0s autopkgtest [23:53:37]: starting date and time: 2024-04-18 23:53:37+0000
  0s autopkgtest [23:53:37]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline
  0s autopkgtest [23:53:37]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.tgscg5zl/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:gsl --apt-upgrade r-bioc-dirichletmultinomial --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=gsl/2.7.1+dfsg-6ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-10.secgroup --name adt-noble-ppc64el-r-bioc-dirichletmultinomial-20240418-235337-juju-7f2275-prod-proposed-migration-environment-3-c21a7039-d357-4e85-833f-4c06c98fb81a --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 95s autopkgtest [23:55:12]: testbed dpkg architecture: ppc64el
 95s autopkgtest [23:55:12]: testbed apt version: 2.7.14build2
 95s autopkgtest [23:55:12]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 96s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
 96s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [381 kB]
 96s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB]
 96s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [57.5 kB]
 96s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B]
 96s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [112 kB]
 96s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B]
 96s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [976 B]
 96s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B]
 96s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [587 kB]
 96s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B]
 96s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [1004 B]
 96s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B]
 99s Fetched 1282 kB in 1s (1270 kB/s)
 99s Reading package lists...
101s sh: 4: dhclient: not found
102s Reading package lists...
102s Building dependency tree...
102s Reading state information...
102s Calculating upgrade...
102s The following packages will be upgraded:
102s   libkeyutils1 libnuma1 make netcat-openbsd numactl
103s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
103s Need to get 343 kB of archives.
103s After this operation, 16.4 kB disk space will be freed.
103s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el libkeyutils1 ppc64el 1.6.3-3build1 [11.0 kB]
103s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el netcat-openbsd ppc64el 1.226-1ubuntu2 [46.2 kB]
103s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libnuma1 ppc64el 2.0.18-1build1 [28.2 kB]
103s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el make ppc64el 4.3-4.1build2 [214 kB]
103s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el numactl ppc64el 2.0.18-1build1 [43.9 kB]
103s Fetched 343 kB in 1s (602 kB/s)
103s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71981 files and directories currently installed.)
103s Preparing to unpack .../libkeyutils1_1.6.3-3build1_ppc64el.deb ...
103s Unpacking libkeyutils1:ppc64el (1.6.3-3build1) over (1.6.3-3) ...
103s Preparing to unpack .../netcat-openbsd_1.226-1ubuntu2_ppc64el.deb ...
103s Unpacking netcat-openbsd (1.226-1ubuntu2) over (1.226-1ubuntu1) ...
103s Preparing to unpack .../libnuma1_2.0.18-1build1_ppc64el.deb ...
103s Unpacking libnuma1:ppc64el (2.0.18-1build1) over (2.0.18-1) ...
103s Preparing to unpack .../make_4.3-4.1build2_ppc64el.deb ...
103s Unpacking make (4.3-4.1build2) over (4.3-4.1build1) ...
103s Preparing to unpack .../numactl_2.0.18-1build1_ppc64el.deb ...
103s Unpacking numactl (2.0.18-1build1) over (2.0.18-1) ...
103s Setting up libkeyutils1:ppc64el (1.6.3-3build1) ...
103s Setting up netcat-openbsd (1.226-1ubuntu2) ...
104s Setting up make (4.3-4.1build2) ...
104s Setting up libnuma1:ppc64el (2.0.18-1build1) ...
104s Setting up numactl (2.0.18-1build1) ...
104s Processing triggers for man-db (2.12.0-4build1) ...
105s Processing triggers for libc-bin (2.39-0ubuntu8) ...
105s Reading package lists...
105s Building dependency tree...
105s Reading state information...
105s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
106s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease
106s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease
106s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease
106s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease
107s Reading package lists...
107s Reading package lists...
107s Building dependency tree...
107s Reading state information...
107s Calculating upgrade...
108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
108s Reading package lists...
108s Building dependency tree...
108s Reading state information...
