0s autopkgtest [17:00:49]: starting date and time: 2024-03-23 17:00:49+0000 0s autopkgtest [17:00:49]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [17:00:49]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ps74ysnv/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python3-stdlib-extensions,src:gdbm --apt-upgrade python-pauvre --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-stdlib-extensions/3.12.2-3ubuntu1.1 gdbm/1.23-5.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-ppc64el-20.secgroup --name adt-noble-ppc64el-python-pauvre-20240323-170049-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 152s autopkgtest [17:03:21]: testbed dpkg architecture: ppc64el 152s autopkgtest [17:03:21]: testbed apt version: 2.7.12 152s autopkgtest [17:03:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup 153s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 153s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3969 kB] 154s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 154s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [493 kB] 154s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 154s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [659 kB] 154s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 154s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 154s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 154s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4248 kB] 154s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 154s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [60.8 kB] 154s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 157s Fetched 9623 kB in 2s (4172 kB/s) 158s Reading package lists... 160s Reading package lists... 160s Building dependency tree... 160s Reading state information... 160s Calculating upgrade... 161s The following packages will be REMOVED: 161s libgdbm6 161s The following NEW packages will be installed: 161s libgdbm6t64 161s The following packages will be upgraded: 161s cloud-init fonts-ubuntu-console libbsd0 libc-bin libc6 locales 161s python3-distutils python3-gdbm python3-lib2to3 python3-markupsafe 161s 10 upgraded, 1 newly installed, 1 to remove and 0 not upgraded. 161s Need to get 9217 kB of archives. 161s After this operation, 60.4 kB disk space will be freed. 161s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6 ppc64el 2.39-0ubuntu6 [3274 kB] 161s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-bin ppc64el 2.39-0ubuntu6 [751 kB] 161s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el python3-gdbm ppc64el 3.12.2-3ubuntu1.1 [19.8 kB] 161s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libgdbm6t64 ppc64el 1.23-5.1 [41.9 kB] 161s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libbsd0 ppc64el 0.12.1-1 [56.9 kB] 161s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el locales all 2.39-0ubuntu6 [4232 kB] 161s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 161s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el python3-distutils all 3.12.2-3ubuntu1.1 [133 kB] 161s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el python3-lib2to3 all 3.12.2-3ubuntu1.1 [79.1 kB] 161s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-markupsafe ppc64el 2.1.5-1build1 [13.2 kB] 161s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el cloud-init all 24.1.2-0ubuntu1 [597 kB] 162s Preconfiguring packages ... 162s Fetched 9217 kB in 1s (10.0 MB/s) 162s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 162s Preparing to unpack .../libc6_2.39-0ubuntu6_ppc64el.deb ... 162s Unpacking libc6:ppc64el (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 162s Setting up libc6:ppc64el (2.39-0ubuntu6) ... 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 163s Preparing to unpack .../libc-bin_2.39-0ubuntu6_ppc64el.deb ... 163s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 163s Setting up libc-bin (2.39-0ubuntu6) ... 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 163s Preparing to unpack .../python3-gdbm_3.12.2-3ubuntu1.1_ppc64el.deb ... 163s Unpacking python3-gdbm:ppc64el (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 163s dpkg: libgdbm6:ppc64el: dependency problems, but removing anyway as you requested: 163s man-db depends on libgdbm6 (>= 1.16). 163s libperl5.38:ppc64el depends on libgdbm6 (>= 1.21). 163s libgdbm-compat4:ppc64el depends on libgdbm6 (>= 1.16). 163s 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 163s Removing libgdbm6:ppc64el (1.23-5) ... 163s Selecting previously unselected package libgdbm6t64:ppc64el. 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70152 files and directories currently installed.) 163s Preparing to unpack .../0-libgdbm6t64_1.23-5.1_ppc64el.deb ... 163s Unpacking libgdbm6t64:ppc64el (1.23-5.1) ... 163s Preparing to unpack .../1-libbsd0_0.12.1-1_ppc64el.deb ... 163s Unpacking libbsd0:ppc64el (0.12.1-1) over (0.11.8-1) ... 163s Preparing to unpack .../2-locales_2.39-0ubuntu6_all.deb ... 163s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 163s Preparing to unpack .../3-fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 163s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 163s Preparing to unpack .../4-python3-distutils_3.12.2-3ubuntu1.1_all.deb ... 163s Unpacking python3-distutils (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 163s Preparing to unpack .../5-python3-lib2to3_3.12.2-3ubuntu1.1_all.deb ... 163s Unpacking python3-lib2to3 (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 164s Preparing to unpack .../6-python3-markupsafe_2.1.5-1build1_ppc64el.deb ... 164s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 164s Preparing to unpack .../7-cloud-init_24.1.2-0ubuntu1_all.deb ... 164s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 164s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 164s Setting up cloud-init (24.1.2-0ubuntu1) ... 165s Setting up libgdbm6t64:ppc64el (1.23-5.1) ... 165s Setting up python3-gdbm:ppc64el (3.12.2-3ubuntu1.1) ... 165s Setting up locales (2.39-0ubuntu6) ... 166s Generating locales (this might take a while)... 167s en_US.UTF-8... done 167s Generation complete. 167s Setting up python3-markupsafe (2.1.5-1build1) ... 167s Setting up libbsd0:ppc64el (0.12.1-1) ... 167s Setting up python3-lib2to3 (3.12.2-3ubuntu1.1) ... 167s Setting up python3-distutils (3.12.2-3ubuntu1.1) ... 168s python3.12: can't get files for byte-compilation 168s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 168s Processing triggers for man-db (2.12.0-3) ... 169s Processing triggers for libc-bin (2.39-0ubuntu6) ... 169s Reading package lists... 169s Building dependency tree... 169s Reading state information... 169s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 170s sh: Attempting to set up Debian/Ubuntu apt sources automatically 170s sh: Distribution appears to be Ubuntu 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 171s eatmydata is already the newest version (131-1). 171s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 171s dbus is already the newest version (1.14.10-4ubuntu1). 171s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 171s Reading package lists... 172s Building dependency tree... 172s Reading state information... 172s rng-tools-debian is already the newest version (2.4). 172s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 172s Reading package lists... 172s Building dependency tree... 172s Reading state information... 172s The following packages will be REMOVED: 172s cloud-init* python3-configobj* python3-debconf* 172s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 172s After this operation, 3256 kB disk space will be freed. 172s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 172s Removing cloud-init (24.1.2-0ubuntu1) ... 173s Removing python3-configobj (5.0.8-3) ... 173s Removing python3-debconf (1.5.86) ... 173s Processing triggers for man-db (2.12.0-3) ... 173s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69768 files and directories currently installed.) 173s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 174s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 174s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 174s invoke-rc.d: policy-rc.d denied execution of try-restart. 174s Reading package lists... 174s Building dependency tree... 174s Reading state information... 174s linux-generic is already the newest version (6.8.0-11.11+1). 174s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 175s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 175s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 175s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 177s Reading package lists... 177s Reading package lists... 177s Building dependency tree... 177s Reading state information... 177s Calculating upgrade... 178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 178s Reading package lists... 178s Building dependency tree... 178s Reading state information... 178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 178s autopkgtest [17:03:47]: rebooting testbed after setup commands that affected boot 334s autopkgtest [17:06:23]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 337s autopkgtest [17:06:26]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pauvre 338s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-pauvre 0.2.3-3 (dsc) [2485 B] 338s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-pauvre 0.2.3-3 (tar) [61.9 kB] 338s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-pauvre 0.2.3-3 (diff) [7968 B] 339s gpgv: Signature made Wed Sep 6 20:23:37 2023 UTC 339s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 339s gpgv: issuer "emollier@debian.org" 339s gpgv: Can't check signature: No public key 339s dpkg-source: warning: cannot verify inline signature for ./python-pauvre_0.2.3-3.dsc: no acceptable signature found 339s autopkgtest [17:06:28]: testing package python-pauvre version 0.2.3-3 339s autopkgtest [17:06:28]: build not needed 339s autopkgtest [17:06:28]: test run-unit-test: preparing testbed 343s Reading package lists... 343s Building dependency tree... 343s Reading state information... 