0s autopkgtest [21:46:43]: starting date and time: 2024-03-17 21:46:43+0000 0s autopkgtest [21:46:43]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:46:43]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vbhhjyph/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rsamtools,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-rtracklayer --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-2.secgroup --name adt-noble-ppc64el-r-bioc-rtracklayer-20240317-214643-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 77s autopkgtest [21:48:00]: testbed dpkg architecture: ppc64el 77s autopkgtest [21:48:00]: testbed apt version: 2.7.12 77s autopkgtest [21:48:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 78s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [484 kB] 79s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3676 kB] 79s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 79s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 79s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 79s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 79s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 79s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 79s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3974 kB] 79s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 79s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 79s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 82s Fetched 9012 kB in 2s (3884 kB/s) 83s Reading package lists... 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Calculating upgrade... 85s The following packages will be REMOVED: 85s libssl3 85s The following NEW packages will be installed: 85s libssl3t64 85s The following packages have been kept back: 85s curl 85s The following packages will be upgraded: 85s openssl 85s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 85s Need to get 3195 kB of archives. 85s After this operation, 6144 B of additional disk space will be used. 85s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 86s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 86s Fetched 3195 kB in 1s (4049 kB/s) 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 87s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 87s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 87s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 87s wget depends on libssl3 (>= 3.0.0). 87s tnftp depends on libssl3 (>= 3.0.0). 87s tcpdump depends on libssl3 (>= 3.0.0). 87s systemd-resolved depends on libssl3 (>= 3.0.0). 87s systemd depends on libssl3 (>= 3.0.0). 87s sudo depends on libssl3 (>= 3.0.0). 87s rsync depends on libssl3 (>= 3.0.0). 87s python3-cryptography depends on libssl3 (>= 3.0.0). 87s openssh-server depends on libssl3 (>= 3.0.10). 87s openssh-client depends on libssl3 (>= 3.0.10). 87s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 87s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 87s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 87s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 87s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 87s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 87s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 87s libnvme1 depends on libssl3 (>= 3.0.0). 87s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 87s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 87s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 87s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 87s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 87s kmod depends on libssl3 (>= 3.0.0). 87s dhcpcd-base depends on libssl3 (>= 3.0.0). 87s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 87s 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 87s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 87s Selecting previously unselected package libssl3t64:ppc64el. 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 87s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 87s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 87s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 87s Setting up openssl (3.0.13-0ubuntu1) ... 87s Processing triggers for man-db (2.12.0-3) ... 88s Processing triggers for libc-bin (2.39-0ubuntu2) ... 88s Reading package lists... 88s Building dependency tree... 88s Reading state information... 88s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 88s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 89s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 89s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 89s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 90s Reading package lists... 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Calculating upgrade... 90s The following packages have been kept back: 90s curl 90s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 91s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 93s autopkgtest [21:48:16]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 93s autopkgtest [21:48:16]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rtracklayer 96s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rtracklayer 1.62.0-1 (dsc) [2398 B] 96s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rtracklayer 1.62.0-1 (tar) [4019 kB] 96s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rtracklayer 1.62.0-1 (diff) [27.2 kB] 96s gpgv: Signature made Thu Nov 30 17:25:54 2023 UTC 96s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 96s gpgv: issuer "tillea@rki.de" 96s gpgv: Can't check signature: No public key 96s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rtracklayer_1.62.0-1.dsc: no acceptable signature found 96s autopkgtest [21:48:19]: testing package r-bioc-rtracklayer version 1.62.0-1 97s autopkgtest [21:48:20]: build not needed 98s autopkgtest [21:48:21]: test pkg-r-autopkgtest: preparing testbed 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 100s Starting pkgProblemResolver with broken count: 0 100s Starting 2 pkgProblemResolver with broken count: 0 100s Done 100s The following additional packages will be installed: 100s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 100s cpp-powerpc64le-linux-gnu curl dctrl-tools fontconfig fontconfig-config 100s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-powerpc64le-linux-gnu 100s g++-powerpc64le-linux-gnu gcc gcc-13 gcc-13-powerpc64le-linux-gnu 100s gcc-powerpc64le-linux-gnu gfortran gfortran-13 100s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 100s icu-devtools libasan8 libatomic1 libblas-dev libblas3 libboost-dev 100s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 100s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 100s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 100s libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 100s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery liblapack-dev 100s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 100s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 100s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 100s libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 libquadmath0 libreadline-dev 100s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 100s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 100s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev node-html5shiv 100s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 100s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 100s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biomart 100s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-genefilter 100s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 100s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 100s r-bioc-limma r-bioc-matrixgenerics r-bioc-org.hs.eg.db r-bioc-rhtslib 100s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 100s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-xvector 100s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-bh r-cran-bit 100s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem r-cran-cli 100s r-cran-codetools r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 100s r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-fansi r-cran-fastmap 100s r-cran-filelock r-cran-formatr r-cran-futile.logger r-cran-futile.options 100s r-cran-generics r-cran-glue r-cran-hms r-cran-httr r-cran-jsonlite 100s r-cran-lambda.r r-cran-lattice r-cran-lifecycle r-cran-littler 100s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 100s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-plogr r-cran-png 100s r-cran-prettyunits r-cran-progress r-cran-purrr r-cran-r6 r-cran-rappdirs 100s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rsqlite 100s r-cran-runit r-cran-snow r-cran-statmod r-cran-stringi r-cran-stringr 100s r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 100s r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xml r-cran-xml2 r-cran-xtable 100s r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 100s Suggested packages: 100s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 100s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 100s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 100s liblapack-doc libboost-doc libboost1.83-doc libboost-atomic1.83-dev 100s libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev 100s libboost-contract1.83-dev libboost-coroutine1.83-dev 100s libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev 100s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 100s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 100s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 100s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 100s libboost-numpy1.83-dev libboost-program-options1.83-dev 100s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 100s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 100s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 100s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 100s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 100s glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 100s tcl8.6 tk8.6 nodejs elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 100s texlive-base texlive-latex-base texlive-plain-generic 100s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 100s texlive-latex-recommended texlive-latex-extra texinfo r-bioc-go.db 100s r-bioc-graph