0s autopkgtest [21:28:34]: starting date and time: 2024-03-17 21:28:34+0000 0s autopkgtest [21:28:34]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:28:34]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.gq3brye1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-bioc-rsamtools,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-edaseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-12.secgroup --name adt-noble-ppc64el-r-bioc-edaseq-20240317-212834-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 96s autopkgtest [21:30:10]: testbed dpkg architecture: ppc64el 96s autopkgtest [21:30:10]: testbed apt version: 2.7.12 96s autopkgtest [21:30:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 98s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 98s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [484 kB] 98s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 98s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3676 kB] 98s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 98s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 98s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 98s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 98s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 98s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3974 kB] 99s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 99s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 99s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 102s Fetched 9012 kB in 3s (3429 kB/s) 102s Reading package lists... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s Calculating upgrade... 105s The following packages will be REMOVED: 105s libssl3 105s The following NEW packages will be installed: 105s libssl3t64 105s The following packages have been kept back: 105s curl 105s The following packages will be upgraded: 105s openssl 106s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 106s Need to get 3195 kB of archives. 106s After this operation, 6144 B of additional disk space will be used. 106s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 106s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 107s Fetched 3195 kB in 1s (3209 kB/s) 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 107s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 107s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 107s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 107s wget depends on libssl3 (>= 3.0.0). 107s tnftp depends on libssl3 (>= 3.0.0). 107s tcpdump depends on libssl3 (>= 3.0.0). 107s systemd-resolved depends on libssl3 (>= 3.0.0). 107s systemd depends on libssl3 (>= 3.0.0). 107s sudo depends on libssl3 (>= 3.0.0). 107s rsync depends on libssl3 (>= 3.0.0). 107s python3-cryptography depends on libssl3 (>= 3.0.0). 107s openssh-server depends on libssl3 (>= 3.0.10). 107s openssh-client depends on libssl3 (>= 3.0.10). 107s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 107s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 107s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 107s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 107s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 107s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 107s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 107s libnvme1 depends on libssl3 (>= 3.0.0). 107s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 107s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 107s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 107s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 107s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 107s kmod depends on libssl3 (>= 3.0.0). 107s dhcpcd-base depends on libssl3 (>= 3.0.0). 107s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 107s 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 107s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 107s Selecting previously unselected package libssl3t64:ppc64el. 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 107s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 107s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 107s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 107s Setting up openssl (3.0.13-0ubuntu1) ... 107s Processing triggers for man-db (2.12.0-3) ... 108s Processing triggers for libc-bin (2.39-0ubuntu2) ... 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 109s sh: Attempting to set up Debian/Ubuntu apt sources automatically 109s sh: Distribution appears to be Ubuntu 110s Reading package lists... 110s Building dependency tree... 110s Reading state information... 110s eatmydata is already the newest version (131-1). 110s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s dbus is already the newest version (1.14.10-4ubuntu1). 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s rng-tools-debian is already the newest version (2.4). 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s The following packages will be REMOVED: 111s cloud-init* python3-configobj* python3-debconf* 112s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 112s After this operation, 3252 kB disk space will be freed. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 112s Removing cloud-init (24.1.1-0ubuntu1) ... 112s Removing python3-configobj (5.0.8-3) ... 112s Removing python3-debconf (1.5.86) ... 112s Processing triggers for man-db (2.12.0-3) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69708 files and directories currently installed.) 113s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 113s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 113s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 113s invoke-rc.d: policy-rc.d denied execution of try-restart. 113s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s linux-generic is already the newest version (6.8.0-11.11+1). 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 114s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 114s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 117s Reading package lists... 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s Calculating upgrade... 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s autopkgtest [21:30:32]: rebooting testbed after setup commands that affected boot 152s autopkgtest [21:31:06]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 154s autopkgtest [21:31:08]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-edaseq 156s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-edaseq 2.36.0+dfsg-1 (dsc) [2311 B] 156s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-edaseq 2.36.0+dfsg-1 (tar) [119 kB] 156s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-edaseq 2.36.0+dfsg-1 (diff) [5568 B] 156s gpgv: Signature made Fri Dec 1 09:50:17 2023 UTC 156s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 156s gpgv: issuer "tillea@rki.de" 156s gpgv: Can't check signature: No public key 156s dpkg-source: warning: cannot verify inline signature for ./r-bioc-edaseq_2.36.0+dfsg-1.dsc: no acceptable signature found 156s autopkgtest [21:31:10]: testing package r-bioc-edaseq version 2.36.0+dfsg-1 157s autopkgtest [21:31:11]: build not needed 158s autopkgtest [21:31:12]: test pkg-r-autopkgtest: preparing testbed 160s Reading package lists... 160s Building dependency tree... 160s Reading state information... 160s Starting pkgProblemResolver with broken count: 0 160s Starting 2 pkgProblemResolver with broken count: 0 160s Done 161s The following additional packages will be installed: 161s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 161s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 161s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 161s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 161s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 161s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 161s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 161s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 161s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 161s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 161s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 161s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 161s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 161s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 161s libjs-highlight.js libjs-jquery libjs-jquery-datatables 161s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 161s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 161s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 161s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 161s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 161s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 161s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 161s libpng-dev libpotrace0 libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 161s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 161s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 161s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 161s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 161s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 161s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 161s r-bioc-annotationdbi r-bioc-aroma.light r-bioc-biobase r-bioc-biocfilecache 161s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 161s r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 161s r-bioc-edaseq r-bioc-edger r-bioc-genomeinfodb r-bioc-genomeinfodbdata 161s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 161s r-bioc-iranges r-bioc-keggrest r-bioc-limma r-bioc-matrixgenerics 161s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 161s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 161s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 161s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 161s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio 161s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools 161s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 161s r-cran-dbi r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-diffobj 161s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 161s r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 161s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 161s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 161s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-hwriter 161s r-cran-interp r-cran-isoband r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 161s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 161s r-cran-lattice r-cran-latticeextra r-cran-lifecycle r-cran-littler 161s r-cran-locfit r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 161s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 161s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 161s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 161s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 161s r-cran-purrr r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 161s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo 161s r-cran-rcppeigen r-cran-rcurl r-cran-rematch2 r-cran-restfulr r-cran-rjson 161s r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite r-cran-sass 161s r-cran-scales r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-statmod 161s r-cran-stringi r-cran-stringr r-cran-sys r-cran-testthat r-cran-tibble 161s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 161s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 161s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 161s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 161s x11-common xdg-utils zip zlib1g-dev 161s Suggested packages: 161s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 161s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 161s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 161s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 161s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 161s libboost-context1.83-dev libboost-contract1.83-dev 161s libboost-coroutine1.83-dev libboost-date-time1.83-dev 161s libboost-exception1.83-dev libboost-fiber1.83-dev 161s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 161s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 161s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 161s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 161s libboost-numpy1.83-dev libboost-program-options1.83-dev 161s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 161s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 161s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 161s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 161s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 161s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 161s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 161s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 161s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 