0s autopkgtest [22:32:25]: starting date and time: 2024-03-17 22:32:25+0000 0s autopkgtest [22:32:25]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [22:32:25]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a1abh20u/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rcurl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-rtracklayer --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rcurl/1.98-1.14+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-20.secgroup --name adt-noble-ppc64el-r-bioc-rtracklayer-20240317-223224-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 78s autopkgtest [22:33:43]: testbed dpkg architecture: ppc64el 78s autopkgtest [22:33:43]: testbed apt version: 2.7.12 78s autopkgtest [22:33:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup 79s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 79s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 80s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [485 kB] 80s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 80s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3691 kB] 80s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 80s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 80s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 80s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 80s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3978 kB] 80s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 80s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 80s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 83s Fetched 9033 kB in 2s (4130 kB/s) 84s Reading package lists... 86s Reading package lists... 86s Building dependency tree... 86s Reading state information... 86s Calculating upgrade... 86s The following packages will be REMOVED: 86s libssl3 86s The following NEW packages will be installed: 86s libssl3t64 86s The following packages have been kept back: 86s curl 86s The following packages will be upgraded: 86s openssl 86s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 86s Need to get 3195 kB of archives. 86s After this operation, 6144 B of additional disk space will be used. 86s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 87s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 88s Fetched 3195 kB in 1s (2812 kB/s) 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 88s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 88s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 88s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 88s wget depends on libssl3 (>= 3.0.0). 88s tnftp depends on libssl3 (>= 3.0.0). 88s tcpdump depends on libssl3 (>= 3.0.0). 88s systemd-resolved depends on libssl3 (>= 3.0.0). 88s systemd depends on libssl3 (>= 3.0.0). 88s sudo depends on libssl3 (>= 3.0.0). 88s rsync depends on libssl3 (>= 3.0.0). 88s python3-cryptography depends on libssl3 (>= 3.0.0). 88s openssh-server depends on libssl3 (>= 3.0.10). 88s openssh-client depends on libssl3 (>= 3.0.10). 88s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 88s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 88s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 88s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 88s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 88s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 88s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 88s libnvme1 depends on libssl3 (>= 3.0.0). 88s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 88s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 88s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 88s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 88s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 88s kmod depends on libssl3 (>= 3.0.0). 88s dhcpcd-base depends on libssl3 (>= 3.0.0). 88s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 88s 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 88s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 88s Selecting previously unselected package libssl3t64:ppc64el. 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 88s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 88s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 88s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 88s Setting up openssl (3.0.13-0ubuntu1) ... 88s Processing triggers for man-db (2.12.0-3) ... 89s Processing triggers for libc-bin (2.39-0ubuntu2) ... 89s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 90s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 90s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 90s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 90s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 91s Reading package lists... 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 92s Calculating upgrade... 92s The following packages have been kept back: 92s curl 92s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 92s Reading package lists... 92s Building dependency tree... 92s Reading state information... 92s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 95s autopkgtest [22:34:00]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 95s autopkgtest [22:34:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rtracklayer 97s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rtracklayer 1.62.0-1 (dsc) [2398 B] 97s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rtracklayer 1.62.0-1 (tar) [4019 kB] 97s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rtracklayer 1.62.0-1 (diff) [27.2 kB] 97s gpgv: Signature made Thu Nov 30 17:25:54 2023 UTC 97s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 97s gpgv: issuer "tillea@rki.de" 97s gpgv: Can't check signature: No public key 97s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rtracklayer_1.62.0-1.dsc: no acceptable signature found 97s autopkgtest [22:34:02]: testing package r-bioc-rtracklayer version 1.62.0-1 98s autopkgtest [22:34:03]: build not needed 100s autopkgtest [22:34:05]: test pkg-r-autopkgtest: preparing testbed 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s Starting pkgProblemResolver with broken count: 0 101s Starting 2 pkgProblemResolver with broken count: 0 101s Done 101s The following additional packages will be installed: 101s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 101s cpp-powerpc64le-linux-gnu curl dctrl-tools fontconfig fontconfig-config 101s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-powerpc64le-linux-gnu 101s g++-powerpc64le-linux-gnu gcc gcc-13 gcc-13-powerpc64le-linux-gnu 101s gcc-powerpc64le-linux-gnu gfortran gfortran-13 101s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 101s icu-devtools libasan8 libatomic1 libblas-dev libblas3 libboost-dev 101s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 101s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 101s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 101s libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 101s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery liblapack-dev 101s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 101s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 101s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 101s libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 libquadmath0 libreadline-dev 101s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 101s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 101s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev node-html5shiv 101s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 101s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 101s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biomart 101s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-genefilter 101s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 101s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 101s r-bioc-limma r-bioc-matrixgenerics r-bioc-org.hs.eg.db r-bioc-rhtslib 101s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 101s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-xvector 101s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-bh r-cran-bit 101s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem r-cran-cli 101s r-cran-codetools r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 101s r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-fansi r-cran-fastmap 101s r-cran-filelock r-cran-formatr r-cran-futile.logger r-cran-futile.options 101s r-cran-generics r-cran-glue r-cran-hms r-cran-httr r-cran-jsonlite 101s r-cran-lambda.r r-cran-lattice r-cran-lifecycle r-cran-littler 101s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 101s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-plogr r-cran-png 101s r-cran-prettyunits r-cran-progress r-cran-purrr r-cran-r6 r-cran-rappdirs 101s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rsqlite 101s r-cran-runit r-cran-snow r-cran-statmod r-cran-stringi r-cran-stringr 101s r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 101s r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xml r-cran-xml2 r-cran-xtable 101s r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 101s Suggested packages: 101s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 101s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 101s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 101s liblapack-doc libboost-doc libboost1.83-doc libboost-atomic1.83-dev 101s libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev 101s libboost-contract1.83-dev libboost-coroutine1.83-dev 101s libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev 101s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 101s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 101s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 101s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 101s libboost-numpy1.83-dev libboost-program-options1.83-dev 101s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 101s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 101s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 101s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 101s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 101s glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 101s tcl8.6 tk8.6 nodejs elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 101s texlive-base texlive-latex-base texlive-plain-generic 