0s autopkgtest [19:57:47]: starting date and time: 2024-03-14 19:57:47+0000 0s autopkgtest [19:57:47]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:57:47]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.lzprk3gu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:h5py,src:hdf5,src:openmpi,src:openssl,src:pmix --apt-upgrade poretools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=h5py/3.10.0-1ubuntu2 hdf5/1.10.10+repack-3.1ubuntu2 openmpi/4.1.6-5.1ubuntu3 openssl/3.0.13-0ubuntu1 pmix/5.0.1-4.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-20.secgroup --name adt-noble-ppc64el-poretools-20240314-195747-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 137s autopkgtest [20:00:04]: testbed dpkg architecture: ppc64el 138s autopkgtest [20:00:05]: testbed apt version: 2.7.12 138s autopkgtest [20:00:05]: @@@@@@@@@@@@@@@@@@@@ test bed setup 139s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 139s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [4812 B] 139s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [454 kB] 139s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3020 kB] 140s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [48.4 kB] 140s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [607 kB] 140s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 140s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 140s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 140s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3317 kB] 140s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 140s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [42.8 kB] 140s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 143s Fetched 7625 kB in 2s (3221 kB/s) 143s Reading package lists... 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s Calculating upgrade... 146s The following packages will be REMOVED: 146s libssl3 146s The following NEW packages will be installed: 146s libssl3t64 146s The following packages will be upgraded: 146s openssl 146s 1 upgraded, 1 newly installed, 1 to remove and 0 not upgraded. 146s Need to get 3195 kB of archives. 146s After this operation, 6144 B of additional disk space will be used. 146s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 147s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 147s Fetched 3195 kB in 1s (4259 kB/s) 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 147s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 147s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 147s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 147s wget depends on libssl3 (>= 3.0.0). 147s tnftp depends on libssl3 (>= 3.0.0). 147s tcpdump depends on libssl3 (>= 3.0.0). 147s systemd-resolved depends on libssl3 (>= 3.0.0). 147s systemd depends on libssl3 (>= 3.0.0). 147s sudo depends on libssl3 (>= 3.0.0). 147s rsync depends on libssl3 (>= 3.0.0). 147s python3-cryptography depends on libssl3 (>= 3.0.0). 147s openssh-server depends on libssl3 (>= 3.0.10). 147s openssh-client depends on libssl3 (>= 3.0.10). 147s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 147s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 147s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 147s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 147s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 147s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 147s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 147s libnvme1 depends on libssl3 (>= 3.0.0). 147s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 147s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 147s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 147s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 147s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 147s kmod depends on libssl3 (>= 3.0.0). 147s dhcpcd-base depends on libssl3 (>= 3.0.0). 147s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 147s 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 147s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 147s Selecting previously unselected package libssl3t64:ppc64el. 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 147s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 147s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 148s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 148s Setting up openssl (3.0.13-0ubuntu1) ... 148s Processing triggers for man-db (2.12.0-3) ... 148s Processing triggers for libc-bin (2.39-0ubuntu2) ... 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 149s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 149s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 149s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 149s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 150s Reading package lists... 150s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 154s autopkgtest [20:00:21]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 154s autopkgtest [20:00:21]: @@@@@@@@@@@@@@@@@@@@ apt-source poretools 162s Get:1 http://ftpmaster.internal/ubuntu noble/universe poretools 0.6.0+dfsg-6 (dsc) [1556 B] 162s Get:2 http://ftpmaster.internal/ubuntu noble/universe poretools 0.6.0+dfsg-6 (tar) [68.1 MB] 162s Get:3 http://ftpmaster.internal/ubuntu noble/universe poretools 0.6.0+dfsg-6 (diff) [10.2 kB] 162s gpgv: Signature made Thu Dec 29 08:43:13 2022 UTC 162s gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA 162s gpgv: Can't check signature: No public key 162s dpkg-source: warning: cannot verify inline signature for ./poretools_0.6.0+dfsg-6.dsc: no acceptable signature found 164s autopkgtest [20:00:31]: testing package poretools version 0.6.0+dfsg-6 164s autopkgtest [20:00:31]: build not needed 168s autopkgtest [20:00:35]: test run-unit-test: preparing testbed 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 171s Starting pkgProblemResolver with broken count: 0 171s Starting 2 pkgProblemResolver with broken count: 0 171s Done 172s The following additional packages will be installed: 172s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx libaec0 172s libblas3 libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 172s libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libimagequant0 libjbig0 172s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 