r-bioc-biocstyle r-cran-knitr r-bioc-all r-cran-testthat 100s r-cran-rmarkdown r-bioc-affy r-bioc-deseq2 r-cran-foreach r-cran-bbmisc 100s r-cran-doparallel r-bioc-variantannotation r-bioc-shortread 100s r-cran-batchtools r-cran-data.table r-cran-mockery r-cran-webmockr 100s r-cran-biocmanager r-bioc-hdf5array r-cran-lobstr r-bioc-delayedmatrixstats 100s r-cran-class r-cran-rcolorbrewer r-cran-r.utils r-bioc-edger 100s r-bioc-ensembldb r-bioc-annotationfilter r-cran-markdown r-bioc-gviz 100s r-bioc-annotationhub r-bioc-dexseq r-cran-biasedurn r-cran-ellipse 100s r-cran-gplots r-cran-locfit r-cran-mass r-bioc-sparsematrixstats 100s r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-rstudioapi 100s r-cran-rmysql r-cran-shiny r-cran-lubridate r-cran-getopt r-cran-formattable 100s r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins r-cran-scales 100s r-cran-units r-cran-vdiffr r-cran-rcpp r-cran-rmpi r-cran-rlecuyer 100s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-evaluate 100s r-cran-here r-cran-htmltools r-cran-pkgbuild r-cran-pkgload r-cran-plm 100s r-cran-zoo 100s Recommended packages: 100s bzip2-doc manpages manpages-dev libc-devtools javascript-common libpng-tools 100s r-recommended r-doc-html r-cran-testthat r-cran-callr r-cran-covr 100s r-cran-htmltools r-cran-htmlwidgets r-cran-knitr r-cran-mockery 100s r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-rprojroot 100s r-cran-rstudioapi r-cran-whoami r-cran-bench r-cran-brio r-cran-decor 100s r-cran-desc r-cran-ggplot2 r-cran-lobstr r-cran-scales r-cran-rcpp 100s r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils 100s r-cran-rpostgresql r-cran-broom r-cran-rmysql r-cran-unitizer r-cran-testit 100s r-cran-pkgload r-cran-waldo r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf 100s r-cran-lintr r-cran-tidyverse r-cran-base64enc r-cran-markdown 100s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-fs r-cran-usethis 100s r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest r-cran-data.table 100s r-cran-mockr r-cran-formattable r-cran-pkgdown r-cran-zeallot 100s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 100s x11-xserver-utils 100s The following packages will be REMOVED: 100s libcurl4 libpsl5 100s The following NEW packages will be installed: 100s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 100s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 100s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-powerpc64le-linux-gnu 100s g++-powerpc64le-linux-gnu gcc gcc-13 gcc-13-powerpc64le-linux-gnu 100s gcc-powerpc64le-linux-gnu gfortran gfortran-13 100s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 100s icu-devtools libasan8 libatomic1 libblas-dev libblas3 libboost-dev 100s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 100s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 100s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 100s libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 100s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery liblapack-dev 100s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 100s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 100s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 100s libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 libquadmath0 libreadline-dev 100s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 100s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 100s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev node-html5shiv 100s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 100s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 100s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biomart 100s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-genefilter 100s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 100s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 100s r-bioc-limma r-bioc-matrixgenerics r-bioc-org.hs.eg.db r-bioc-rhtslib 100s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 100s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-xvector 100s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-bh r-cran-bit 100s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem r-cran-cli 100s r-cran-codetools r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 100s r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-fansi r-cran-fastmap 100s r-cran-filelock r-cran-formatr r-cran-futile.logger r-cran-futile.options 100s r-cran-generics r-cran-glue r-cran-hms r-cran-httr r-cran-jsonlite 100s r-cran-lambda.r r-cran-lattice r-cran-lifecycle r-cran-littler 100s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 100s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-plogr r-cran-png 100s r-cran-prettyunits r-cran-progress r-cran-purrr r-cran-r6 r-cran-rappdirs 100s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rsqlite 100s r-cran-runit r-cran-snow r-cran-statmod r-cran-stringi r-cran-stringr 100s r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 100s r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xml r-cran-xml2 r-cran-xtable 100s r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 100s The following packages will be upgraded: 100s curl 100s 1 upgraded, 212 newly installed, 2 to remove and 0 not upgraded. 100s Need to get 332 MB/332 MB of archives. 100s After this operation, 1194 MB of additional disk space will be used. 100s Get:1 /tmp/autopkgtest.XIpkUA/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [792 B] 100s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1 [59.0 kB] 100s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu7 [234 kB] 101s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu7 [428 kB] 101s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 101s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 101s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 101s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 101s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 101s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 101s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 102s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 102s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 102s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 103s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 103s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 103s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 103s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 103s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 103s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 103s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 103s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 103s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 103s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 103s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 103s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 103s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 103s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 104s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 104s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 104s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 104s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 104s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 104s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 104s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 104s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 104s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 104s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 104s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 104s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 104s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 104s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 105s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 105s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 105s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 105s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 105s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 105s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 105s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 105s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 105s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 105s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 105s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 105s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 105s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 105s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 105s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 105s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 105s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 105s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 105s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 105s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 105s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 105s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 105s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 105s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 105s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 106s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 106s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 106s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 106s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 106s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 106s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 106s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 106s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 106s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 106s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 106s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 106s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 106s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 106s Get:81 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 106s Get:82 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 106s Get:83 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 106s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 