101s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 101s texlive-latex-recommended texlive-latex-extra texinfo r-bioc-go.db 101s r-bioc-graph r-bioc-biocstyle r-cran-knitr r-bioc-all r-cran-testthat 101s r-cran-rmarkdown r-bioc-affy r-bioc-deseq2 r-cran-foreach r-cran-bbmisc 101s r-cran-doparallel r-bioc-variantannotation r-bioc-shortread 101s r-cran-batchtools r-cran-data.table r-cran-mockery r-cran-webmockr 101s r-cran-biocmanager r-bioc-hdf5array r-cran-lobstr r-bioc-delayedmatrixstats 101s r-cran-class r-cran-rcolorbrewer r-cran-r.utils r-bioc-edger 101s r-bioc-ensembldb r-bioc-annotationfilter r-cran-markdown r-bioc-gviz 101s r-bioc-annotationhub r-bioc-dexseq r-cran-biasedurn r-cran-ellipse 101s r-cran-gplots r-cran-locfit r-cran-mass r-bioc-sparsematrixstats 101s r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-rstudioapi 101s r-cran-rmysql r-cran-shiny r-cran-lubridate r-cran-getopt r-cran-formattable 101s r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins r-cran-scales 101s r-cran-units r-cran-vdiffr r-cran-rcpp r-cran-rmpi r-cran-rlecuyer 101s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-evaluate 101s r-cran-here r-cran-htmltools r-cran-pkgbuild r-cran-pkgload r-cran-plm 101s r-cran-zoo 101s Recommended packages: 101s bzip2-doc manpages manpages-dev libc-devtools javascript-common libpng-tools 101s r-recommended r-doc-html r-cran-testthat r-cran-callr r-cran-covr 101s r-cran-htmltools r-cran-htmlwidgets r-cran-knitr r-cran-mockery 101s r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-rprojroot 101s r-cran-rstudioapi r-cran-whoami r-cran-bench r-cran-brio r-cran-decor 101s r-cran-desc r-cran-ggplot2 r-cran-lobstr r-cran-scales r-cran-rcpp 101s r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils 101s r-cran-rpostgresql r-cran-broom r-cran-rmysql r-cran-unitizer r-cran-testit 101s r-cran-pkgload r-cran-waldo r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf 101s r-cran-lintr r-cran-tidyverse r-cran-base64enc r-cran-markdown 101s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-fs r-cran-usethis 101s r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest r-cran-data.table 101s r-cran-mockr r-cran-formattable r-cran-pkgdown r-cran-zeallot 101s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 101s x11-xserver-utils 101s The following packages will be REMOVED: 101s libcurl4 libpsl5 101s The following NEW packages will be installed: 101s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 101s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 101s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-powerpc64le-linux-gnu 101s g++-powerpc64le-linux-gnu gcc gcc-13 gcc-13-powerpc64le-linux-gnu 101s gcc-powerpc64le-linux-gnu gfortran gfortran-13 101s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 101s icu-devtools libasan8 libatomic1 libblas-dev libblas3 libboost-dev 101s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 101s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 101s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 101s libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 101s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery liblapack-dev 101s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 101s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 101s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 101s libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 libquadmath0 libreadline-dev 101s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 101s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 101s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev node-html5shiv 101s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 101s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 101s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biomart 101s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-genefilter 101s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 101s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 101s r-bioc-limma r-bioc-matrixgenerics r-bioc-org.hs.eg.db r-bioc-rhtslib 101s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 101s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-xvector 101s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-bh r-cran-bit 101s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem r-cran-cli 101s r-cran-codetools r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 101s r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-fansi r-cran-fastmap 101s r-cran-filelock r-cran-formatr r-cran-futile.logger r-cran-futile.options 101s r-cran-generics r-cran-glue r-cran-hms r-cran-httr r-cran-jsonlite 101s r-cran-lambda.r r-cran-lattice r-cran-lifecycle r-cran-littler 101s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 101s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-plogr r-cran-png 101s r-cran-prettyunits r-cran-progress r-cran-purrr r-cran-r6 r-cran-rappdirs 101s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rsqlite 101s r-cran-runit r-cran-snow r-cran-statmod r-cran-stringi r-cran-stringr 101s r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 101s r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xml r-cran-xml2 r-cran-xtable 101s r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 101s The following packages will be upgraded: 101s curl 101s 1 upgraded, 212 newly installed, 2 to remove and 0 not upgraded. 101s Need to get 332 MB/332 MB of archives. 101s After this operation, 1194 MB of additional disk space will be used. 101s Get:1 /tmp/autopkgtest.xbcSyv/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [792 B] 102s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1 [59.0 kB] 102s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu7 [234 kB] 102s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu7 [428 kB] 102s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 102s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 102s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 102s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 102s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 102s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 102s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 103s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 103s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 103s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 104s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 104s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 104s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 104s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 104s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 104s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 104s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 104s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 104s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 104s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 104s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 104s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 104s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 104s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 105s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 105s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 105s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 105s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 105s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 105s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 105s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 105s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 105s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 105s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 105s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 105s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 105s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 105s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 105s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 105s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 105s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 105s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 106s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 106s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 106s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 106s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 106s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 106s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 106s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 106s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 106s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 106s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 106s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 106s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 106s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 106s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 106s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 106s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 106s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 106s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 106s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 106s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 106s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 106s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 106s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 106s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 106s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 106s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 106s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 106s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 106s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 107s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 107s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 107s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 107s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 107s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 107s Get:81 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 107s Get:82 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 107s Get:83 