161s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 161s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 161s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 161s r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db r-bioc-graph r-cran-princurve 161s r-bioc-all r-bioc-affy r-bioc-annotate r-cran-foreach r-cran-bbmisc 161s r-cran-doparallel r-bioc-variantannotation r-cran-batchtools 161s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-bsgenome 161s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 161s r-cran-pheatmap r-bioc-tximport r-bioc-tximeta r-bioc-tximportdata 161s r-cran-readr r-cran-pbapply r-bioc-glmgampoi r-bioc-rhdf5 161s r-cran-seuratobject r-bioc-ensembldb r-bioc-annotationfilter r-cran-markdown 161s r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq r-cran-biasedurn 161s r-cran-ellipse r-cran-gplots r-bioc-sparsematrixstats r-cran-roxygen2 161s r-cran-ff r-cran-covr r-cran-spelling r-cran-kernlab r-cran-mvtnorm 161s r-cran-vcd r-cran-shinyjs r-cran-viridis r-cran-rstudioapi r-cran-rmysql 161s r-cran-polyclip r-cran-lubridate r-cran-sp r-cran-gridextra 161s r-cran-scatterplot3d r-cran-magick r-cran-sf r-cran-getopt r-cran-gam 161s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-survival 161s r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer 161s r-cran-bench r-cran-here r-cran-plm r-cran-zoo debhelper ghostscript gv 161s | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 161s texlive-latex-base-doc wp2latex 161s Recommended packages: 161s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 161s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 161s r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui r-cran-rsconnect 161s r-cran-testit r-cran-tufte r-cran-webshot r-cran-covr r-cran-thematic 161s r-cran-cliapp r-cran-mockery r-cran-whoami r-cran-bench r-cran-decor 161s r-cran-lobstr r-cran-spelling r-cran-webutils r-cran-rpostgresql r-cran-gh 161s r-cran-broom r-cran-rmysql r-cran-unitizer r-cran-rsvg r-cran-survival 161s r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp 161s r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf 161s r-cran-svglite r-cran-vdiffr r-cran-cairo r-cran-markdown r-cran-readr 161s r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl 161s r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 161s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-mathjaxr r-cran-mockr 161s r-cran-webfakes r-cran-future r-cran-pingr r-cran-runit r-cran-usethis 161s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-rvest r-cran-dichromat 161s r-cran-data.table r-cran-formattable r-cran-pkgdown r-cran-zeallot 161s r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl 161s libx11-protocol-perl x11-utils x11-xserver-utils 161s The following NEW packages will be installed: 161s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 161s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 161s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 161s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 161s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 161s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 161s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 161s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 161s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 161s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 161s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 161s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 161s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 161s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 161s libjs-highlight.js libjs-jquery libjs-jquery-datatables 161s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 161s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 161s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 161s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 161s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 161s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 161s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 161s libpng-dev libpotrace0 libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 161s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 161s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 161s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 161s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 161s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 161s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 161s r-bioc-annotationdbi r-bioc-aroma.light r-bioc-biobase r-bioc-biocfilecache 161s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 161s r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 161s r-bioc-edaseq r-bioc-edger r-bioc-genomeinfodb r-bioc-genomeinfodbdata 161s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 161s r-bioc-iranges r-bioc-keggrest r-bioc-limma r-bioc-matrixgenerics 161s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 161s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 161s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 161s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 161s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio 161s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools 161s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 161s r-cran-dbi r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-diffobj 161s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 161s r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 161s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 161s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 161s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-hwriter 161s r-cran-interp r-cran-isoband r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 161s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 161s r-cran-lattice r-cran-latticeextra r-cran-lifecycle r-cran-littler 161s r-cran-locfit r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 161s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 161s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 161s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 161s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 161s r-cran-purrr r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 161s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo 161s r-cran-rcppeigen r-cran-rcurl r-cran-rematch2 r-cran-restfulr r-cran-rjson 161s r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite r-cran-sass 161s r-cran-scales r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-statmod 161s r-cran-stringi r-cran-stringr r-cran-sys r-cran-testthat r-cran-tibble 161s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 161s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 161s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 161s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 161s x11-common xdg-utils zip zlib1g-dev 161s 0 upgraded, 319 newly installed, 0 to remove and 0 not upgraded. 161s Need to get 464 MB/464 MB of archives. 161s After this operation, 1471 MB of additional disk space will be used. 161s Get:1 /tmp/autopkgtest.nNyKzh/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [780 B] 161s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 161s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 162s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 162s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 162s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 162s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 162s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 162s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 162s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 162s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 163s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 163s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 163s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 163s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 163s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 163s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 163s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 163s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 163s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 163s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 163s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 163s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 163s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 163s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 164s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 164s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 164s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 164s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 164s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 165s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 165s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 165s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 165s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 165s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 165s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 165s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 165s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 165s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 165s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 165s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 165s Get:42 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 165s Get:43 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 165s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 165s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 165s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 165s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 165s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 165s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 165s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 165s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 165s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 165s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 165s Get:54 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 165s Get:55 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 165s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 165s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 165s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 166s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 166s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 166s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 166s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 166s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 166s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 166s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 166s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 166s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 166s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 166s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 166s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 166s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 166s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 166s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 167s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 167s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 167s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 167s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 167s Get:78 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 167s Get:79 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 167s Get:80 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 167s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 167s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 167s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 167s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 167s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 167s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 167s Get:87 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 167s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 167s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 167s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 167s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 167s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 167s Get:93 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9 [71.2 kB] 167s Get:94 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 167s Get:95 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 167s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 167s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 167s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 