106s Get:85 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 106s Get:86 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 106s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 106s Get:88 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 106s Get:89 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 106s Get:90 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 106s Get:91 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 106s Get:92 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 106s Get:93 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 106s Get:94 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 106s Get:95 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 106s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 106s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 106s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 106s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 106s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 106s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 106s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 106s Get:103 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 106s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 107s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 107s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 107s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 107s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 107s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 107s Get:110 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 111s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 111s Get:112 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 111s Get:113 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 111s Get:114 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 111s Get:115 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 111s Get:116 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 111s Get:117 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 112s Get:118 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 112s Get:119 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 112s Get:120 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 112s Get:121 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 112s Get:122 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 113s Get:123 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 113s Get:124 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 113s Get:125 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 113s Get:126 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 113s Get:127 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 113s Get:128 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 113s Get:129 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 113s Get:130 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 113s Get:131 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 113s Get:132 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 113s Get:133 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 113s Get:134 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 113s Get:135 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 113s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 113s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 113s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 113s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 113s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 113s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 113s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 113s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 113s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 114s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 114s Get:146 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 114s Get:147 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 116s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 116s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 116s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 118s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 118s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 119s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 119s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 119s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotate all 1.80.0+dfsg-1 [1730 kB] 120s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 120s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 120s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 120s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 120s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 120s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 120s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 120s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 120s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 120s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 120s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 120s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 120s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 121s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 121s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 121s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 121s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 121s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 121s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 121s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 121s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 121s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 121s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 121s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 121s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 121s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 121s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 121s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 121s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 121s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 121s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 121s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 121s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 122s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-1 [1548 kB] 122s Get:190 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1build1 [3815 kB] 122s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 122s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 122s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 123s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 123s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 123s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 123s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 123s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 124s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 124s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 124s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 124s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 124s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 124s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 125s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 125s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-bsgenome all 1.70.2-1 [6975 kB] 126s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-survival ppc64el 3.5-8-1 [6160 kB] 126s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genefilter ppc64el 1.84.0-1 [1127 kB] 126s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 126s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-statmod ppc64el 1.5.0-1 [298 kB] 126s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-limma ppc64el 3.58.1+dfsg-1 [1900 kB] 126s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 129s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 129s Preconfiguring packages ... 129s Fetched 332 MB in 28s (11.7 MB/s) 129s dpkg: libpsl5:ppc64el: dependency problems, but removing anyway as you requested: 129s wget depends on libpsl5 (>= 0.16.0). 129s libcurl4:ppc64el depends on libpsl5 (>= 0.16.0). 129s libcurl3-gnutls:ppc64el depends on libpsl5 (>= 0.16.0). 129s 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 129s Removing libpsl5:ppc64el (0.21.2-1build1) ... 129s Selecting previously unselected package libpsl5t64:ppc64el. 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70092 files and directories currently installed.) 129s Preparing to unpack .../libpsl5t64_0.21.2-1.1_ppc64el.deb ... 129s Unpacking libpsl5t64:ppc64el (0.21.2-1.1) ... 129s Preparing to unpack .../curl_8.5.0-2ubuntu7_ppc64el.deb ... 129s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70098 files and directories currently installed.) 129s Removing libcurl4:ppc64el (8.5.0-2ubuntu2) ... 129s Selecting previously unselected package libcurl4t64:ppc64el. 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70093 files and directories currently installed.) 129s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_ppc64el.deb ... 129s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 129s Selecting previously unselected package libc-dev-bin. 129s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 129s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 129s Selecting previously unselected package linux-libc-dev:ppc64el. 129s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 129s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 130s Selecting previously unselected package libcrypt-dev:ppc64el. 130s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 130s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 130s Selecting previously unselected package libtirpc-dev:ppc64el. 130s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 130s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 130s Selecting previously unselected package libnsl-dev:ppc64el. 130s Preparing to unpack .../005-libnsl-dev_1.3.0-3_ppc64el.deb ... 130s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 130s Selecting previously unselected package rpcsvc-proto. 