108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
111s autopkgtest [23:55:28]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP Thu Apr  4 22:47:57 UTC 2024
111s autopkgtest [23:55:28]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-dirichletmultinomial
113s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dirichletmultinomial 1.44.0-1 (dsc) [2283 B]
113s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dirichletmultinomial 1.44.0-1 (tar) [438 kB]
113s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dirichletmultinomial 1.44.0-1 (diff) [2804 B]
113s gpgv: Signature made Thu Nov 30 09:27:48 2023 UTC
113s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
113s gpgv:                issuer "tille@debian.org"
113s gpgv: Can't check signature: No public key
113s dpkg-source: warning: cannot verify inline signature for ./r-bioc-dirichletmultinomial_1.44.0-1.dsc: no acceptable signature found
114s autopkgtest [23:55:31]: testing package r-bioc-dirichletmultinomial version 1.44.0-1
114s autopkgtest [23:55:31]: build not needed
117s autopkgtest [23:55:34]: test pkg-r-autopkgtest: preparing testbed
118s Reading package lists...
118s Building dependency tree...
118s Reading state information...
119s Starting pkgProblemResolver with broken count: 0
119s Starting 2 pkgProblemResolver with broken count: 0
119s Done
119s The following additional packages will be installed:
119s   build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu
119s   cpp-powerpc64le-linux-gnu dctrl-tools fontconfig g++ g++-13
119s   g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13
119s   gcc-13-base gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran
119s   gfortran-13 gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu
119s   icu-devtools libasan8 libatomic1 libblas-dev libblas3 libbz2-dev libcairo2
119s   libcc1-0 libdatrie1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1
119s   libgraphite2-3 libgsl27 libgslcblas0 libharfbuzz0b libice6 libicu-dev
119s   libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev
119s   liblapack3 liblsan0 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0
119s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0
119s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
119s   libpng-dev libquadmath0 libreadline-dev libsm6 libstdc++-13-dev libtcl8.6
119s   libthai-data libthai0 libtk8.6 libtsan2 libubsan1 libxcb-render0 libxcb-shm0
119s   libxft2 libxrender1 libxss1 libxt6t64 pkg-config pkg-r-autopkgtest pkgconf
119s   pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics
119s   r-bioc-dirichletmultinomial r-bioc-iranges r-bioc-s4vectors r-cran-lattice
119s   r-cran-mass r-cran-rcolorbrewer r-cran-xtable unzip x11-common xdg-utils zip
119s   zlib1g-dev
119s Suggested packages:
119s   cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib
119s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
119s   gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev
119s   liblapack-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html
119s   icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc tcl8.6 tk8.6
119s   elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base
119s   texlive-latex-base texlive-plain-generic texlive-fonts-recommended
119s   texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
119s   texlive-latex-extra texinfo r-bioc-biobase r-bioc-genomicranges
119s   r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi
119s   r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-runit r-bioc-xvector
119s   r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-biocstyle
119s   r-bioc-summarizedexperiment r-cran-matrix r-bioc-shortread r-bioc-graph
119s   r-cran-data.table r-cran-knitr r-cran-plm r-cran-zoo r-cran-survival
119s Recommended packages:
119s   bzip2-doc libpng-tools r-recommended r-doc-html libfile-mimeinfo-perl
119s   libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
119s The following NEW packages will be installed:
119s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu
119s   cpp-powerpc64le-linux-gnu dctrl-tools fontconfig g++ g++-13
119s   g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13
119s   gcc-13-base gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran
119s   gfortran-13 gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu
119s   icu-devtools libasan8 libatomic1 libblas-dev libblas3 libbz2-dev libcairo2
119s   libcc1-0 libdatrie1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1
119s   libgraphite2-3 libgsl27 libgslcblas0 libharfbuzz0b libice6 libicu-dev
119s   libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev
119s   liblapack3 liblsan0 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0
119s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0
119s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
119s   libpng-dev libquadmath0 libreadline-dev libsm6 libstdc++-13-dev libtcl8.6
119s   libthai-data libthai0 libtk8.6 libtsan2 libubsan1 libxcb-render0 libxcb-shm0
119s   libxft2 libxrender1 libxss1 libxt6t64 pkg-config pkg-r-autopkgtest pkgconf
119s   pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics
119s   r-bioc-dirichletmultinomial r-bioc-iranges r-bioc-s4vectors r-cran-lattice
119s   r-cran-mass r-cran-rcolorbrewer r-cran-xtable unzip x11-common xdg-utils zip
119s   zlib1g-dev
119s 0 upgraded, 98 newly installed, 0 to remove and 0 not upgraded.
119s Need to get 139 MB/139 MB of archives.
119s After this operation, 450 MB of additional disk space will be used.