167s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 167s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 167s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 167s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 167s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 167s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 167s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 168s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 168s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 168s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 168s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 168s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 168s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 168s Get:112 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 168s Get:113 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9 [42.9 kB] 168s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 168s Get:115 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 168s Get:116 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 168s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9 [68.6 kB] 168s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 168s Get:119 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 168s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9 [163 kB] 168s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 168s Get:122 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 168s Get:123 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 168s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 168s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 168s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 169s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 169s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3 [57.2 kB] 169s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 169s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1 [227 kB] 169s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 169s Get:132 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13 ppc64el 0.13.72+dfsg.1-1.1 [29.7 kB] 169s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 169s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 169s Get:135 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 169s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 173s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 173s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el littler all 0.3.19-1 [2472 B] 173s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 173s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 173s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 173s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 173s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 176s Get:144 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 176s Get:145 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 176s Get:146 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 176s Get:147 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 176s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 176s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 176s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 176s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 176s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 176s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 176s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 177s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 177s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 177s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 177s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 177s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 177s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 177s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 177s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 177s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 177s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 177s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 177s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 177s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 177s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 177s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 178s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 178s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 178s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 178s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 178s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 178s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 178s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 178s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 178s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 178s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 178s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 178s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 178s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 178s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 180s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 180s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 180s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 182s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 182s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 183s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 183s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r.oo all 1.26.0-1 [955 kB] 183s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r.utils all 2.12.3-1 [1386 kB] 183s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 183s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-aroma.light all 3.32.0-1 [576 kB] 183s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 183s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 183s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 183s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 183s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 183s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 183s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 183s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 183s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 184s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 184s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 184s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 184s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 184s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 184s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 184s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 184s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 184s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 184s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 184s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 184s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 184s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 184s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 185s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 185s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 185s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 185s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 185s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 185s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 185s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 185s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 185s Get:225 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 185s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 185s Get:227 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 185s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 185s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 185s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1 [231 kB] 185s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 185s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 185s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 185s Get:234 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 185s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 185s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 185s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 185s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 185s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 185s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 185s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1 [527 kB] 185s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 185s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 185s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 185s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 185s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 186s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 186s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 186s Get:249 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 186s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 186s Get:251 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 186s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9 [12.4 MB] 186s Get:253 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 186s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 187s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 189s Get:256 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 189s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 189s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 189s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 189s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 189s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 189s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 189s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 189s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 189s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 189s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 189s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 189s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 189s Get:269 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 189s Get:270 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 189s Get:271 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 189s Get:272 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-locfit ppc64el 1.5-9.8-1 [570 kB] 189s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 189s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 189s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 189s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-nlme ppc64el 3.1.164-1 [2281 kB] 189s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB] 189s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-farver ppc64el 2.1.1-1 [1365 kB] 189s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 189s Get:280 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-colorspace ppc64el 2.1-0+dfsg-1 [1542 kB] 189s Get:281 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-munsell all 0.5.0-2build1 [208 kB] 189s Get:282 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 189s Get:283 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB] 189s Get:284 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB] 189s Get:285 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 189s Get:286 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpparmadillo ppc64el 0.12.8.0.0-1 [874 kB] 189s Get:287 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-deseq2 ppc64el 1.42.0+dfsg-1 [1234 kB] 189s Get:288 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-1 [1548 kB] 189s Get:289 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1 [3801 kB] 190s Get:290 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 190s Get:291 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hwriter all 1.3.2.1-1 [106 kB] 190s Get:292 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jpeg ppc64el 0.1-10-1 [37.0 kB] 190s Get:293 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-deldir ppc64el 2.0-4-1 [273 kB] 190s Get:294 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcppeigen ppc64el 0.3.3.9.4-1 [1216 kB] 190s Get:295 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-interp ppc64el 1.1-6-1 [1492 kB] 190s Get:296 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-latticeextra all 0.6-30-1 [2198 kB] 190s Get:297 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-shortread ppc64el 1.60.0-2 [5208 kB] 190s Get:298 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 190s Get:299 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 190s Get:300 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 190s Get:301 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 190s Get:302 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-edaseq all 2.36.0+dfsg-1 [384 kB] 190s Get:303 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-statmod ppc64el 1.5.0-1 [298 kB] 190s Get:304 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-limma ppc64el 3.58.1+dfsg-1 [1900 kB] 190s Get:305 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-edger ppc64el 4.0.16+dfsg-1 [1161 kB] 191s Get:306 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-brio ppc64el 1.1.4-1 [38.2 kB] 191s Get:307 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ps ppc64el 1.7.6-1 [317 kB] 191s Get:308 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-processx ppc64el 3.8.3-1 [351 kB] 191s Get:309 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-callr all 3.7.3-2 [425 kB] 191s Get:310 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-desc all 1.4.3-1 [359 kB] 191s Get:311 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-diffobj ppc64el 0.3.5-1 [1118 kB] 191s Get:312 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-kernsmooth ppc64el 2.23-22-1 [94.6 kB] 191s Get:313 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgbuild all 1.4.3-1 [209 kB] 191s Get:314 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rprojroot all 2.0.4-1 [124 kB] 191s Get:315 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgload all 1.3.4-1 [207 kB] 191s Get:316 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-praise all 1.0.0-4build1 [20.3 kB] 191s Get:317 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 191s Get:318 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-waldo all 0.5.2-1build1 [120 kB] 191s Get:319 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-testthat ppc64el 3.2.1-1 [1693 kB] 192s Preconfiguring packages ... 