130s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 130s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 130s Selecting previously unselected package libc6-dev:ppc64el. 130s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 130s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 130s Selecting previously unselected package libisl23:ppc64el. 130s Preparing to unpack .../008-libisl23_0.26-3_ppc64el.deb ... 130s Unpacking libisl23:ppc64el (0.26-3) ... 130s Selecting previously unselected package libmpc3:ppc64el. 130s Preparing to unpack .../009-libmpc3_1.3.1-1_ppc64el.deb ... 130s Unpacking libmpc3:ppc64el (1.3.1-1) ... 130s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 130s Preparing to unpack .../010-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 130s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 130s Selecting previously unselected package cpp-13. 130s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 130s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 130s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 130s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 130s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 130s Selecting previously unselected package cpp. 130s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 130s Unpacking cpp (4:13.2.0-7ubuntu1) ... 130s Selecting previously unselected package libcc1-0:ppc64el. 130s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libgomp1:ppc64el. 130s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libitm1:ppc64el. 130s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libatomic1:ppc64el. 130s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libasan8:ppc64el. 130s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package liblsan0:ppc64el. 130s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libtsan2:ppc64el. 130s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libubsan1:ppc64el. 130s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libquadmath0:ppc64el. 130s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 130s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 130s Selecting previously unselected package libgcc-13-dev:ppc64el. 130s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 130s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 131s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 131s Preparing to unpack .../024-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 131s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 131s Selecting previously unselected package gcc-13. 131s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 131s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 131s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 131s Preparing to unpack .../026-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 131s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 131s Selecting previously unselected package gcc. 131s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 131s Unpacking gcc (4:13.2.0-7ubuntu1) ... 131s Selecting previously unselected package libstdc++-13-dev:ppc64el. 131s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 131s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 131s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 131s Preparing to unpack .../029-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 131s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package g++-13. 132s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 132s Unpacking g++-13 (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package g++-powerpc64le-linux-gnu. 132s Preparing to unpack .../031-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 132s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package g++. 132s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 132s Unpacking g++ (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package build-essential. 132s Preparing to unpack .../033-build-essential_12.10ubuntu1_ppc64el.deb ... 132s Unpacking build-essential (12.10ubuntu1) ... 132s Selecting previously unselected package dctrl-tools. 132s Preparing to unpack .../034-dctrl-tools_2.24-3build2_ppc64el.deb ... 132s Unpacking dctrl-tools (2.24-3build2) ... 132s Selecting previously unselected package fonts-dejavu-mono. 132s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 132s Unpacking fonts-dejavu-mono (2.37-8) ... 132s Selecting previously unselected package fonts-dejavu-core. 132s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 132s Unpacking fonts-dejavu-core (2.37-8) ... 132s Selecting previously unselected package fontconfig-config. 132s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 132s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 132s Selecting previously unselected package libfontconfig1:ppc64el. 132s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 132s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 132s Selecting previously unselected package fontconfig. 132s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 132s Unpacking fontconfig (2.15.0-1ubuntu1) ... 132s Selecting previously unselected package libgfortran5:ppc64el. 132s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 132s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libgfortran-13-dev:ppc64el. 132s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 132s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 132s Preparing to unpack .../042-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 132s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gfortran-13. 132s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 132s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 132s Preparing to unpack .../044-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 132s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package gfortran. 132s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 132s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package icu-devtools. 132s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 132s Unpacking icu-devtools (74.2-1ubuntu1) ... 132s Selecting previously unselected package libblas3:ppc64el. 132s Preparing to unpack .../047-libblas3_3.12.0-3_ppc64el.deb ... 132s Unpacking libblas3:ppc64el (3.12.0-3) ... 132s Selecting previously unselected package libblas-dev:ppc64el. 132s Preparing to unpack .../048-libblas-dev_3.12.0-3_ppc64el.deb ... 132s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 132s Selecting previously unselected package libboost1.83-dev:ppc64el. 132s Preparing to unpack .../049-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 132s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 136s Selecting previously unselected package libboost-dev:ppc64el. 136s Preparing to unpack .../050-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 136s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 136s Selecting previously unselected package libbz2-dev:ppc64el. 136s Preparing to unpack .../051-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 136s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 136s Selecting previously unselected package libpixman-1-0:ppc64el. 136s Preparing to unpack .../052-libpixman-1-0_0.42.2-1_ppc64el.deb ... 136s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 136s Selecting previously unselected package libxcb-render0:ppc64el. 136s Preparing to unpack .../053-libxcb-render0_1.15-1_ppc64el.deb ... 136s Unpacking libxcb-render0:ppc64el (1.15-1) ... 136s Selecting previously unselected package libxcb-shm0:ppc64el. 136s Preparing to unpack .../054-libxcb-shm0_1.15-1_ppc64el.deb ... 136s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 136s Selecting previously unselected package libxrender1:ppc64el. 136s Preparing to unpack .../055-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 136s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 136s Selecting previously unselected package libcairo2:ppc64el. 136s Preparing to unpack .../056-libcairo2_1.18.0-1_ppc64el.deb ... 136s Unpacking libcairo2:ppc64el (1.18.0-1) ... 136s Selecting previously unselected package libdatrie1:ppc64el. 136s Preparing to unpack .../057-libdatrie1_0.2.13-3_ppc64el.deb ... 136s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 136s Selecting previously unselected package libdeflate0:ppc64el. 136s Preparing to unpack .../058-libdeflate0_1.19-1_ppc64el.deb ... 136s Unpacking libdeflate0:ppc64el (1.19-1) ... 136s Selecting previously unselected package libgraphite2-3:ppc64el. 136s Preparing to unpack .../059-libgraphite2-3_1.3.14-2_ppc64el.deb ... 136s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 136s Selecting previously unselected package libharfbuzz0b:ppc64el. 136s Preparing to unpack .../060-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 136s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 136s Selecting previously unselected package x11-common. 136s Preparing to unpack .../061-x11-common_1%3a7.7+23ubuntu2_all.deb ... 136s Unpacking x11-common (1:7.7+23ubuntu2) ... 136s Selecting previously unselected package libice6:ppc64el. 136s Preparing to unpack .../062-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 136s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 136s Selecting previously unselected package libicu-dev:ppc64el. 136s Preparing to unpack .../063-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 136s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 136s Selecting previously unselected package libjpeg-turbo8:ppc64el. 136s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 136s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 136s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 136s Preparing to unpack .../065-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 136s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 136s Selecting previously unselected package libjpeg8:ppc64el. 136s Preparing to unpack .../066-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 136s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 136s Selecting previously unselected package libjpeg8-dev:ppc64el. 136s Preparing to unpack .../067-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 136s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 136s Selecting previously unselected package libjpeg-dev:ppc64el. 136s Preparing to unpack .../068-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 136s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 136s Selecting previously unselected package libjs-jquery. 