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 107s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 107s Get:85 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 107s Get:86 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 107s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 107s Get:88 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 107s Get:89 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 107s Get:90 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 107s Get:91 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 107s Get:92 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 107s Get:93 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 107s Get:94 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 107s Get:95 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 107s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 107s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 107s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 107s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 107s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 107s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 107s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 107s Get:103 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 107s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 107s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 107s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 107s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 107s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 107s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 107s Get:110 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 110s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 110s Get:112 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 110s Get:113 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 110s Get:114 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 110s Get:115 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 111s Get:116 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 111s Get:117 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 111s Get:118 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 111s Get:119 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 111s Get:120 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 111s Get:121 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 111s Get:122 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 111s Get:123 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 112s Get:124 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 112s Get:125 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 112s Get:126 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 112s Get:127 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 112s Get:128 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 112s Get:129 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 112s Get:130 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 112s Get:131 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 112s Get:132 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 112s Get:133 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 112s Get:134 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 112s Get:135 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 112s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 112s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 112s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 112s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 112s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 112s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 112s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 112s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 112s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 112s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 112s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1build1 [797 kB] 112s Get:147 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 113s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 114s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 114s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 115s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 115s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 116s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 116s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 116s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotate all 1.80.0+dfsg-1 [1730 kB] 116s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 116s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 116s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 116s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 116s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 116s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 116s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 116s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 116s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 117s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 117s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 117s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 117s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 117s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 117s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 117s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 117s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 117s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 117s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 117s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 117s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 117s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 117s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 117s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 117s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 117s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 117s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 117s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 117s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 117s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 117s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 117s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 117s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 117s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-1 [1548 kB] 118s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1 [3801 kB] 118s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 118s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 118s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 118s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 119s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 119s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 119s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 119s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 119s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 119s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 119s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 119s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 119s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 119s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 120s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 120s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-bsgenome all 1.70.2-1 [6975 kB] 120s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-survival ppc64el 3.5-8-1 [6160 kB] 121s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genefilter ppc64el 1.84.0-1 [1127 kB] 121s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 121s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-statmod ppc64el 1.5.0-1 [298 kB] 121s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-limma ppc64el 3.58.1+dfsg-1 [1900 kB] 121s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 123s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 123s Preconfiguring packages ... 123s Fetched 332 MB in 22s (15.4 MB/s) 123s dpkg: libpsl5:ppc64el: dependency problems, but removing anyway as you requested: 123s wget depends on libpsl5 (>= 0.16.0). 123s libcurl4:ppc64el depends on libpsl5 (>= 0.16.0). 123s libcurl3-gnutls:ppc64el depends on libpsl5 (>= 0.16.0). 123s 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 123s Removing libpsl5:ppc64el (0.21.2-1build1) ... 123s Selecting previously unselected package libpsl5t64:ppc64el. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70092 files and directories currently installed.) 123s Preparing to unpack .../libpsl5t64_0.21.2-1.1_ppc64el.deb ... 123s Unpacking libpsl5t64:ppc64el (0.21.2-1.1) ... 124s Preparing to unpack .../curl_8.5.0-2ubuntu7_ppc64el.deb ... 124s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70098 files and directories currently installed.) 124s Removing libcurl4:ppc64el (8.5.0-2ubuntu2) ... 124s Selecting previously unselected package libcurl4t64:ppc64el. 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70093 files and directories currently installed.) 124s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_ppc64el.deb ... 124s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 124s Selecting previously unselected package libc-dev-bin. 124s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 124s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 124s Selecting previously unselected package linux-libc-dev:ppc64el. 124s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 124s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 124s Selecting previously unselected package libcrypt-dev:ppc64el. 124s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 124s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 124s Selecting previously unselected package libtirpc-dev:ppc64el. 124s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 124s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 124s Selecting previously unselected package libnsl-dev:ppc64el. 124s Preparing to unpack .../005-libnsl-dev_1.3.0-3_ppc64el.deb ... 124s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 124s Selecting previously unselected package rpcsvc-proto. 