119s Get:1 /tmp/autopkgtest.eCR2xi/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [768 B]
119s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-base ppc64el 13.2.0-23ubuntu4 [49.0 kB]
119s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3build1 [886 kB]
120s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1build1 [62.1 kB]
120s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [10.7 MB]
121s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-23ubuntu4 [1038 B]
121s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B]
121s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB]
121s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240412-0ubuntu1 [48.1 kB]
121s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240412-0ubuntu1 [161 kB]
121s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240412-0ubuntu1 [32.4 kB]
121s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240412-0ubuntu1 [10.7 kB]
121s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240412-0ubuntu1 [2971 kB]
122s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240412-0ubuntu1 [1327 kB]
122s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240412-0ubuntu1 [2709 kB]
122s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240412-0ubuntu1 [1196 kB]
122s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240412-0ubuntu1 [158 kB]
122s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-23ubuntu4 [1580 kB]
122s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [20.6 MB]
123s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-23ubuntu4 [482 kB]
123s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B]
123s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B]
123s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-23ubuntu4 [2512 kB]
123s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [12.2 MB]
123s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-23ubuntu4 [14.5 kB]
123s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B]
123s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B]
123s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B]
123s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build3 [109 kB]
123s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1.1ubuntu2 [192 kB]
123s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240412-0ubuntu1 [574 kB]
123s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-23ubuntu4 [604 kB]
123s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [11.2 MB]
124s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-23ubuntu4 [11.7 kB]
124s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B]
124s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B]
124s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu3 [247 kB]
124s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3build1 [227 kB]
124s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3build1 [301 kB]
124s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5.1 [51.2 kB]
124s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1build1 [336 kB]
124s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB]
124s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B]
124s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB]
124s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-3build1 [751 kB]
124s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3build1 [22.7 kB]
124s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2build1 [84.6 kB]
124s Get:48 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libgslcblas0 ppc64el 2.7.1+dfsg-6ubuntu2 [86.6 kB]
124s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libgsl27 ppc64el 2.7.1+dfsg-6ubuntu2 [1090 kB]
124s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2build2 [580 kB]
124s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB]
124s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build3 [49.1 kB]
124s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu3 [12.5 MB]
124s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu2 [364 kB]
124s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B]
124s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B]
124s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3build1 [2804 kB]
124s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3build1 [6100 kB]
125s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu2 [485 kB]
125s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2build1 [158 kB]
125s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2build1 [21.8 kB]
125s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.52.1+ds-1build1 [271 kB]
125s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.52.1+ds-1build1 [50.5 kB]
125s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.52.1+ds-1build1 [31.1 kB]
125s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29build1 [13.7 kB]
125s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29build1 [8742 B]
125s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu2 [247 kB]
125s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu2 [230 kB]
125s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu2 [7068 B]
125s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu2 [801 kB]
125s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB]
125s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3.1ubuntu2 [902 kB]
125s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-5build1 [328 kB]
125s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-4build1 [230 kB]
125s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build3 [17.6 kB]
125s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.14+dfsg-1build1 [1204 kB]
125s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB]
125s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B]
125s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.14-1build1 [944 kB]
125s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.2build1 [202 kB]
125s Get:81 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB]
125s Get:82 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB]
125s Get:83 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B]
125s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13build1 [198 kB]
125s Get:85 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu4 [192 kB]
125s Get:86 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
125s Get:87 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.3-2build2 [27.4 MB]
126s Get:88 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.6.1+really5.4.5-1 [207 kB]
126s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.3-2build2 [4334 B]
126s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
126s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB]
126s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB]
126s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB]
126s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-dirichletmultinomial ppc64el 1.44.0-1 [615 kB]
126s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB]
126s Get:96 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB]
126s Get:97 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
126s Get:98 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB]
126s Preconfiguring packages ...
126s Fetched 139 MB in 7s (19.8 MB/s)
126s Selecting previously unselected package gcc-13-base:ppc64el.
127s (Reading database ... 
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(Reading database ... 71981 files and directories currently installed.)
127s Preparing to unpack .../00-gcc-13-base_13.2.0-23ubuntu4_ppc64el.deb ...
127s Unpacking gcc-13-base:ppc64el (13.2.0-23ubuntu4) ...
127s Selecting previously unselected package libisl23:ppc64el.
127s Preparing to unpack .../01-libisl23_0.26-3build1_ppc64el.deb ...
127s Unpacking libisl23:ppc64el (0.26-3build1) ...
127s Selecting previously unselected package libmpc3:ppc64el.