136s Preparing to unpack .../069-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 136s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 136s Selecting previously unselected package liblapack3:ppc64el. 136s Preparing to unpack .../070-liblapack3_3.12.0-3_ppc64el.deb ... 136s Unpacking liblapack3:ppc64el (3.12.0-3) ... 136s Selecting previously unselected package liblapack-dev:ppc64el. 136s Preparing to unpack .../071-liblapack-dev_3.12.0-3_ppc64el.deb ... 136s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 137s Selecting previously unselected package liblerc4:ppc64el. 137s Preparing to unpack .../072-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 137s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 137s Selecting previously unselected package libncurses-dev:ppc64el. 137s Preparing to unpack .../073-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 137s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 137s Selecting previously unselected package libthai-data. 137s Preparing to unpack .../074-libthai-data_0.1.29-2_all.deb ... 137s Unpacking libthai-data (0.1.29-2) ... 137s Selecting previously unselected package libthai0:ppc64el. 137s Preparing to unpack .../075-libthai0_0.1.29-2_ppc64el.deb ... 137s Unpacking libthai0:ppc64el (0.1.29-2) ... 137s Selecting previously unselected package libpango-1.0-0:ppc64el. 137s Preparing to unpack .../076-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 137s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 137s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 137s Preparing to unpack .../077-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 137s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 137s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 137s Preparing to unpack .../078-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 137s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 137s Selecting previously unselected package libpaper1:ppc64el. 137s Preparing to unpack .../079-libpaper1_1.1.29_ppc64el.deb ... 137s Unpacking libpaper1:ppc64el (1.1.29) ... 137s Selecting previously unselected package libpaper-utils. 137s Preparing to unpack .../080-libpaper-utils_1.1.29_ppc64el.deb ... 137s Unpacking libpaper-utils (1.1.29) ... 137s Selecting previously unselected package libpcre2-16-0:ppc64el. 137s Preparing to unpack .../081-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 137s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 137s Selecting previously unselected package libpcre2-32-0:ppc64el. 137s Preparing to unpack .../082-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 137s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 137s Selecting previously unselected package libpcre2-posix3:ppc64el. 137s Preparing to unpack .../083-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 137s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 137s Selecting previously unselected package libpcre2-dev:ppc64el. 137s Preparing to unpack .../084-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 137s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 137s Selecting previously unselected package libpkgconf3:ppc64el. 137s Preparing to unpack .../085-libpkgconf3_1.8.1-2_ppc64el.deb ... 137s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 137s Selecting previously unselected package zlib1g-dev:ppc64el. 137s Preparing to unpack .../086-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 137s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 137s Selecting previously unselected package libpng-dev:ppc64el. 137s Preparing to unpack .../087-libpng-dev_1.6.43-1_ppc64el.deb ... 137s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 137s Selecting previously unselected package libreadline-dev:ppc64el. 137s Preparing to unpack .../088-libreadline-dev_8.2-3_ppc64el.deb ... 137s Unpacking libreadline-dev:ppc64el (8.2-3) ... 137s Selecting previously unselected package libsharpyuv0:ppc64el. 137s Preparing to unpack .../089-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 137s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 137s Selecting previously unselected package libsm6:ppc64el. 137s Preparing to unpack .../090-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 137s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 137s Selecting previously unselected package libtcl8.6:ppc64el. 137s Preparing to unpack .../091-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 137s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 137s Selecting previously unselected package libjbig0:ppc64el. 137s Preparing to unpack .../092-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 137s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 137s Selecting previously unselected package libwebp7:ppc64el. 137s Preparing to unpack .../093-libwebp7_1.3.2-0.4_ppc64el.deb ... 137s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 137s Selecting previously unselected package libtiff6:ppc64el. 137s Preparing to unpack .../094-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 137s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 137s Selecting previously unselected package libxft2:ppc64el. 137s Preparing to unpack .../095-libxft2_2.3.6-1_ppc64el.deb ... 137s Unpacking libxft2:ppc64el (2.3.6-1) ... 137s Selecting previously unselected package libxss1:ppc64el. 137s Preparing to unpack .../096-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 137s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 137s Selecting previously unselected package libtk8.6:ppc64el. 137s Preparing to unpack .../097-libtk8.6_8.6.13-2_ppc64el.deb ... 137s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 137s Selecting previously unselected package libxt6:ppc64el. 137s Preparing to unpack .../098-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 137s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 137s Selecting previously unselected package node-html5shiv. 137s Preparing to unpack .../099-node-html5shiv_3.7.3+dfsg-5_all.deb ... 137s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 137s Selecting previously unselected package pkgconf-bin. 137s Preparing to unpack .../100-pkgconf-bin_1.8.1-2_ppc64el.deb ... 137s Unpacking pkgconf-bin (1.8.1-2) ... 137s Selecting previously unselected package pkgconf:ppc64el. 137s Preparing to unpack .../101-pkgconf_1.8.1-2_ppc64el.deb ... 137s Unpacking pkgconf:ppc64el (1.8.1-2) ... 137s Selecting previously unselected package pkg-config:ppc64el. 137s Preparing to unpack .../102-pkg-config_1.8.1-2_ppc64el.deb ... 137s Unpacking pkg-config:ppc64el (1.8.1-2) ... 137s Selecting previously unselected package zip. 137s Preparing to unpack .../103-zip_3.0-13_ppc64el.deb ... 137s Unpacking zip (3.0-13) ... 138s Selecting previously unselected package unzip. 138s Preparing to unpack .../104-unzip_6.0-28ubuntu3_ppc64el.deb ... 138s Unpacking unzip (6.0-28ubuntu3) ... 138s Selecting previously unselected package xdg-utils. 138s Preparing to unpack .../105-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 138s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 138s Selecting previously unselected package r-base-core. 138s Preparing to unpack .../106-r-base-core_4.3.2-1build1_ppc64el.deb ... 138s Unpacking r-base-core (4.3.2-1build1) ... 138s Selecting previously unselected package liblzma-dev:ppc64el. 138s Preparing to unpack .../107-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 138s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 138s Selecting previously unselected package r-base-dev. 138s Preparing to unpack .../108-r-base-dev_4.3.2-1build1_all.deb ... 138s Unpacking r-base-dev (4.3.2-1build1) ... 138s Selecting previously unselected package pkg-r-autopkgtest. 138s Preparing to unpack .../109-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 138s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 138s Selecting previously unselected package r-bioc-biocgenerics. 138s Preparing to unpack .../110-r-bioc-biocgenerics_0.48.1-2_all.deb ... 138s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 138s Selecting previously unselected package r-bioc-biobase. 138s Preparing to unpack .../111-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 138s Unpacking r-bioc-biobase (2.62.0-1) ... 138s Selecting previously unselected package r-bioc-s4vectors. 138s Preparing to unpack .../112-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 138s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 138s Selecting previously unselected package r-bioc-iranges. 138s Preparing to unpack .../113-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 138s Unpacking r-bioc-iranges (2.36.0-1) ... 138s Selecting previously unselected package r-cran-dbi. 138s Preparing to unpack .../114-r-cran-dbi_1.2.2-1_all.deb ... 138s Unpacking r-cran-dbi (1.2.2-1) ... 138s Selecting previously unselected package r-cran-bit. 138s Preparing to unpack .../115-r-cran-bit_4.0.5-1_ppc64el.deb ... 138s Unpacking r-cran-bit (4.0.5-1) ... 138s Selecting previously unselected package r-cran-bit64. 138s Preparing to unpack .../116-r-cran-bit64_4.0.5-1_ppc64el.deb ... 138s Unpacking r-cran-bit64 (4.0.5-1) ... 138s Selecting previously unselected package r-cran-rlang. 138s Preparing to unpack .../117-r-cran-rlang_1.1.3-1_ppc64el.deb ... 138s Unpacking r-cran-rlang (1.1.3-1) ... 138s Selecting previously unselected package r-cran-cli. 138s Preparing to unpack .../118-r-cran-cli_3.6.2-1_ppc64el.deb ... 138s Unpacking r-cran-cli (3.6.2-1) ... 139s Selecting previously unselected package r-cran-glue. 139s Preparing to unpack .../119-r-cran-glue_1.7.0-1_ppc64el.deb ... 139s Unpacking r-cran-glue (1.7.0-1) ... 139s Selecting previously unselected package r-cran-lifecycle. 139s Preparing to unpack .../120-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 139s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 139s Selecting previously unselected package r-cran-vctrs. 139s Preparing to unpack .../121-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 139s Unpacking r-cran-vctrs (0.6.5-1) ... 139s Selecting previously unselected package r-cran-blob. 139s Preparing to unpack .../122-r-cran-blob_1.2.4-1_all.deb ... 