192s Fetched 464 MB in 30s (15.3 MB/s) 192s Selecting previously unselected package libc-dev-bin. 192s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69653 files and directories currently installed.) 192s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 192s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 192s Selecting previously unselected package linux-libc-dev:ppc64el. 192s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 192s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 192s Selecting previously unselected package libcrypt-dev:ppc64el. 192s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 192s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 192s Selecting previously unselected package libtirpc-dev:ppc64el. 192s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 192s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 192s Selecting previously unselected package libnsl-dev:ppc64el. 192s Preparing to unpack .../004-libnsl-dev_1.3.0-3_ppc64el.deb ... 192s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 192s Selecting previously unselected package rpcsvc-proto. 192s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 192s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 192s Selecting previously unselected package libc6-dev:ppc64el. 192s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 192s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 192s Selecting previously unselected package libisl23:ppc64el. 192s Preparing to unpack .../007-libisl23_0.26-3_ppc64el.deb ... 192s Unpacking libisl23:ppc64el (0.26-3) ... 192s Selecting previously unselected package libmpc3:ppc64el. 192s Preparing to unpack .../008-libmpc3_1.3.1-1_ppc64el.deb ... 192s Unpacking libmpc3:ppc64el (1.3.1-1) ... 192s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 192s Preparing to unpack .../009-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 192s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 193s Selecting previously unselected package cpp-13. 193s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 193s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 193s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 193s Preparing to unpack .../011-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 193s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 193s Selecting previously unselected package cpp. 193s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 193s Unpacking cpp (4:13.2.0-7ubuntu1) ... 193s Selecting previously unselected package libcc1-0:ppc64el. 193s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libgomp1:ppc64el. 193s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libitm1:ppc64el. 193s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libatomic1:ppc64el. 193s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libasan8:ppc64el. 193s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package liblsan0:ppc64el. 193s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libtsan2:ppc64el. 193s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libubsan1:ppc64el. 193s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libquadmath0:ppc64el. 193s Preparing to unpack .../021-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 193s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 193s Selecting previously unselected package libgcc-13-dev:ppc64el. 193s Preparing to unpack .../022-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 193s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 193s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 193s Preparing to unpack .../023-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 193s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 194s Selecting previously unselected package gcc-13. 194s Preparing to unpack .../024-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 194s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 194s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 194s Preparing to unpack .../025-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 194s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 194s Selecting previously unselected package gcc. 194s Preparing to unpack .../026-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 194s Unpacking gcc (4:13.2.0-7ubuntu1) ... 194s Selecting previously unselected package libstdc++-13-dev:ppc64el. 194s Preparing to unpack .../027-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 194s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 194s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 194s Preparing to unpack .../028-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 194s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 194s Selecting previously unselected package g++-13. 194s Preparing to unpack .../029-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 194s Unpacking g++-13 (13.2.0-17ubuntu2) ... 194s Selecting previously unselected package g++-powerpc64le-linux-gnu. 194s Preparing to unpack .../030-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 194s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 194s Selecting previously unselected package g++. 194s Preparing to unpack .../031-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 194s Unpacking g++ (4:13.2.0-7ubuntu1) ... 194s Selecting previously unselected package build-essential. 194s Preparing to unpack .../032-build-essential_12.10ubuntu1_ppc64el.deb ... 194s Unpacking build-essential (12.10ubuntu1) ... 194s Selecting previously unselected package dctrl-tools. 194s Preparing to unpack .../033-dctrl-tools_2.24-3build2_ppc64el.deb ... 194s Unpacking dctrl-tools (2.24-3build2) ... 194s Selecting previously unselected package fonts-dejavu-mono. 194s Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... 194s Unpacking fonts-dejavu-mono (2.37-8) ... 194s Selecting previously unselected package fonts-dejavu-core. 194s Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... 194s Unpacking fonts-dejavu-core (2.37-8) ... 194s Selecting previously unselected package fontconfig-config. 194s Preparing to unpack .../036-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 194s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 194s Selecting previously unselected package libfontconfig1:ppc64el. 194s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 194s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 194s Selecting previously unselected package fontconfig. 194s Preparing to unpack .../038-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 194s Unpacking fontconfig (2.15.0-1ubuntu1) ... 194s Selecting previously unselected package fonts-font-awesome. 194s Preparing to unpack .../039-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 194s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 194s Selecting previously unselected package fonts-glyphicons-halflings. 194s Preparing to unpack .../040-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 195s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 195s Selecting previously unselected package fonts-lmodern. 195s Preparing to unpack .../041-fonts-lmodern_2.005-1_all.deb ... 195s Unpacking fonts-lmodern (2.005-1) ... 195s Selecting previously unselected package fonts-mathjax. 195s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 195s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 195s Selecting previously unselected package libgfortran5:ppc64el. 195s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 195s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 195s Selecting previously unselected package libgfortran-13-dev:ppc64el. 195s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 195s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 195s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 195s Preparing to unpack .../045-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 195s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 195s Selecting previously unselected package gfortran-13. 195s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 195s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 195s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 195s Preparing to unpack .../047-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 195s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 195s Selecting previously unselected package gfortran. 195s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 195s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 195s Selecting previously unselected package icu-devtools. 195s Preparing to unpack .../049-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 195s Unpacking icu-devtools (74.2-1ubuntu1) ... 195s Selecting previously unselected package javascript-common. 195s Preparing to unpack .../050-javascript-common_11+nmu1_all.deb ... 195s Unpacking javascript-common (11+nmu1) ... 195s Selecting previously unselected package libio-string-perl. 195s Preparing to unpack .../051-libio-string-perl_1.08-4_all.deb ... 195s Unpacking libio-string-perl (1.08-4) ... 195s Selecting previously unselected package liblatex-tounicode-perl. 195s Preparing to unpack .../052-liblatex-tounicode-perl_0.54-2_all.deb ... 195s Unpacking liblatex-tounicode-perl (0.54-2) ... 195s Selecting previously unselected package libbibtex-parser-perl. 195s Preparing to unpack .../053-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 195s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 195s Selecting previously unselected package libblas3:ppc64el. 195s Preparing to unpack .../054-libblas3_3.12.0-3_ppc64el.deb ... 195s Unpacking libblas3:ppc64el (3.12.0-3) ... 195s Selecting previously unselected package libblas-dev:ppc64el. 195s Preparing to unpack .../055-libblas-dev_3.12.0-3_ppc64el.deb ... 195s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 195s Selecting previously unselected package libboost1.83-dev:ppc64el. 195s Preparing to unpack .../056-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 195s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 198s Selecting previously unselected package libboost-dev:ppc64el. 198s Preparing to unpack .../057-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 198s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 198s Selecting previously unselected package libbz2-dev:ppc64el. 198s Preparing to unpack .../058-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 198s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 198s Selecting previously unselected package libpixman-1-0:ppc64el. 198s Preparing to unpack .../059-libpixman-1-0_0.42.2-1_ppc64el.deb ... 198s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 198s Selecting previously unselected package libxcb-render0:ppc64el. 198s Preparing to unpack .../060-libxcb-render0_1.15-1_ppc64el.deb ... 198s Unpacking libxcb-render0:ppc64el (1.15-1) ... 198s Selecting previously unselected package libxcb-shm0:ppc64el. 198s Preparing to unpack .../061-libxcb-shm0_1.15-1_ppc64el.deb ... 