124s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 124s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 124s Selecting previously unselected package libc6-dev:ppc64el. 124s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 124s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 124s Selecting previously unselected package libisl23:ppc64el. 124s Preparing to unpack .../008-libisl23_0.26-3_ppc64el.deb ... 124s Unpacking libisl23:ppc64el (0.26-3) ... 124s Selecting previously unselected package libmpc3:ppc64el. 124s Preparing to unpack .../009-libmpc3_1.3.1-1_ppc64el.deb ... 124s Unpacking libmpc3:ppc64el (1.3.1-1) ... 124s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 124s Preparing to unpack .../010-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 124s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 124s Selecting previously unselected package cpp-13. 124s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 124s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 124s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 124s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 124s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 124s Selecting previously unselected package cpp. 124s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 124s Unpacking cpp (4:13.2.0-7ubuntu1) ... 124s Selecting previously unselected package libcc1-0:ppc64el. 124s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 124s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 124s Selecting previously unselected package libgomp1:ppc64el. 124s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 124s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 124s Selecting previously unselected package libitm1:ppc64el. 124s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 124s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 124s Selecting previously unselected package libatomic1:ppc64el. 124s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 124s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 124s Selecting previously unselected package libasan8:ppc64el. 124s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 124s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 125s Selecting previously unselected package liblsan0:ppc64el. 125s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 125s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 125s Selecting previously unselected package libtsan2:ppc64el. 125s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 125s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 125s Selecting previously unselected package libubsan1:ppc64el. 125s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 125s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 125s Selecting previously unselected package libquadmath0:ppc64el. 125s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 125s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 125s Selecting previously unselected package libgcc-13-dev:ppc64el. 125s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 125s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 125s Preparing to unpack .../024-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 125s Selecting previously unselected package gcc-13. 125s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 125s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 125s Preparing to unpack .../026-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 125s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 125s Selecting previously unselected package gcc. 125s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 125s Unpacking gcc (4:13.2.0-7ubuntu1) ... 125s Selecting previously unselected package libstdc++-13-dev:ppc64el. 125s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 125s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 126s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 126s Preparing to unpack .../029-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 126s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 126s Selecting previously unselected package g++-13. 126s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 126s Unpacking g++-13 (13.2.0-17ubuntu2) ... 126s Selecting previously unselected package g++-powerpc64le-linux-gnu. 126s Preparing to unpack .../031-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 126s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 126s Selecting previously unselected package g++. 126s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 126s Unpacking g++ (4:13.2.0-7ubuntu1) ... 126s Selecting previously unselected package build-essential. 126s Preparing to unpack .../033-build-essential_12.10ubuntu1_ppc64el.deb ... 126s Unpacking build-essential (12.10ubuntu1) ... 126s Selecting previously unselected package dctrl-tools. 126s Preparing to unpack .../034-dctrl-tools_2.24-3build2_ppc64el.deb ... 126s Unpacking dctrl-tools (2.24-3build2) ... 126s Selecting previously unselected package fonts-dejavu-mono. 126s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-mono (2.37-8) ... 126s Selecting previously unselected package fonts-dejavu-core. 126s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-core (2.37-8) ... 126s Selecting previously unselected package fontconfig-config. 126s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 126s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 126s Selecting previously unselected package libfontconfig1:ppc64el. 126s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 126s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 126s Selecting previously unselected package fontconfig. 126s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 126s Unpacking fontconfig (2.15.0-1ubuntu1) ... 126s Selecting previously unselected package libgfortran5:ppc64el. 126s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 126s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 126s Selecting previously unselected package libgfortran-13-dev:ppc64el. 126s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 126s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 126s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 126s Preparing to unpack .../042-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 126s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 127s Selecting previously unselected package gfortran-13. 127s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 127s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 127s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 127s Preparing to unpack .../044-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 127s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 127s Selecting previously unselected package gfortran. 127s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 127s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 127s Selecting previously unselected package icu-devtools. 127s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 127s Unpacking icu-devtools (74.2-1ubuntu1) ... 127s Selecting previously unselected package libblas3:ppc64el. 127s Preparing to unpack .../047-libblas3_3.12.0-3_ppc64el.deb ... 127s Unpacking libblas3:ppc64el (3.12.0-3) ... 127s Selecting previously unselected package libblas-dev:ppc64el. 127s Preparing to unpack .../048-libblas-dev_3.12.0-3_ppc64el.deb ... 127s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 127s Selecting previously unselected package libboost1.83-dev:ppc64el. 127s Preparing to unpack .../049-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 127s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 130s Selecting previously unselected package libboost-dev:ppc64el. 130s Preparing to unpack .../050-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 130s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 130s Selecting previously unselected package libbz2-dev:ppc64el. 130s Preparing to unpack .../051-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 130s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 130s Selecting previously unselected package libpixman-1-0:ppc64el. 130s Preparing to unpack .../052-libpixman-1-0_0.42.2-1_ppc64el.deb ... 130s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 130s Selecting previously unselected package libxcb-render0:ppc64el. 130s Preparing to unpack .../053-libxcb-render0_1.15-1_ppc64el.deb ... 130s Unpacking libxcb-render0:ppc64el (1.15-1) ... 130s Selecting previously unselected package libxcb-shm0:ppc64el. 130s Preparing to unpack .../054-libxcb-shm0_1.15-1_ppc64el.deb ... 130s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 130s Selecting previously unselected package libxrender1:ppc64el. 130s Preparing to unpack .../055-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 130s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 130s Selecting previously unselected package libcairo2:ppc64el. 130s Preparing to unpack .../056-libcairo2_1.18.0-1_ppc64el.deb ... 130s Unpacking libcairo2:ppc64el (1.18.0-1) ... 130s Selecting previously unselected package libdatrie1:ppc64el. 130s Preparing to unpack .../057-libdatrie1_0.2.13-3_ppc64el.deb ... 130s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 130s Selecting previously unselected package libdeflate0:ppc64el. 130s Preparing to unpack .../058-libdeflate0_1.19-1_ppc64el.deb ... 130s Unpacking libdeflate0:ppc64el (1.19-1) ... 130s Selecting previously unselected package libgraphite2-3:ppc64el. 130s Preparing to unpack .../059-libgraphite2-3_1.3.14-2_ppc64el.deb ... 130s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 130s Selecting previously unselected package libharfbuzz0b:ppc64el. 130s Preparing to unpack .../060-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 130s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 130s Selecting previously unselected package x11-common. 130s Preparing to unpack .../061-x11-common_1%3a7.7+23ubuntu2_all.deb ... 130s Unpacking x11-common (1:7.7+23ubuntu2) ... 