139s Unpacking r-cran-blob (1.2.4-1) ... 139s Selecting previously unselected package r-cran-fastmap. 139s Preparing to unpack .../123-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 139s Unpacking r-cran-fastmap (1.1.1-1) ... 139s Selecting previously unselected package r-cran-cachem. 139s Preparing to unpack .../124-r-cran-cachem_1.0.8-1_ppc64el.deb ... 139s Unpacking r-cran-cachem (1.0.8-1) ... 139s Selecting previously unselected package r-cran-memoise. 139s Preparing to unpack .../125-r-cran-memoise_2.0.1-1_all.deb ... 139s Unpacking r-cran-memoise (2.0.1-1) ... 139s Selecting previously unselected package r-cran-pkgconfig. 139s Preparing to unpack .../126-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 139s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 139s Selecting previously unselected package r-cran-plogr. 139s Preparing to unpack .../127-r-cran-plogr_0.2.0-3build1_all.deb ... 139s Unpacking r-cran-plogr (0.2.0-3build1) ... 139s Selecting previously unselected package r-cran-cpp11. 139s Preparing to unpack .../128-r-cran-cpp11_0.4.7-1_all.deb ... 139s Unpacking r-cran-cpp11 (0.4.7-1) ... 139s Selecting previously unselected package r-cran-rsqlite. 139s Preparing to unpack .../129-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 139s Unpacking r-cran-rsqlite (2.3.4-1) ... 139s Selecting previously unselected package r-cran-curl. 139s Preparing to unpack .../130-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 139s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 139s Selecting previously unselected package r-cran-jsonlite. 139s Preparing to unpack .../131-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 139s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 139s Selecting previously unselected package r-cran-mime. 139s Preparing to unpack .../132-r-cran-mime_0.12-1_ppc64el.deb ... 139s Unpacking r-cran-mime (0.12-1) ... 139s Selecting previously unselected package r-cran-sys. 139s Preparing to unpack .../133-r-cran-sys_3.4.2-1_ppc64el.deb ... 139s Unpacking r-cran-sys (3.4.2-1) ... 139s Selecting previously unselected package r-cran-askpass. 139s Preparing to unpack .../134-r-cran-askpass_1.2.0-1_ppc64el.deb ... 139s Unpacking r-cran-askpass (1.2.0-1) ... 139s Selecting previously unselected package r-cran-openssl. 139s Preparing to unpack .../135-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 139s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 139s Selecting previously unselected package r-cran-r6. 139s Preparing to unpack .../136-r-cran-r6_2.5.1-1_all.deb ... 139s Unpacking r-cran-r6 (2.5.1-1) ... 139s Selecting previously unselected package r-cran-httr. 139s Preparing to unpack .../137-r-cran-httr_1.4.7+dfsg-1_all.deb ... 139s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 139s Selecting previously unselected package r-cran-png. 139s Preparing to unpack .../138-r-cran-png_0.1-8-1_ppc64el.deb ... 139s Unpacking r-cran-png (0.1-8-1) ... 139s Selecting previously unselected package r-bioc-zlibbioc. 139s Preparing to unpack .../139-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 139s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 139s Selecting previously unselected package r-bioc-xvector. 139s Preparing to unpack .../140-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 139s Unpacking r-bioc-xvector (0.42.0-1) ... 139s Selecting previously unselected package r-cran-bitops. 139s Preparing to unpack .../141-r-cran-bitops_1.0-7-1_ppc64el.deb ... 139s Unpacking r-cran-bitops (1.0-7-1) ... 139s Selecting previously unselected package r-cran-rcurl. 139s Preparing to unpack .../142-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 139s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 139s Selecting previously unselected package r-bioc-genomeinfodbdata. 139s Preparing to unpack .../143-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 139s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 139s Selecting previously unselected package r-bioc-genomeinfodb. 139s Preparing to unpack .../144-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 139s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 140s Selecting previously unselected package r-cran-crayon. 140s Preparing to unpack .../145-r-cran-crayon_1.5.2-1_all.deb ... 140s Unpacking r-cran-crayon (1.5.2-1) ... 140s Selecting previously unselected package r-bioc-biostrings. 140s Preparing to unpack .../146-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 140s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 140s Selecting previously unselected package r-bioc-keggrest. 140s Preparing to unpack .../147-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 140s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 140s Selecting previously unselected package r-bioc-annotationdbi. 140s Preparing to unpack .../148-r-bioc-annotationdbi_1.64.1-1_all.deb ... 140s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 140s Selecting previously unselected package r-cran-xml. 140s Preparing to unpack .../149-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 140s Unpacking r-cran-xml (3.99-0.16.1-1) ... 140s Selecting previously unselected package r-cran-xtable. 140s Preparing to unpack .../150-r-cran-xtable_1%3a1.8-4-2_all.deb ... 140s Unpacking r-cran-xtable (1:1.8-4-2) ... 140s Selecting previously unselected package r-bioc-annotate. 140s Preparing to unpack .../151-r-bioc-annotate_1.80.0+dfsg-1_all.deb ... 140s Unpacking r-bioc-annotate (1.80.0+dfsg-1) ... 140s Selecting previously unselected package r-cran-generics. 140s Preparing to unpack .../152-r-cran-generics_0.1.3-1_all.deb ... 140s Unpacking r-cran-generics (0.1.3-1) ... 140s Selecting previously unselected package r-cran-magrittr. 140s Preparing to unpack .../153-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 140s Unpacking r-cran-magrittr (2.0.3-1) ... 140s Selecting previously unselected package r-cran-fansi. 140s Preparing to unpack .../154-r-cran-fansi_1.0.5-1_ppc64el.deb ... 140s Unpacking r-cran-fansi (1.0.5-1) ... 140s Selecting previously unselected package r-cran-utf8. 140s Preparing to unpack .../155-r-cran-utf8_1.2.4-1_ppc64el.deb ... 140s Unpacking r-cran-utf8 (1.2.4-1) ... 140s Selecting previously unselected package r-cran-pillar. 140s Preparing to unpack .../156-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 140s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 140s Selecting previously unselected package r-cran-tibble. 140s Preparing to unpack .../157-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 140s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 140s Selecting previously unselected package r-cran-withr. 140s Preparing to unpack .../158-r-cran-withr_2.5.0-1_all.deb ... 140s Unpacking r-cran-withr (2.5.0-1) ... 140s Selecting previously unselected package r-cran-tidyselect. 140s Preparing to unpack .../159-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 140s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 140s Selecting previously unselected package r-cran-dplyr. 140s Preparing to unpack .../160-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 140s Unpacking r-cran-dplyr (1.1.4-1) ... 140s Selecting previously unselected package r-cran-purrr. 140s Preparing to unpack .../161-r-cran-purrr_1.0.2-1_ppc64el.deb ... 140s Unpacking r-cran-purrr (1.0.2-1) ... 140s Selecting previously unselected package r-cran-stringi. 140s Preparing to unpack .../162-r-cran-stringi_1.8.3-1_ppc64el.deb ... 140s Unpacking r-cran-stringi (1.8.3-1) ... 140s Selecting previously unselected package r-cran-stringr. 140s Preparing to unpack .../163-r-cran-stringr_1.5.1-1_all.deb ... 140s Unpacking r-cran-stringr (1.5.1-1) ... 140s Selecting previously unselected package r-cran-tidyr. 140s Preparing to unpack .../164-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 140s Unpacking r-cran-tidyr (1.3.1-1) ... 140s Selecting previously unselected package r-cran-dbplyr. 140s Preparing to unpack .../165-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 140s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 140s Selecting previously unselected package r-cran-filelock. 140s Preparing to unpack .../166-r-cran-filelock_1.0.3-1_ppc64el.deb ... 140s Unpacking r-cran-filelock (1.0.3-1) ... 140s Selecting previously unselected package r-bioc-biocfilecache. 140s Preparing to unpack .../167-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 140s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 141s Selecting previously unselected package r-bioc-biocio. 141s Preparing to unpack .../168-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 141s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 141s Selecting previously unselected package r-cran-formatr. 141s Preparing to unpack .../169-r-cran-formatr_1.14-1_all.deb ... 141s Unpacking r-cran-formatr (1.14-1) ... 141s Selecting previously unselected package r-cran-lambda.r. 141s Preparing to unpack .../170-r-cran-lambda.r_1.2.4-2build1_all.deb ... 141s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 141s Selecting previously unselected package r-cran-futile.options. 141s Preparing to unpack .../171-r-cran-futile.options_1.0.1-3build1_all.deb ... 141s Unpacking r-cran-futile.options (1.0.1-3build1) ... 141s Selecting previously unselected package r-cran-futile.logger. 141s Preparing to unpack .../172-r-cran-futile.logger_1.4.3-4build1_all.deb ... 141s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 141s Selecting previously unselected package r-cran-snow. 141s Preparing to unpack .../173-r-cran-snow_1%3a0.4.4-2_all.deb ... 141s Unpacking r-cran-snow (1:0.4.4-2) ... 141s Selecting previously unselected package r-cran-codetools. 141s Preparing to unpack .../174-r-cran-codetools_0.2-19-1_all.deb ... 141s Unpacking r-cran-codetools (0.2-19-1) ... 141s Selecting previously unselected package r-cran-bh. 141s Preparing to unpack .../175-r-cran-bh_1.84.0-1_all.deb ... 141s Unpacking r-cran-bh (1.84.0-1) ... 141s Selecting previously unselected package r-bioc-biocparallel. 141s Preparing to unpack .../176-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 141s Unpacking r-bioc-biocparallel (1.36.0-1) ... 141s Selecting previously unselected package r-cran-hms. 141s Preparing to unpack .../177-r-cran-hms_1.1.3-1_all.deb ... 141s Unpacking r-cran-hms (1.1.3-1) ... 