172s liblcms2-2 liblerc4 liblzf1 libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 172s libsz2 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 172s libxft2 libxrender1 libxslt1.1 libxss1 poretools poretools-data 172s python-matplotlib-data python3-appdirs python3-brotli python3-contourpy 172s python3-cycler python3-dateutil python3-decorator python3-fonttools 172s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 172s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 172s python3-packaging python3-pandas python3-pandas-lib python3-pil 172s python3-pil.imagetk python3-scipy python3-seaborn python3-sympy python3-tk 172s python3-ufolib2 python3-unicodedata2 tk8.6-blt2.5 unicode-data x11-common 172s Suggested packages: 172s blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python-cycler-doc 172s python-h5py-doc python-lxml-doc cm-super-minimal dvipng ffmpeg 172s fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common 172s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 172s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 172s python3-gmpy2 gcc gfortran python3-dev python3-pytest python-pandas-doc 172s python3-statsmodels python-pil-doc python-scipy-doc texlive-fonts-extra 172s python-sympy-doc tix python3-tk-dbg 172s Recommended packages: 172s javascript-common python3-bs4 python3-cssselect python3-html5lib 172s python3-bottleneck python3-numexpr python3-odf python3-openpyxl 172s python3-tables python3-olefile g++ | c++-compiler python3-patsy 172s isympy-common 172s The following NEW packages will be installed: 172s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 172s fonts-lyx libaec0 libblas3 libdeflate0 libfontconfig1 libgfortran5 libgomp1 172s libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 172s libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 172s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblzf1 libopenjp2-7 libqhull-r8.0 172s libraqm0 libsharpyuv0 libsz2 libtcl8.6 libtiff6 libtk8.6 libwebp7 172s libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 poretools 172s poretools-data python-matplotlib-data python3-appdirs python3-brotli 172s python3-contourpy python3-cycler python3-dateutil python3-decorator 172s python3-fonttools python3-fs python3-h5py python3-h5py-serial 172s python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib 172s python3-mpmath python3-numpy python3-packaging python3-pandas 172s python3-pandas-lib python3-pil python3-pil.imagetk python3-scipy 172s python3-seaborn python3-sympy python3-tk python3-ufolib2 172s python3-unicodedata2 tk8.6-blt2.5 unicode-data x11-common 172s 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. 172s Need to get 128 MB/128 MB of archives. 172s After this operation, 519 MB of additional disk space will be used. 172s Get:1 /tmp/autopkgtest.MPirog/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 172s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 172s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 172s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 172s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 172s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 172s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 172s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 172s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 172s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 172s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 172s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7 [778 kB] 172s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el blt ppc64el 2.5.3+dfsg-7 [4832 B] 172s Get:14 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lyx all 2.4.0~RC3-1 [170 kB] 172s Get:15 http://ftpmaster.internal/ubuntu noble/universe ppc64el libaec0 ppc64el 1.1.2-1 [29.9 kB] 172s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 172s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 172s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 172s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 172s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 172s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 173s Get:22 http://ftpmaster.internal/ubuntu noble/universe ppc64el libsz2 ppc64el 1.1.2-1 [5472 B] 173s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-3.1ubuntu2 [1395 kB] 173s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-3.1ubuntu2 [70.9 kB] 173s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libimagequant0 ppc64el 2.18.0-1 [42.5 kB] 173s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 173s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 173s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 173s Get:29 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 173s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 173s Get:31 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1 [32.8 kB] 173s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el liblcms2-2 ppc64el 2.14-2 [243 kB] 173s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 173s Get:34 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 173s Get:35 http://ftpmaster.internal/ubuntu noble/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6 [220 kB] 173s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el libraqm0 ppc64el 0.10.1-1 [18.9 kB] 173s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 173s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 173s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 173s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 173s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpdemux2 ppc64el 1.3.2-0.4 [14.4 kB] 173s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpmux3 ppc64el 1.3.2-0.4 [31.2 kB] 173s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el libxslt1.1 ppc64el 1.1.35-1 [185 kB] 173s Get:44 http://ftpmaster.internal/ubuntu noble/universe ppc64el python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 173s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-dateutil all 2.8.2-3 [79.2 kB] 173s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libopenjp2-7 ppc64el 2.5.0-2 [233 kB] 173s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-pil ppc64el 10.2.0-1 [526 kB] 