130s Selecting previously unselected package libice6:ppc64el. 130s Preparing to unpack .../062-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 130s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 130s Selecting previously unselected package libicu-dev:ppc64el. 130s Preparing to unpack .../063-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 130s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 130s Selecting previously unselected package libjpeg-turbo8:ppc64el. 130s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 130s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 130s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 130s Preparing to unpack .../065-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 130s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 130s Selecting previously unselected package libjpeg8:ppc64el. 130s Preparing to unpack .../066-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 130s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 130s Selecting previously unselected package libjpeg8-dev:ppc64el. 130s Preparing to unpack .../067-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 130s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 130s Selecting previously unselected package libjpeg-dev:ppc64el. 130s Preparing to unpack .../068-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 130s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 130s Selecting previously unselected package libjs-jquery. 130s Preparing to unpack .../069-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 130s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 130s Selecting previously unselected package liblapack3:ppc64el. 130s Preparing to unpack .../070-liblapack3_3.12.0-3_ppc64el.deb ... 130s Unpacking liblapack3:ppc64el (3.12.0-3) ... 131s Selecting previously unselected package liblapack-dev:ppc64el. 131s Preparing to unpack .../071-liblapack-dev_3.12.0-3_ppc64el.deb ... 131s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 131s Selecting previously unselected package liblerc4:ppc64el. 131s Preparing to unpack .../072-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 131s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 131s Selecting previously unselected package libncurses-dev:ppc64el. 131s Preparing to unpack .../073-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 131s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 131s Selecting previously unselected package libthai-data. 131s Preparing to unpack .../074-libthai-data_0.1.29-2_all.deb ... 131s Unpacking libthai-data (0.1.29-2) ... 131s Selecting previously unselected package libthai0:ppc64el. 131s Preparing to unpack .../075-libthai0_0.1.29-2_ppc64el.deb ... 131s Unpacking libthai0:ppc64el (0.1.29-2) ... 131s Selecting previously unselected package libpango-1.0-0:ppc64el. 131s Preparing to unpack .../076-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 131s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 131s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 131s Preparing to unpack .../077-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 131s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 131s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 131s Preparing to unpack .../078-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 131s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 131s Selecting previously unselected package libpaper1:ppc64el. 131s Preparing to unpack .../079-libpaper1_1.1.29_ppc64el.deb ... 131s Unpacking libpaper1:ppc64el (1.1.29) ... 131s Selecting previously unselected package libpaper-utils. 131s Preparing to unpack .../080-libpaper-utils_1.1.29_ppc64el.deb ... 131s Unpacking libpaper-utils (1.1.29) ... 131s Selecting previously unselected package libpcre2-16-0:ppc64el. 131s Preparing to unpack .../081-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpcre2-32-0:ppc64el. 131s Preparing to unpack .../082-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpcre2-posix3:ppc64el. 131s Preparing to unpack .../083-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpcre2-dev:ppc64el. 131s Preparing to unpack .../084-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 131s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 131s Selecting previously unselected package libpkgconf3:ppc64el. 131s Preparing to unpack .../085-libpkgconf3_1.8.1-2_ppc64el.deb ... 131s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 131s Selecting previously unselected package zlib1g-dev:ppc64el. 131s Preparing to unpack .../086-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 131s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 131s Selecting previously unselected package libpng-dev:ppc64el. 131s Preparing to unpack .../087-libpng-dev_1.6.43-1_ppc64el.deb ... 131s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 131s Selecting previously unselected package libreadline-dev:ppc64el. 131s Preparing to unpack .../088-libreadline-dev_8.2-3_ppc64el.deb ... 131s Unpacking libreadline-dev:ppc64el (8.2-3) ... 131s Selecting previously unselected package libsharpyuv0:ppc64el. 131s Preparing to unpack .../089-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 131s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 131s Selecting previously unselected package libsm6:ppc64el. 131s Preparing to unpack .../090-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 131s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 131s Selecting previously unselected package libtcl8.6:ppc64el. 131s Preparing to unpack .../091-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 131s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 131s Selecting previously unselected package libjbig0:ppc64el. 131s Preparing to unpack .../092-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 131s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 131s Selecting previously unselected package libwebp7:ppc64el. 131s Preparing to unpack .../093-libwebp7_1.3.2-0.4_ppc64el.deb ... 131s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 131s Selecting previously unselected package libtiff6:ppc64el. 131s Preparing to unpack .../094-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 131s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 131s Selecting previously unselected package libxft2:ppc64el. 131s Preparing to unpack .../095-libxft2_2.3.6-1_ppc64el.deb ... 131s Unpacking libxft2:ppc64el (2.3.6-1) ... 131s Selecting previously unselected package libxss1:ppc64el. 131s Preparing to unpack .../096-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 131s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 131s Selecting previously unselected package libtk8.6:ppc64el. 131s Preparing to unpack .../097-libtk8.6_8.6.13-2_ppc64el.deb ... 131s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 131s Selecting previously unselected package libxt6:ppc64el. 131s Preparing to unpack .../098-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 131s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 131s Selecting previously unselected package node-html5shiv. 131s Preparing to unpack .../099-node-html5shiv_3.7.3+dfsg-5_all.deb ... 131s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 131s Selecting previously unselected package pkgconf-bin. 131s Preparing to unpack .../100-pkgconf-bin_1.8.1-2_ppc64el.deb ... 131s Unpacking pkgconf-bin (1.8.1-2) ... 131s Selecting previously unselected package pkgconf:ppc64el. 131s Preparing to unpack .../101-pkgconf_1.8.1-2_ppc64el.deb ... 131s Unpacking pkgconf:ppc64el (1.8.1-2) ... 131s Selecting previously unselected package pkg-config:ppc64el. 131s Preparing to unpack .../102-pkg-config_1.8.1-2_ppc64el.deb ... 131s Unpacking pkg-config:ppc64el (1.8.1-2) ... 131s Selecting previously unselected package zip. 131s Preparing to unpack .../103-zip_3.0-13_ppc64el.deb ... 131s Unpacking zip (3.0-13) ... 131s Selecting previously unselected package unzip. 131s Preparing to unpack .../104-unzip_6.0-28ubuntu3_ppc64el.deb ... 131s Unpacking unzip (6.0-28ubuntu3) ... 132s Selecting previously unselected package xdg-utils. 132s Preparing to unpack .../105-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 132s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 132s Selecting previously unselected package r-base-core. 132s Preparing to unpack .../106-r-base-core_4.3.2-1build1_ppc64el.deb ... 132s Unpacking r-base-core (4.3.2-1build1) ... 132s Selecting previously unselected package liblzma-dev:ppc64el. 132s Preparing to unpack .../107-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 132s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 132s Selecting previously unselected package r-base-dev. 132s Preparing to unpack .../108-r-base-dev_4.3.2-1build1_all.deb ... 132s Unpacking r-base-dev (4.3.2-1build1) ... 132s Selecting previously unselected package pkg-r-autopkgtest. 132s Preparing to unpack .../109-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 132s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 132s Selecting previously unselected package r-bioc-biocgenerics. 132s Preparing to unpack .../110-r-bioc-biocgenerics_0.48.1-2_all.deb ... 132s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 132s Selecting previously unselected package r-bioc-biobase. 132s Preparing to unpack .../111-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 132s Unpacking r-bioc-biobase (2.62.0-1) ... 132s Selecting previously unselected package r-bioc-s4vectors. 132s Preparing to unpack .../112-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 132s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 132s Selecting previously unselected package r-bioc-iranges. 132s Preparing to unpack .../113-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 132s Unpacking r-bioc-iranges (2.36.0-1) ... 132s Selecting previously unselected package r-cran-dbi. 132s Preparing to unpack .../114-r-cran-dbi_1.2.2-1_all.deb ... 132s Unpacking r-cran-dbi (1.2.2-1) ... 132s Selecting previously unselected package r-cran-bit. 132s Preparing to unpack .../115-r-cran-bit_4.0.5-1_ppc64el.deb ... 132s Unpacking r-cran-bit (4.0.5-1) ... 132s Selecting previously unselected package r-cran-bit64. 132s Preparing to unpack .../116-r-cran-bit64_4.0.5-1_ppc64el.deb ... 132s Unpacking r-cran-bit64 (4.0.5-1) ... 132s Selecting previously unselected package r-cran-rlang. 132s Preparing to unpack .../117-r-cran-rlang_1.1.3-1_ppc64el.deb ... 132s Unpacking r-cran-rlang (1.1.3-1) ... 132s Selecting previously unselected package r-cran-cli. 132s Preparing to unpack .../118-r-cran-cli_3.6.2-1_ppc64el.deb ... 132s Unpacking r-cran-cli (3.6.2-1) ... 