343s Starting pkgProblemResolver with broken count: 0 343s Starting 2 pkgProblemResolver with broken count: 0 343s Done 343s The following additional packages will be installed: 343s blt fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono 343s fonts-lyx fonts-urw-base35 libblas3 libcairo2 libdeflate0 libfontconfig1 343s libfontenc1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 343s libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 343s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 libpixman-1-0 343s libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 343s libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 libxft2 libxrender1 343s libxslt1.1 libxss1 python-matplotlib-data python3-appdirs python3-biopython 343s python3-brotli python3-cairo python3-contourpy python3-cycler 343s python3-dateutil python3-decorator python3-fonttools python3-freetype 343s python3-fs python3-joblib python3-kiwisolver python3-lxml python3-lz4 343s python3-matplotlib python3-mpmath python3-nanoget-examples python3-numpy 343s python3-packaging python3-pandas python3-pandas-lib python3-pauvre 343s python3-pil python3-pil.imagetk python3-reportlab python3-rlpycairo 343s python3-scipy python3-sklearn python3-sklearn-lib python3-sympy 343s python3-threadpoolctl python3-tk python3-ufolib2 python3-unicodedata2 343s sgml-base tk8.6-blt2.5 unicode-data w3c-sgml-lib x11-common xfonts-encodings 343s xfonts-utils xml-core 343s Suggested packages: 343s blt-demo fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 343s libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 bwa clustalo clustalw 343s dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons 343s python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 raxml samtools 343s t-coffee wise python-cycler-doc python-lxml-doc cm-super-minimal dvipng 343s ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 343s librsvg2-common python3-cairocffi python3-gi-cairo python3-gobject 343s python3-pyqt5 python3-sip python3-tornado texlive-extra-utils 343s texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc gfortran python3-dev 343s python3-pytest python-pandas-doc python3-statsmodels python-pil-doc 343s pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel 343s rl-renderpm python-scipy-doc python3-dap python-sklearn-doc 343s texlive-fonts-extra python-sympy-doc tix python3-tk-dbg sgml-base-doc 343s debhelper 343s Recommended packages: 343s javascript-common python-biopython-doc ncbi-blast+ python3-pytest 343s python3-simplejson python3-psutil python3-bs4 python3-cssselect 343s python3-html5lib python3-bottleneck python3-numexpr python3-odf 343s python3-openpyxl python3-tables python3-olefile g++ | c++-compiler 343s isympy-common 343s The following NEW packages will be installed: 343s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core 343s fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 libblas3 343s libcairo2 libdeflate0 libfontconfig1 libfontenc1 libgfortran5 libgomp1 343s libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 343s libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 343s libopenjp2-7 libpixman-1-0 libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 343s libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 343s libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 python-matplotlib-data 343s python3-appdirs python3-biopython python3-brotli python3-cairo 343s python3-contourpy python3-cycler python3-dateutil python3-decorator 343s python3-fonttools python3-freetype python3-fs python3-joblib 343s python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib 343s python3-mpmath python3-nanoget-examples python3-numpy python3-packaging 343s python3-pandas python3-pandas-lib python3-pauvre python3-pil 343s python3-pil.imagetk python3-reportlab python3-rlpycairo python3-scipy 343s python3-sklearn python3-sklearn-lib python3-sympy python3-threadpoolctl 343s python3-tk python3-ufolib2 python3-unicodedata2 sgml-base tk8.6-blt2.5 343s unicode-data w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 343s 0 upgraded, 88 newly installed, 0 to remove and 0 not upgraded. 343s Need to get 134 MB/134 MB of archives. 343s After this operation, 553 MB of additional disk space will be used. 343s Get:1 /tmp/autopkgtest.jqXs9Z/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [724 B] 343s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el sgml-base all 1.31 [11.4 kB] 343s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 344s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 344s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 344s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontenc1 ppc64el 1:1.1.8-1 [15.7 kB] 344s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 344s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 344s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el xfonts-utils ppc64el 1:7.7+6build2 [112 kB] 344s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-urw-base35 all 20200910-8 [11.0 MB] 344s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 344s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 344s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 344s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 344s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 344s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.14-1 [944 kB] 344s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7 [778 kB] 344s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el blt ppc64el 2.5.3+dfsg-7 [4832 B] 344s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-extra all 2.37-8 [1947 kB] 344s Get:20 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lyx all 2.4.0~RC3-1 [170 kB] 344s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 344s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 344s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 344s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 344s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 344s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 344s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 344s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 344s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 344s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 345s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el libimagequant0 ppc64el 2.18.0-1 [42.5 kB] 345s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 345s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 345s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 345s Get:35 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 345s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 345s Get:37 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1 [32.8 kB] 345s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el liblcms2-2 ppc64el 2.14-2 [243 kB] 345s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 345s Get:40 http://ftpmaster.internal/ubuntu noble/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6 [220 kB] 345s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el libraqm0 ppc64el 0.10.1-1 [18.9 kB] 345s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 345s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 345s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 345s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 345s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpdemux2 ppc64el 1.3.2-0.4 [14.4 kB] 345s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpmux3 ppc64el 1.3.2-0.4 [31.2 kB] 345s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1 [192 kB] 345s Get:49 http://ftpmaster.internal/ubuntu noble/universe ppc64el python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 345s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 345s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.24.2-2 [5581 kB] 345s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-tk ppc64el 3.11.5-1 [116 kB] 345s Get:53 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pil.imagetk ppc64el 10.2.0-1 [10.1 kB] 345s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libopenjp2-7 ppc64el 2.5.0-2 [233 kB] 345s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-pil ppc64el 10.2.0-1 [526 kB] 345s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-cairo ppc64el 1.25.1-2 [162 kB] 345s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-freetype all 2.4.0-1 [83.1 kB] 345s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-rlpycairo all 0.3.0-3 [9130 B] 345s Get:59 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-reportlab all 4.1.0-1 [683 kB] 345s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el xml-core all 0.19 [20.3 kB] 345s Get:61 http://ftpmaster.internal/ubuntu noble/universe ppc64el w3c-sgml-lib all 1.3-3 [280 kB] 345s Get:62 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-biopython ppc64el 1.81+dfsg-3 [1738 kB] 345s Get:63 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-brotli ppc64el 1.1.0-2 [420 kB] 345s Get:64 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-contourpy ppc64el 1.0.7-1build2 [300 kB] 345s Get:65 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-cycler all 0.11.0-2 [8202 B] 345s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-dateutil all 2.8.2-3 [79.2 kB] 345s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 345s Get:68 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-scipy ppc64el 1.11.4-6 [21.4 MB] 346s Get:69 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 346s Get:70 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-mpmath all 1.2.1-3 [421 kB] 346s Get:71 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sympy all 1.12-7 [3966 kB] 346s Get:72 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fs all 2.4.16-3 [91.1 kB] 346s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-lxml ppc64el 5.1.0-1 [2191 kB] 346s Get:74 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build2 [28.8 kB] 346s Get:75 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-unicodedata2 ppc64el 15.1.0+ds-1 [368 kB] 346s Get:76 http://ftpmaster.internal/ubuntu noble/universe ppc64el unicode-data all 15.1.0-1 [8878 kB] 346s Get:77 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fonttools ppc64el 4.46.0-1 [1746 kB] 346s Get:78 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-joblib all 1.3.2-1 [207 kB] 346s Get:79 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-kiwisolver ppc64el 1.4.4-2 [55.8 kB] 346s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-packaging all 23.2-1 [40.6 kB] 346s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-matplotlib ppc64el 3.6.3-1ubuntu3 [7651 kB] 346s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-nanoget-examples all 1.19.3-1 [26.2 MB] 347s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas-lib ppc64el 2.1.4+dfsg-4ubuntu2 [8837 kB] 347s Get:84 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 347s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-threadpoolctl all 3.1.0-1 [21.3 kB] 347s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sklearn-lib ppc64el 1.4.1.post1+dfsg-1 [6817 kB] 348s Get:87 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sklearn all 1.4.1.post1+dfsg-1 [2261 kB] 348s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pauvre all 0.2.3-3 [52.6 kB] 348s Fetched 134 MB in 4s (30.6 MB/s) 348s Selecting previously unselected package sgml-base. 348s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69713 files and directories currently installed.) 348s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 348s Unpacking sgml-base (1.31) ... 