141s Selecting previously unselected package r-cran-prettyunits. 141s Preparing to unpack .../178-r-cran-prettyunits_1.2.0-1_all.deb ... 141s Unpacking r-cran-prettyunits (1.2.0-1) ... 141s Selecting previously unselected package r-cran-progress. 141s Preparing to unpack .../179-r-cran-progress_1.2.3-1_all.deb ... 141s Unpacking r-cran-progress (1.2.3-1) ... 141s Selecting previously unselected package r-cran-digest. 141s Preparing to unpack .../180-r-cran-digest_0.6.34-1_ppc64el.deb ... 141s Unpacking r-cran-digest (0.6.34-1) ... 141s Selecting previously unselected package r-cran-rappdirs. 141s Preparing to unpack .../181-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 141s Unpacking r-cran-rappdirs (0.3.3-1) ... 141s Selecting previously unselected package r-cran-xml2. 141s Preparing to unpack .../182-r-cran-xml2_1.3.6-1_ppc64el.deb ... 141s Unpacking r-cran-xml2 (1.3.6-1) ... 141s Selecting previously unselected package r-bioc-biomart. 141s Preparing to unpack .../183-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 141s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 141s Selecting previously unselected package r-bioc-genomicranges. 141s Preparing to unpack .../184-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 141s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 141s Selecting previously unselected package r-bioc-rhtslib. 141s Preparing to unpack .../185-r-bioc-rhtslib_2.4.1+dfsg-1_ppc64el.deb ... 141s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 141s Selecting previously unselected package r-bioc-rsamtools. 141s Preparing to unpack .../186-r-bioc-rsamtools_2.18.0+dfsg-1build1_ppc64el.deb ... 141s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 141s Selecting previously unselected package r-cran-matrixstats. 141s Preparing to unpack .../187-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 141s Unpacking r-cran-matrixstats (1.2.0-1) ... 141s Selecting previously unselected package r-bioc-matrixgenerics. 141s Preparing to unpack .../188-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 141s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 141s Selecting previously unselected package r-cran-lattice. 141s Preparing to unpack .../189-r-cran-lattice_0.22-5-1_ppc64el.deb ... 141s Unpacking r-cran-lattice (0.22-5-1) ... 141s Selecting previously unselected package r-cran-matrix. 141s Preparing to unpack .../190-r-cran-matrix_1.6-5-1_ppc64el.deb ... 141s Unpacking r-cran-matrix (1.6-5-1) ... 141s Selecting previously unselected package r-cran-abind. 141s Preparing to unpack .../191-r-cran-abind_1.4-5-2_all.deb ... 141s Unpacking r-cran-abind (1.4-5-2) ... 141s Selecting previously unselected package r-bioc-s4arrays. 141s Preparing to unpack .../192-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 141s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 141s Selecting previously unselected package r-bioc-sparsearray. 141s Preparing to unpack .../193-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 141s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 142s Selecting previously unselected package r-bioc-delayedarray. 142s Preparing to unpack .../194-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 142s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-summarizedexperiment. 142s Preparing to unpack .../195-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 142s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-genomicalignments. 142s Preparing to unpack .../196-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 142s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 142s Selecting previously unselected package r-cran-littler. 142s Preparing to unpack .../197-r-cran-littler_0.3.19-1_ppc64el.deb ... 142s Unpacking r-cran-littler (0.3.19-1) ... 142s Selecting previously unselected package r-cran-rjson. 142s Preparing to unpack .../198-r-cran-rjson_0.2.21-1_ppc64el.deb ... 142s Unpacking r-cran-rjson (0.2.21-1) ... 142s Selecting previously unselected package r-cran-yaml. 142s Preparing to unpack .../199-r-cran-yaml_2.3.8-1_ppc64el.deb ... 142s Unpacking r-cran-yaml (2.3.8-1) ... 142s Selecting previously unselected package r-cran-restfulr. 142s Preparing to unpack .../200-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 142s Unpacking r-cran-restfulr (0.0.15-1) ... 142s Selecting previously unselected package r-bioc-rtracklayer. 142s Preparing to unpack .../201-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 142s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 142s Selecting previously unselected package r-bioc-bsgenome. 142s Preparing to unpack .../202-r-bioc-bsgenome_1.70.2-1_all.deb ... 142s Unpacking r-bioc-bsgenome (1.70.2-1) ... 142s Selecting previously unselected package r-cran-survival. 142s Preparing to unpack .../203-r-cran-survival_3.5-8-1_ppc64el.deb ... 142s Unpacking r-cran-survival (3.5-8-1) ... 142s Selecting previously unselected package r-bioc-genefilter. 142s Preparing to unpack .../204-r-bioc-genefilter_1.84.0-1_ppc64el.deb ... 142s Unpacking r-bioc-genefilter (1.84.0-1) ... 142s Selecting previously unselected package r-bioc-genomicfeatures. 142s Preparing to unpack .../205-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 142s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 142s Selecting previously unselected package r-cran-statmod. 142s Preparing to unpack .../206-r-cran-statmod_1.5.0-1_ppc64el.deb ... 142s Unpacking r-cran-statmod (1.5.0-1) ... 142s Selecting previously unselected package r-bioc-limma. 142s Preparing to unpack .../207-r-bioc-limma_3.58.1+dfsg-1_ppc64el.deb ... 142s Unpacking r-bioc-limma (3.58.1+dfsg-1) ... 142s Selecting previously unselected package r-bioc-org.hs.eg.db. 142s Preparing to unpack .../208-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 142s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 145s Selecting previously unselected package r-cran-runit. 145s Preparing to unpack .../209-r-cran-runit_0.4.32-3_all.deb ... 145s Unpacking r-cran-runit (0.4.32-3) ... 145s Selecting previously unselected package autopkgtest-satdep. 145s Preparing to unpack .../210-1-autopkgtest-satdep.deb ... 145s Unpacking autopkgtest-satdep (0) ... 145s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 145s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 145s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 145s Setting up libpaper1:ppc64el (1.1.29) ... 145s 145s Creating config file /etc/papersize with new version 145s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 145s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 145s Setting up libdatrie1:ppc64el (0.2.13-3) ... 145s Setting up libxcb-render0:ppc64el (1.15-1) ... 145s Setting up unzip (6.0-28ubuntu3) ... 145s Setting up x11-common (1:7.7+23ubuntu2) ... 145s Setting up node-html5shiv (3.7.3+dfsg-5) ... 145s Setting up libpsl5t64:ppc64el (0.21.2-1.1) ... 145s Setting up libdeflate0:ppc64el (1.19-1) ... 145s Setting up linux-libc-dev:ppc64el (6.8.0-11.11) ... 145s Setting up libxcb-shm0:ppc64el (1.15-1) ... 145s Setting up libpaper-utils (1.1.29) ... 145s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 145s Setting up libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 145s Setting up zip (3.0-13) ... 145s Setting up libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 145s Setting up libblas3:ppc64el (3.12.0-3) ... 145s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 145s Setting up libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 145s Setting up libpkgconf3:ppc64el (1.8.1-2) ... 145s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 145s Setting up libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up fonts-dejavu-mono (2.37-8) ... 145s Setting up libmpc3:ppc64el (1.3.1-1) ... 145s Setting up libatomic1:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 145s Setting up icu-devtools (74.2-1ubuntu1) ... 145s Setting up fonts-dejavu-core (2.37-8) ... 145s Setting up pkgconf-bin (1.8.1-2) ... 145s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 145s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 145s Setting up liblzma-dev:ppc64el (5.4.5-0.3) ... 145s Setting up libubsan1:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 145s Setting up libnsl-dev:ppc64el (1.3.0-3) ... 145s Setting up libcrypt-dev:ppc64el (1:4.4.36-4) ... 145s Setting up libasan8:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 145s Setting up libthai-data (0.1.29-2) ... 145s Setting up libxss1:ppc64el (1:1.2.3-1build2) ... 145s Setting up libtsan2:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 145s Setting up libisl23:ppc64el (0.26-3) ... 145s Setting up libc-dev-bin (2.39-0ubuntu2) ... 145s Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 145s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 145s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 145s Setting up libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up liblsan0:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up libblas-dev:ppc64el (3.12.0-3) ... 145s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode 145s Setting up dctrl-tools (2.24-3build2) ... 145s Setting up libitm1:ppc64el (14-20240303-1ubuntu1) ... 145s Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 145s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 145s Setting up libice6:ppc64el (2:1.0.10-1build2) ... 145s Setting up liblapack3:ppc64el (3.12.0-3) ... 145s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 145s Setting up cpp-13 (13.2.0-17ubuntu2) ... 145s Setting up libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 145s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 146s Setting up pkgconf:ppc64el (1.8.1-2) ... 146s Setting up libthai0:ppc64el (0.1.29-2) ... 146s Setting up liblapack-dev:ppc64el (3.12.0-3) ... 146s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode 146s Setting up pkg-config:ppc64el (1.8.1-2) ... 146s Setting up libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 146s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 146s Setting up cpp (4:13.2.0-7ubuntu1) ... 146s Setting up libc6-dev:ppc64el (2.39-0ubuntu2) ... 146s Setting up curl (8.5.0-2ubuntu7) ... 146s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 146s Setting up libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 146s Setting up libsm6:ppc64el (2:1.2.3-1build2) ... 