132s Selecting previously unselected package r-cran-glue. 132s Preparing to unpack .../119-r-cran-glue_1.7.0-1_ppc64el.deb ... 132s Unpacking r-cran-glue (1.7.0-1) ... 132s Selecting previously unselected package r-cran-lifecycle. 132s Preparing to unpack .../120-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 132s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 132s Selecting previously unselected package r-cran-vctrs. 132s Preparing to unpack .../121-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 132s Unpacking r-cran-vctrs (0.6.5-1) ... 133s Selecting previously unselected package r-cran-blob. 133s Preparing to unpack .../122-r-cran-blob_1.2.4-1_all.deb ... 133s Unpacking r-cran-blob (1.2.4-1) ... 133s Selecting previously unselected package r-cran-fastmap. 133s Preparing to unpack .../123-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 133s Unpacking r-cran-fastmap (1.1.1-1) ... 133s Selecting previously unselected package r-cran-cachem. 133s Preparing to unpack .../124-r-cran-cachem_1.0.8-1_ppc64el.deb ... 133s Unpacking r-cran-cachem (1.0.8-1) ... 133s Selecting previously unselected package r-cran-memoise. 133s Preparing to unpack .../125-r-cran-memoise_2.0.1-1_all.deb ... 133s Unpacking r-cran-memoise (2.0.1-1) ... 133s Selecting previously unselected package r-cran-pkgconfig. 133s Preparing to unpack .../126-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 133s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 133s Selecting previously unselected package r-cran-plogr. 133s Preparing to unpack .../127-r-cran-plogr_0.2.0-3build1_all.deb ... 133s Unpacking r-cran-plogr (0.2.0-3build1) ... 133s Selecting previously unselected package r-cran-cpp11. 133s Preparing to unpack .../128-r-cran-cpp11_0.4.7-1_all.deb ... 133s Unpacking r-cran-cpp11 (0.4.7-1) ... 133s Selecting previously unselected package r-cran-rsqlite. 133s Preparing to unpack .../129-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 133s Unpacking r-cran-rsqlite (2.3.4-1) ... 133s Selecting previously unselected package r-cran-curl. 133s Preparing to unpack .../130-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 133s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 133s Selecting previously unselected package r-cran-jsonlite. 133s Preparing to unpack .../131-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 133s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 133s Selecting previously unselected package r-cran-mime. 133s Preparing to unpack .../132-r-cran-mime_0.12-1_ppc64el.deb ... 133s Unpacking r-cran-mime (0.12-1) ... 133s Selecting previously unselected package r-cran-sys. 133s Preparing to unpack .../133-r-cran-sys_3.4.2-1_ppc64el.deb ... 133s Unpacking r-cran-sys (3.4.2-1) ... 133s Selecting previously unselected package r-cran-askpass. 133s Preparing to unpack .../134-r-cran-askpass_1.2.0-1_ppc64el.deb ... 133s Unpacking r-cran-askpass (1.2.0-1) ... 133s Selecting previously unselected package r-cran-openssl. 133s Preparing to unpack .../135-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 133s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 133s Selecting previously unselected package r-cran-r6. 133s Preparing to unpack .../136-r-cran-r6_2.5.1-1_all.deb ... 133s Unpacking r-cran-r6 (2.5.1-1) ... 133s Selecting previously unselected package r-cran-httr. 133s Preparing to unpack .../137-r-cran-httr_1.4.7+dfsg-1_all.deb ... 133s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 133s Selecting previously unselected package r-cran-png. 133s Preparing to unpack .../138-r-cran-png_0.1-8-1_ppc64el.deb ... 133s Unpacking r-cran-png (0.1-8-1) ... 133s Selecting previously unselected package r-bioc-zlibbioc. 133s Preparing to unpack .../139-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 133s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 133s Selecting previously unselected package r-bioc-xvector. 133s Preparing to unpack .../140-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 133s Unpacking r-bioc-xvector (0.42.0-1) ... 133s Selecting previously unselected package r-cran-bitops. 133s Preparing to unpack .../141-r-cran-bitops_1.0-7-1_ppc64el.deb ... 133s Unpacking r-cran-bitops (1.0-7-1) ... 133s Selecting previously unselected package r-cran-rcurl. 133s Preparing to unpack .../142-r-cran-rcurl_1.98-1.14+dfsg-1build1_ppc64el.deb ... 133s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 133s Selecting previously unselected package r-bioc-genomeinfodbdata. 133s Preparing to unpack .../143-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 133s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 133s Selecting previously unselected package r-bioc-genomeinfodb. 133s Preparing to unpack .../144-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 133s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 133s Selecting previously unselected package r-cran-crayon. 133s Preparing to unpack .../145-r-cran-crayon_1.5.2-1_all.deb ... 133s Unpacking r-cran-crayon (1.5.2-1) ... 133s Selecting previously unselected package r-bioc-biostrings. 133s Preparing to unpack .../146-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 133s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 133s Selecting previously unselected package r-bioc-keggrest. 133s Preparing to unpack .../147-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 133s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 133s Selecting previously unselected package r-bioc-annotationdbi. 133s Preparing to unpack .../148-r-bioc-annotationdbi_1.64.1-1_all.deb ... 133s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 133s Selecting previously unselected package r-cran-xml. 133s Preparing to unpack .../149-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 133s Unpacking r-cran-xml (3.99-0.16.1-1) ... 134s Selecting previously unselected package r-cran-xtable. 134s Preparing to unpack .../150-r-cran-xtable_1%3a1.8-4-2_all.deb ... 134s Unpacking r-cran-xtable (1:1.8-4-2) ... 134s Selecting previously unselected package r-bioc-annotate. 134s Preparing to unpack .../151-r-bioc-annotate_1.80.0+dfsg-1_all.deb ... 134s Unpacking r-bioc-annotate (1.80.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-generics. 134s Preparing to unpack .../152-r-cran-generics_0.1.3-1_all.deb ... 134s Unpacking r-cran-generics (0.1.3-1) ... 134s Selecting previously unselected package r-cran-magrittr. 134s Preparing to unpack .../153-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 134s Unpacking r-cran-magrittr (2.0.3-1) ... 134s Selecting previously unselected package r-cran-fansi. 134s Preparing to unpack .../154-r-cran-fansi_1.0.5-1_ppc64el.deb ... 134s Unpacking r-cran-fansi (1.0.5-1) ... 134s Selecting previously unselected package r-cran-utf8. 134s Preparing to unpack .../155-r-cran-utf8_1.2.4-1_ppc64el.deb ... 134s Unpacking r-cran-utf8 (1.2.4-1) ... 134s Selecting previously unselected package r-cran-pillar. 134s Preparing to unpack .../156-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 134s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-tibble. 134s Preparing to unpack .../157-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 134s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 134s Selecting previously unselected package r-cran-withr. 134s Preparing to unpack .../158-r-cran-withr_2.5.0-1_all.deb ... 134s Unpacking r-cran-withr (2.5.0-1) ... 134s Selecting previously unselected package r-cran-tidyselect. 134s Preparing to unpack .../159-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 134s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-dplyr. 134s Preparing to unpack .../160-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 134s Unpacking r-cran-dplyr (1.1.4-1) ... 134s Selecting previously unselected package r-cran-purrr. 134s Preparing to unpack .../161-r-cran-purrr_1.0.2-1_ppc64el.deb ... 134s Unpacking r-cran-purrr (1.0.2-1) ... 134s Selecting previously unselected package r-cran-stringi. 134s Preparing to unpack .../162-r-cran-stringi_1.8.3-1_ppc64el.deb ... 134s Unpacking r-cran-stringi (1.8.3-1) ... 134s Selecting previously unselected package r-cran-stringr. 134s Preparing to unpack .../163-r-cran-stringr_1.5.1-1_all.deb ... 134s Unpacking r-cran-stringr (1.5.1-1) ... 134s Selecting previously unselected package r-cran-tidyr. 134s Preparing to unpack .../164-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 134s Unpacking r-cran-tidyr (1.3.1-1) ... 134s Selecting previously unselected package r-cran-dbplyr. 134s Preparing to unpack .../165-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 134s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-filelock. 134s Preparing to unpack .../166-r-cran-filelock_1.0.3-1_ppc64el.deb ... 134s Unpacking r-cran-filelock (1.0.3-1) ... 134s Selecting previously unselected package r-bioc-biocfilecache. 134s Preparing to unpack .../167-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 134s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 134s Selecting previously unselected package r-bioc-biocio. 134s Preparing to unpack .../168-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 134s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-formatr. 134s Preparing to unpack .../169-r-cran-formatr_1.14-1_all.deb ... 134s Unpacking r-cran-formatr (1.14-1) ... 134s Selecting previously unselected package r-cran-lambda.r. 134s Preparing to unpack .../170-r-cran-lambda.r_1.2.4-2build1_all.deb ... 134s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 134s Selecting previously unselected package r-cran-futile.options. 134s Preparing to unpack .../171-r-cran-futile.options_1.0.1-3build1_all.deb ... 134s Unpacking r-cran-futile.options (1.0.1-3build1) ... 134s Selecting previously unselected package r-cran-futile.logger. 134s Preparing to unpack .../172-r-cran-futile.logger_1.4.3-4build1_all.deb ... 134s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 134s Selecting previously unselected package r-cran-snow. 134s Preparing to unpack .../173-r-cran-snow_1%3a0.4.4-2_all.deb ... 134s Unpacking r-cran-snow (1:0.4.4-2) ... 134s Selecting previously unselected package r-cran-codetools. 134s Preparing to unpack .../174-r-cran-codetools_0.2-19-1_all.deb ... 134s Unpacking r-cran-codetools (0.2-19-1) ... 134s Selecting previously unselected package r-cran-bh. 134s Preparing to unpack .../175-r-cran-bh_1.84.0-1_all.deb ... 134s Unpacking r-cran-bh (1.84.0-1) ... 