198s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 198s Selecting previously unselected package libxrender1:ppc64el. 198s Preparing to unpack .../062-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 198s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 198s Selecting previously unselected package libcairo2:ppc64el. 198s Preparing to unpack .../063-libcairo2_1.18.0-1_ppc64el.deb ... 198s Unpacking libcairo2:ppc64el (1.18.0-1) ... 198s Selecting previously unselected package libdatrie1:ppc64el. 198s Preparing to unpack .../064-libdatrie1_0.2.13-3_ppc64el.deb ... 198s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 198s Selecting previously unselected package libdeflate0:ppc64el. 199s Preparing to unpack .../065-libdeflate0_1.19-1_ppc64el.deb ... 199s Unpacking libdeflate0:ppc64el (1.19-1) ... 199s Selecting previously unselected package libgraphite2-3:ppc64el. 199s Preparing to unpack .../066-libgraphite2-3_1.3.14-2_ppc64el.deb ... 199s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 199s Selecting previously unselected package libharfbuzz0b:ppc64el. 199s Preparing to unpack .../067-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 199s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 199s Selecting previously unselected package x11-common. 199s Preparing to unpack .../068-x11-common_1%3a7.7+23ubuntu2_all.deb ... 199s Unpacking x11-common (1:7.7+23ubuntu2) ... 199s Selecting previously unselected package libice6:ppc64el. 199s Preparing to unpack .../069-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 199s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 199s Selecting previously unselected package libicu-dev:ppc64el. 199s Preparing to unpack .../070-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 199s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 199s Selecting previously unselected package libjpeg-turbo8:ppc64el. 199s Preparing to unpack .../071-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 199s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 199s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 199s Preparing to unpack .../072-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 199s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 199s Selecting previously unselected package libjpeg8:ppc64el. 199s Preparing to unpack .../073-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 199s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 199s Selecting previously unselected package libjpeg8-dev:ppc64el. 199s Preparing to unpack .../074-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 199s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 199s Selecting previously unselected package libjpeg-dev:ppc64el. 199s Preparing to unpack .../075-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 199s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 199s Selecting previously unselected package libjs-bootstrap. 199s Preparing to unpack .../076-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 199s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 199s Selecting previously unselected package libjs-popper.js. 199s Preparing to unpack .../077-libjs-popper.js_1.16.1+ds-6_all.deb ... 199s Unpacking libjs-popper.js (1.16.1+ds-6) ... 199s Selecting previously unselected package libjs-bootstrap4. 199s Preparing to unpack .../078-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 199s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 199s Selecting previously unselected package libjs-d3. 199s Preparing to unpack .../079-libjs-d3_3.5.17-4_all.deb ... 199s Unpacking libjs-d3 (3.5.17-4) ... 199s Selecting previously unselected package libjs-es5-shim. 199s Preparing to unpack .../080-libjs-es5-shim_4.6.7-2_all.deb ... 199s Unpacking libjs-es5-shim (4.6.7-2) ... 199s Selecting previously unselected package libjs-highlight.js. 199s Preparing to unpack .../081-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 199s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 199s Selecting previously unselected package libjs-jquery. 199s Preparing to unpack .../082-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 199s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 199s Selecting previously unselected package libjs-jquery-datatables. 199s Preparing to unpack .../083-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 199s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 199s Selecting previously unselected package libjs-sifter.js. 199s Preparing to unpack .../084-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 199s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 199s Selecting previously unselected package libjs-microplugin.js. 199s Preparing to unpack .../085-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 199s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 199s Selecting previously unselected package libjs-jquery-selectize.js. 199s Preparing to unpack .../086-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 199s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 199s Selecting previously unselected package libjs-jquery-ui. 199s Preparing to unpack .../087-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 199s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 199s Selecting previously unselected package libjs-json. 199s Preparing to unpack .../088-libjs-json_0~20221030+~1.0.8-1_all.deb ... 199s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 200s Selecting previously unselected package libjs-lunr. 200s Preparing to unpack .../089-libjs-lunr_2.3.9~dfsg-2_all.deb ... 200s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 200s Selecting previously unselected package libjs-prettify. 200s Preparing to unpack .../090-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 200s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 200s Selecting previously unselected package libkpathsea6:ppc64el. 200s Preparing to unpack .../091-libkpathsea6_2023.20230311.66589-9_ppc64el.deb ... 200s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9) ... 200s Selecting previously unselected package liblapack3:ppc64el. 200s Preparing to unpack .../092-liblapack3_3.12.0-3_ppc64el.deb ... 200s Unpacking liblapack3:ppc64el (3.12.0-3) ... 200s Selecting previously unselected package liblapack-dev:ppc64el. 200s Preparing to unpack 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.../098-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 200s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 200s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 200s Preparing to unpack .../099-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 200s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 200s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 200s Preparing to unpack .../100-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 200s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 200s Selecting previously unselected package libpaper1:ppc64el. 200s Preparing to unpack .../101-libpaper1_1.1.29_ppc64el.deb ... 200s Unpacking libpaper1:ppc64el (1.1.29) ... 200s Selecting previously unselected package libpaper-utils. 200s Preparing to unpack .../102-libpaper-utils_1.1.29_ppc64el.deb ... 200s Unpacking libpaper-utils (1.1.29) ... 200s Selecting previously unselected package libpcre2-16-0:ppc64el. 200s Preparing to unpack .../103-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 200s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 200s Selecting previously unselected package libpcre2-32-0:ppc64el. 200s Preparing to unpack .../104-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 200s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 200s Selecting previously unselected package libpcre2-posix3:ppc64el. 200s Preparing to unpack .../105-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 200s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 200s Selecting previously unselected package libpcre2-dev:ppc64el. 200s Preparing to unpack .../106-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 200s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 200s Selecting previously unselected package libpkgconf3:ppc64el. 200s Preparing to unpack .../107-libpkgconf3_1.8.1-2_ppc64el.deb ... 200s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 200s Selecting previously unselected package zlib1g-dev:ppc64el. 200s Preparing to unpack .../108-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 200s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 200s Selecting previously unselected package libpng-dev:ppc64el. 200s Preparing to unpack .../109-libpng-dev_1.6.43-1_ppc64el.deb ... 200s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 200s Selecting previously unselected package libpotrace0:ppc64el. 200s Preparing to unpack .../110-libpotrace0_1.16-2_ppc64el.deb ... 200s Unpacking libpotrace0:ppc64el (1.16-2) ... 200s Selecting previously unselected package libptexenc1:ppc64el. 200s Preparing to unpack .../111-libptexenc1_2023.20230311.66589-9_ppc64el.deb ... 200s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9) ... 200s Selecting previously unselected package libreadline-dev:ppc64el. 200s Preparing to unpack .../112-libreadline-dev_8.2-3_ppc64el.deb ... 200s Unpacking libreadline-dev:ppc64el (8.2-3) ... 200s Selecting previously unselected package libsharpyuv0:ppc64el. 200s Preparing to unpack .../113-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 200s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 200s Selecting previously unselected package libsm6:ppc64el. 200s Preparing to unpack .../114-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 200s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 200s Selecting previously unselected package libsynctex2:ppc64el. 200s Preparing to unpack .../115-libsynctex2_2023.20230311.66589-9_ppc64el.deb ... 200s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9) ... 200s Selecting previously unselected package libtcl8.6:ppc64el. 200s Preparing to unpack .../116-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 200s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 200s Selecting previously unselected package libteckit0:ppc64el. 200s Preparing to unpack .../117-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 200s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 200s Selecting previously unselected package libtexlua53-5:ppc64el. 200s Preparing to unpack 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.../123-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 200s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 200s Selecting previously unselected package libtk8.6:ppc64el. 200s Preparing to unpack .../124-libtk8.6_8.6.13-2_ppc64el.deb ... 200s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 201s Selecting previously unselected package libxt6:ppc64el. 201s Preparing to unpack .../125-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 201s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 201s Selecting previously unselected package libxmu6:ppc64el. 201s Preparing to unpack .../126-libxmu6_2%3a1.1.3-3_ppc64el.deb ... 201s Unpacking libxmu6:ppc64el (2:1.1.3-3) ... 201s Selecting previously unselected package libxpm4:ppc64el. 201s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 201s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 201s Selecting previously unselected package libxaw7:ppc64el. 201s Preparing to unpack .../128-libxaw7_2%3a1.0.14-1_ppc64el.deb ... 201s Unpacking libxaw7:ppc64el (2:1.0.14-1) ... 201s Selecting previously unselected package libxi6:ppc64el. 201s Preparing to unpack .../129-libxi6_2%3a1.8.1-1_ppc64el.deb ... 201s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 201s Selecting previously unselected package libzzip-0-13:ppc64el. 201s Preparing to unpack .../130-libzzip-0-13_0.13.72+dfsg.1-1.1_ppc64el.deb ... 201s Unpacking libzzip-0-13:ppc64el (0.13.72+dfsg.1-1.1) ... 201s Selecting previously unselected package zip. 201s Preparing to unpack .../131-zip_3.0-13_ppc64el.deb ... 201s Unpacking zip (3.0-13) ... 201s Selecting previously unselected package unzip. 201s Preparing to unpack .../132-unzip_6.0-28ubuntu3_ppc64el.deb ... 201s Unpacking unzip (6.0-28ubuntu3) ... 201s Selecting previously unselected package xdg-utils. 201s Preparing to unpack .../133-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 201s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 201s Selecting previously unselected package r-base-core. 201s Preparing to unpack .../134-r-base-core_4.3.2-1build1_ppc64el.deb ... 201s Unpacking r-base-core (4.3.2-1build1) ... 201s Selecting previously unselected package r-cran-littler. 201s Preparing to unpack .../135-r-cran-littler_0.3.19-1_ppc64el.deb ... 201s Unpacking r-cran-littler (0.3.19-1) ... 201s Selecting previously unselected package littler. 201s Preparing to unpack .../136-littler_0.3.19-1_all.deb ... 201s Unpacking littler (0.3.19-1) ... 201s Selecting previously unselected package node-bootstrap-sass. 201s Preparing to unpack .../137-node-bootstrap-sass_3.4.3-2_all.deb ... 