... 172s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 172s Selecting previously unselected package r-cran-biocmanager. 172s Preparing to unpack .../243-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 172s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 172s Selecting previously unselected package tex-common. 172s Preparing to unpack .../244-tex-common_6.18_all.deb ... 172s Unpacking tex-common (6.18) ... 172s Selecting previously unselected package t1utils. 172s Preparing to unpack .../245-t1utils_1.41-4build2_ppc64el.deb ... 172s Unpacking t1utils (1.41-4build2) ... 172s Selecting previously unselected package texlive-binaries. 172s Preparing to unpack .../246-texlive-binaries_2023.20230311.66589-9_ppc64el.deb ... 172s Unpacking texlive-binaries (2023.20230311.66589-9) ... 173s Selecting previously unselected package texlive-base. 173s Preparing to unpack .../247-texlive-base_2023.20240207-1_all.deb ... 173s Unpacking texlive-base (2023.20240207-1) ... 175s Selecting previously unselected package texlive-latex-base. 175s Preparing to unpack .../248-texlive-latex-base_2023.20240207-1_all.deb ... 175s Unpacking texlive-latex-base (2023.20240207-1) ... 175s Selecting previously unselected package texlive-bibtex-extra. 175s Preparing to unpack .../249-texlive-bibtex-extra_2023.20240207-1_all.deb ... 175s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 182s Selecting previously unselected package r-bioc-biocstyle. 182s Preparing to unpack .../250-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 182s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 182s Selecting previously unselected package r-cran-xml. 182s Preparing to unpack .../251-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 182s Unpacking r-cran-xml (3.99-0.16.1-1) ... 182s Selecting previously unselected package r-cran-hms. 182s Preparing to unpack .../252-r-cran-hms_1.1.3-1_all.deb ... 182s Unpacking r-cran-hms (1.1.3-1) ... 182s Selecting previously unselected package r-cran-prettyunits. 182s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 182s Unpacking r-cran-prettyunits (1.2.0-1) ... 182s Selecting previously unselected package r-cran-progress. 182s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 182s Unpacking r-cran-progress (1.2.3-1) ... 182s Selecting previously unselected package r-cran-xml2. 182s Preparing to unpack .../255-r-cran-xml2_1.3.6-1_ppc64el.deb ... 182s Unpacking r-cran-xml2 (1.3.6-1) ... 182s Selecting previously unselected package r-bioc-biomart. 182s Preparing to unpack .../256-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 182s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 182s Selecting previously unselected package r-cran-lattice. 182s Preparing to unpack .../257-r-cran-lattice_0.22-5-1_ppc64el.deb ... 182s Unpacking r-cran-lattice (0.22-5-1) ... 182s Selecting previously unselected package r-cran-matrix. 182s Preparing to unpack .../258-r-cran-matrix_1.6-5-1_ppc64el.deb ... 182s Unpacking r-cran-matrix (1.6-5-1) ... 183s Selecting previously unselected package r-cran-matrixstats. 183s Preparing to unpack .../259-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 183s Unpacking r-cran-matrixstats (1.2.0-1) ... 183s Selecting previously unselected package r-bioc-matrixgenerics. 183s Preparing to unpack .../260-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 183s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 183s Selecting previously unselected package r-cran-abind. 183s Preparing to unpack .../261-r-cran-abind_1.4-5-2_all.deb ... 183s Unpacking r-cran-abind (1.4-5-2) ... 183s Selecting previously unselected package r-bioc-s4arrays. 183s Preparing to unpack .../262-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 183s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 183s Selecting previously unselected package r-bioc-sparsearray. 183s Preparing to unpack .../263-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 183s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 183s Selecting previously unselected package r-bioc-delayedarray. 183s Preparing to unpack .../264-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 183s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 183s Selecting previously unselected package r-bioc-genomicranges. 183s Preparing to unpack .../265-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 183s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 183s Selecting previously unselected package r-bioc-summarizedexperiment. 183s Preparing to unpack .../266-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 183s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 183s Selecting previously unselected package r-bioc-rhtslib. 183s Preparing to unpack .../267-r-bioc-rhtslib_2.4.1+dfsg-3build1_ppc64el.deb ... 183s Unpacking r-bioc-rhtslib (2.4.1+dfsg-3build1) ... 183s Selecting previously unselected package r-bioc-rsamtools. 183s Preparing to unpack .../268-r-bioc-rsamtools_2.18.0+dfsg-1_ppc64el.deb ... 