127s Preparing to unpack .../02-libmpc3_1.3.1-1build1_ppc64el.deb ...
127s Unpacking libmpc3:ppc64el (1.3.1-1build1) ...
127s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu.
127s Preparing to unpack .../03-cpp-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ...
127s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
127s Selecting previously unselected package cpp-13.
127s Preparing to unpack .../04-cpp-13_13.2.0-23ubuntu4_ppc64el.deb ...
127s Unpacking cpp-13 (13.2.0-23ubuntu4) ...
127s Selecting previously unselected package cpp-powerpc64le-linux-gnu.
127s Preparing to unpack .../05-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
127s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
127s Selecting previously unselected package cpp.
127s Preparing to unpack .../06-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
127s Unpacking cpp (4:13.2.0-7ubuntu1) ...
127s Selecting previously unselected package libcc1-0:ppc64el.
127s Preparing to unpack .../07-libcc1-0_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libcc1-0:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libgomp1:ppc64el.
127s Preparing to unpack .../08-libgomp1_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libgomp1:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libitm1:ppc64el.
127s Preparing to unpack .../09-libitm1_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libitm1:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libatomic1:ppc64el.
127s Preparing to unpack .../10-libatomic1_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libatomic1:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libasan8:ppc64el.
127s Preparing to unpack .../11-libasan8_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libasan8:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package liblsan0:ppc64el.
127s Preparing to unpack .../12-liblsan0_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking liblsan0:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libtsan2:ppc64el.
127s Preparing to unpack .../13-libtsan2_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libtsan2:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libubsan1:ppc64el.
127s Preparing to unpack .../14-libubsan1_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libubsan1:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libquadmath0:ppc64el.
127s Preparing to unpack .../15-libquadmath0_14-20240412-0ubuntu1_ppc64el.deb ...
127s Unpacking libquadmath0:ppc64el (14-20240412-0ubuntu1) ...
127s Selecting previously unselected package libgcc-13-dev:ppc64el.
127s Preparing to unpack .../16-libgcc-13-dev_13.2.0-23ubuntu4_ppc64el.deb ...
127s Unpacking libgcc-13-dev:ppc64el (13.2.0-23ubuntu4) ...
127s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu.
127s Preparing to unpack .../17-gcc-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ...
127s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
128s Selecting previously unselected package gcc-13.
128s Preparing to unpack .../18-gcc-13_13.2.0-23ubuntu4_ppc64el.deb ...
128s Unpacking gcc-13 (13.2.0-23ubuntu4) ...
128s Selecting previously unselected package gcc-powerpc64le-linux-gnu.
128s Preparing to unpack .../19-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
128s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
128s Selecting previously unselected package gcc.
128s Preparing to unpack .../20-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
128s Unpacking gcc (4:13.2.0-7ubuntu1) ...
128s Selecting previously unselected package libstdc++-13-dev:ppc64el.
128s Preparing to unpack .../21-libstdc++-13-dev_13.2.0-23ubuntu4_ppc64el.deb ...
128s Unpacking libstdc++-13-dev:ppc64el (13.2.0-23ubuntu4) ...
128s Selecting previously unselected package g++-13-powerpc64le-linux-gnu.
128s Preparing to unpack .../22-g++-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ...
128s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
129s Selecting previously unselected package g++-13.
129s Preparing to unpack .../23-g++-13_13.2.0-23ubuntu4_ppc64el.deb ...
129s Unpacking g++-13 (13.2.0-23ubuntu4) ...
129s Selecting previously unselected package g++-powerpc64le-linux-gnu.
129s Preparing to unpack .../24-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
129s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
129s Selecting previously unselected package g++.
129s Preparing to unpack .../25-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
129s Unpacking g++ (4:13.2.0-7ubuntu1) ...
129s Selecting previously unselected package build-essential.
129s Preparing to unpack .../26-build-essential_12.10ubuntu1_ppc64el.deb ...
129s Unpacking build-essential (12.10ubuntu1) ...
129s Selecting previously unselected package dctrl-tools.
129s Preparing to unpack .../27-dctrl-tools_2.24-3build3_ppc64el.deb ...
129s Unpacking dctrl-tools (2.24-3build3) ...
129s Selecting previously unselected package fontconfig.
129s Preparing to unpack .../28-fontconfig_2.15.0-1.1ubuntu2_ppc64el.deb ...
129s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
129s Selecting previously unselected package libgfortran5:ppc64el.