201s Unpacking node-bootstrap-sass (3.4.3-2) ... 201s Selecting previously unselected package node-html5shiv. 201s Preparing to unpack .../138-node-html5shiv_3.7.3+dfsg-5_all.deb ... 201s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 201s Selecting previously unselected package node-normalize.css. 201s Preparing to unpack .../139-node-normalize.css_8.0.1-5_all.deb ... 201s Unpacking node-normalize.css (8.0.1-5) ... 201s Selecting previously unselected package pandoc-data. 201s Preparing to unpack .../140-pandoc-data_3.1.3-1_all.deb ... 201s Unpacking pandoc-data (3.1.3-1) ... 201s Selecting previously unselected package pandoc. 201s Preparing to unpack .../141-pandoc_3.1.3+ds-2_ppc64el.deb ... 201s Unpacking pandoc (3.1.3+ds-2) ... 202s Selecting previously unselected package pkgconf-bin. 202s Preparing to unpack .../142-pkgconf-bin_1.8.1-2_ppc64el.deb ... 202s Unpacking pkgconf-bin (1.8.1-2) ... 203s Selecting previously unselected package pkgconf:ppc64el. 203s Preparing to unpack .../143-pkgconf_1.8.1-2_ppc64el.deb ... 203s Unpacking pkgconf:ppc64el (1.8.1-2) ... 203s Selecting previously unselected package pkg-config:ppc64el. 203s Preparing to unpack .../144-pkg-config_1.8.1-2_ppc64el.deb ... 203s Unpacking pkg-config:ppc64el (1.8.1-2) ... 203s Selecting previously unselected package liblzma-dev:ppc64el. 203s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 203s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 203s Selecting previously unselected package r-base-dev. 203s Preparing to unpack .../146-r-base-dev_4.3.2-1build1_all.deb ... 203s Unpacking r-base-dev (4.3.2-1build1) ... 203s Selecting previously unselected package pkg-r-autopkgtest. 203s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 203s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 203s Selecting previously unselected package r-bioc-biocgenerics. 203s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 203s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 203s Selecting previously unselected package r-bioc-biobase. 203s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 203s Unpacking r-bioc-biobase (2.62.0-1) ... 203s Selecting previously unselected package r-bioc-s4vectors. 203s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 203s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 203s Selecting previously unselected package r-bioc-iranges. 203s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 203s Unpacking r-bioc-iranges (2.36.0-1) ... 203s Selecting previously unselected package r-cran-dbi. 203s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 203s Unpacking r-cran-dbi (1.2.2-1) ... 203s Selecting previously unselected package r-cran-bit. 203s Preparing to unpack .../153-r-cran-bit_4.0.5-1_ppc64el.deb ... 203s Unpacking r-cran-bit (4.0.5-1) ... 203s Selecting previously unselected package r-cran-bit64. 203s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_ppc64el.deb ... 203s Unpacking r-cran-bit64 (4.0.5-1) ... 203s Selecting previously unselected package r-cran-rlang. 203s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_ppc64el.deb ... 203s Unpacking r-cran-rlang (1.1.3-1) ... 203s Selecting previously unselected package r-cran-cli. 203s Preparing to unpack .../156-r-cran-cli_3.6.2-1_ppc64el.deb ... 203s Unpacking r-cran-cli (3.6.2-1) ... 203s Selecting previously unselected package r-cran-glue. 203s Preparing to unpack .../157-r-cran-glue_1.7.0-1_ppc64el.deb ... 203s Unpacking r-cran-glue (1.7.0-1) ... 203s Selecting previously unselected package r-cran-lifecycle. 203s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 203s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 203s Selecting previously unselected package r-cran-vctrs. 203s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 203s Unpacking r-cran-vctrs (0.6.5-1) ... 203s Selecting previously unselected package r-cran-blob. 203s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 203s Unpacking r-cran-blob (1.2.4-1) ... 203s Selecting previously unselected package r-cran-fastmap. 203s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 203s Unpacking r-cran-fastmap (1.1.1-1) ... 203s Selecting previously unselected package r-cran-cachem. 203s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_ppc64el.deb ... 203s Unpacking r-cran-cachem (1.0.8-1) ... 203s Selecting previously unselected package r-cran-memoise. 203s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 203s Unpacking r-cran-memoise (2.0.1-1) ... 203s Selecting previously unselected package r-cran-pkgconfig. 203s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 203s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 203s Selecting previously unselected package r-cran-plogr. 203s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 203s Unpacking r-cran-plogr (0.2.0-3build1) ... 203s Selecting previously unselected package r-cran-cpp11. 203s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 203s Unpacking r-cran-cpp11 (0.4.7-1) ... 203s Selecting previously unselected package r-cran-rsqlite. 203s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 203s Unpacking r-cran-rsqlite (2.3.4-1) ... 203s Selecting previously unselected package r-cran-curl. 203s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 203s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 203s Selecting previously unselected package r-cran-jsonlite. 203s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 203s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 203s Selecting previously unselected package r-cran-mime. 203s Preparing to unpack .../170-r-cran-mime_0.12-1_ppc64el.deb ... 203s Unpacking r-cran-mime (0.12-1) ... 203s Selecting previously unselected package r-cran-sys. 203s Preparing to unpack .../171-r-cran-sys_3.4.2-1_ppc64el.deb ... 203s Unpacking r-cran-sys (3.4.2-1) ... 203s Selecting previously unselected package r-cran-askpass. 203s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_ppc64el.deb ... 203s Unpacking r-cran-askpass (1.2.0-1) ... 203s Selecting previously unselected package r-cran-openssl. 203s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 203s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 203s Selecting previously unselected package r-cran-r6. 203s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 203s Unpacking r-cran-r6 (2.5.1-1) ... 203s Selecting previously unselected package r-cran-httr. 203s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 203s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 203s Selecting previously unselected package r-cran-png. 203s Preparing to unpack .../176-r-cran-png_0.1-8-1_ppc64el.deb ... 203s Unpacking r-cran-png (0.1-8-1) ... 203s Selecting previously unselected package r-bioc-zlibbioc. 203s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 203s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 203s Selecting previously unselected package r-bioc-xvector. 203s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 203s Unpacking r-bioc-xvector (0.42.0-1) ... 203s Selecting previously unselected package r-cran-bitops. 203s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_ppc64el.deb ... 203s Unpacking r-cran-bitops (1.0-7-1) ... 203s Selecting previously unselected package r-cran-rcurl. 204s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 204s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 204s Selecting previously unselected package r-bioc-genomeinfodbdata. 204s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 204s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 204s Selecting previously unselected package r-bioc-genomeinfodb. 204s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 204s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 204s Selecting previously unselected package r-cran-crayon. 204s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 204s Unpacking r-cran-crayon (1.5.2-1) ... 204s Selecting previously unselected package r-bioc-biostrings. 204s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 204s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 204s Selecting previously unselected package r-bioc-keggrest. 204s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 204s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 204s Selecting previously unselected package r-bioc-annotationdbi. 204s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 204s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 204s Selecting previously unselected package r-cran-r.methodss3. 204s Preparing to unpack .../187-r-cran-r.methodss3_1.8.2-1_all.deb ... 204s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 204s Selecting previously unselected package r-cran-r.oo. 204s Preparing to unpack .../188-r-cran-r.oo_1.26.0-1_all.deb ... 204s Unpacking r-cran-r.oo (1.26.0-1) ... 204s Selecting previously unselected package r-cran-r.utils. 204s Preparing to unpack .../189-r-cran-r.utils_2.12.3-1_all.deb ... 204s Unpacking r-cran-r.utils (2.12.3-1) ... 204s Selecting previously unselected package r-cran-matrixstats. 204s Preparing to unpack .../190-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 204s Unpacking r-cran-matrixstats (1.2.0-1) ... 204s Selecting previously unselected package r-bioc-aroma.light. 204s Preparing to unpack .../191-r-bioc-aroma.light_3.32.0-1_all.deb ... 204s Unpacking r-bioc-aroma.light (3.32.0-1) ... 204s Selecting previously unselected package r-cran-generics. 204s Preparing to unpack .../192-r-cran-generics_0.1.3-1_all.deb ... 204s Unpacking r-cran-generics (0.1.3-1) ... 204s Selecting previously unselected package r-cran-magrittr. 204s Preparing to unpack .../193-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 204s Unpacking r-cran-magrittr (2.0.3-1) ... 204s Selecting previously unselected package r-cran-fansi. 204s Preparing to unpack .../194-r-cran-fansi_1.0.5-1_ppc64el.deb ... 204s Unpacking r-cran-fansi (1.0.5-1) ... 204s Selecting previously unselected package r-cran-utf8. 204s Preparing to unpack .../195-r-cran-utf8_1.2.4-1_ppc64el.deb ... 204s Unpacking r-cran-utf8 (1.2.4-1) ... 204s Selecting previously unselected package r-cran-pillar. 204s Preparing to unpack .../196-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 204s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 204s Selecting previously unselected package r-cran-tibble. 204s Preparing to unpack .../197-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 204s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 204s Selecting previously unselected package r-cran-withr. 204s Preparing to unpack .../198-r-cran-withr_2.5.0-1_all.deb ... 204s Unpacking r-cran-withr (2.5.0-1) ... 204s Selecting previously unselected package r-cran-tidyselect. 204s Preparing to unpack .../199-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 204s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 204s Selecting previously unselected package r-cran-dplyr. 204s Preparing to unpack .../200-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 204s Unpacking r-cran-dplyr (1.1.4-1) ... 204s Selecting previously unselected package r-cran-purrr. 204s Preparing to unpack .../201-r-cran-purrr_1.0.2-1_ppc64el.deb ... 204s Unpacking r-cran-purrr (1.0.2-1) ... 204s Selecting previously unselected package r-cran-stringi. 204s Preparing to unpack .../202-r-cran-stringi_1.8.3-1_ppc64el.deb ... 204s Unpacking r-cran-stringi (1.8.3-1) ... 204s Selecting previously unselected package r-cran-stringr. 204s Preparing to unpack .../203-r-cran-stringr_1.5.1-1_all.deb ... 204s Unpacking r-cran-stringr (1.5.1-1) ... 204s Selecting previously unselected package r-cran-tidyr. 204s Preparing to unpack .../204-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 204s Unpacking r-cran-tidyr (1.3.1-1) ... 205s Selecting previously unselected package r-cran-dbplyr. 205s Preparing to unpack .../205-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 205s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 205s Selecting previously unselected package r-cran-filelock. 205s Preparing to unpack .../206-r-cran-filelock_1.0.3-1_ppc64el.deb ... 205s Unpacking r-cran-filelock (1.0.3-1) ... 205s Selecting previously unselected package r-bioc-biocfilecache. 205s Preparing to unpack .../207-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 205s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 205s Selecting previously unselected package r-bioc-biocio. 205s Preparing to unpack .../208-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 205s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 205s Selecting previously unselected package r-cran-formatr. 205s Preparing to unpack .../209-r-cran-formatr_1.14-1_all.deb ... 205s Unpacking r-cran-formatr (1.14-1) ... 205s Selecting previously unselected package r-cran-lambda.r. 205s Preparing to unpack .../210-r-cran-lambda.r_1.2.4-2build1_all.deb ... 205s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 205s Selecting previously unselected package r-cran-futile.options. 