134s Selecting previously unselected package r-bioc-biocparallel. 134s Preparing to unpack .../176-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 134s Unpacking r-bioc-biocparallel (1.36.0-1) ... 134s Selecting previously unselected package r-cran-hms. 134s Preparing to unpack .../177-r-cran-hms_1.1.3-1_all.deb ... 134s Unpacking r-cran-hms (1.1.3-1) ... 134s Selecting previously unselected package r-cran-prettyunits. 134s Preparing to unpack .../178-r-cran-prettyunits_1.2.0-1_all.deb ... 134s Unpacking r-cran-prettyunits (1.2.0-1) ... 134s Selecting previously unselected package r-cran-progress. 134s Preparing to unpack .../179-r-cran-progress_1.2.3-1_all.deb ... 134s Unpacking r-cran-progress (1.2.3-1) ... 135s Selecting previously unselected package r-cran-digest. 135s Preparing to unpack .../180-r-cran-digest_0.6.34-1_ppc64el.deb ... 135s Unpacking r-cran-digest (0.6.34-1) ... 135s Selecting previously unselected package r-cran-rappdirs. 135s Preparing to unpack .../181-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 135s Unpacking r-cran-rappdirs (0.3.3-1) ... 135s Selecting previously unselected package r-cran-xml2. 135s Preparing to unpack .../182-r-cran-xml2_1.3.6-1_ppc64el.deb ... 135s Unpacking r-cran-xml2 (1.3.6-1) ... 135s Selecting previously unselected package r-bioc-biomart. 135s Preparing to unpack .../183-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 135s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 135s Selecting previously unselected package r-bioc-genomicranges. 135s Preparing to unpack .../184-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 135s Selecting previously unselected package r-bioc-rhtslib. 135s Preparing to unpack .../185-r-bioc-rhtslib_2.4.1+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 135s Selecting previously unselected package r-bioc-rsamtools. 135s Preparing to unpack .../186-r-bioc-rsamtools_2.18.0+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-matrixstats. 135s Preparing to unpack .../187-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 135s Unpacking r-cran-matrixstats (1.2.0-1) ... 135s Selecting previously unselected package r-bioc-matrixgenerics. 135s Preparing to unpack .../188-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 135s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 135s Selecting previously unselected package r-cran-lattice. 135s Preparing to unpack .../189-r-cran-lattice_0.22-5-1_ppc64el.deb ... 135s Unpacking r-cran-lattice (0.22-5-1) ... 135s Selecting previously unselected package r-cran-matrix. 135s Preparing to unpack .../190-r-cran-matrix_1.6-5-1_ppc64el.deb ... 135s Unpacking r-cran-matrix (1.6-5-1) ... 135s Selecting previously unselected package r-cran-abind. 135s Preparing to unpack .../191-r-cran-abind_1.4-5-2_all.deb ... 135s Unpacking r-cran-abind (1.4-5-2) ... 135s Selecting previously unselected package r-bioc-s4arrays. 135s Preparing to unpack .../192-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 135s Selecting previously unselected package r-bioc-sparsearray. 135s Preparing to unpack .../193-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 135s Selecting previously unselected package r-bioc-delayedarray. 135s Preparing to unpack .../194-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 135s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 135s Selecting previously unselected package r-bioc-summarizedexperiment. 135s Preparing to unpack .../195-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 135s Selecting previously unselected package r-bioc-genomicalignments. 135s Preparing to unpack .../196-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 135s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 135s Selecting previously unselected package r-cran-littler. 135s Preparing to unpack .../197-r-cran-littler_0.3.19-1_ppc64el.deb ... 135s Unpacking r-cran-littler (0.3.19-1) ... 135s Selecting previously unselected package r-cran-rjson. 135s Preparing to unpack .../198-r-cran-rjson_0.2.21-1_ppc64el.deb ... 135s Unpacking r-cran-rjson (0.2.21-1) ... 135s Selecting previously unselected package r-cran-yaml. 135s Preparing to unpack .../199-r-cran-yaml_2.3.8-1_ppc64el.deb ... 135s Unpacking r-cran-yaml (2.3.8-1) ... 135s Selecting previously unselected package r-cran-restfulr. 135s Preparing to unpack .../200-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 135s Unpacking r-cran-restfulr (0.0.15-1) ... 135s Selecting previously unselected package r-bioc-rtracklayer. 135s Preparing to unpack .../201-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 135s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 135s Selecting previously unselected package r-bioc-bsgenome. 135s Preparing to unpack .../202-r-bioc-bsgenome_1.70.2-1_all.deb ... 135s Unpacking r-bioc-bsgenome (1.70.2-1) ... 135s Selecting previously unselected package r-cran-survival. 135s Preparing to unpack .../203-r-cran-survival_3.5-8-1_ppc64el.deb ... 135s Unpacking r-cran-survival (3.5-8-1) ... 136s Selecting previously unselected package r-bioc-genefilter. 136s Preparing to unpack .../204-r-bioc-genefilter_1.84.0-1_ppc64el.deb ... 136s Unpacking r-bioc-genefilter (1.84.0-1) ... 136s Selecting previously unselected package r-bioc-genomicfeatures. 136s Preparing to unpack .../205-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 136s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 136s Selecting previously unselected package r-cran-statmod. 136s Preparing to unpack .../206-r-cran-statmod_1.5.0-1_ppc64el.deb ... 136s Unpacking r-cran-statmod (1.5.0-1) ... 136s Selecting previously unselected package r-bioc-limma. 136s Preparing to unpack .../207-r-bioc-limma_3.58.1+dfsg-1_ppc64el.deb ... 136s Unpacking r-bioc-limma (3.58.1+dfsg-1) ... 136s Selecting previously unselected package r-bioc-org.hs.eg.db. 136s Preparing to unpack .../208-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 136s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 138s Selecting previously unselected package r-cran-runit. 138s Preparing to unpack .../209-r-cran-runit_0.4.32-3_all.deb ... 138s Unpacking r-cran-runit (0.4.32-3) ... 138s Selecting previously unselected package autopkgtest-satdep. 138s Preparing to unpack .../210-1-autopkgtest-satdep.deb ... 138s Unpacking autopkgtest-satdep (0) ... 138s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 138s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 138s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 138s Setting up libpaper1:ppc64el (1.1.29) ... 138s 138s Creating config file /etc/papersize with new version 138s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 138s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 138s Setting up libdatrie1:ppc64el (0.2.13-3) ... 138s Setting up libxcb-render0:ppc64el (1.15-1) ... 138s Setting up unzip (6.0-28ubuntu3) ... 138s Setting up x11-common (1:7.7+23ubuntu2) ... 139s Setting up node-html5shiv (3.7.3+dfsg-5) ... 139s Setting up libpsl5t64:ppc64el (0.21.2-1.1) ... 139s Setting up libdeflate0:ppc64el (1.19-1) ... 139s Setting up linux-libc-dev:ppc64el (6.8.0-11.11) ... 139s Setting up libxcb-shm0:ppc64el (1.15-1) ... 139s Setting up libpaper-utils (1.1.29) ... 139s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 139s Setting up libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 139s Setting up zip (3.0-13) ... 139s Setting up libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 139s Setting up libblas3:ppc64el (3.12.0-3) ... 139s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 139s Setting up libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 139s Setting up libpkgconf3:ppc64el (1.8.1-2) ... 139s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 139s Setting up libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up fonts-dejavu-mono (2.37-8) ... 139s Setting up libmpc3:ppc64el (1.3.1-1) ... 139s Setting up libatomic1:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 139s Setting up icu-devtools (74.2-1ubuntu1) ... 139s Setting up fonts-dejavu-core (2.37-8) ... 139s Setting up pkgconf-bin (1.8.1-2) ... 139s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 139s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 139s Setting up liblzma-dev:ppc64el (5.4.5-0.3) ... 139s Setting up libubsan1:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 139s Setting up libnsl-dev:ppc64el (1.3.0-3) ... 139s Setting up libcrypt-dev:ppc64el (1:4.4.36-4) ... 139s Setting up libasan8:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 139s Setting up libthai-data (0.1.29-2) ... 139s Setting up libxss1:ppc64el (1:1.2.3-1build2) ... 139s Setting up libtsan2:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 139s Setting up libisl23:ppc64el (0.26-3) ... 139s Setting up libc-dev-bin (2.39-0ubuntu2) ... 139s Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 139s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 139s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 139s Setting up libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up liblsan0:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up libblas-dev:ppc64el (3.12.0-3) ... 139s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode 139s Setting up dctrl-tools (2.24-3build2) ... 139s Setting up libitm1:ppc64el (14-20240303-1ubuntu1) ... 139s Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 139s Setting up libice6:ppc64el (2:1.0.10-1build2) ... 139s Setting up liblapack3:ppc64el (3.12.0-3) ... 139s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 139s Setting up cpp-13 (13.2.0-17ubuntu2) ... 139s Setting up libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 139s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 139s Setting up pkgconf:ppc64el (1.8.1-2) ... 139s Setting up libthai0:ppc64el (0.1.29-2) ... 139s Setting up liblapack-dev:ppc64el (3.12.0-3) ... 139s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode 139s Setting up pkg-config:ppc64el (1.8.1-2) ... 139s Setting up libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 139s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 139s Setting up cpp (4:13.2.0-7ubuntu1) ... 139s Setting up libc6-dev:ppc64el (2.39-0ubuntu2) ... 139s Setting up curl (8.5.0-2ubuntu7) ... 139s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 139s Setting up libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 139s Setting up libsm6:ppc64el (2:1.2.3-1build2) ... 