348s Selecting previously unselected package libtcl8.6:ppc64el. 348s Preparing to unpack .../01-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 348s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 348s Selecting previously unselected package fonts-dejavu-mono. 348s Preparing to unpack .../02-fonts-dejavu-mono_2.37-8_all.deb ... 348s Unpacking fonts-dejavu-mono (2.37-8) ... 348s Selecting previously unselected package fonts-dejavu-core. 348s Preparing to unpack .../03-fonts-dejavu-core_2.37-8_all.deb ... 348s Unpacking fonts-dejavu-core (2.37-8) ... 348s Selecting previously unselected package libfontenc1:ppc64el. 348s Preparing to unpack .../04-libfontenc1_1%3a1.1.8-1_ppc64el.deb ... 348s Unpacking libfontenc1:ppc64el (1:1.1.8-1) ... 348s Selecting previously unselected package x11-common. 348s Preparing to unpack .../05-x11-common_1%3a7.7+23ubuntu2_all.deb ... 348s Unpacking x11-common (1:7.7+23ubuntu2) ... 348s Selecting previously unselected package xfonts-encodings. 348s Preparing to unpack .../06-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 348s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 348s Selecting previously unselected package xfonts-utils. 348s Preparing to unpack .../07-xfonts-utils_1%3a7.7+6build2_ppc64el.deb ... 348s Unpacking xfonts-utils (1:7.7+6build2) ... 348s Selecting previously unselected package fonts-urw-base35. 348s Preparing to unpack .../08-fonts-urw-base35_20200910-8_all.deb ... 348s Unpacking fonts-urw-base35 (20200910-8) ... 348s Selecting previously unselected package fontconfig-config. 348s Preparing to unpack .../09-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 349s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 349s Selecting previously unselected package libfontconfig1:ppc64el. 349s Preparing to unpack .../10-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 349s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 349s Selecting previously unselected package libxrender1:ppc64el. 349s Preparing to unpack .../11-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 349s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 349s Selecting previously unselected package libxft2:ppc64el. 349s Preparing to unpack .../12-libxft2_2.3.6-1_ppc64el.deb ... 349s Unpacking libxft2:ppc64el (2.3.6-1) ... 349s Selecting previously unselected package libxss1:ppc64el. 349s Preparing to unpack .../13-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 349s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 349s Selecting previously unselected package libtk8.6:ppc64el. 349s Preparing to unpack .../14-libtk8.6_8.6.14-1_ppc64el.deb ... 349s Unpacking libtk8.6:ppc64el (8.6.14-1) ... 349s Selecting previously unselected package tk8.6-blt2.5. 349s Preparing to unpack .../15-tk8.6-blt2.5_2.5.3+dfsg-7_ppc64el.deb ... 349s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 349s Selecting previously unselected package blt. 349s Preparing to unpack .../16-blt_2.5.3+dfsg-7_ppc64el.deb ... 349s Unpacking blt (2.5.3+dfsg-7) ... 349s Selecting previously unselected package fonts-dejavu-extra. 349s Preparing to unpack .../17-fonts-dejavu-extra_2.37-8_all.deb ... 349s Unpacking fonts-dejavu-extra (2.37-8) ... 349s Selecting previously unselected package fonts-lyx. 349s Preparing to unpack .../18-fonts-lyx_2.4.0~RC3-1_all.deb ... 349s Unpacking fonts-lyx (2.4.0~RC3-1) ... 349s Selecting previously unselected package libblas3:ppc64el. 349s Preparing to unpack .../19-libblas3_3.12.0-3_ppc64el.deb ... 349s Unpacking libblas3:ppc64el (3.12.0-3) ... 349s Selecting previously unselected package libpixman-1-0:ppc64el. 349s Preparing to unpack .../20-libpixman-1-0_0.42.2-1_ppc64el.deb ... 349s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 349s Selecting previously unselected package libxcb-render0:ppc64el. 349s Preparing to unpack .../21-libxcb-render0_1.15-1_ppc64el.deb ... 349s Unpacking libxcb-render0:ppc64el (1.15-1) ... 349s Selecting previously unselected package libxcb-shm0:ppc64el. 349s Preparing to unpack .../22-libxcb-shm0_1.15-1_ppc64el.deb ... 349s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 349s Selecting previously unselected package libcairo2:ppc64el. 349s Preparing to unpack .../23-libcairo2_1.18.0-1_ppc64el.deb ... 349s Unpacking libcairo2:ppc64el (1.18.0-1) ... 349s Selecting previously unselected package libdeflate0:ppc64el. 349s Preparing to unpack .../24-libdeflate0_1.19-1_ppc64el.deb ... 349s Unpacking libdeflate0:ppc64el (1.19-1) ... 349s Selecting previously unselected package libgfortran5:ppc64el. 349s Preparing to unpack .../25-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 349s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 349s Selecting previously unselected package libgomp1:ppc64el. 349s Preparing to unpack .../26-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 349s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 349s Selecting previously unselected package libgraphite2-3:ppc64el. 349s Preparing to unpack .../27-libgraphite2-3_1.3.14-2_ppc64el.deb ... 349s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 349s Selecting previously unselected package libharfbuzz0b:ppc64el. 349s Preparing to unpack .../28-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 349s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 349s Selecting previously unselected package libimagequant0:ppc64el. 349s Preparing to unpack .../29-libimagequant0_2.18.0-1_ppc64el.deb ... 349s Unpacking libimagequant0:ppc64el (2.18.0-1) ... 349s Selecting previously unselected package libjpeg-turbo8:ppc64el. 349s Preparing to unpack .../30-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 349s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 349s Selecting previously unselected package libjpeg8:ppc64el. 349s Preparing to unpack .../31-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 349s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 349s Selecting previously unselected package libjs-jquery. 349s Preparing to unpack .../32-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 349s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 349s Selecting previously unselected package libjs-jquery-ui. 349s Preparing to unpack .../33-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 349s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 349s Selecting previously unselected package liblapack3:ppc64el. 349s Preparing to unpack .../34-liblapack3_3.12.0-3_ppc64el.deb ... 349s Unpacking liblapack3:ppc64el (3.12.0-3) ... 349s Selecting previously unselected package liblbfgsb0:ppc64el. 349s Preparing to unpack .../35-liblbfgsb0_3.0+dfsg.4-1_ppc64el.deb ... 349s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 349s Selecting previously unselected package liblcms2-2:ppc64el. 349s Preparing to unpack .../36-liblcms2-2_2.14-2_ppc64el.deb ... 349s Unpacking liblcms2-2:ppc64el (2.14-2) ... 349s Selecting previously unselected package liblerc4:ppc64el. 349s Preparing to unpack .../37-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 349s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 349s Selecting previously unselected package libqhull-r8.0:ppc64el. 349s Preparing to unpack .../38-libqhull-r8.0_2020.2-6_ppc64el.deb ... 349s Unpacking libqhull-r8.0:ppc64el (2020.2-6) ... 349s Selecting previously unselected package libraqm0:ppc64el. 349s Preparing to unpack .../39-libraqm0_0.10.1-1_ppc64el.deb ... 349s Unpacking libraqm0:ppc64el (0.10.1-1) ... 349s Selecting previously unselected package libsharpyuv0:ppc64el. 349s Preparing to unpack .../40-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 349s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 349s Selecting previously unselected package libjbig0:ppc64el. 349s Preparing to unpack .../41-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 349s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 349s Selecting previously unselected package libwebp7:ppc64el. 349s Preparing to unpack .../42-libwebp7_1.3.2-0.4_ppc64el.deb ... 349s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 349s Selecting previously unselected package libtiff6:ppc64el. 349s Preparing to unpack .../43-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 349s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 349s Selecting previously unselected package libwebpdemux2:ppc64el. 349s Preparing to unpack .../44-libwebpdemux2_1.3.2-0.4_ppc64el.deb ... 349s Unpacking libwebpdemux2:ppc64el (1.3.2-0.4) ... 349s Selecting previously unselected package libwebpmux3:ppc64el. 349s Preparing to unpack .../45-libwebpmux3_1.3.2-0.4_ppc64el.deb ... 349s Unpacking libwebpmux3:ppc64el (1.3.2-0.4) ... 349s Selecting previously unselected package libxslt1.1:ppc64el. 349s Preparing to unpack .../46-libxslt1.1_1.1.39-0exp1_ppc64el.deb ... 349s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1) ... 349s Selecting previously unselected package python-matplotlib-data. 349s Preparing to unpack .../47-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 349s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 350s Selecting previously unselected package python3-appdirs. 350s Preparing to unpack .../48-python3-appdirs_1.4.4-4_all.deb ... 350s Unpacking python3-appdirs (1.4.4-4) ... 350s Selecting previously unselected package python3-numpy. 350s Preparing to unpack .../49-python3-numpy_1%3a1.24.2-2_ppc64el.deb ... 350s Unpacking python3-numpy (1:1.24.2-2) ... 350s Selecting previously unselected package python3-tk:ppc64el. 350s Preparing to unpack .../50-python3-tk_3.11.5-1_ppc64el.deb ... 350s Unpacking python3-tk:ppc64el (3.11.5-1) ... 350s Selecting previously unselected package python3-pil.imagetk:ppc64el. 350s Preparing to unpack .../51-python3-pil.imagetk_10.2.0-1_ppc64el.deb ... 350s Unpacking python3-pil.imagetk:ppc64el (10.2.0-1) ... 350s Selecting previously unselected package libopenjp2-7:ppc64el. 350s Preparing to unpack .../52-libopenjp2-7_2.5.0-2_ppc64el.deb ... 350s Unpacking libopenjp2-7:ppc64el (2.5.0-2) ... 350s Selecting previously unselected package python3-pil:ppc64el. 350s Preparing to unpack .../53-python3-pil_10.2.0-1_ppc64el.deb ... 350s Unpacking python3-pil:ppc64el (10.2.0-1) ... 350s Selecting previously unselected package python3-cairo. 350s Preparing to unpack .../54-python3-cairo_1.25.1-2_ppc64el.deb ... 350s Unpacking python3-cairo (1.25.1-2) ... 350s Selecting previously unselected package python3-freetype. 350s Preparing to unpack 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python3-brotli. 350s Preparing to unpack .../61-python3-brotli_1.1.0-2_ppc64el.deb ... 350s Unpacking python3-brotli (1.1.0-2) ... 350s Selecting previously unselected package python3-contourpy. 350s Preparing to unpack .../62-python3-contourpy_1.0.7-1build2_ppc64el.deb ... 350s Unpacking python3-contourpy (1.0.7-1build2) ... 350s Selecting previously unselected package python3-cycler. 