129s Preparing to unpack .../29-libgfortran5_14-20240412-0ubuntu1_ppc64el.deb ...
129s Unpacking libgfortran5:ppc64el (14-20240412-0ubuntu1) ...
129s Selecting previously unselected package libgfortran-13-dev:ppc64el.
129s Preparing to unpack .../30-libgfortran-13-dev_13.2.0-23ubuntu4_ppc64el.deb ...
129s Unpacking libgfortran-13-dev:ppc64el (13.2.0-23ubuntu4) ...
129s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu.
129s Preparing to unpack .../31-gfortran-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ...
129s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
129s Selecting previously unselected package gfortran-13.
129s Preparing to unpack .../32-gfortran-13_13.2.0-23ubuntu4_ppc64el.deb ...
129s Unpacking gfortran-13 (13.2.0-23ubuntu4) ...
129s Selecting previously unselected package gfortran-powerpc64le-linux-gnu.
129s Preparing to unpack .../33-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
129s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
129s Selecting previously unselected package gfortran.
129s Preparing to unpack .../34-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
129s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
129s Selecting previously unselected package icu-devtools.
129s Preparing to unpack .../35-icu-devtools_74.2-1ubuntu3_ppc64el.deb ...
129s Unpacking icu-devtools (74.2-1ubuntu3) ...
129s Selecting previously unselected package libblas3:ppc64el.
129s Preparing to unpack .../36-libblas3_3.12.0-3build1_ppc64el.deb ...
129s Unpacking libblas3:ppc64el (3.12.0-3build1) ...
129s Selecting previously unselected package libblas-dev:ppc64el.
129s Preparing to unpack .../37-libblas-dev_3.12.0-3build1_ppc64el.deb ...
129s Unpacking libblas-dev:ppc64el (3.12.0-3build1) ...
129s Selecting previously unselected package libbz2-dev:ppc64el.
129s Preparing to unpack .../38-libbz2-dev_1.0.8-5.1_ppc64el.deb ...
129s Unpacking libbz2-dev:ppc64el (1.0.8-5.1) ...
129s Selecting previously unselected package libpixman-1-0:ppc64el.
129s Preparing to unpack .../39-libpixman-1-0_0.42.2-1build1_ppc64el.deb ...
129s Unpacking libpixman-1-0:ppc64el (0.42.2-1build1) ...
129s Selecting previously unselected package libxcb-render0:ppc64el.
129s Preparing to unpack .../40-libxcb-render0_1.15-1_ppc64el.deb ...
129s Unpacking libxcb-render0:ppc64el (1.15-1) ...
129s Selecting previously unselected package libxcb-shm0:ppc64el.
129s Preparing to unpack .../41-libxcb-shm0_1.15-1_ppc64el.deb ...
129s Unpacking libxcb-shm0:ppc64el (1.15-1) ...
129s Selecting previously unselected package libxrender1:ppc64el.
129s Preparing to unpack .../42-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ...
129s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ...
129s Selecting previously unselected package libcairo2:ppc64el.
129s Preparing to unpack .../43-libcairo2_1.18.0-3build1_ppc64el.deb ...
129s Unpacking libcairo2:ppc64el (1.18.0-3build1) ...
129s Selecting previously unselected package libdatrie1:ppc64el.
129s Preparing to unpack .../44-libdatrie1_0.2.13-3build1_ppc64el.deb ...
129s Unpacking libdatrie1:ppc64el (0.2.13-3build1) ...
129s Selecting previously unselected package libgraphite2-3:ppc64el.
129s Preparing to unpack .../45-libgraphite2-3_1.3.14-2build1_ppc64el.deb ...
130s Unpacking libgraphite2-3:ppc64el (1.3.14-2build1) ...
130s Selecting previously unselected package libgslcblas0:ppc64el.
130s Preparing to unpack .../46-libgslcblas0_2.7.1+dfsg-6ubuntu2_ppc64el.deb ...
130s Unpacking libgslcblas0:ppc64el (2.7.1+dfsg-6ubuntu2) ...
130s Selecting previously unselected package libgsl27:ppc64el.
130s Preparing to unpack .../47-libgsl27_2.7.1+dfsg-6ubuntu2_ppc64el.deb ...
130s Unpacking libgsl27:ppc64el (2.7.1+dfsg-6ubuntu2) ...
130s Selecting previously unselected package libharfbuzz0b:ppc64el.