205s Preparing to unpack .../211-r-cran-futile.options_1.0.1-3build1_all.deb ... 205s Unpacking r-cran-futile.options (1.0.1-3build1) ... 205s Selecting previously unselected package r-cran-futile.logger. 205s Preparing to unpack .../212-r-cran-futile.logger_1.4.3-4build1_all.deb ... 205s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 205s Selecting previously unselected package r-cran-snow. 205s Preparing to unpack .../213-r-cran-snow_1%3a0.4.4-2_all.deb ... 205s Unpacking r-cran-snow (1:0.4.4-2) ... 205s Selecting previously unselected package r-cran-codetools. 205s Preparing to unpack .../214-r-cran-codetools_0.2-19-1_all.deb ... 205s Unpacking r-cran-codetools (0.2-19-1) ... 205s Selecting previously unselected package r-cran-bh. 205s Preparing to unpack .../215-r-cran-bh_1.84.0-1_all.deb ... 205s Unpacking r-cran-bh (1.84.0-1) ... 205s Selecting previously unselected package r-bioc-biocparallel. 205s Preparing to unpack .../216-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 205s Unpacking r-bioc-biocparallel (1.36.0-1) ... 205s Selecting previously unselected package r-cran-base64enc. 205s Preparing to unpack .../217-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 205s Unpacking r-cran-base64enc (0.1-3-3) ... 205s Selecting previously unselected package r-cran-digest. 205s Preparing to unpack .../218-r-cran-digest_0.6.34-1_ppc64el.deb ... 205s Unpacking r-cran-digest (0.6.34-1) ... 205s Selecting previously unselected package r-cran-ellipsis. 205s Preparing to unpack .../219-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 205s Unpacking r-cran-ellipsis (0.3.2-2) ... 205s Selecting previously unselected package r-cran-htmltools. 205s Preparing to unpack .../220-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 205s Unpacking r-cran-htmltools (0.5.7-1) ... 205s Selecting previously unselected package r-cran-evaluate. 205s Preparing to unpack .../221-r-cran-evaluate_0.23-1_all.deb ... 205s Unpacking r-cran-evaluate (0.23-1) ... 205s Selecting previously unselected package r-cran-xfun. 205s Preparing to unpack .../222-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 205s Unpacking r-cran-xfun (0.41+dfsg-1) ... 205s Selecting previously unselected package r-cran-highr. 205s Preparing to unpack .../223-r-cran-highr_0.10+dfsg-1_all.deb ... 205s Unpacking r-cran-highr (0.10+dfsg-1) ... 205s Selecting previously unselected package r-cran-yaml. 205s Preparing to unpack .../224-r-cran-yaml_2.3.8-1_ppc64el.deb ... 205s Unpacking r-cran-yaml (2.3.8-1) ... 205s Selecting previously unselected package libjs-mathjax. 205s Preparing to unpack .../225-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 205s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 206s Selecting previously unselected package r-cran-knitr. 206s Preparing to unpack .../226-r-cran-knitr_1.45+dfsg-1_all.deb ... 206s Unpacking r-cran-knitr (1.45+dfsg-1) ... 206s Selecting previously unselected package r-cran-jquerylib. 206s Preparing to unpack .../227-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 206s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 206s Selecting previously unselected package r-cran-fs. 206s Preparing to unpack .../228-r-cran-fs_1.6.3+dfsg-1_ppc64el.deb ... 206s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 206s Selecting previously unselected package r-cran-rappdirs. 206s Preparing to unpack .../229-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 206s Unpacking r-cran-rappdirs (0.3.3-1) ... 206s Selecting previously unselected package r-cran-sass. 206s Preparing to unpack .../230-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 206s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 206s Selecting previously unselected package r-cran-bslib. 206s Preparing to unpack .../231-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 206s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 206s Selecting previously unselected package r-cran-fontawesome. 206s Preparing to unpack .../232-r-cran-fontawesome_0.5.2-1_all.deb ... 206s Unpacking r-cran-fontawesome (0.5.2-1) ... 207s Selecting previously unselected package r-cran-tinytex. 207s Preparing to unpack .../233-r-cran-tinytex_0.49-1_all.deb ... 207s Unpacking r-cran-tinytex (0.49-1) ... 207s Selecting previously unselected package libjs-modernizr. 207s Preparing to unpack .../234-libjs-modernizr_2.6.2+ds1-5_all.deb ... 207s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 207s Selecting previously unselected package r-cran-pkgkitten. 207s Preparing to unpack .../235-r-cran-pkgkitten_0.2.3-1_all.deb ... 207s Unpacking r-cran-pkgkitten (0.2.3-1) ... 207s Selecting previously unselected package r-cran-rcpp. 207s Preparing to unpack .../236-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 207s Unpacking r-cran-rcpp (1.0.12-1) ... 207s Selecting previously unselected package r-cran-later. 207s Preparing to unpack .../237-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 207s Unpacking r-cran-later (1.3.2+dfsg-1) ... 207s Selecting previously unselected package r-cran-promises. 207s Preparing to unpack .../238-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 207s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 207s Selecting previously unselected package r-cran-httpuv. 207s Preparing to unpack .../239-r-cran-httpuv_1.6.14+dfsg-1_ppc64el.deb ... 207s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 207s Selecting previously unselected package r-cran-xtable. 207s Preparing to unpack .../240-r-cran-xtable_1%3a1.8-4-2_all.deb ... 207s Unpacking r-cran-xtable (1:1.8-4-2) ... 207s Selecting previously unselected package r-cran-sourcetools. 207s Preparing to unpack .../241-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 207s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 207s Selecting previously unselected package r-cran-commonmark. 207s Preparing to unpack .../242-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 207s Unpacking r-cran-commonmark (1.9.1-1) ... 207s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 207s Preparing to unpack .../243-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 207s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 207s Selecting previously unselected package r-cran-shiny. 207s Preparing to unpack .../244-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 207s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 207s Selecting previously unselected package r-cran-rmarkdown. 207s Preparing to unpack .../245-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 207s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 207s Selecting previously unselected package r-cran-bookdown. 207s Preparing to unpack .../246-r-cran-bookdown_0.37+dfsg-1_all.deb ... 207s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 207s Selecting previously unselected package r-cran-biocmanager. 207s Preparing to unpack .../247-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 207s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 207s Selecting previously unselected package tex-common. 207s Preparing to unpack .../248-tex-common_6.18_all.deb ... 207s Unpacking tex-common (6.18) ... 207s Selecting previously unselected package t1utils. 207s Preparing to unpack .../249-t1utils_1.41-4build2_ppc64el.deb ... 207s Unpacking t1utils (1.41-4build2) ... 207s Selecting previously unselected package texlive-binaries. 207s Preparing to unpack .../250-texlive-binaries_2023.20230311.66589-9_ppc64el.deb ... 207s Unpacking texlive-binaries (2023.20230311.66589-9) ... 208s Selecting previously unselected package texlive-base. 208s Preparing to unpack .../251-texlive-base_2023.20240207-1_all.deb ... 208s Unpacking texlive-base (2023.20240207-1) ... 210s Selecting previously unselected package texlive-latex-base. 210s Preparing to unpack .../252-texlive-latex-base_2023.20240207-1_all.deb ... 210s Unpacking texlive-latex-base (2023.20240207-1) ... 210s Selecting previously unselected package texlive-bibtex-extra. 210s Preparing to unpack .../253-texlive-bibtex-extra_2023.20240207-1_all.deb ... 210s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 216s Selecting previously unselected package r-bioc-biocstyle. 216s Preparing to unpack .../254-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 216s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 216s Selecting previously unselected package r-cran-xml. 216s Preparing to unpack .../255-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 216s Unpacking r-cran-xml (3.99-0.16.1-1) ... 216s Selecting previously unselected package r-cran-hms. 216s Preparing to unpack .../256-r-cran-hms_1.1.3-1_all.deb ... 216s Unpacking r-cran-hms (1.1.3-1) ... 216s Selecting previously unselected package r-cran-prettyunits. 216s Preparing to unpack .../257-r-cran-prettyunits_1.2.0-1_all.deb ... 216s Unpacking r-cran-prettyunits (1.2.0-1) ... 216s Selecting previously unselected package r-cran-progress. 216s Preparing to unpack .../258-r-cran-progress_1.2.3-1_all.deb ... 216s Unpacking r-cran-progress (1.2.3-1) ... 216s Selecting previously unselected package r-cran-xml2. 216s Preparing to unpack .../259-r-cran-xml2_1.3.6-1_ppc64el.deb ... 216s Unpacking r-cran-xml2 (1.3.6-1) ... 216s Selecting previously unselected package r-bioc-biomart. 216s Preparing to unpack .../260-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 216s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 216s Selecting previously unselected package r-cran-lattice. 216s Preparing to unpack .../261-r-cran-lattice_0.22-5-1_ppc64el.deb ... 216s Unpacking r-cran-lattice (0.22-5-1) ... 216s Selecting previously unselected package r-cran-matrix. 216s Preparing to unpack .../262-r-cran-matrix_1.6-5-1_ppc64el.deb ... 216s Unpacking r-cran-matrix (1.6-5-1) ... 216s Selecting previously unselected package r-bioc-matrixgenerics. 216s Preparing to unpack .../263-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 216s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 216s Selecting previously unselected package r-cran-abind. 216s Preparing to unpack .../264-r-cran-abind_1.4-5-2_all.deb ... 216s Unpacking r-cran-abind (1.4-5-2) ... 216s Selecting previously unselected package r-bioc-s4arrays. 216s Preparing to unpack .../265-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 216s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 216s Selecting previously unselected package r-bioc-sparsearray. 216s Preparing to unpack .../266-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 216s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 216s Selecting previously unselected package r-bioc-delayedarray. 216s Preparing to unpack .../267-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 216s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 216s Selecting previously unselected package r-bioc-genomicranges. 216s Preparing to unpack .../268-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 216s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 216s Selecting previously unselected package r-bioc-summarizedexperiment. 216s Preparing to unpack .../269-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 216s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 216s Selecting previously unselected package r-cran-locfit. 216s Preparing to unpack .../270-r-cran-locfit_1.5-9.8-1_ppc64el.deb ... 216s Unpacking r-cran-locfit (1.5-9.8-1) ... 217s Selecting previously unselected package r-cran-gtable. 217s Preparing to unpack .../271-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 217s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 217s Selecting previously unselected package r-cran-isoband. 217s Preparing to unpack .../272-r-cran-isoband_0.2.7-1_ppc64el.deb ... 217s Unpacking r-cran-isoband (0.2.7-1) ... 217s Selecting previously unselected package r-cran-mass. 217s Preparing to unpack .../273-r-cran-mass_7.3-60.0.1-1_ppc64el.deb ... 217s Unpacking r-cran-mass (7.3-60.0.1-1) ... 217s Selecting previously unselected package r-cran-nlme. 217s Preparing to unpack .../274-r-cran-nlme_3.1.164-1_ppc64el.deb ... 217s Unpacking r-cran-nlme (3.1.164-1) ... 217s Selecting previously unselected package r-cran-mgcv. 217s Preparing to unpack .../275-r-cran-mgcv_1.9-1-1_ppc64el.deb ... 217s Unpacking r-cran-mgcv (1.9-1-1) ... 217s Selecting previously unselected package r-cran-farver. 217s Preparing to unpack .../276-r-cran-farver_2.1.1-1_ppc64el.deb ... 217s Unpacking r-cran-farver (2.1.1-1) ... 217s Selecting previously unselected package r-cran-labeling. 217s Preparing to unpack .../277-r-cran-labeling_0.4.3-1_all.deb ... 217s Unpacking r-cran-labeling (0.4.3-1) ... 217s Selecting previously unselected package r-cran-colorspace. 217s Preparing to unpack .../278-r-cran-colorspace_2.1-0+dfsg-1_ppc64el.deb ... 217s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 217s Selecting previously unselected package r-cran-munsell. 