350s Preparing to unpack .../63-python3-cycler_0.11.0-2_all.deb ... 350s Unpacking python3-cycler (0.11.0-2) ... 350s Selecting previously unselected package python3-dateutil. 350s Preparing to unpack .../64-python3-dateutil_2.8.2-3_all.deb ... 350s Unpacking python3-dateutil (2.8.2-3) ... 350s Selecting previously unselected package python3-decorator. 350s Preparing to unpack .../65-python3-decorator_5.1.1-5_all.deb ... 350s Unpacking python3-decorator (5.1.1-5) ... 350s Selecting previously unselected package python3-scipy. 350s Preparing to unpack .../66-python3-scipy_1.11.4-6_ppc64el.deb ... 350s Unpacking python3-scipy (1.11.4-6) ... 351s Selecting previously unselected package python3-ufolib2. 351s Preparing to unpack .../67-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 351s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 351s Selecting previously unselected package python3-mpmath. 351s Preparing to unpack .../68-python3-mpmath_1.2.1-3_all.deb ... 351s Unpacking python3-mpmath (1.2.1-3) ... 351s Selecting previously unselected package python3-sympy. 351s Preparing to unpack .../69-python3-sympy_1.12-7_all.deb ... 351s Unpacking python3-sympy (1.12-7) ... 352s Selecting previously unselected package python3-fs. 352s Preparing to unpack .../70-python3-fs_2.4.16-3_all.deb ... 352s Unpacking python3-fs (2.4.16-3) ... 352s Selecting previously unselected package python3-lxml:ppc64el. 352s Preparing to unpack .../71-python3-lxml_5.1.0-1_ppc64el.deb ... 352s Unpacking python3-lxml:ppc64el (5.1.0-1) ... 352s Selecting previously unselected package python3-lz4. 352s Preparing to unpack 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python3-kiwisolver (1.4.4-2) ... 352s Selecting previously unselected package python3-packaging. 352s Preparing to unpack .../78-python3-packaging_23.2-1_all.deb ... 352s Unpacking python3-packaging (23.2-1) ... 352s Selecting previously unselected package python3-matplotlib. 352s Preparing to unpack .../79-python3-matplotlib_3.6.3-1ubuntu3_ppc64el.deb ... 352s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ... 353s Selecting previously unselected package python3-nanoget-examples. 353s Preparing to unpack .../80-python3-nanoget-examples_1.19.3-1_all.deb ... 353s Unpacking python3-nanoget-examples (1.19.3-1) ... 353s Selecting previously unselected package python3-pandas-lib:ppc64el. 353s Preparing to unpack .../81-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_ppc64el.deb ... 353s Unpacking python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ... 353s Selecting previously unselected package python3-pandas. 353s Preparing to unpack .../82-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ... 353s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ... 353s Selecting previously unselected package python3-threadpoolctl. 353s Preparing to unpack .../83-python3-threadpoolctl_3.1.0-1_all.deb ... 353s Unpacking python3-threadpoolctl (3.1.0-1) ... 353s Selecting previously unselected package python3-sklearn-lib:ppc64el. 353s Preparing to unpack .../84-python3-sklearn-lib_1.4.1.post1+dfsg-1_ppc64el.deb ... 353s Unpacking python3-sklearn-lib:ppc64el (1.4.1.post1+dfsg-1) ... 354s Selecting previously unselected package python3-sklearn. 354s Preparing to unpack .../85-python3-sklearn_1.4.1.post1+dfsg-1_all.deb ... 354s Unpacking python3-sklearn (1.4.1.post1+dfsg-1) ... 354s Selecting previously unselected package python3-pauvre. 354s Preparing to unpack .../86-python3-pauvre_0.2.3-3_all.deb ... 354s Unpacking python3-pauvre (0.2.3-3) ... 354s Selecting previously unselected package autopkgtest-satdep. 354s Preparing to unpack .../87-1-autopkgtest-satdep.deb ... 354s Unpacking autopkgtest-satdep (0) ... 354s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 354s Setting up liblcms2-2:ppc64el (2.14-2) ... 354s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 354s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 354s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 354s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 354s Setting up python3-joblib (1.3.2-1) ... 354s Setting up python3-lz4 (4.0.2+dfsg-1build2) ... 354s Setting up libxcb-render0:ppc64el (1.15-1) ... 354s Setting up python3-unicodedata2 (15.1.0+ds-1) ... 354s Setting up fonts-lyx (2.4.0~RC3-1) ... 354s Setting up python3-threadpoolctl (3.1.0-1) ... 354s Setting up x11-common (1:7.7+23ubuntu2) ... 355s Setting up libdeflate0:ppc64el (1.19-1) ... 355s Setting up libqhull-r8.0:ppc64el (2020.2-6) ... 355s Setting up libxcb-shm0:ppc64el (1.15-1) ... 355s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 355s Setting up python3-freetype (2.4.0-1) ... 355s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 355s Setting up unicode-data (15.1.0-1) ... 355s Setting up python3-decorator (5.1.1-5) ... 355s Setting up libfontenc1:ppc64el (1:1.1.8-1) ... 355s Setting up libblas3:ppc64el (3.12.0-3) ... 355s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 355s Setting up python3-packaging (23.2-1) ... 355s Setting up python3-brotli (1.1.0-2) ... 356s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 356s Setting up python3-cycler (0.11.0-2) ... 356s Setting up libimagequant0:ppc64el (2.18.0-1) ... 356s Setting up fonts-dejavu-mono (2.37-8) ... 356s Setting up python3-kiwisolver (1.4.4-2) ... 356s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 356s Setting up fonts-dejavu-core (2.37-8) ... 356s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 356s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 356s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 356s Setting up fonts-dejavu-extra (2.37-8) ... 356s Setting up libxslt1.1:ppc64el (1.1.39-0exp1) ... 356s Setting up python3-nanoget-examples (1.19.3-1) ... 356s Setting up libopenjp2-7:ppc64el (2.5.0-2) ... 356s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 356s Setting up python3-dateutil (2.8.2-3) ... 356s Setting up sgml-base (1.31) ... 356s Setting up libxss1:ppc64el (1:1.2.3-1build2) ... 356s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 356s Setting up python3-mpmath (1.2.1-3) ... 356s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... 356s Setting up libwebpmux3:ppc64el (1.3.2-0.4) ... 356s Setting up python3-appdirs (1.4.4-4) ... 357s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 357s Setting up python3-sympy (1.12-7) ... 362s Setting up liblapack3:ppc64el (3.12.0-3) ... 362s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 362s Setting up 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libcairo2:ppc64el (1.18.0-1) ... 368s Setting up python3-pil:ppc64el (10.2.0-1) ... 369s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 373s Setting up python3-sklearn (1.4.1.post1+dfsg-1) ... 375s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... 375s Setting up python3-cairo (1.25.1-2) ... 375s Setting up blt (2.5.3+dfsg-7) ... 375s Setting up python3-tk:ppc64el (3.11.5-1) ... 376s Setting up python3-pil.imagetk:ppc64el (10.2.0-1) ... 376s Setting up python3-rlpycairo (0.3.0-3) ... 376s Setting up python3-reportlab (4.1.0-1) ... 377s Setting up python3-fonttools (4.46.0-1) ... 377s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 378s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 379s Processing triggers for libc-bin (2.39-0ubuntu6) ... 379s Processing triggers for man-db (2.12.0-3) ... 380s Processing triggers for sgml-base (1.31) ... 380s Setting up w3c-sgml-lib (1.3-3) ... 407s Setting up python3-biopython (1.81+dfsg-3) ... 408s Setting up python3-pauvre (0.2.3-3) ... 408s /usr/lib/python3/dist-packages/pauvre/gfftools.py:178: SyntaxWarning: invalid escape sequence '\ ' 408s """ plots a lff patch 408s /usr/lib/python3/dist-packages/pauvre/gfftools.py:259: SyntaxWarning: invalid escape sequence '\ ' 408s """ plots a rff patch 408s /usr/lib/python3/dist-packages/pauvre/synplot.py:531: SyntaxWarning: invalid escape sequence '\i' 408s seq_name = "$\it{{{0}}}$".format(gff.species) 408s Setting up autopkgtest-satdep (0) ... 411s (Reading database ... 81426 files and directories currently installed.) 411s Removing autopkgtest-satdep (0) ... 412s autopkgtest [17:07:41]: test run-unit-test: [----------------------- 412s 412s #git clone https://github.com/wdecoster/nanotest.git 412s 412s pauvre -h 412s usage: pauvre [-h] [-v] 412s {browser,custommargin,marginplot,redwood,stats,synplot} ... 412s 412s options: 412s -h, --help show this help message and exit 412s -v, --version Installed pauvre version 412s 412s [sub-commands]: 412s {browser,custommargin,marginplot,redwood,stats,synplot} 412s browser an adaptable genome browser with various track types 412s custommargin plot custom marginal histograms of tab-delimited files 412s marginplot plot a marginal histogram of a fastq file 412s redwood make a redwood plot from a bam file 412s stats outputs stats from a fastq file 412s synplot make a synteny plot from a gff file, protein 412s alignment, and partition file 412s 412s pauvre marginplot -h 412s usage: pauvre marginplot [-h] [-q] [--dpi dpi] [-f FASTQ] 412s [--fileform STRING [STRING ...]] 412s [--filt_maxlen FILT_MAXLEN] 412s [--filt_maxqual FILT_MAXQUAL] 412s [--filt_minlen FILT_MINLEN] 412s [--filt_minqual FILT_MINQUAL] [--kmerdf KMERDF] [-n] 412s [--no_timestamp] [-o BASENAME] 412s [--plot_maxlen PLOT_MAXLEN] 412s [--plot_maxqual PLOT_MAXQUAL] 412s [--plot_minlen PLOT_MINLEN] 412s [--plot_minqual PLOT_MINQUAL] [--lengthbin LENGTHBIN] 412s [--qualbin QUALBIN] [-t TITLE] [-y] 412s 412s options: 412s -h, --help show this help message and exit 412s -q, --quiet Do not output warnings to stderr 412s --dpi dpi Change the dpi from the default 600 if you need it 412s higher 412s -f FASTQ, --fastq FASTQ 412s The input FASTQ file. 412s --fileform STRING [STRING ...] 412s Which output format would you like? Def.=png 412s --filt_maxlen FILT_MAXLEN 412s This sets the max read length filter reads. 412s --filt_maxqual FILT_MAXQUAL 412s This sets the max mean read quality to filter reads. 412s --filt_minlen FILT_MINLEN 412s This sets the min read length to filter reads. 412s --filt_minqual FILT_MINQUAL 412s This sets the min mean read quality to filter reads. 412s --kmerdf KMERDF Pass the filename of a data matrix if you would like 412s to plot read length versus number of kmers in that 412s read. The data matrix is a tab-separated text file 412s with columns "id length numks and kmers", where: 412s = read id = the length of the read = 412s the number of canonical kmers in the read = a 412s list representation of kmers ie ['GAT', 'GTA'] 412s -n, --no_transparent Specify this option if you don't want a transparent 412s background. Default is on. 412s --no_timestamp Turn off time stamps in the filename output. 412s -o BASENAME, --output_base_name BASENAME 412s Specify a base name for the output file(s). The input 412s file base name is the default. 