130s Preparing to unpack .../48-libharfbuzz0b_8.3.0-2build2_ppc64el.deb ...
130s Unpacking libharfbuzz0b:ppc64el (8.3.0-2build2) ...
130s Selecting previously unselected package x11-common.
130s Preparing to unpack .../49-x11-common_1%3a7.7+23ubuntu3_all.deb ...
130s Unpacking x11-common (1:7.7+23ubuntu3) ...
130s Selecting previously unselected package libice6:ppc64el.
130s Preparing to unpack .../50-libice6_2%3a1.0.10-1build3_ppc64el.deb ...
130s Unpacking libice6:ppc64el (2:1.0.10-1build3) ...
130s Selecting previously unselected package libicu-dev:ppc64el.
130s Preparing to unpack .../51-libicu-dev_74.2-1ubuntu3_ppc64el.deb ...
130s Unpacking libicu-dev:ppc64el (74.2-1ubuntu3) ...
130s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el.
130s Preparing to unpack .../52-libjpeg-turbo8-dev_2.1.5-2ubuntu2_ppc64el.deb ...
130s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu2) ...
130s Selecting previously unselected package libjpeg8-dev:ppc64el.
130s Preparing to unpack .../53-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ...
130s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ...
130s Selecting previously unselected package libjpeg-dev:ppc64el.
130s Preparing to unpack .../54-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ...
130s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ...
130s Selecting previously unselected package liblapack3:ppc64el.
130s Preparing to unpack .../55-liblapack3_3.12.0-3build1_ppc64el.deb ...
130s Unpacking liblapack3:ppc64el (3.12.0-3build1) ...
130s Selecting previously unselected package liblapack-dev:ppc64el.
130s Preparing to unpack .../56-liblapack-dev_3.12.0-3build1_ppc64el.deb ...
130s Unpacking liblapack-dev:ppc64el (3.12.0-3build1) ...
130s Selecting previously unselected package libncurses-dev:ppc64el.
130s Preparing to unpack .../57-libncurses-dev_6.4+20240113-1ubuntu2_ppc64el.deb ...
130s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu2) ...
131s Selecting previously unselected package libthai-data.
131s Preparing to unpack .../58-libthai-data_0.1.29-2build1_all.deb ...
131s Unpacking libthai-data (0.1.29-2build1) ...
131s Selecting previously unselected package libthai0:ppc64el.
131s Preparing to unpack .../59-libthai0_0.1.29-2build1_ppc64el.deb ...
131s Unpacking libthai0:ppc64el (0.1.29-2build1) ...
131s Selecting previously unselected package libpango-1.0-0:ppc64el.
131s Preparing to unpack .../60-libpango-1.0-0_1.52.1+ds-1build1_ppc64el.deb ...
131s Unpacking libpango-1.0-0:ppc64el (1.52.1+ds-1build1) ...
131s Selecting previously unselected package libpangoft2-1.0-0:ppc64el.
131s Preparing to unpack .../61-libpangoft2-1.0-0_1.52.1+ds-1build1_ppc64el.deb ...
131s Unpacking libpangoft2-1.0-0:ppc64el (1.52.1+ds-1build1) ...
131s Selecting previously unselected package libpangocairo-1.0-0:ppc64el.
131s Preparing to unpack .../62-libpangocairo-1.0-0_1.52.1+ds-1build1_ppc64el.deb ...
131s Unpacking libpangocairo-1.0-0:ppc64el (1.52.1+ds-1build1) ...
131s Selecting previously unselected package libpaper1:ppc64el.
131s Preparing to unpack .../63-libpaper1_1.1.29build1_ppc64el.deb ...
131s Unpacking libpaper1:ppc64el (1.1.29build1) ...
131s Selecting previously unselected package libpaper-utils.
131s Preparing to unpack .../64-libpaper-utils_1.1.29build1_ppc64el.deb ...
131s Unpacking libpaper-utils (1.1.29build1) ...
131s Selecting previously unselected package libpcre2-16-0:ppc64el.
131s Preparing to unpack .../65-libpcre2-16-0_10.42-4ubuntu2_ppc64el.deb ...
131s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu2) ...
131s Selecting previously unselected package libpcre2-32-0:ppc64el.
131s Preparing to unpack .../66-libpcre2-32-0_10.42-4ubuntu2_ppc64el.deb ...
131s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu2) ...
131s Selecting previously unselected package libpcre2-posix3:ppc64el.