217s Preparing to unpack .../279-r-cran-munsell_0.5.0-2build1_all.deb ... 217s Unpacking r-cran-munsell (0.5.0-2build1) ... 217s Selecting previously unselected package r-cran-rcolorbrewer. 217s Preparing to unpack .../280-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 217s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 217s Selecting previously unselected package r-cran-viridislite. 217s Preparing to unpack .../281-r-cran-viridislite_0.4.2-2_all.deb ... 217s Unpacking r-cran-viridislite (0.4.2-2) ... 217s Selecting previously unselected package r-cran-scales. 217s Preparing to unpack .../282-r-cran-scales_1.3.0-1_all.deb ... 217s Unpacking r-cran-scales (1.3.0-1) ... 217s Selecting previously unselected package r-cran-ggplot2. 217s Preparing to unpack .../283-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 217s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 217s Selecting previously unselected package r-cran-rcpparmadillo. 217s Preparing to unpack .../284-r-cran-rcpparmadillo_0.12.8.0.0-1_ppc64el.deb ... 217s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 217s Selecting previously unselected package r-bioc-deseq2. 217s Preparing to unpack .../285-r-bioc-deseq2_1.42.0+dfsg-1_ppc64el.deb ... 217s Unpacking r-bioc-deseq2 (1.42.0+dfsg-1) ... 217s Selecting previously unselected package r-bioc-rhtslib. 217s Preparing to unpack .../286-r-bioc-rhtslib_2.4.1+dfsg-1_ppc64el.deb ... 217s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 217s Selecting previously unselected package r-bioc-rsamtools. 217s Preparing to unpack .../287-r-bioc-rsamtools_2.18.0+dfsg-1_ppc64el.deb ... 217s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 217s Selecting previously unselected package r-bioc-genomicalignments. 217s Preparing to unpack .../288-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 217s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 217s Selecting previously unselected package r-cran-hwriter. 217s Preparing to unpack .../289-r-cran-hwriter_1.3.2.1-1_all.deb ... 217s Unpacking r-cran-hwriter (1.3.2.1-1) ... 217s Selecting previously unselected package r-cran-jpeg. 217s Preparing to unpack .../290-r-cran-jpeg_0.1-10-1_ppc64el.deb ... 217s Unpacking r-cran-jpeg (0.1-10-1) ... 217s Selecting previously unselected package r-cran-deldir. 217s Preparing to unpack .../291-r-cran-deldir_2.0-4-1_ppc64el.deb ... 217s Unpacking r-cran-deldir (2.0-4-1) ... 217s Selecting previously unselected package r-cran-rcppeigen. 217s Preparing to unpack .../292-r-cran-rcppeigen_0.3.3.9.4-1_ppc64el.deb ... 217s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 218s Selecting previously unselected package r-cran-interp. 218s Preparing to unpack .../293-r-cran-interp_1.1-6-1_ppc64el.deb ... 218s Unpacking r-cran-interp (1.1-6-1) ... 218s Selecting previously unselected package r-cran-latticeextra. 218s Preparing to unpack .../294-r-cran-latticeextra_0.6-30-1_all.deb ... 218s Unpacking r-cran-latticeextra (0.6-30-1) ... 218s Selecting previously unselected package r-bioc-shortread. 218s Preparing to unpack .../295-r-bioc-shortread_1.60.0-2_ppc64el.deb ... 218s Unpacking r-bioc-shortread (1.60.0-2) ... 218s Selecting previously unselected package r-cran-rjson. 218s Preparing to unpack .../296-r-cran-rjson_0.2.21-1_ppc64el.deb ... 218s Unpacking r-cran-rjson (0.2.21-1) ... 218s Selecting previously unselected package r-cran-restfulr. 218s Preparing to unpack .../297-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 218s Unpacking r-cran-restfulr (0.0.15-1) ... 218s Selecting previously unselected package r-bioc-rtracklayer. 218s Preparing to unpack .../298-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 218s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 218s Selecting previously unselected package r-bioc-genomicfeatures. 218s Preparing to unpack .../299-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 218s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 218s Selecting previously unselected package r-bioc-edaseq. 218s Preparing to unpack .../300-r-bioc-edaseq_2.36.0+dfsg-1_all.deb ... 218s Unpacking r-bioc-edaseq (2.36.0+dfsg-1) ... 218s Selecting previously unselected package r-cran-statmod. 218s Preparing to unpack .../301-r-cran-statmod_1.5.0-1_ppc64el.deb ... 218s Unpacking r-cran-statmod (1.5.0-1) ... 218s Selecting previously unselected package r-bioc-limma. 218s Preparing to unpack .../302-r-bioc-limma_3.58.1+dfsg-1_ppc64el.deb ... 218s Unpacking r-bioc-limma (3.58.1+dfsg-1) ... 218s Selecting previously unselected package r-bioc-edger. 218s Preparing to unpack .../303-r-bioc-edger_4.0.16+dfsg-1_ppc64el.deb ... 218s Unpacking r-bioc-edger (4.0.16+dfsg-1) ... 218s Selecting previously unselected package r-cran-brio. 218s Preparing to unpack .../304-r-cran-brio_1.1.4-1_ppc64el.deb ... 218s Unpacking r-cran-brio (1.1.4-1) ... 218s Selecting previously unselected package r-cran-ps. 218s Preparing to unpack .../305-r-cran-ps_1.7.6-1_ppc64el.deb ... 218s Unpacking r-cran-ps (1.7.6-1) ... 218s Selecting previously unselected package r-cran-processx. 218s Preparing to unpack .../306-r-cran-processx_3.8.3-1_ppc64el.deb ... 218s Unpacking r-cran-processx (3.8.3-1) ... 218s Selecting previously unselected package r-cran-callr. 218s Preparing to unpack .../307-r-cran-callr_3.7.3-2_all.deb ... 218s Unpacking r-cran-callr (3.7.3-2) ... 218s Selecting previously unselected package r-cran-desc. 218s Preparing to unpack .../308-r-cran-desc_1.4.3-1_all.deb ... 218s Unpacking r-cran-desc (1.4.3-1) ... 218s Selecting previously unselected package r-cran-diffobj. 218s Preparing to unpack .../309-r-cran-diffobj_0.3.5-1_ppc64el.deb ... 218s Unpacking r-cran-diffobj (0.3.5-1) ... 218s Selecting previously unselected package r-cran-kernsmooth. 218s Preparing to unpack .../310-r-cran-kernsmooth_2.23-22-1_ppc64el.deb ... 218s Unpacking r-cran-kernsmooth (2.23-22-1) ... 218s Selecting previously unselected package r-cran-pkgbuild. 218s Preparing to unpack .../311-r-cran-pkgbuild_1.4.3-1_all.deb ... 218s Unpacking r-cran-pkgbuild (1.4.3-1) ... 218s Selecting previously unselected package r-cran-rprojroot. 218s Preparing to unpack .../312-r-cran-rprojroot_2.0.4-1_all.deb ... 218s Unpacking r-cran-rprojroot (2.0.4-1) ... 218s Selecting previously unselected package r-cran-pkgload. 218s Preparing to unpack .../313-r-cran-pkgload_1.3.4-1_all.deb ... 218s Unpacking r-cran-pkgload (1.3.4-1) ... 218s Selecting previously unselected package r-cran-praise. 218s Preparing to unpack .../314-r-cran-praise_1.0.0-4build1_all.deb ... 218s Unpacking r-cran-praise (1.0.0-4build1) ... 218s Selecting previously unselected package r-cran-rematch2. 218s Preparing to unpack .../315-r-cran-rematch2_2.1.2-2build1_all.deb ... 218s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 218s Selecting previously unselected package r-cran-waldo. 218s Preparing to unpack .../316-r-cran-waldo_0.5.2-1build1_all.deb ... 218s Unpacking r-cran-waldo (0.5.2-1build1) ... 218s Selecting previously unselected package r-cran-testthat. 218s Preparing to unpack .../317-r-cran-testthat_3.2.1-1_ppc64el.deb ... 218s Unpacking r-cran-testthat (3.2.1-1) ... 219s Selecting previously unselected package autopkgtest-satdep. 219s Preparing to unpack .../318-1-autopkgtest-satdep.deb ... 219s Unpacking autopkgtest-satdep (0) ... 219s Setting up libjs-json (0~20221030+~1.0.8-1) ... 219s Setting up javascript-common (11+nmu1) ... 219s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 219s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 219s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 219s Setting up libpaper1:ppc64el (1.1.29) ... 219s 219s Creating config file /etc/papersize with new version 219s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 219s Setting up 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(2.30.0+dfsg-1) ... 224s Setting up r-bioc-edaseq (2.36.0+dfsg-1) ... 224s Setting up autopkgtest-satdep (0) ... 224s Processing triggers for man-db (2.12.0-3) ... 226s Processing triggers for install-info (7.1-3) ... 226s Processing triggers for libc-bin (2.39-0ubuntu2) ... 226s Processing triggers for tex-common (6.18) ... 227s Running updmap-sys. This may take some time... done. 227s Running mktexlsr /var/lib/texmf ... done. 227s Building format(s) --all. 270s This may take some time... done. 279s (Reading database ... 123946 files and directories currently installed.) 279s Removing autopkgtest-satdep (0) ... 279s autopkgtest [21:33:13]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 279s autopkgtest [21:33:13]: test pkg-r-autopkgtest: [----------------------- 280s Test: Try to load the R library EDASeq 280s 280s R version 4.3.2 (2023-10-31) -- "Eye Holes" 280s Copyright (C) 2023 The R Foundation for Statistical Computing 280s Platform: powerpc64le-unknown-linux-gnu (64-bit) 280s 280s R is free software and comes with ABSOLUTELY NO WARRANTY. 280s You are welcome to redistribute it under certain conditions. 280s Type 'license()' or 'licence()' for distribution details. 280s 280s R is a collaborative project with many contributors. 280s Type 'contributors()' for more information and 280s 'citation()' on how to cite R or R packages in publications. 280s 280s Type 'demo()' for some demos, 'help()' for on-line help, or 280s 'help.start()' for an HTML browser interface to help. 280s Type 'q()' to quit R. 280s 280s > library('EDASeq') 280s Loading required package: Biobase 280s Loading required package: BiocGenerics 280s 280s Attaching package: ‘BiocGenerics’ 280s 280s The following objects are masked from ‘package:stats’: 280s 280s IQR, mad, sd, var, xtabs 280s 280s The following objects are masked from ‘package:base’: 280s 280s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 280s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 280s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 280s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 280s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 280s table, tapply, union, unique, unsplit, which.max, which.min 280s 280s Welcome to Bioconductor 280s 280s Vignettes contain introductory material; view with 280s 'browseVignettes()'. To cite Bioconductor, see 280s 'citation("Biobase")', and for packages 'citation("pkgname")'. 280s 280s Loading required package: ShortRead 280s Loading required package: BiocParallel 280s Loading required package: Biostrings 280s Loading required package: S4Vectors 280s Loading required package: stats4 281s 281s Attaching package: ‘S4Vectors’ 281s 281s The following object is masked from ‘package:utils’: 281s 281s findMatches 281s 281s The following objects are masked from ‘package:base’: 281s 281s expand.grid, I, unname 281s 281s Loading required package: IRanges 282s Loading required package: XVector 282s Loading required package: GenomeInfoDb 283s 283s Attaching package: ‘Biostrings’ 283s 283s The following object is masked from ‘package:base’: 283s 283s strsplit 283s 283s Loading required package: Rsamtools 283s Loading required package: GenomicRanges 283s Loading required package: GenomicAlignments 283s Loading required package: SummarizedExperiment 283s Loading required package: MatrixGenerics 283s Loading required package: matrixStats 283s 283s Attaching package: ‘matrixStats’ 283s 283s The following objects are masked from ‘package:Biobase’: 283s 283s anyMissing, rowMedians 283s 283s 283s Attaching package: ‘MatrixGenerics’ 283s 283s The following objects are masked from ‘package:matrixStats’: 283s 283s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 283s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 283s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 283s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 283s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 283s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 283s colWeightedMeans, colWeightedMedians, colWeightedSds, 283s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 283s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 283s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 283s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 283s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 283s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 283s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 283s rowWeightedSds, rowWeightedVars 283s 283s The following object is masked from ‘package:Biobase’: 283s 283s rowMedians 283s 291s > 291s > 291s Other tests are currently unsupported! 291s They will be progressively added. 291s autopkgtest [21:33:25]: test pkg-r-autopkgtest: -----------------------] 292s autopkgtest [21:33:26]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 292s pkg-r-autopkgtest PASS 292s autopkgtest [21:33:26]: @@@@@@@@@@@@@@@@@@@@ summary 292s pkg-r-autopkgtest PASS 302s Creating nova instance adt-noble-ppc64el-r-bioc-edaseq-20240317-212834-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...