139s Setting up libicu-dev:ppc64el (74.2-1ubuntu1) ... 139s Setting up libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 139s Setting up libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 139s Setting up fontconfig (2.15.0-1ubuntu1) ... 141s Regenerating fonts cache... done. 141s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 141s Setting up libxft2:ppc64el (2.3.6-1) ... 141s Setting up libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 141s Setting up libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 141s Setting up libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 141s Setting up libtk8.6:ppc64el (8.6.13-2) ... 141s Setting up libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 141s Setting up libreadline-dev:ppc64el (8.2-3) ... 141s Setting up libcairo2:ppc64el (1.18.0-1) ... 141s Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 141s Setting up gcc-13 (13.2.0-17ubuntu2) ... 141s Setting up libxt6:ppc64el (1:1.2.1-1.1) ... 141s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 141s Setting up libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 141s Setting up libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 141s Setting up libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 141s Setting up libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 141s Setting up gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 141s Setting up libpng-dev:ppc64el (1.6.43-1) ... 141s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ... 141s Setting up g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 141s Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 141s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 141s Setting up r-base-core (4.3.2-1build1) ... 141s 141s Creating config file /etc/R/Renviron with new version 141s Setting up r-cran-crayon (1.5.2-1) ... 141s Setting up r-cran-futile.options (1.0.1-3build1) ... 141s Setting up r-cran-lattice (0.22-5-1) ... 141s Setting up r-cran-formatr (1.14-1) ... 141s Setting up r-cran-xml (3.99-0.16.1-1) ... 141s Setting up r-cran-statmod (1.5.0-1) ... 141s Setting up r-cran-r6 (2.5.1-1) ... 141s Setting up r-cran-magrittr (2.0.3-1) ... 141s Setting up r-cran-rappdirs (0.3.3-1) ... 141s Setting up r-cran-filelock (1.0.3-1) ... 141s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 141s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 141s Setting up r-cran-littler (0.3.19-1) ... 142s Setting up r-cran-bh (1.84.0-1) ... 142s Setting up r-cran-curl (5.2.0+dfsg-1) ... 142s Setting up r-cran-codetools (0.2-19-1) ... 142s Setting up g++-13 (13.2.0-17ubuntu2) ... 142s Setting up r-bioc-biocgenerics (0.48.1-2) ... 142s Setting up r-cran-rlang (1.1.3-1) ... 142s Setting up r-cran-matrixstats (1.2.0-1) ... 142s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 142s Setting up r-cran-sys (3.4.2-1) ... 142s Setting up r-cran-plogr (0.2.0-3build1) ... 142s Setting up r-cran-withr (2.5.0-1) ... 142s Setting up r-cran-mime (0.12-1) ... 142s Setting up r-cran-generics (0.1.3-1) ... 142s Setting up r-cran-abind (1.4-5-2) ... 142s Setting up r-cran-digest (0.6.34-1) ... 142s Setting up r-cran-yaml (2.3.8-1) ... 142s Setting up r-cran-lambda.r (1.2.4-2build1) ... 142s Setting up r-cran-dbi (1.2.2-1) ... 142s Setting up r-cran-prettyunits (1.2.0-1) ... 142s Setting up r-cran-fansi (1.0.5-1) ... 142s Setting up r-cran-snow (1:0.4.4-2) ... 142s Setting up r-cran-glue (1.7.0-1) ... 142s Setting up r-cran-bit (4.0.5-1) ... 142s Setting up r-cran-xtable (1:1.8-4-2) ... 142s Setting up r-cran-cli (3.6.2-1) ... 142s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 142s Setting up r-cran-bitops (1.0-7-1) ... 142s Setting up r-cran-bit64 (4.0.5-1) ... 142s Setting up gcc (4:13.2.0-7ubuntu1) ... 142s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 142s Setting up r-cran-askpass (1.2.0-1) ... 142s Setting up r-cran-fastmap (1.1.1-1) ... 142s Setting up r-cran-png (0.1-8-1) ... 142s Setting up r-bioc-biobase (2.62.0-1) ... 142s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 142s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 142s Setting up r-cran-utf8 (1.2.4-1) ... 142s Setting up gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 142s Setting up r-cran-stringi (1.8.3-1) ... 142s Setting up r-cran-cpp11 (0.4.7-1) ... 142s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 142s Setting up r-cran-runit (0.4.32-3) ... 142s Setting up r-cran-futile.logger (1.4.3-4build1) ... 142s Setting up r-bioc-limma (3.58.1+dfsg-1) ... 142s Setting up r-cran-matrix (1.6-5-1) ... 142s Setting up g++ (4:13.2.0-7ubuntu1) ... 142s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 142s Setting up r-cran-cachem (1.0.8-1) ... 142s Setting up build-essential (12.10ubuntu1) ... 142s Setting up r-bioc-iranges (2.36.0-1) ... 142s Setting up r-cran-rjson (0.2.21-1) ... 142s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 142s Setting up r-cran-restfulr (0.0.15-1) ... 142s Setting up r-cran-vctrs (0.6.5-1) ... 142s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 142s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 142s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 142s Setting up r-cran-stringr (1.5.1-1) ... 142s Setting up r-bioc-biocparallel (1.36.0-1) ... 142s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 142s Setting up r-cran-xml2 (1.3.6-1) ... 142s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 142s Setting up r-cran-survival (3.5-8-1) ... 142s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 142s Setting up gfortran (4:13.2.0-7ubuntu1) ... 142s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 142s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 142s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 142s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 142s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 142s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 142s Setting up r-cran-httr (1.4.7+dfsg-1) ... 142s Setting up r-cran-hms (1.1.3-1) ... 142s Setting up r-cran-memoise (2.0.1-1) ... 142s Setting up r-cran-purrr (1.0.2-1) ... 142s Setting up r-cran-blob (1.2.4-1) ... 142s Setting up r-bioc-xvector (0.42.0-1) ... 142s Setting up r-cran-dplyr (1.1.4-1) ... 142s Setting up r-cran-rsqlite (2.3.4-1) ... 142s Setting up r-cran-progress (1.2.3-1) ... 142s Setting up r-base-dev (4.3.2-1build1) ... 142s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 142s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 142s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 142s Setting up r-cran-tidyr (1.3.1-1) ... 142s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 142s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 142s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 142s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 142s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 142s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 142s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 142s Setting up r-bioc-annotationdbi (1.64.1-1) ... 142s Setting up r-bioc-annotate (1.80.0+dfsg-1) ... 142s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 142s Setting up r-bioc-genefilter (1.84.0-1) ... 142s Setting up r-bioc-genomicalignments (1.38.2-1) ... 142s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 142s Setting up r-bioc-rtracklayer (1.62.0-1) ... 142s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 142s Setting up r-bioc-bsgenome (1.70.2-1) ... 142s Setting up autopkgtest-satdep (0) ... 142s Processing triggers for man-db (2.12.0-3) ... 143s Processing triggers for install-info (7.1-3) ... 143s Processing triggers for libc-bin (2.39-0ubuntu2) ... 149s (Reading database ... 100609 files and directories currently installed.) 149s Removing autopkgtest-satdep (0) ... 150s autopkgtest [22:34:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 150s autopkgtest [22:34:55]: test pkg-r-autopkgtest: [----------------------- 150s Test: Try to load the R library rtracklayer 150s 150s R version 4.3.2 (2023-10-31) -- "Eye Holes" 150s Copyright (C) 2023 The R Foundation for Statistical Computing 150s Platform: powerpc64le-unknown-linux-gnu (64-bit) 150s 150s R is free software and comes with ABSOLUTELY NO WARRANTY. 150s You are welcome to redistribute it under certain conditions. 150s Type 'license()' or 'licence()' for distribution details. 150s 150s R is a collaborative project with many contributors. 150s Type 'contributors()' for more information and 150s 'citation()' on how to cite R or R packages in publications. 150s 150s Type 'demo()' for some demos, 'help()' for on-line help, or 150s 'help.start()' for an HTML browser interface to help. 150s Type 'q()' to quit R. 150s 150s > library('rtracklayer') 150s Loading required package: GenomicRanges 150s Loading required package: stats4 150s Loading required package: BiocGenerics 150s 150s Attaching package: ‘BiocGenerics’ 150s 150s The following objects are masked from ‘package:stats’: 150s 150s IQR, mad, sd, var, xtabs 150s 150s The following objects are masked from ‘package:base’: 150s 150s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 150s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 150s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 150s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 150s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 150s table, tapply, union, unique, unsplit, which.max, which.min 150s 150s Loading required package: S4Vectors 151s 151s Attaching package: ‘S4Vectors’ 151s 151s The following object is masked from ‘package:utils’: 151s 151s findMatches 151s 151s The following objects are masked from ‘package:base’: 151s 151s expand.grid, I, unname 151s 151s Loading required package: IRanges 152s Loading required package: GenomeInfoDb 158s > 158s > 158s Other tests are currently unsupported! 158s They will be progressively added. 159s autopkgtest [22:35:04]: test pkg-r-autopkgtest: -----------------------] 159s autopkgtest [22:35:04]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 159s pkg-r-autopkgtest PASS 160s autopkgtest [22:35:05]: @@@@@@@@@@@@@@@@@@@@ summary 160s pkg-r-autopkgtest PASS 170s Creating nova instance adt-noble-ppc64el-r-bioc-rtracklayer-20240317-223224-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...