412s --plot_maxlen PLOT_MAXLEN 412s Sets the maximum viewing area in the length dimension. 412s --plot_maxqual PLOT_MAXQUAL 412s Sets the maximum viewing area in the quality 412s dimension. 412s --plot_minlen PLOT_MINLEN 412s Sets the minimum viewing area in the length dimension. 412s --plot_minqual PLOT_MINQUAL 412s Sets the minimum viewing area in the quality 412s dimension. 412s --lengthbin LENGTHBIN 412s This sets the bin size to use for length. 412s --qualbin QUALBIN This sets the bin size to use for quality 412s -t TITLE, --title TITLE 412s This sets the title for the whole plot. Use --title 412s "Crustacean's DNA read quality" if you need single 412s quote or apostrophe inside title. 412s -y, --add-yaxes Add Y-axes to both marginal histograms. 412s pauvre marginplot -f nanotest/reads.fastq.gz 415s Keeping reads that satisfy: length >= 0 and meanQual >= 0 415s # Fastq stats for reads.fastq.gz, reads >= 0bp 415s numReads: 371 415s %totalNumReads: 100.00 415s numBasepairs: 8611871 415s %totalBasepairs: 100.00 415s meanLen: 23212.590296495957 415s medianLen: 9390.0 415s minLen: 212 415s maxLen: 393431 415s N50: 60395 415s L50: 36 415s 415s # Fastq stats for reads.fastq.gz, reads >= 1000bp 415s numReads: 349 415s %totalNumReads: 94.07 415s numBasepairs: 8599196 415s %totalBasepairs: 99.85 415s meanLen: 24639.530085959886 415s medianLen: 10585.0 415s minLen: 1009 415s maxLen: 393431 415s N50: 60395 415s L50: 36 415s 415s # Fastq stats for reads.fastq.gz, reads >= 5000bp 415s numReads: 246 415s %totalNumReads: 66.31 415s numBasepairs: 8296771 415s %totalBasepairs: 96.34 415s meanLen: 33726.71138211382 415s medianLen: 17146.0 415s minLen: 5082 415s maxLen: 393431 415s N50: 61111 415s L50: 33 415s 415s # Fastq stats for reads.fastq.gz, reads >= 10000bp 415s numReads: 178 415s %totalNumReads: 47.98 415s numBasepairs: 7817574 415s %totalBasepairs: 90.78 415s meanLen: 43918.95505617977 415s medianLen: 25216.5 415s minLen: 10192 415s maxLen: 393431 415s N50: 67193 415s L50: 30 415s 415s 415s Basepairs >= bin by mean PHRED and length 415s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 415s 0 8611871 7722755 6661156 4720156 2513562 895545 11781 0 415s 250 8611434 7722543 6660944 4719944 2513350 895333 11781 0 415s 500 8608955 7720456 6659643 4718643 2512881 894864 11781 0 415s 750 8604011 7718007 6657705 4717235 2512207 894190 11781 0 415s 1000 8599196 7714763 6654461 4713991 2509728 892515 11781 0 415s 1500 8589389 7708620 6650781 4710311 2507384 892515 11781 0 415s 2000 8554914 7676064 6618225 4682910 2492830 889226 11781 0 415s 2500 8523841 7647182 6591756 4667150 2483798 884829 11781 0 415s 3000 8491143 7627966 6575417 4653398 2480966 884829 11781 0 415s 3500 8446296 7586240 6536848 4617937 2451870 872464 11781 0 415s 4000 8394095 7534039 6484647 4572910 2432856 872464 11781 0 415s 4500 8344217 7488243 6447269 4556363 2424476 864084 11781 0 415s 5000 8296771 7440797 6409287 4528136 2405499 859337 11781 0 415s 5500 8244099 7398741 6367231 4507086 2400051 853889 6333 0 415s 6000 8187360 7347687 6316177 4456032 2377109 842317 6333 0 415s 6500 8118352 7291309 6272099 4418146 2357938 829533 0 0 415s 7000 8077764 7257349 6244869 4404380 2351024 829533 0 0 415s 7500 8034618 7214203 6209041 4383008 2336942 815451 0 0 415s 8000 7988407 7175507 6170345 4351953 2313576 807622 0 0 415s 8500 7938916 7142561 6137399 4327467 2297332 807622 0 0 415s 9000 7912979 7116624 6119996 4310064 2288474 798764 0 0 415s 9500 7857026 7060671 6091684 4300567 2278977 798764 0 0 415s 10000 7817574 7021219 6072011 4290587 2268997 798764 0 0 415s 11000 7722033 6946925 6008613 4237810 2237463 798764 0 0 415s 12000 7618324 6854352 5928031 4191306 2202157 775443 0 0 415s 13000 7417005 6678203 5790564 4116603 2177804 763380 0 0 415s 14000 7335708 6610502 5736644 4062683 2150377 735953 0 0 415s 15000 7277461 6552255 5678397 4004436 2106447 721422 0 0 415s 16000 7216282 6506170 5632312 3973573 2106447 721422 0 0 415s 17000 7099358 6389246 5532373 3890471 2056275 704705 0 0 415s 18000 7028757 6318645 5461772 3819870 1985674 687130 0 0 415s 19000 6954493 6262568 5405695 3782448 1967023 668479 0 0 415s 20000 6875713 6183788 5346904 3743003 1967023 668479 0 0 415s 21000 6752924 6081496 5264907 3681828 1905848 627955 0 0 415s 22000 6645406 6017177 5200588 3639354 1863374 606840 0 0 415s 23000 6555755 5927526 5110937 3571882 1818321 584599 0 0 415s 24000 6509051 5880822 5064233 3525178 1818321 584599 0 0 415s 25000 6410673 5782444 4989966 3475825 1793534 584599 0 0 415s 26000 6360240 5732011 4964634 3475825 1793534 584599 0 0 415s 27000 6254597 5626368 4885462 3423050 1740759 558501 0 0 415s 28000 6171485 5543256 4802350 3395216 1712925 530667 0 0 415s 29000 6029142 5400913 4688628 3281494 1684138 501880 0 0 415s 30000 5882027 5253798 4541513 3163672 1654590 501880 0 0 415s 31000 5821490 5193261 4480976 3103135 1624358 471648 0 0 415s 32000 5758286 5130057 4417772 3039931 1592823 471648 0 0 415s 33000 5726083 5097854 4385569 3007728 1592823 471648 0 0 415s 34000 5726083 5097854 4385569 3007728 1592823 471648 0 0 415s 35000 5657458 5063791 4351506 2973665 1592823 471648 0 0 415s 36000 5550544 4956877 4315610 2937769 1592823 471648 0 0 415s 37000 5440987 4847320 4278774 2900933 1555987 471648 0 0 415s 38000 5440987 4847320 4278774 2900933 1555987 471648 0 0 415s 39000 5402415 4847320 4278774 2900933 1555987 471648 0 0 415s 40000 5402415 4847320 4278774 2900933 1555987 471648 0 0 415s 45000 5193644 4721367 4194028 2860812 1555987 471648 0 0 415s 50000 4960568 4534952 4007613 2674397 1508336 423997 0 0 415s 55000 4750881 4325265 3797926 2464710 1352765 320689 0 0 415s 60000 4344431 3918815 3450507 2293175 1181230 263588 0 0 415s 65000 4101203 3736226 3267918 2171697 1120835 203193 0 0 415s 70000 3833468 3535098 3135269 2039048 1120835 203193 0 0 415s 75000 3470049 3246162 2846333 1893802 975589 203193 0 0 415s 80000 3311125 3087238 2766576 1814045 975589 203193 0 0 415s 85000 3228980 3005093 2684431 1814045 975589 203193 0 0 415s 90000 2967292 2829470 2508808 1726901 888445 203193 0 0 415s 95000 2967292 2829470 2508808 1726901 888445 203193 0 0 415s 100000 2674343 2536521 2215859 1530166 691710 105463 0 0 415s 120000 2232740 2094918 1774256 1189896 468021 0 0 0 415s 140000 1699582 1699582 1378920 930176 341725 0 0 0 415s 160000 1699582 1699582 1378920 930176 341725 0 0 0 415s 180000 1699582 1699582 1378920 930176 341725 0 0 0 415s 200000 1504562 1504562 1183900 735156 341725 0 0 0 415s 220000 1504562 1504562 1183900 735156 341725 0 0 0 415s 240000 1055818 1055818 735156 735156 341725 0 0 0 415s 260000 1055818 1055818 735156 735156 341725 0 0 0 415s 280000 1055818 1055818 735156 735156 341725 0 0 0 415s 300000 1055818 1055818 735156 735156 341725 0 0 0 415s 320000 1055818 1055818 735156 735156 341725 0 0 0 415s 340000 735156 735156 735156 735156 341725 0 0 0 415s 360000 393431 393431 393431 393431 0 0 0 0 415s 380000 393431 393431 393431 393431 0 0 0 0 415s 400000 0 0 0 0 0 0 0 0 415s 415s Number of reads >= bin by mean Phred+Len 415s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 415s 0 371 321 277 207 114 49 2 0 415s 250 369 320 276 206 113 48 2 0 415s 500 363 315 273 203 112 47 2 0 415s 750 355 311 270 201 111 46 2 0 415s 1000 349 307 266 197 108 44 2 0 415s 1500 341 302 263 194 106 44 2 0 415s 2000 322 284 245 179 98 42 2 0 415s 2500 308 271 233 172 94 40 2 0 415s 3000 296 264 227 167 93 40 2 0 415s 3500 282 251 215 156 84 36 2 0 415s 4000 268 237 201 144 79 36 2 0 415s 4500 256 226 192 140 77 34 2 0 415s 5000 246 216 184 134 73 33 2 0 415s 5500 236 208 176 130 72 32 1 0 415s 6000 226 199 167 121 68 30 1 0 415s 6500 215 190 160 115 65 28 0 0 415s 7000 209 185 156 113 64 28 0 0 415s 7500 203 179 151 110 62 26 0 0 415s 8000 197 174 146 106 59 25 0 0 415s 8500 191 170 142 103 57 25 0 0 415s 9000 188 167 140 101 56 24 0 0 415s 9500 182 161 137 100 55 24 0 0 415s 10000 178 157 135 99 54 24 0 0 415s 11000 169 150 129 94 51 24 0 0 415s 12000 160 142 122 90 48 22 0 0 415s 13000 144 128 111 84 46 21 0 0 415s 14000 138 123 107 80 44 19 0 0 415s 15000 134 119 103 76 41 18 0 0 415s 16000 130 116 100 74 41 18 0 0 415s 17000 123 109 94 69 38 17 0 0 415s 18000 119 105 90 65 34 16 0 0 415s 19000 115 102 87 63 33 15 0 0 415s 20000 111 98 84 61 33 15 0 0 415s 21000 105 93 80 58 30 13 0 0 415s 22000 100 90 77 56 28 12 0 0 415s 23000 96 86 73 53 26 11 0 0 415s 24000 94 84 71 51 26 11 0 0 415s 25000 90 80 68 49 25 11 0 0 415s 26000 88 78 67 49 25 11 0 0 415s 27000 84 74 64 47 23 10 0 0 415s 28000 81 71 61 46 22 9 0 0 415s 29000 76 66 57 42 21 8 0 0 415s 30000 71 61 52 38 20 8 0 0 415s 31000 69 59 50 36 19 7 0 0 415s 32000 67 57 48 34 18 7 0 0 415s 33000 66 56 47 33 18 7 0 0 415s 34000 66 56 47 33 18 7 0 0 415s 35000 64 55 46 32 18 7 0 0 415s 36000 61 52 45 31 18 7 0 0 415s 37000 58 49 44 30 17 7 0 0 415s 38000 58 49 44 30 17 7 0 0 415s 39000 57 49 44 30 17 7 0 0 415s 40000 57 49 44 30 17 7 0 0 415s 45000 52 46 42 29 17 7 0 0 415s 50000 47 42 38 25 16 6 0 0 415s 55000 43 38 34 21 13 4 0 0 415s 60000 36 31 28 18 10 3 0 0 415s 65000 32 28 25 16 9 2 0 0 415s 70000 28 25 23 14 9 2 0 0 415s 75000 23 21 19 12 7 2 0 0 415s 80000 21 19 18 11 7 2 0 0 415s 85000 20 18 17 11 7 2 0 0 415s 90000 17 16 15 10 6 2 0 0 415s 95000 17 16 15 10 6 2 0 0 415s 100000 14 13 12 8 4 1 0 0 415s 120000 10 9 8 5 2 0 0 0 415s 140000 6 6 5 3 1 0 0 0 415s 160000 6 6 5 3 1 0 0 0 415s 180000 6 6 5 3 1 0 0 0 415s 200000 5 5 4 2 1 0 0 0 415s 220000 5 5 4 2 1 0 0 0 415s 240000 3 3 2 2 1 0 0 0 415s 260000 3 3 2 2 1 0 0 0 415s 280000 3 3 2 2 1 0 0 0 415s 300000 3 3 2 2 1 0 0 0 415s 320000 3 3 2 2 1 0 0 0 415s 340000 2 2 2 2 1 0 0 0 415s 360000 1 1 1 1 0 0 0 0 415s 380000 1 1 1 1 0 0 0 0 415s 400000 0 0 0 0 0 0 0 0 416s plotting in the following window: 416s 0 <= Q-score (x-axis) <= 14.0 416s 0 <= length (y-axis) <= 223383 417s 417s pauvre marginplot -f nanotest/reads.fastq.gz -t "my title" --filt_maxlen 30000 419s Keeping reads that satisfy: length >= 0 and meanQual >= 0 and length <= 30000 420s plotting in the following window: 420s 0 <= Q-score (x-axis) <= 14.0 420s 0 <= length (y-axis) <= 29294 421s # Fastq stats for reads.fastq.gz, reads >= 0bp 421s numReads: 300 421s %totalNumReads: 100.00 421s numBasepairs: 2729844 421s %totalBasepairs: 100.00 421s meanLen: 9099.48 421s medianLen: 6204.5 421s minLen: 212 421s maxLen: 29590 421s N50: 15222 421s L50: 61 421s 421s # Fastq stats for reads.fastq.gz, reads >= 1000bp 421s numReads: 278 421s %totalNumReads: 92.67 421s numBasepairs: 2717169 421s %totalBasepairs: 99.54 421s meanLen: 9773.989208633093 421s medianLen: 6910.0 421s minLen: 1009 421s maxLen: 29590 421s N50: 15222 421s L50: 61 421s 421s # Fastq stats for reads.fastq.gz, reads >= 5000bp 421s numReads: 175 421s %totalNumReads: 58.33 421s numBasepairs: 2414744 421s %totalBasepairs: 88.46 421s meanLen: 13798.537142857143 421s medianLen: 12063.0 421s minLen: 5082 421s maxLen: 29590 