131s Preparing to unpack .../67-libpcre2-posix3_10.42-4ubuntu2_ppc64el.deb ...
131s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu2) ...
131s Selecting previously unselected package libpcre2-dev:ppc64el.
131s Preparing to unpack .../68-libpcre2-dev_10.42-4ubuntu2_ppc64el.deb ...
131s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu2) ...
131s Selecting previously unselected package libpkgconf3:ppc64el.
131s Preparing to unpack .../69-libpkgconf3_1.8.1-2_ppc64el.deb ...
131s Unpacking libpkgconf3:ppc64el (1.8.1-2) ...
131s Selecting previously unselected package zlib1g-dev:ppc64el.
131s Preparing to unpack .../70-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_ppc64el.deb ...
131s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ...
131s Selecting previously unselected package libpng-dev:ppc64el.
131s Preparing to unpack .../71-libpng-dev_1.6.43-5build1_ppc64el.deb ...
131s Unpacking libpng-dev:ppc64el (1.6.43-5build1) ...
131s Selecting previously unselected package libreadline-dev:ppc64el.
131s Preparing to unpack .../72-libreadline-dev_8.2-4build1_ppc64el.deb ...
131s Unpacking libreadline-dev:ppc64el (8.2-4build1) ...
131s Selecting previously unselected package libsm6:ppc64el.
131s Preparing to unpack .../73-libsm6_2%3a1.2.3-1build3_ppc64el.deb ...
131s Unpacking libsm6:ppc64el (2:1.2.3-1build3) ...
131s Selecting previously unselected package libtcl8.6:ppc64el.
131s Preparing to unpack .../74-libtcl8.6_8.6.14+dfsg-1build1_ppc64el.deb ...
131s Unpacking libtcl8.6:ppc64el (8.6.14+dfsg-1build1) ...
131s Selecting previously unselected package libxft2:ppc64el.
131s Preparing to unpack .../75-libxft2_2.3.6-1build1_ppc64el.deb ...
131s Unpacking libxft2:ppc64el (2.3.6-1build1) ...
131s Selecting previously unselected package libxss1:ppc64el.
131s Preparing to unpack .../76-libxss1_1%3a1.2.3-1build3_ppc64el.deb ...
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132s Setting up libgraphite2-3:ppc64el (1.3.14-2build1) ...
132s Setting up libpixman-1-0:ppc64el (0.42.2-1build1) ...
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132s 
132s Creating config file /etc/papersize with new version
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134s Regenerating fonts cache... done.
134s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu2) ...
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134s Setting up libgslcblas0:ppc64el (2.7.1+dfsg-6ubuntu2) ...
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135s Setting up libgsl27:ppc64el (2.7.1+dfsg-6ubuntu2) ...
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135s Setting up libreadline-dev:ppc64el (8.2-4build1) ...
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135s Setting up libpcre2-32-0:ppc64el (10.42-4ubuntu2) ...
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135s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode
135s Setting up libpkgconf3:ppc64el (1.8.1-2) ...
135s Setting up gcc-13-base:ppc64el (13.2.0-23ubuntu4) ...
135s Setting up libquadmath0:ppc64el (14-20240412-0ubuntu1) ...
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135s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ...
135s Setting up libpcre2-posix3:ppc64el (10.42-4ubuntu2) ...
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135s Setting up libxss1:ppc64el (1:1.2.3-1build3) ...
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135s Setting up libisl23:ppc64el (0.26-3build1) ...
135s Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
135s Setting up libicu-dev:ppc64el (74.2-1ubuntu3) ...
135s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
135s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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135s Setting up libblas-dev:ppc64el (3.12.0-3build1) ...
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135s Setting up dctrl-tools (2.24-3build3) ...
135s Setting up libitm1:ppc64el (14-20240412-0ubuntu1) ...
135s Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
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135s Setting up libxft2:ppc64el (2.3.6-1build1) ...
135s Setting up libpcre2-dev:ppc64el (10.42-4ubuntu2) ...
135s Setting up cpp-13 (13.2.0-23ubuntu4) ...
135s Setting up libtk8.6:ppc64el (8.6.14-1build1) ...
135s Setting up libpng-dev:ppc64el (1.6.43-5build1) ...
135s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ...
135s Setting up pkgconf:ppc64el (1.8.1-2) ...
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135s Setting up liblapack-dev:ppc64el (3.12.0-3build1) ...