183s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 183s Selecting previously unselected package r-bioc-genomicalignments. 183s Preparing to unpack .../269-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 183s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 183s Selecting previously unselected package r-cran-rjson. 183s Preparing to unpack .../270-r-cran-rjson_0.2.21-1_ppc64el.deb ... 183s Unpacking r-cran-rjson (0.2.21-1) ... 183s Selecting previously unselected package r-cran-restfulr. 183s Preparing to unpack .../271-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 183s Unpacking r-cran-restfulr (0.0.15-1) ... 183s Selecting previously unselected package r-bioc-rtracklayer. 183s Preparing to unpack .../272-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 183s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 183s Selecting previously unselected package r-bioc-genomicfeatures. 183s Preparing to unpack .../273-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 183s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 183s Selecting previously unselected package r-cran-hwriter. 183s Preparing to unpack .../274-r-cran-hwriter_1.3.2.1-1_all.deb ... 183s Unpacking r-cran-hwriter (1.3.2.1-1) ... 183s Selecting previously unselected package r-cran-jpeg. 183s Preparing to unpack .../275-r-cran-jpeg_0.1-10-1_ppc64el.deb ... 183s Unpacking r-cran-jpeg (0.1-10-1) ... 183s Selecting previously unselected package r-cran-rcolorbrewer. 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up r-bioc-biobase (2.62.0-1) ... 190s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 190s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 190s Setting up r-cran-utf8 (1.2.4-1) ... 190s Setting up gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 190s Setting up r-cran-stringi (1.8.3-1) ... 190s Setting up texlive-latex-base (2023.20240207-1) ... 190s Setting up r-cran-hwriter (1.3.2.1-1) ... 190s Setting up r-cran-cpp11 (0.4.7-1) ... 190s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 190s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 190s Setting up r-cran-runit (0.4.32-3) ... 190s Setting up r-cran-futile.logger (1.4.3-4build1) ... 190s Setting up r-cran-later (1.3.2+dfsg-1) ... 190s Setting up r-cran-matrix (1.6-5-1) ... 190s Setting up r-cran-tinytex (0.49-1) ... 190s Setting up r-cran-knitr (1.45+dfsg-1) ... 190s Setting up g++ (4:13.2.0-7ubuntu1) ... 190s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 190s Setting up r-cran-cachem 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update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 190s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 190s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 190s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 190s Setting up texlive-bibtex-extra (2023.20240207-1) ... 190s Setting up r-cran-interp (1.1-6-1) ... 190s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 190s Setting up r-cran-httr (1.4.7+dfsg-1) ... 190s Setting up r-cran-hms (1.1.3-1) ... 190s Setting up r-cran-memoise (2.0.1-1) ... 190s Setting up r-cran-promises (1.2.1+dfsg-1) ... 190s Setting up r-cran-purrr (1.0.2-1) ... 190s Setting up r-cran-blob (1.2.4-1) ... 190s Setting up r-cran-htmltools (0.5.7-1) ... 190s Setting up r-bioc-xvector (0.42.0-1) ... 190s Setting up r-cran-sass (0.4.8+dfsg-1) ... 190s Setting up r-cran-dplyr (1.1.4-1) ... 190s Setting up r-cran-rsqlite (2.3.4-1) ... 190s Setting up r-cran-progress (1.2.3-1) ... 190s Setting up r-base-dev (4.3.2-1build1) ... 190s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 190s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 190s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 190s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 190s Setting up r-cran-fontawesome (0.5.2-1) ... 190s Setting up r-cran-latticeextra (0.6-30-1) ... 190s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 190s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 190s Setting up r-cran-tidyr (1.3.1-1) ... 190s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 190s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 190s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 190s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 190s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 190s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 190s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 190s Setting up r-bioc-annotationdbi (1.64.1-1) ... 190s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 190s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 190s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 190s Setting up r-bioc-genomicalignments (1.38.2-1) ... 190s Setting up r-cran-bookdown (0.37+dfsg-1) ... 190s Setting up r-bioc-rtracklayer (1.62.0-1) ... 190s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 190s Setting up r-bioc-shortread (1.60.0-2) ... 190s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 190s Setting up autopkgtest-satdep (0) ... 