421s N50: 17307 421s L50: 52 421s 421s # Fastq stats for reads.fastq.gz, reads >= 10000bp 421s numReads: 107 421s %totalNumReads: 35.67 421s numBasepairs: 1935547 421s %totalBasepairs: 70.90 421s meanLen: 18089.22429906542 421s medianLen: 16881.0 421s minLen: 10192 421s maxLen: 29590 421s N50: 20295 421s L50: 39 421s 421s 421s Basepairs >= bin by mean PHRED and length 421s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 421s 0 2729844 2468957 2119643 1556484 858972 393665 11781 0 421s 250 2729407 2468745 2119431 1556272 858760 393453 11781 0 421s 500 2726928 2466658 2118130 1554971 858291 392984 11781 0 421s 750 2721984 2464209 2116192 1553563 857617 392310 11781 0 421s 1000 2717169 2460965 2112948 1550319 855138 390635 11781 0 421s 1500 2707362 2454822 2109268 1546639 852794 390635 11781 0 421s 2000 2672887 2422266 2076712 1519238 838240 387346 11781 0 421s 2500 2641814 2393384 2050243 1503478 829208 382949 11781 0 421s 3000 2609116 2374168 2033904 1489726 826376 382949 11781 0 421s 3500 2564269 2332442 1995335 1454265 797280 370584 11781 0 421s 4000 2512068 2280241 1943134 1409238 778266 370584 11781 0 421s 4500 2462190 2234445 1905756 1392691 769886 362204 11781 0 421s 5000 2414744 2186999 1867774 1364464 750909 357457 11781 0 421s 5500 2362072 2144943 1825718 1343414 745461 352009 6333 0 421s 6000 2305333 2093889 1774664 1292360 722519 340437 6333 0 421s 6500 2236325 2037511 1730586 1254474 703348 327653 0 0 421s 7000 2195737 2003551 1703356 1240708 696434 327653 0 0 421s 7500 2152591 1960405 1667528 1219336 682352 313571 0 0 421s 8000 2106380 1921709 1628832 1188281 658986 305742 0 0 421s 8500 2056889 1888763 1595886 1163795 642742 305742 0 0 421s 9000 2030952 1862826 1578483 1146392 633884 296884 0 0 421s 9500 1974999 1806873 1550171 1136895 624387 296884 0 0 421s 10000 1935547 1767421 1530498 1126915 614407 296884 0 0 421s 11000 1840006 1693127 1467100 1074138 582873 296884 0 0 421s 12000 1736297 1600554 1386518 1027634 547567 273563 0 0 421s 13000 1534978 1424405 1249051 952931 523214 261500 0 0 421s 14000 1453681 1356704 1195131 899011 495787 234073 0 0 421s 15000 1395434 1298457 1136884 840764 451857 219542 0 0 421s 16000 1334255 1252372 1090799 809901 451857 219542 0 0 421s 17000 1217331 1135448 990860 726799 401685 202825 0 0 421s 18000 1146730 1064847 920259 656198 331084 185250 0 0 421s 19000 1072466 1008770 864182 618776 312433 166599 0 0 421s 20000 993686 929990 805391 579331 312433 166599 0 0 421s 21000 870897 827698 723394 518156 251258 126075 0 0 421s 22000 763379 763379 659075 475682 208784 104960 0 0 421s 23000 673728 673728 569424 408210 163731 82719 0 0 421s 24000 627024 627024 522720 361506 163731 82719 0 0 421s 25000 528646 528646 448453 312153 138944 82719 0 0 421s 26000 478213 478213 423121 312153 138944 82719 0 0 421s 27000 372570 372570 343949 259378 86169 56621 0 0 421s 28000 289458 289458 260837 231544 58335 28787 0 0 421s 29000 147115 147115 147115 117822 29548 0 0 0 421s 30000 0 0 0 0 0 0 0 0 421s 421s Number of reads >= bin by mean Phred+Len 421s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 421s 0 300 260 225 169 94 41 2 0 421s 250 298 259 224 168 93 40 2 0 421s 500 292 254 221 165 92 39 2 0 421s 750 284 250 218 163 91 38 2 0 421s 1000 278 246 214 159 88 36 2 0 421s 1500 270 241 211 156 86 36 2 0 421s 2000 251 223 193 141 78 34 2 0 421s 2500 237 210 181 134 74 32 2 0 421s 3000 225 203 175 129 73 32 2 0 421s 3500 211 190 163 118 64 28 2 0 421s 4000 197 176 149 106 59 28 2 0 421s 4500 185 165 140 102 57 26 2 0 421s 5000 175 155 132 96 53 25 2 0 421s 5500 165 147 124 92 52 24 1 0 421s 6000 155 138 115 83 48 22 1 0 421s 6500 144 129 108 77 45 20 0 0 421s 7000 138 124 104 75 44 20 0 0 421s 7500 132 118 99 72 42 18 0 0 421s 8000 126 113 94 68 39 17 0 0 421s 8500 120 109 90 65 37 17 0 0 421s 9000 117 106 88 63 36 16 0 0 421s 9500 111 100 85 62 35 16 0 0 421s 10000 107 96 83 61 34 16 0 0 421s 11000 98 89 77 56 31 16 0 0 421s 12000 89 81 70 52 28 14 0 0 421s 13000 73 67 59 46 26 13 0 0 421s 14000 67 62 55 42 24 11 0 0 421s 15000 63 58 51 38 21 10 0 0 421s 16000 59 55 48 36 21 10 0 0 421s 17000 52 48 42 31 18 9 0 0 421s 18000 48 44 38 27 14 8 0 0 421s 19000 44 41 35 25 13 7 0 0 421s 20000 40 37 32 23 13 7 0 0 421s 21000 34 32 28 20 10 5 0 0 421s 22000 29 29 25 18 8 4 0 0 421s 23000 25 25 21 15 6 3 0 0 421s 24000 23 23 19 13 6 3 0 0 421s 25000 19 19 16 11 5 3 0 0 421s 26000 17 17 15 11 5 3 0 0 421s 27000 13 13 12 9 3 2 0 0 421s 28000 10 10 9 8 2 1 0 0 421s 29000 5 5 5 4 1 0 0 0 421s 30000 0 0 0 0 0 0 0 0 421s 421s pauvre marginplot -f nanotest/reads.fastq.gz -y --filt_minqual 7 --fileform svg 423s Keeping reads that satisfy: length >= 0 and meanQual >= 7.0 424s # Fastq stats for reads.fastq.gz, reads >= 0bp 424s numReads: 371 424s %totalNumReads: 100.00 424s numBasepairs: 8611871 424s %totalBasepairs: 100.00 424s meanLen: 23212.590296495957 424s medianLen: 9390.0 424s minLen: 212 424s maxLen: 393431 424s N50: 60395 424s L50: 36 424s 424s # Fastq stats for reads.fastq.gz, reads >= 1000bp 424s numReads: 349 424s %totalNumReads: 94.07 424s numBasepairs: 8599196 424s %totalBasepairs: 99.85 424s meanLen: 24639.530085959886 424s medianLen: 10585.0 424s minLen: 1009 424s maxLen: 393431 424s N50: 60395 424s L50: 36 424s 424s # Fastq stats for reads.fastq.gz, reads >= 5000bp 424s numReads: 246 424s %totalNumReads: 66.31 424s numBasepairs: 8296771 424s %totalBasepairs: 96.34 424s meanLen: 33726.71138211382 424s medianLen: 17146.0 424s minLen: 5082 424s maxLen: 393431 424s N50: 61111 424s L50: 33 424s 424s # Fastq stats for reads.fastq.gz, reads >= 10000bp 424s numReads: 178 424s %totalNumReads: 47.98 424s numBasepairs: 7817574 424s %totalBasepairs: 90.78 424s meanLen: 43918.95505617977 424s medianLen: 25216.5 424s minLen: 10192 424s maxLen: 393431 424s N50: 67193 424s L50: 30 424s 424s 424s Basepairs >= bin by mean PHRED and length 424s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 424s 0 8611871 7722755 6661156 4720156 2513562 895545 11781 0 424s 250 8611434 7722543 6660944 4719944 2513350 895333 11781 0 424s 500 8608955 7720456 6659643 4718643 2512881 894864 11781 0 424s 750 8604011 7718007 6657705 4717235 2512207 894190 11781 0 424s 1000 8599196 7714763 6654461 4713991 2509728 892515 11781 0 424s 1500 8589389 7708620 6650781 4710311 2507384 892515 11781 0 424s 2000 8554914 7676064 6618225 4682910 2492830 889226 11781 0 424s 2500 8523841 7647182 6591756 4667150 2483798 884829 11781 0 424s 3000 8491143 7627966 6575417 4653398 2480966 884829 11781 0 424s 3500 8446296 7586240 6536848 4617937 2451870 872464 11781 0 424s 4000 8394095 7534039 6484647 4572910 2432856 872464 11781 0 424s 4500 8344217 7488243 6447269 4556363 2424476 864084 11781 0 424s 5000 8296771 7440797 6409287 4528136 2405499 859337 11781 0 424s 5500 8244099 7398741 6367231 4507086 2400051 853889 6333 0 424s 6000 8187360 7347687 6316177 4456032 2377109 842317 6333 0 424s 6500 8118352 7291309 6272099 4418146 2357938 829533 0 0 424s 7000 8077764 7257349 6244869 4404380 2351024 829533 0 0 424s 7500 8034618 7214203 6209041 4383008 2336942 815451 0 0 424s 8000 7988407 7175507 6170345 4351953 2313576 807622 0 0 424s 8500 7938916 7142561 6137399 4327467 2297332 807622 0 0 424s 9000 7912979 7116624 6119996 4310064 2288474 798764 0 0 424s 9500 7857026 7060671 6091684 4300567 2278977 798764 0 0 424s 10000 7817574 7021219 6072011 4290587 2268997 798764 0 0 424s 11000 7722033 6946925 6008613 4237810 2237463 798764 0 0 424s 12000 7618324 6854352 5928031 4191306 2202157 775443 0 0 424s 13000 7417005 6678203 5790564 4116603 2177804 763380 0 0 424s 14000 7335708 6610502 5736644 4062683 2150377 735953 0 0 424s 15000 7277461 6552255 5678397 4004436 2106447 721422 0 0 424s 16000 7216282 6506170 5632312 3973573 2106447 721422 0 0 424s 17000 7099358 6389246 5532373 3890471 2056275 704705 0 0 424s 18000 7028757 6318645 5461772 3819870 1985674 687130 0 0 424s 19000 6954493 6262568 5405695 3782448 1967023 668479 0 0 424s 20000 6875713 6183788 5346904 3743003 1967023 668479 0 0 424s 21000 6752924 6081496 5264907 3681828 1905848 627955 0 0 424s 22000 6645406 6017177 5200588 3639354 1863374 606840 0 0 424s 23000 6555755 5927526 5110937 3571882 1818321 584599 0 0 424s 24000 6509051 5880822 5064233 3525178 1818321 584599 0 0 424s 25000 6410673 5782444 4989966 3475825 1793534 584599 0 0 424s 26000 6360240 5732011 4964634 3475825 1793534 584599 0 0 424s 27000 6254597 5626368 4885462 3423050 1740759 558501 0 0 424s 28000 6171485 5543256 4802350 3395216 1712925 530667 0 0 424s 29000 6029142 5400913 4688628 3281494 1684138 501880 0 0 424s 30000 5882027 5253798 4541513 3163672 1654590 501880 0 0 424s 31000 5821490 5193261 4480976 3103135 1624358 471648 0 0 424s 32000 5758286 5130057 4417772 3039931 1592823 471648 0 0 424s 33000 5726083 5097854 4385569 3007728 1592823 471648 0 0 424s 34000 5726083 5097854 4385569 3007728 1592823 471648 0 0 424s 35000 5657458 5063791 4351506 2973665 1592823 471648 0 0 424s 36000 5550544 4956877 4315610 2937769 1592823 471648 0 0 424s 37000 5440987 4847320 4278774 2900933 1555987 471648 0 0 424s 38000 5440987 4847320 4278774 2900933 1555987 471648 0 0 424s 39000 5402415 4847320 4278774 2900933 1555987 471648 0 0 424s 40000 5402415 4847320 4278774 2900933 1555987 471648 0 0 424s 45000 5193644 4721367 4194028 2860812 1555987 471648 0 0 424s 50000 4960568 4534952 4007613 2674397 1508336 423997 0 0 424s 55000 4750881 4325265 3797926 2464710 1352765 320689 0 0 424s 60000 4344431 3918815 3450507 2293175 1181230 263588 0 0 424s 65000 4101203 3736226 3267918 2171697 1120835 203193 0 0 424s 70000 3833468 3535098 3135269 2039048 1120835 203193 0 0 424s 75000 3470049 3246162 2846333 1893802 975589 203193 0 0 424s 80000 3311125 3087238 2766576 1814045 975589 203193 0 0 424s 85000 3228980 3005093 2684431 1814045 975589 203193 0 0 424s 90000 2967292 2829470 2508808 1726901 888445 203193 0 0 424s 95000 2967292 2829470 2508808 1726901 888445 203193 0 0 424s 100000 2674343 2536521 2215859 1530166 691710 105463 0 0 424s 120000 2232740 2094918 1774256 1189896 468021 0 0 0 424s 140000 1699582 1699582 1378920 930176 341725 0 0 0 424s 160000 1699582 1699582 1378920 930176 341725 0 0 0 424s 180000 1699582 1699582 1378920 930176 341725 0 0 0 424s 200000 1504562 1504562 1183900 735156 341725 0 0 0 424s 220000 1504562 1504562 1183900 735156 341725 0 0 0 424s 240000 1055818 1055818 735156 735156 341725 0 0 0 424s 260000 1055818 1055818 735156 735156 341725 0 0 0 424s 280000 1055818 1055818 735156 735156 341725 0 0 0 424s 300000 1055818 1055818 735156 735156 341725 0 0 0 424s 320000 1055818 1055818 735156 735156 341725 0 0 0 424s 340000 735156 735156 735156 735156 341725 0 0 0 424s 360000 393431 393431 393431 393431 0 0 0 0 424s 380000 393431 393431 393431 393431 0 0 0 0 424s 400000 0 0 0 0 0 0 0 0 424s 424s Number of reads >= bin by mean Phred+Len 424s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 424s 0 371 