135s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode
135s Setting up pkg-config:ppc64el (1.8.1-2) ...
135s Setting up libgcc-13-dev:ppc64el (13.2.0-23ubuntu4) ...
135s Setting up cpp (4:13.2.0-7ubuntu1) ...
135s Setting up libgfortran-13-dev:ppc64el (13.2.0-23ubuntu4) ...
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135s Setting up libstdc++-13-dev:ppc64el (13.2.0-23ubuntu4) ...
135s Setting up libpango-1.0-0:ppc64el (1.52.1+ds-1build1) ...
135s Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
135s Setting up libxt6t64:ppc64el (1:1.2.1-1.2build1) ...
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135s Setting up libpangocairo-1.0-0:ppc64el (1.52.1+ds-1build1) ...
135s Setting up gfortran-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ...
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135s 
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135s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
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135s Setting up r-bioc-biocgenerics (0.48.1-2) ...
135s Setting up r-cran-mass (7.3-60.0.1-1) ...
135s Setting up r-cran-xtable (1:1.8-4-2) ...
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135s Setting up gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
135s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
135s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ...
135s Setting up g++ (4:13.2.0-7ubuntu1) ...
135s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
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135s Setting up r-bioc-iranges (2.36.0-1) ...
135s Setting up r-bioc-dirichletmultinomial (1.44.0-1) ...
135s Setting up gfortran (4:13.2.0-7ubuntu1) ...
135s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
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135s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
135s Setting up autopkgtest-satdep (0) ...
135s Processing triggers for man-db (2.12.0-4build1) ...
137s Processing triggers for install-info (7.1-3build2) ...
137s Processing triggers for libc-bin (2.39-0ubuntu8) ...
141s (Reading database ... 76159 files and directories currently installed.)
141s Removing autopkgtest-satdep (0) ...
142s autopkgtest [23:55:59]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
142s autopkgtest [23:55:59]: test pkg-r-autopkgtest: [-----------------------
142s Test: Try to load the R library DirichletMultinomial
142s 
142s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
142s Copyright (C) 2024 The R Foundation for Statistical Computing
142s Platform: powerpc64le-unknown-linux-gnu (64-bit)
142s 
142s R is free software and comes with ABSOLUTELY NO WARRANTY.
142s You are welcome to redistribute it under certain conditions.
142s Type 'license()' or 'licence()' for distribution details.
142s 
142s R is a collaborative project with many contributors.
142s Type 'contributors()' for more information and
142s 'citation()' on how to cite R or R packages in publications.
142s 
142s Type 'demo()' for some demos, 'help()' for on-line help, or
142s 'help.start()' for an HTML browser interface to help.
142s Type 'q()' to quit R.
142s 
142s > library('DirichletMultinomial')
142s Loading required package: S4Vectors
142s Loading required package: stats4
142s Loading required package: BiocGenerics
142s 
142s Attaching package: ‘BiocGenerics’
142s 
142s The following objects are masked from ‘package:stats’:
142s 
142s     IQR, mad, sd, var, xtabs
142s 
142s The following objects are masked from ‘package:base’:
142s 
142s     anyDuplicated, aperm, append, as.data.frame, basename, cbind,
142s     colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
142s     get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
142s     match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
142s     Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort,
142s     table, tapply, union, unique, unsplit, which.max, which.min
142s 
143s 
143s Attaching package: ‘S4Vectors’
143s 
143s The following object is masked from ‘package:utils’:
143s 
143s     findMatches
143s 
143s The following objects are masked from ‘package:base’:
143s 
143s     expand.grid, I, unname
143s 
143s Loading required package: IRanges
144s > 
144s > 
144s Other tests are currently unsupported!
144s They will be progressively added.
144s autopkgtest [23:56:01]: test pkg-r-autopkgtest: -----------------------]
145s autopkgtest [23:56:02]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
145s pkg-r-autopkgtest    PASS
145s autopkgtest [23:56:02]: @@@@@@@@@@@@@@@@@@@@ summary
145s pkg-r-autopkgtest    PASS
156s Creating nova instance adt-noble-ppc64el-r-bioc-dirichletmultinomial-20240418-235337-juju-7f2275-prod-proposed-migration-environment-3-c21a7039-d357-4e85-833f-4c06c98fb81a from image adt/ubuntu-noble-ppc64el-server-20240418.img (UUID eb57e9e5-70fe-4878-ae85-dd88e864cb24)...