190s Processing triggers for man-db (2.12.0-3) ... 191s Processing triggers for install-info (7.1-3) ... 192s Processing triggers for libc-bin (2.39-0ubuntu2) ... 192s Processing triggers for tex-common (6.18) ... 192s Running updmap-sys. This may take some time... done. 192s Running mktexlsr /var/lib/texmf ... done. 192s Building format(s) --all. 242s This may take some time... done. 252s (Reading database ... 120280 files and directories currently installed.) 252s Removing autopkgtest-satdep (0) ... 252s autopkgtest [21:31:25]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 252s autopkgtest [21:31:25]: test pkg-r-autopkgtest: [----------------------- 252s Test: Try to load the R library ShortRead 252s 252s R version 4.3.2 (2023-10-31) -- "Eye Holes" 252s Copyright (C) 2023 The R Foundation for Statistical Computing 252s Platform: powerpc64le-unknown-linux-gnu (64-bit) 252s 252s R is free software and comes with ABSOLUTELY NO WARRANTY. 252s You are welcome to redistribute it under certain conditions. 252s Type 'license()' or 'licence()' for distribution details. 252s 252s R is a collaborative project with many contributors. 252s Type 'contributors()' for more information and 252s 'citation()' on how to cite R or R packages in publications. 252s 252s Type 'demo()' for some demos, 'help()' for on-line help, or 252s 'help.start()' for an HTML browser interface to help. 252s Type 'q()' to quit R. 252s 253s > library('ShortRead') 253s Loading required package: BiocGenerics 253s 253s Attaching package: ‘BiocGenerics’ 253s 253s The following objects are masked from ‘package:stats’: 253s 253s IQR, mad, sd, var, xtabs 253s 253s The following objects are masked from ‘package:base’: 253s 253s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 253s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 253s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 253s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 253s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 253s table, tapply, union, unique, unsplit, which.max, which.min 253s 253s Loading required package: BiocParallel 253s Loading required package: Biostrings 253s Loading required package: S4Vectors 253s Loading required package: stats4 254s 254s Attaching package: ‘S4Vectors’ 254s 254s The following object is masked from ‘package:utils’: 254s 254s findMatches 254s 254s The following objects are masked from ‘package:base’: 254s 254s expand.grid, I, unname 254s 254s Loading required package: IRanges 254s Loading required package: XVector 255s Loading required package: GenomeInfoDb 256s 256s Attaching package: ‘Biostrings’ 256s 256s The following object is masked from ‘package:base’: 256s 256s strsplit 256s 256s Loading required package: Rsamtools 256s Loading required package: GenomicRanges 256s Loading required package: GenomicAlignments 256s Loading required package: SummarizedExperiment 256s Loading required package: MatrixGenerics 256s Loading required package: matrixStats 256s 256s Attaching package: ‘MatrixGenerics’ 256s 256s The following objects are masked from ‘package:matrixStats’: 256s 256s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 256s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 256s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 256s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 256s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 256s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 256s colWeightedMeans, colWeightedMedians, colWeightedSds, 256s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 256s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 256s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 256s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 256s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 256s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 256s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 256s rowWeightedSds, rowWeightedVars 256s 256s Loading required package: Biobase 257s Welcome to Bioconductor 257s 257s Vignettes contain introductory material; view with 257s 'browseVignettes()'. To cite Bioconductor, see 257s 'citation("Biobase")', and for packages 'citation("pkgname")'. 257s 257s 257s Attaching package: ‘Biobase’ 257s 257s The following object is masked from ‘package:MatrixGenerics’: 257s 257s rowMedians 257s 257s The following objects are masked from ‘package:matrixStats’: 257s 257s anyMissing, rowMedians 257s 262s > 262s > 262s Other tests are currently unsupported! 262s They will be progressively added. 262s autopkgtest [21:31:35]: test pkg-r-autopkgtest: -----------------------] 263s autopkgtest [21:31:36]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 263s pkg-r-autopkgtest PASS 263s autopkgtest [21:31:36]: @@@@@@@@@@@@@@@@@@@@ summary 263s pkg-r-autopkgtest PASS 274s Creating nova instance adt-noble-ppc64el-r-bioc-shortread-20240317-212712-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...