321 277 207 114 49 2 0 424s 250 369 320 276 206 113 48 2 0 424s 500 363 315 273 203 112 47 2 0 424s 750 355 311 270 201 111 46 2 0 424s 1000 349 307 266 197 108 44 2 0 424s 1500 341 302 263 194 106 44 2 0 424s 2000 322 284 245 179 98 42 2 0 424s 2500 308 271 233 172 94 40 2 0 424s 3000 296 264 227 167 93 40 2 0 424s 3500 282 251 215 156 84 36 2 0 424s 4000 268 237 201 144 79 36 2 0 424s 4500 256 226 192 140 77 34 2 0 424s 5000 246 216 184 134 73 33 2 0 424s 5500 236 208 176 130 72 32 1 0 424s 6000 226 199 167 121 68 30 1 0 424s 6500 215 190 160 115 65 28 0 0 424s 7000 209 185 156 113 64 28 0 0 424s 7500 203 179 151 110 62 26 0 0 424s 8000 197 174 146 106 59 25 0 0 424s 8500 191 170 142 103 57 25 0 0 424s 9000 188 167 140 101 56 24 0 0 424s 9500 182 161 137 100 55 24 0 0 424s 10000 178 157 135 99 54 24 0 0 424s 11000 169 150 129 94 51 24 0 0 424s 12000 160 142 122 90 48 22 0 0 424s 13000 144 128 111 84 46 21 0 0 424s 14000 138 123 107 80 44 19 0 0 424s 15000 134 119 103 76 41 18 0 0 424s 16000 130 116 100 74 41 18 0 0 424s 17000 123 109 94 69 38 17 0 0 424s 18000 119 105 90 65 34 16 0 0 424s 19000 115 102 87 63 33 15 0 0 424s 20000 111 98 84 61 33 15 0 0 424s 21000 105 93 80 58 30 13 0 0 424s 22000 100 90 77 56 28 12 0 0 424s 23000 96 86 73 53 26 11 0 0 424s 24000 94 84 71 51 26 11 0 0 424s 25000 90 80 68 49 25 11 0 0 424s 26000 88 78 67 49 25 11 0 0 424s 27000 84 74 64 47 23 10 0 0 424s 28000 81 71 61 46 22 9 0 0 424s 29000 76 66 57 42 21 8 0 0 424s 30000 71 61 52 38 20 8 0 0 424s 31000 69 59 50 36 19 7 0 0 424s 32000 67 57 48 34 18 7 0 0 424s 33000 66 56 47 33 18 7 0 0 424s 34000 66 56 47 33 18 7 0 0 424s 35000 64 55 46 32 18 7 0 0 424s 36000 61 52 45 31 18 7 0 0 424s 37000 58 49 44 30 17 7 0 0 424s 38000 58 49 44 30 17 7 0 0 424s 39000 57 49 44 30 17 7 0 0 424s 40000 57 49 44 30 17 7 0 0 424s 45000 52 46 42 29 17 7 0 0 424s 50000 47 42 38 25 16 6 0 0 424s 55000 43 38 34 21 13 4 0 0 424s 60000 36 31 28 18 10 3 0 0 424s 65000 32 28 25 16 9 2 0 0 424s 70000 28 25 23 14 9 2 0 0 424s 75000 23 21 19 12 7 2 0 0 424s 80000 21 19 18 11 7 2 0 0 424s 85000 20 18 17 11 7 2 0 0 424s 90000 17 16 15 10 6 2 0 0 424s 95000 17 16 15 10 6 2 0 0 424s 100000 14 13 12 8 4 1 0 0 424s 120000 10 9 8 5 2 0 0 0 424s 140000 6 6 5 3 1 0 0 0 424s 160000 6 6 5 3 1 0 0 0 424s 180000 6 6 5 3 1 0 0 0 424s 200000 5 5 4 2 1 0 0 0 424s 220000 5 5 4 2 1 0 0 0 424s 240000 3 3 2 2 1 0 0 0 424s 260000 3 3 2 2 1 0 0 0 424s 280000 3 3 2 2 1 0 0 0 424s 300000 3 3 2 2 1 0 0 0 424s 320000 3 3 2 2 1 0 0 0 424s 340000 2 2 2 2 1 0 0 0 424s 360000 1 1 1 1 0 0 0 0 424s 380000 1 1 1 1 0 0 0 0 424s 400000 0 0 0 0 0 0 0 0 425s plotting in the following window: 425s 0 <= Q-score (x-axis) <= 14.0 425s 0 <= length (y-axis) <= 223383 426s 426s 426s pauvre stats -h 426s usage: pauvre stats [-h] [-q] [-f FASTQ] [-H] [--filt_maxlen FILT_MAXLEN] 426s [--filt_maxqual FILT_MAXQUAL] [--filt_minlen FILT_MINLEN] 426s [--filt_minqual FILT_MINQUAL] 426s 426s options: 426s -h, --help show this help message and exit 426s -q, --quiet Do not output warnings to stderr 426s -f FASTQ, --fastq FASTQ 426s The input FASTQ file. 426s -H, --histogram Make a histogram of the read lengths and saves it to a 426s new file 426s --filt_maxlen FILT_MAXLEN 426s This sets the max read length filter reads. 426s --filt_maxqual FILT_MAXQUAL 426s This sets the max mean read quality to filter reads. 426s --filt_minlen FILT_MINLEN 426s This sets the min read length to filter reads. 426s --filt_minqual FILT_MINQUAL 426s This sets the min mean read quality to filter reads. 426s pauvre stats -f nanotest/reads.fastq.gz 428s # Fastq stats for reads.fastq.gz, reads >= 0bp 428s numReads: 371 428s %totalNumReads: 100.00 428s numBasepairs: 8611871 428s %totalBasepairs: 100.00 428s meanLen: 23212.590296495957 428s medianLen: 9390.0 428s minLen: 212 428s maxLen: 393431 428s N50: 60395 428s L50: 36 428s 428s # Fastq stats for reads.fastq.gz, reads >= 1000bp 428s numReads: 349 428s %totalNumReads: 94.07 428s numBasepairs: 8599196 428s %totalBasepairs: 99.85 428s meanLen: 24639.530085959886 428s medianLen: 10585.0 428s minLen: 1009 428s maxLen: 393431 428s N50: 60395 428s L50: 36 428s 428s # Fastq stats for reads.fastq.gz, reads >= 5000bp 428s numReads: 246 428s %totalNumReads: 66.31 428s numBasepairs: 8296771 428s %totalBasepairs: 96.34 428s meanLen: 33726.71138211382 428s medianLen: 17146.0 428s minLen: 5082 428s maxLen: 393431 428s N50: 61111 428s L50: 33 428s 428s # Fastq stats for reads.fastq.gz, reads >= 10000bp 428s numReads: 178 428s %totalNumReads: 47.98 428s numBasepairs: 7817574 428s %totalBasepairs: 90.78 428s meanLen: 43918.95505617977 428s medianLen: 25216.5 428s minLen: 10192 428s maxLen: 393431 428s N50: 67193 428s L50: 30 428s 428s 428s Basepairs >= bin by mean PHRED and length 428s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 428s 0 8611871 7722755 6661156 4720156 2513562 895545 11781 0 428s 250 8611434 7722543 6660944 4719944 2513350 895333 11781 0 428s 500 8608955 7720456 6659643 4718643 2512881 894864 11781 0 428s 750 8604011 7718007 6657705 4717235 2512207 894190 11781 0 428s 1000 8599196 7714763 6654461 4713991 2509728 892515 11781 0 428s 1500 8589389 7708620 6650781 4710311 2507384 892515 11781 0 428s 2000 8554914 7676064 6618225 4682910 2492830 889226 11781 0 428s 2500 8523841 7647182 6591756 4667150 2483798 884829 11781 0 428s 3000 8491143 7627966 6575417 4653398 2480966 884829 11781 0 428s 3500 8446296 7586240 6536848 4617937 2451870 872464 11781 0 428s 4000 8394095 7534039 6484647 4572910 2432856 872464 11781 0 428s 4500 8344217 7488243 6447269 4556363 2424476 864084 11781 0 428s 5000 8296771 7440797 6409287 4528136 2405499 859337 11781 0 428s 5500 8244099 7398741 6367231 4507086 2400051 853889 6333 0 428s 6000 8187360 7347687 6316177 4456032 2377109 842317 6333 0 428s 6500 8118352 7291309 6272099 4418146 2357938 829533 0 0 428s 7000 8077764 7257349 6244869 4404380 2351024 829533 0 0 428s 7500 8034618 7214203 6209041 4383008 2336942 815451 0 0 428s 8000 7988407 7175507 6170345 4351953 2313576 807622 0 0 428s 8500 7938916 7142561 6137399 4327467 2297332 807622 0 0 428s 9000 7912979 7116624 6119996 4310064 2288474 798764 0 0 428s 9500 7857026 7060671 6091684 4300567 2278977 798764 0 0 428s 10000 7817574 7021219 6072011 4290587 2268997 798764 0 0 428s 11000 7722033 6946925 6008613 4237810 2237463 798764 0 0 428s 12000 7618324 6854352 5928031 4191306 2202157 775443 0 0 428s 13000 7417005 6678203 5790564 4116603 2177804 763380 0 0 428s 14000 7335708 6610502 5736644 4062683 2150377 735953 0 0 428s 15000 7277461 6552255 5678397 4004436 2106447 721422 0 0 428s 16000 7216282 6506170 5632312 3973573 2106447 721422 0 0 428s 17000 7099358 6389246 5532373 3890471 2056275 704705 0 0 428s 18000 7028757 6318645 5461772 3819870 1985674 687130 0 0 428s 19000 6954493 6262568 5405695 3782448 1967023 668479 0 0 428s 20000 6875713 6183788 5346904 3743003 1967023 668479 0 0 428s 21000 6752924 6081496 5264907 3681828 1905848 627955 0 0 428s 22000 6645406 6017177 5200588 3639354 1863374 606840 0 0 428s 23000 6555755 5927526 5110937 3571882 1818321 584599 0 0 428s 24000 6509051 5880822 5064233 3525178 1818321 584599 0 0 428s 25000 6410673 5782444 4989966 3475825 1793534 584599 0 0 428s 26000 6360240 5732011 4964634 3475825 1793534 584599 0 0 428s 27000 6254597 5626368 4885462 3423050 1740759 558501 0 0 428s 28000 6171485 5543256 4802350 3395216 1712925 530667 0 0 428s 29000 6029142 5400913 4688628 3281494 1684138 501880 0 0 428s 30000 5882027 5253798 4541513 3163672 1654590 501880 0 0 428s 31000 5821490 5193261 4480976 3103135 1624358 471648 0 0 428s 32000 5758286 5130057 4417772 3039931 1592823 471648 0 0 428s 33000 5726083 5097854 4385569 3007728 1592823 471648 0 0 428s 34000 5726083 5097854 4385569 3007728 1592823 471648 0 0 428s 35000 5657458 5063791 4351506 2973665 1592823 471648 0 0 428s 36000 5550544 4956877 4315610 2937769 1592823 471648 0 0 428s 37000 5440987 4847320 4278774 2900933 1555987 471648 0 0 428s 38000 5440987 4847320 4278774 2900933 1555987 471648 0 0 428s 39000 5402415 4847320 4278774 2900933 1555987 471648 0 0 428s 40000 5402415 4847320 4278774 2900933 1555987 471648 0 0 428s 45000 5193644 4721367 4194028 2860812 1555987 471648 0 0 428s 50000 4960568 4534952 4007613 2674397 1508336 423997 0 0 428s 55000 4750881 4325265 3797926 2464710 1352765 320689 0 0 428s 60000 4344431 3918815 3450507 2293175 1181230 263588 0 0 428s 65000 4101203 3736226 3267918 2171697 1120835 203193 0 0 428s 70000 3833468 3535098 3135269 2039048 1120835 203193 0 0 428s 75000 3470049 3246162 2846333 1893802 975589 203193 0 0 428s 80000 3311125 3087238 2766576 1814045 975589 203193 0 0 428s 85000 3228980 3005093 2684431 1814045 975589 203193 0 0 428s 90000 2967292 2829470 2508808 1726901 888445 203193 0 0 428s 95000 2967292 2829470 2508808 1726901 888445 203193 0 0 428s 100000 2674343 2536521 2215859 1530166 691710 105463 0 0 428s 120000 2232740 2094918 1774256 1189896 468021 0 0 0 428s 140000 1699582 1699582 1378920 930176 341725 0 0 0 428s 160000 1699582 1699582 1378920 930176 341725 0 0 0 428s 180000 1699582 1699582 1378920 930176 341725 0 0 0 428s 200000 1504562 1504562 1183900 735156 341725 0 0 0 428s 220000 1504562 1504562 1183900 735156 341725 0 0 0 428s 240000 1055818 1055818 735156 735156 341725 0 0 0 428s 260000 1055818 1055818 735156 735156 341725 0 0 0 428s 280000 1055818 1055818 735156 735156 341725 0 0 0 428s 300000 1055818 1055818 735156 735156 341725 0 0 0 428s 320000 1055818 1055818 735156 735156 341725 0 0 0 428s 340000 735156 735156 735156 735156 341725 0 0 0 428s 360000 393431 393431 393431 393431 0 0 0 0 428s 380000 393431 393431 393431 393431 0 0 0 0 428s 400000 0 0 0 0 0 0 0 0 428s 428s Number of reads >= bin by mean Phred+Len 428s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 428s 0 371 321 277 207 114 49 2 0 428s 250 369 320 276 206 113 48 2 0 428s 500 363 315 273 203 112 47 2 0 428s 750 355 311 270 201 111 46 2 0 428s 1000 349 307 266 197 108 44 2 0 428s 1500 341 302 263 194 106 44 2 0 428s 2000 322 284 245 179 98 42 2 0 428s 2500 308 271 233 172 94 40 2 0 428s 3000 296 264 227 167 93 40 2 0 428s 3500 282 251 215 156 84 36 2 0 428s 4000 268 237 201 144 79 36 2 0 428s 4500 256 226 192 140 77 34 2 0 428s 5000 246 216 184 134 73 33 2 0 428s 5500 236 208 176 130 72 32 1 0 428s 6000 226 199 167 121 68 30 1 0 428s 6500 215 190 160 115 65 28 0 0 428s 7000 209 185 156 113 64 28 0 0 428s 7500 203 179 151 110 62 26 0 0 428s 8000 197 174 146 106 59 25 0 0 428s 8500 191 170 142 103 57 25 0 0 428s 9000 188 167 140 101 56 24 0 0 428s 9500 182 161 137 100 55 24 0 0 428s 10000 178 157 135 99 54 24 0 0 428s 11000 169 150 129 94 51 24 0 0 428s 12000 160 142 122 90 48 22 0 0 428s 13000 144 128 111 84 46 21 0 0 428s 14000 138 123 107 80 44 19 0 0 428s 15000 134 119 103 76 41 18 0 0 428s 16000 130 116 100 74 41 18 0 0 428s 17000 123 109 94 69 38 17 0 0 428s 18000 119 105 90 