146s Setting up libicu-dev:ppc64el (74.2-1ubuntu1) ... 146s Setting up libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 146s Setting up libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 146s Setting up fontconfig (2.15.0-1ubuntu1) ... 148s Regenerating fonts cache... done. 148s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 148s Setting up libxft2:ppc64el (2.3.6-1) ... 148s Setting up libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 148s Setting up libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 148s Setting up libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 148s Setting up libtk8.6:ppc64el (8.6.13-2) ... 148s Setting up libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 148s Setting up libreadline-dev:ppc64el (8.2-3) ... 148s Setting up libcairo2:ppc64el (1.18.0-1) ... 148s Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 148s Setting up gcc-13 (13.2.0-17ubuntu2) ... 148s Setting up libxt6:ppc64el (1:1.2.1-1.1) ... 148s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 148s Setting up libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 148s Setting up libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 148s Setting up libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 148s Setting up libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 148s Setting up gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 148s Setting up libpng-dev:ppc64el (1.6.43-1) ... 148s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ... 148s Setting up g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 148s Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 148s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 148s Setting up r-base-core (4.3.2-1build1) ... 148s 148s Creating config file /etc/R/Renviron with new version 148s Setting up r-cran-crayon (1.5.2-1) ... 148s Setting up r-cran-futile.options (1.0.1-3build1) ... 148s Setting up r-cran-lattice (0.22-5-1) ... 148s Setting up r-cran-formatr (1.14-1) ... 148s Setting up r-cran-xml (3.99-0.16.1-1) ... 148s Setting up r-cran-statmod (1.5.0-1) ... 148s Setting up r-cran-r6 (2.5.1-1) ... 148s Setting up r-cran-magrittr (2.0.3-1) ... 148s Setting up r-cran-rappdirs (0.3.3-1) ... 148s Setting up r-cran-filelock (1.0.3-1) ... 148s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 148s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 148s Setting up r-cran-littler (0.3.19-1) ... 148s Setting up r-cran-bh (1.84.0-1) ... 148s Setting up r-cran-curl (5.2.0+dfsg-1) ... 148s Setting up r-cran-codetools (0.2-19-1) ... 148s Setting up g++-13 (13.2.0-17ubuntu2) ... 148s Setting up r-bioc-biocgenerics (0.48.1-2) ... 148s Setting up r-cran-rlang (1.1.3-1) ... 148s Setting up r-cran-matrixstats (1.2.0-1) ... 148s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 148s Setting up r-cran-sys (3.4.2-1) ... 148s Setting up r-cran-plogr (0.2.0-3build1) ... 148s Setting up r-cran-withr (2.5.0-1) ... 148s Setting up r-cran-mime (0.12-1) ... 148s Setting up r-cran-generics (0.1.3-1) ... 148s Setting up r-cran-abind (1.4-5-2) ... 148s Setting up r-cran-digest (0.6.34-1) ... 148s Setting up r-cran-yaml (2.3.8-1) ... 148s Setting up r-cran-lambda.r (1.2.4-2build1) ... 148s Setting up r-cran-dbi (1.2.2-1) ... 148s Setting up r-cran-prettyunits (1.2.0-1) ... 148s Setting up r-cran-fansi (1.0.5-1) ... 148s Setting up r-cran-snow (1:0.4.4-2) ... 148s Setting up r-cran-glue (1.7.0-1) ... 148s Setting up r-cran-bit (4.0.5-1) ... 148s Setting up r-cran-xtable (1:1.8-4-2) ... 148s Setting up r-cran-cli (3.6.2-1) ... 148s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 148s Setting up r-cran-bitops (1.0-7-1) ... 148s Setting up r-cran-bit64 (4.0.5-1) ... 148s Setting up gcc (4:13.2.0-7ubuntu1) ... 148s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 148s Setting up r-cran-askpass (1.2.0-1) ... 148s Setting up r-cran-fastmap (1.1.1-1) ... 148s Setting up r-cran-png (0.1-8-1) ... 148s Setting up r-bioc-biobase (2.62.0-1) ... 148s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 148s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 148s Setting up r-cran-utf8 (1.2.4-1) ... 148s Setting up gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 148s Setting up r-cran-stringi (1.8.3-1) ... 148s Setting up r-cran-cpp11 (0.4.7-1) ... 148s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 148s Setting up r-cran-runit (0.4.32-3) ... 148s Setting up r-cran-futile.logger (1.4.3-4build1) ... 148s Setting up r-bioc-limma (3.58.1+dfsg-1) ... 148s Setting up r-cran-matrix (1.6-5-1) ... 148s Setting up g++ (4:13.2.0-7ubuntu1) ... 148s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 148s Setting up r-cran-cachem (1.0.8-1) ... 148s Setting up build-essential (12.10ubuntu1) ... 148s Setting up r-bioc-iranges (2.36.0-1) ... 148s Setting up r-cran-rjson (0.2.21-1) ... 148s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 148s Setting up r-cran-restfulr (0.0.15-1) ... 148s Setting up r-cran-vctrs (0.6.5-1) ... 148s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 148s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 148s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 148s Setting up r-cran-stringr (1.5.1-1) ... 148s Setting up r-bioc-biocparallel (1.36.0-1) ... 148s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 148s Setting up r-cran-xml2 (1.3.6-1) ... 148s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 148s Setting up r-cran-survival (3.5-8-1) ... 148s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 148s Setting up gfortran (4:13.2.0-7ubuntu1) ... 148s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 148s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 148s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 148s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 148s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 148s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 148s Setting up r-cran-httr (1.4.7+dfsg-1) ... 148s Setting up r-cran-hms (1.1.3-1) ... 148s Setting up r-cran-memoise (2.0.1-1) ... 148s Setting up r-cran-purrr (1.0.2-1) ... 148s Setting up r-cran-blob (1.2.4-1) ... 148s Setting up r-bioc-xvector (0.42.0-1) ... 148s Setting up r-cran-dplyr (1.1.4-1) ... 148s Setting up r-cran-rsqlite (2.3.4-1) ... 148s Setting up r-cran-progress (1.2.3-1) ... 148s Setting up r-base-dev (4.3.2-1build1) ... 148s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 148s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 148s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 148s Setting up r-cran-tidyr (1.3.1-1) ... 148s Setting up r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 148s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 148s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 148s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 148s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 148s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 148s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 148s Setting up r-bioc-annotationdbi (1.64.1-1) ... 148s Setting up r-bioc-annotate (1.80.0+dfsg-1) ... 148s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 148s Setting up r-bioc-genefilter (1.84.0-1) ... 148s Setting up r-bioc-genomicalignments (1.38.2-1) ... 148s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 148s Setting up r-bioc-rtracklayer (1.62.0-1) ... 148s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 148s Setting up r-bioc-bsgenome (1.70.2-1) ... 148s Setting up autopkgtest-satdep (0) ... 148s Processing triggers for man-db (2.12.0-3) ... 149s Processing triggers for install-info (7.1-3) ... 150s Processing triggers for libc-bin (2.39-0ubuntu2) ... 155s (Reading database ... 100609 files and directories currently installed.) 155s Removing autopkgtest-satdep (0) ... 156s autopkgtest [21:49:19]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 156s autopkgtest [21:49:19]: test pkg-r-autopkgtest: [----------------------- 156s Test: Try to load the R library rtracklayer 156s 156s R version 4.3.2 (2023-10-31) -- "Eye Holes" 156s Copyright (C) 2023 The R Foundation for Statistical Computing 156s Platform: powerpc64le-unknown-linux-gnu (64-bit) 156s 156s R is free software and comes with ABSOLUTELY NO WARRANTY. 156s You are welcome to redistribute it under certain conditions. 156s Type 'license()' or 'licence()' for distribution details. 156s 156s R is a collaborative project with many contributors. 156s Type 'contributors()' for more information and 156s 'citation()' on how to cite R or R packages in publications. 156s 156s Type 'demo()' for some demos, 'help()' for on-line help, or 156s 'help.start()' for an HTML browser interface to help. 156s Type 'q()' to quit R. 156s 156s > library('rtracklayer') 156s Loading required package: GenomicRanges 156s Loading required package: stats4 156s Loading required package: BiocGenerics 157s 157s Attaching package: ‘BiocGenerics’ 157s 157s The following objects are masked from ‘package:stats’: 157s 157s IQR, mad, sd, var, xtabs 157s 157s The following objects are masked from ‘package:base’: 157s 157s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 157s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 157s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 157s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 157s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 157s table, tapply, union, unique, unsplit, which.max, which.min 157s 157s Loading required package: S4Vectors 157s 157s Attaching package: ‘S4Vectors’ 157s 157s The following object is masked from ‘package:utils’: 157s 157s findMatches 157s 157s The following objects are masked from ‘package:base’: 157s 157s expand.grid, I, unname 157s 157s Loading required package: IRanges 158s Loading required package: GenomeInfoDb 166s > 166s > 166s Other tests are currently unsupported! 166s They will be progressively added. 166s autopkgtest [21:49:29]: test pkg-r-autopkgtest: -----------------------] 167s autopkgtest [21:49:30]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 167s pkg-r-autopkgtest PASS 167s autopkgtest [21:49:30]: @@@@@@@@@@@@@@@@@@@@ summary 167s pkg-r-autopkgtest PASS 178s Creating nova instance adt-noble-ppc64el-r-bioc-rtracklayer-20240317-214643-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...