65 34 16 0 0 428s 19000 115 102 87 63 33 15 0 0 428s 20000 111 98 84 61 33 15 0 0 428s 21000 105 93 80 58 30 13 0 0 428s 22000 100 90 77 56 28 12 0 0 428s 23000 96 86 73 53 26 11 0 0 428s 24000 94 84 71 51 26 11 0 0 428s 25000 90 80 68 49 25 11 0 0 428s 26000 88 78 67 49 25 11 0 0 428s 27000 84 74 64 47 23 10 0 0 428s 28000 81 71 61 46 22 9 0 0 428s 29000 76 66 57 42 21 8 0 0 428s 30000 71 61 52 38 20 8 0 0 428s 31000 69 59 50 36 19 7 0 0 428s 32000 67 57 48 34 18 7 0 0 428s 33000 66 56 47 33 18 7 0 0 428s 34000 66 56 47 33 18 7 0 0 428s 35000 64 55 46 32 18 7 0 0 428s 36000 61 52 45 31 18 7 0 0 428s 37000 58 49 44 30 17 7 0 0 428s 38000 58 49 44 30 17 7 0 0 428s 39000 57 49 44 30 17 7 0 0 428s 40000 57 49 44 30 17 7 0 0 428s 45000 52 46 42 29 17 7 0 0 428s 50000 47 42 38 25 16 6 0 0 428s 55000 43 38 34 21 13 4 0 0 428s 60000 36 31 28 18 10 3 0 0 428s 65000 32 28 25 16 9 2 0 0 428s 70000 28 25 23 14 9 2 0 0 428s 75000 23 21 19 12 7 2 0 0 428s 80000 21 19 18 11 7 2 0 0 428s 85000 20 18 17 11 7 2 0 0 428s 90000 17 16 15 10 6 2 0 0 428s 95000 17 16 15 10 6 2 0 0 428s 100000 14 13 12 8 4 1 0 0 428s 120000 10 9 8 5 2 0 0 0 428s 140000 6 6 5 3 1 0 0 0 428s 160000 6 6 5 3 1 0 0 0 428s 180000 6 6 5 3 1 0 0 0 428s 200000 5 5 4 2 1 0 0 0 428s 220000 5 5 4 2 1 0 0 0 428s 240000 3 3 2 2 1 0 0 0 428s 260000 3 3 2 2 1 0 0 0 428s 280000 3 3 2 2 1 0 0 0 428s 300000 3 3 2 2 1 0 0 0 428s 320000 3 3 2 2 1 0 0 0 428s 340000 2 2 2 2 1 0 0 0 428s 360000 1 1 1 1 0 0 0 0 428s 380000 1 1 1 1 0 0 0 0 428s 400000 0 0 0 0 0 0 0 0 428s 428s pauvre stats -f nanotest/reads.fastq.gz -H --filt_maxqual 12 431s # Fastq stats for reads.fastq.gz, reads >= 0bp 431s numReads: 371 431s %totalNumReads: 100.00 431s numBasepairs: 8611871 431s %totalBasepairs: 100.00 431s meanLen: 23212.590296495957 431s medianLen: 9390.0 431s minLen: 212 431s maxLen: 393431 431s N50: 60395 431s L50: 36 431s 431s # Fastq stats for reads.fastq.gz, reads >= 1000bp 431s numReads: 349 431s %totalNumReads: 94.07 431s numBasepairs: 8599196 431s %totalBasepairs: 99.85 431s meanLen: 24639.530085959886 431s medianLen: 10585.0 431s minLen: 1009 431s maxLen: 393431 431s N50: 60395 431s L50: 36 431s 431s # Fastq stats for reads.fastq.gz, reads >= 5000bp 431s numReads: 246 431s %totalNumReads: 66.31 431s numBasepairs: 8296771 431s %totalBasepairs: 96.34 431s meanLen: 33726.71138211382 431s medianLen: 17146.0 431s minLen: 5082 431s maxLen: 393431 431s N50: 61111 431s L50: 33 431s 431s # Fastq stats for reads.fastq.gz, reads >= 10000bp 431s numReads: 178 431s %totalNumReads: 47.98 431s numBasepairs: 7817574 431s %totalBasepairs: 90.78 431s meanLen: 43918.95505617977 431s medianLen: 25216.5 431s minLen: 10192 431s maxLen: 393431 431s N50: 67193 431s L50: 30 431s 431s 431s Basepairs >= bin by mean PHRED and length 431s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 431s 0 8611871 7722755 6661156 4720156 2513562 895545 11781 0 431s 250 8611434 7722543 6660944 4719944 2513350 895333 11781 0 431s 500 8608955 7720456 6659643 4718643 2512881 894864 11781 0 431s 750 8604011 7718007 6657705 4717235 2512207 894190 11781 0 431s 1000 8599196 7714763 6654461 4713991 2509728 892515 11781 0 431s 1500 8589389 7708620 6650781 4710311 2507384 892515 11781 0 431s 2000 8554914 7676064 6618225 4682910 2492830 889226 11781 0 431s 2500 8523841 7647182 6591756 4667150 2483798 884829 11781 0 431s 3000 8491143 7627966 6575417 4653398 2480966 884829 11781 0 431s 3500 8446296 7586240 6536848 4617937 2451870 872464 11781 0 431s 4000 8394095 7534039 6484647 4572910 2432856 872464 11781 0 431s 4500 8344217 7488243 6447269 4556363 2424476 864084 11781 0 431s 5000 8296771 7440797 6409287 4528136 2405499 859337 11781 0 431s 5500 8244099 7398741 6367231 4507086 2400051 853889 6333 0 431s 6000 8187360 7347687 6316177 4456032 2377109 842317 6333 0 431s 6500 8118352 7291309 6272099 4418146 2357938 829533 0 0 431s 7000 8077764 7257349 6244869 4404380 2351024 829533 0 0 431s 7500 8034618 7214203 6209041 4383008 2336942 815451 0 0 431s 8000 7988407 7175507 6170345 4351953 2313576 807622 0 0 431s 8500 7938916 7142561 6137399 4327467 2297332 807622 0 0 431s 9000 7912979 7116624 6119996 4310064 2288474 798764 0 0 431s 9500 7857026 7060671 6091684 4300567 2278977 798764 0 0 431s 10000 7817574 7021219 6072011 4290587 2268997 798764 0 0 431s 11000 7722033 6946925 6008613 4237810 2237463 798764 0 0 431s 12000 7618324 6854352 5928031 4191306 2202157 775443 0 0 431s 13000 7417005 6678203 5790564 4116603 2177804 763380 0 0 431s 14000 7335708 6610502 5736644 4062683 2150377 735953 0 0 431s 15000 7277461 6552255 5678397 4004436 2106447 721422 0 0 431s 16000 7216282 6506170 5632312 3973573 2106447 721422 0 0 431s 17000 7099358 6389246 5532373 3890471 2056275 704705 0 0 431s 18000 7028757 6318645 5461772 3819870 1985674 687130 0 0 431s 19000 6954493 6262568 5405695 3782448 1967023 668479 0 0 431s 20000 6875713 6183788 5346904 3743003 1967023 668479 0 0 431s 21000 6752924 6081496 5264907 3681828 1905848 627955 0 0 431s 22000 6645406 6017177 5200588 3639354 1863374 606840 0 0 431s 23000 6555755 5927526 5110937 3571882 1818321 584599 0 0 431s 24000 6509051 5880822 5064233 3525178 1818321 584599 0 0 431s 25000 6410673 5782444 4989966 3475825 1793534 584599 0 0 431s 26000 6360240 5732011 4964634 3475825 1793534 584599 0 0 431s 27000 6254597 5626368 4885462 3423050 1740759 558501 0 0 431s 28000 6171485 5543256 4802350 3395216 1712925 530667 0 0 431s 29000 6029142 5400913 4688628 3281494 1684138 501880 0 0 431s 30000 5882027 5253798 4541513 3163672 1654590 501880 0 0 431s 31000 5821490 5193261 4480976 3103135 1624358 471648 0 0 431s 32000 5758286 5130057 4417772 3039931 1592823 471648 0 0 431s 33000 5726083 5097854 4385569 3007728 1592823 471648 0 0 431s 34000 5726083 5097854 4385569 3007728 1592823 471648 0 0 431s 35000 5657458 5063791 4351506 2973665 1592823 471648 0 0 431s 36000 5550544 4956877 4315610 2937769 1592823 471648 0 0 431s 37000 5440987 4847320 4278774 2900933 1555987 471648 0 0 431s 38000 5440987 4847320 4278774 2900933 1555987 471648 0 0 431s 39000 5402415 4847320 4278774 2900933 1555987 471648 0 0 431s 40000 5402415 4847320 4278774 2900933 1555987 471648 0 0 431s 45000 5193644 4721367 4194028 2860812 1555987 471648 0 0 431s 50000 4960568 4534952 4007613 2674397 1508336 423997 0 0 431s 55000 4750881 4325265 3797926 2464710 1352765 320689 0 0 431s 60000 4344431 3918815 3450507 2293175 1181230 263588 0 0 431s 65000 4101203 3736226 3267918 2171697 1120835 203193 0 0 431s 70000 3833468 3535098 3135269 2039048 1120835 203193 0 0 431s 75000 3470049 3246162 2846333 1893802 975589 203193 0 0 431s 80000 3311125 3087238 2766576 1814045 975589 203193 0 0 431s 85000 3228980 3005093 2684431 1814045 975589 203193 0 0 431s 90000 2967292 2829470 2508808 1726901 888445 203193 0 0 431s 95000 2967292 2829470 2508808 1726901 888445 203193 0 0 431s 100000 2674343 2536521 2215859 1530166 691710 105463 0 0 431s 120000 2232740 2094918 1774256 1189896 468021 0 0 0 431s 140000 1699582 1699582 1378920 930176 341725 0 0 0 431s 160000 1699582 1699582 1378920 930176 341725 0 0 0 431s 180000 1699582 1699582 1378920 930176 341725 0 0 0 431s 200000 1504562 1504562 1183900 735156 341725 0 0 0 431s 220000 1504562 1504562 1183900 735156 341725 0 0 0 431s 240000 1055818 1055818 735156 735156 341725 0 0 0 431s 260000 1055818 1055818 735156 735156 341725 0 0 0 431s 280000 1055818 1055818 735156 735156 341725 0 0 0 431s 300000 1055818 1055818 735156 735156 341725 0 0 0 431s 320000 1055818 1055818 735156 735156 341725 0 0 0 431s 340000 735156 735156 735156 735156 341725 0 0 0 431s 360000 393431 393431 393431 393431 0 0 0 0 431s 380000 393431 393431 393431 393431 0 0 0 0 431s 400000 0 0 0 0 0 0 0 0 431s 431s Number of reads >= bin by mean Phred+Len 431s minLen Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 431s 0 371 321 277 207 114 49 2 0 431s 250 369 320 276 206 113 48 2 0 431s 500 363 315 273 203 112 47 2 0 431s 750 355 311 270 201 111 46 2 0 431s 1000 349 307 266 197 108 44 2 0 431s 1500 341 302 263 194 106 44 2 0 431s 2000 322 284 245 179 98 42 2 0 431s 2500 308 271 233 172 94 40 2 0 431s 3000 296 264 227 167 93 40 2 0 431s 3500 282 251 215 156 84 36 2 0 431s 4000 268 237 201 144 79 36 2 0 431s 4500 256 226 192 140 77 34 2 0 431s 5000 246 216 184 134 73 33 2 0 431s 5500 236 208 176 130 72 32 1 0 431s 6000 226 199 167 121 68 30 1 0 431s 6500 215 190 160 115 65 28 0 0 431s 7000 209 185 156 113 64 28 0 0 431s 7500 203 179 151 110 62 26 0 0 431s 8000 197 174 146 106 59 25 0 0 431s 8500 191 170 142 103 57 25 0 0 431s 9000 188 167 140 101 56 24 0 0 431s 9500 182 161 137 100 55 24 0 0 431s 10000 178 157 135 99 54 24 0 0 431s 11000 169 150 129 94 51 24 0 0 431s 12000 160 142 122 90 48 22 0 0 431s 13000 144 128 111 84 46 21 0 0 431s 14000 138 123 107 80 44 19 0 0 431s 15000 134 119 103 76 41 18 0 0 431s 16000 130 116 100 74 41 18 0 0 431s 17000 123 109 94 69 38 17 0 0 431s 18000 119 105 90 65 34 16 0 0 431s 19000 115 102 87 63 33 15 0 0 431s 20000 111 98 84 61 33 15 0 0 431s 21000 105 93 80 58 30 13 0 0 431s 22000 100 90 77 56 28 12 0 0 431s 23000 96 86 73 53 26 11 0 0 431s 24000 94 84 71 51 26 11 0 0 431s 25000 90 80 68 49 25 11 0 0 431s 26000 88 78 67 49 25 11 0 0 431s 27000 84 74 64 47 23 10 0 0 431s 28000 81 71 61 46 22 9 0 0 431s 29000 76 66 57 42 21 8 0 0 431s 30000 71 61 52 38 20 8 0 0 431s 31000 69 59 50 36 19 7 0 0 431s 32000 67 57 48 34 18 7 0 0 431s 33000 66 56 47 33 18 7 0 0 431s 34000 66 56 47 33 18 7 0 0 431s 35000 64 55 46 32 18 7 0 0 431s 36000 61 52 45 31 18 7 0 0 431s 37000 58 49 44 30 17 7 0 0 431s 38000 58 49 44 30 17 7 0 0 431s 39000 57 49 44 30 17 7 0 0 431s 40000 57 49 44 30 17 7 0 0 431s 45000 52 46 42 29 17 7 0 0 431s 50000 47 42 38 25 16 6 0 0 431s 55000 43 38 34 21 13 4 0 0 431s 60000 36 31 28 18 10 3 0 0 431s 65000 32 28 25 16 9 2 0 0 431s 70000 28 25 23 14 9 2 0 0 431s 75000 23 21 19 12 7 2 0 0 431s 80000 21 19 18 11 7 2 0 0 431s 85000 20 18 17 11 7 2 0 0 431s 90000 17 16 15 10 6 2 0 0 431s 95000 17 16 15 10 6 2 0 0 431s 100000 14 13 12 8 4 1 0 0 431s 120000 10 9 8 5 2 0 0 0 431s 140000 6 6 5 3 1 0 0 0 431s 160000 6 6 5 3 1 0 0 0 431s 180000 6 6 5 3 1 0 0 0 431s 200000 5 5 4 2 1 0 0 0 431s 220000 5 5 4 2 1 0 0 0 431s 240000 3 3 2 2 1 0 0 0 431s 260000 3 3 2 2 1 0 0 0 431s 280000 3 3 2 2 1 0 0 0 431s 300000 3 3 2 2 1 0 0 0 431s 320000 3 3 2 2 1 0 0 0 431s 340000 2 2 2 2 1 0 0 0 431s 360000 1 1 1 1 0 0 0 0 431s 380000 1 1 1 1 0 0 0 0 431s 400000 0 0 0 0 0 0 0 0 431s 431s autopkgtest [17:08:00]: test run-unit-test: -----------------------] 432s autopkgtest [17:08:01]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 432s run-unit-test PASS 432s autopkgtest [17:08:01]: @@@@@@@@@@@@@@@@@@@@ summary 432s run-unit-test PASS 446s Creating nova instance adt-noble-ppc64el-python-pauvre-20240323-170049-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240321.img (UUID 024d6af5-fcba-4a84-85f9-01f41e1878d6)...