173s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-tk ppc64el 3.11.5-1 [116 kB] 173s Get:49 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pil.imagetk ppc64el 10.2.0-1 [10.1 kB] 173s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.24.2-2 [5581 kB] 173s Get:51 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-contourpy ppc64el 1.0.7-1build2 [300 kB] 173s Get:52 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-cycler all 0.11.0-2 [8202 B] 173s Get:53 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-brotli ppc64el 1.1.0-2 [420 kB] 173s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 173s Get:55 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-scipy ppc64el 1.11.4-6 [21.4 MB] 174s Get:56 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 174s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-mpmath all 1.2.1-3 [421 kB] 174s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sympy all 1.12-7 [3966 kB] 174s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 174s Get:60 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fs all 2.4.16-3 [91.1 kB] 174s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-lxml ppc64el 5.1.0-1 [2191 kB] 174s Get:62 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build2 [28.8 kB] 174s Get:63 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-unicodedata2 ppc64el 15.1.0+ds-1 [368 kB] 174s Get:64 http://ftpmaster.internal/ubuntu noble/universe ppc64el unicode-data all 15.1.0-1 [8878 kB] 174s Get:65 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fonttools ppc64el 4.46.0-1 [1746 kB] 174s Get:66 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-kiwisolver ppc64el 1.4.4-1build2 [76.5 kB] 174s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-packaging all 23.2-1 [40.6 kB] 174s Get:68 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-matplotlib ppc64el 3.6.3-1ubuntu3 [7651 kB] 174s Get:69 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas-lib ppc64el 2.1.4+dfsg-4ubuntu2 [8837 kB] 175s Get:70 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 175s Get:71 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-seaborn all 0.13.2-2 [225 kB] 175s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el python3-h5py-serial ppc64el 3.10.0-1ubuntu2 [955 kB] 175s Get:73 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el python3-h5py all 3.10.0-1ubuntu2 [7980 B] 175s Get:74 http://ftpmaster.internal/ubuntu noble/universe ppc64el poretools all 0.6.0+dfsg-6 [19.9 kB] 175s Get:75 http://ftpmaster.internal/ubuntu noble/universe ppc64el poretools-data all 0.6.0+dfsg-6 [44.0 MB] 177s Fetched 128 MB in 5s (28.1 MB/s) 177s Selecting previously unselected package libtcl8.6:ppc64el. 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 177s Preparing to unpack .../00-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 177s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 177s Selecting previously unselected package fonts-dejavu-mono. 177s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 177s Unpacking fonts-dejavu-mono (2.37-8) ... 177s Selecting previously unselected package fonts-dejavu-core. 177s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 177s Unpacking fonts-dejavu-core (2.37-8) ... 177s Selecting previously unselected package fontconfig-config. 177s Preparing to unpack .../03-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 177s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 177s Selecting previously unselected package libfontconfig1:ppc64el. 177s Preparing to unpack .../04-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 177s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 177s Selecting previously unselected package libxrender1:ppc64el. 177s Preparing to unpack .../05-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 177s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 177s Selecting previously unselected package libxft2:ppc64el. 177s Preparing to unpack .../06-libxft2_2.3.6-1_ppc64el.deb ... 177s Unpacking libxft2:ppc64el (2.3.6-1) ... 177s Selecting previously unselected package x11-common. 177s Preparing to unpack .../07-x11-common_1%3a7.7+23ubuntu2_all.deb ... 177s Unpacking x11-common (1:7.7+23ubuntu2) ... 177s Selecting previously unselected package libxss1:ppc64el. 177s Preparing to unpack .../08-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 177s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 177s Selecting previously unselected package libtk8.6:ppc64el. 177s Preparing to unpack .../09-libtk8.6_8.6.13-2_ppc64el.deb ... 177s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 177s Selecting previously unselected package tk8.6-blt2.5. 177s Preparing to unpack .../10-tk8.6-blt2.5_2.5.3+dfsg-7_ppc64el.deb ... 177s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 177s Selecting previously unselected package blt. 177s Preparing to unpack .../11-blt_2.5.3+dfsg-7_ppc64el.deb ... 177s Unpacking blt (2.5.3+dfsg-7) ... 177s Selecting previously unselected package fonts-lyx. 177s Preparing to unpack .../12-fonts-lyx_2.4.0~RC3-1_all.deb ... 177s Unpacking fonts-lyx (2.4.0~RC3-1) ... 177s Selecting previously unselected package libaec0:ppc64el. 177s Preparing to unpack .../13-libaec0_1.1.2-1_ppc64el.deb ... 177s Unpacking libaec0:ppc64el (1.1.2-1) ... 177s Selecting previously unselected package libblas3:ppc64el. 177s Preparing to unpack .../14-libblas3_3.12.0-3_ppc64el.deb ... 177s Unpacking libblas3:ppc64el (3.12.0-3) ... 177s Selecting previously unselected package libdeflate0:ppc64el. 177s Preparing to unpack .../15-libdeflate0_1.19-1_ppc64el.deb ... 177s Unpacking libdeflate0:ppc64el (1.19-1) ... 177s Selecting previously unselected package libgfortran5:ppc64el. 177s Preparing to unpack .../16-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 177s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 177s Selecting previously unselected package libgomp1:ppc64el. 177s Preparing to unpack .../17-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 177s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 177s Selecting previously unselected package libgraphite2-3:ppc64el. 177s Preparing to unpack .../18-libgraphite2-3_1.3.14-2_ppc64el.deb ... 177s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 177s Selecting previously unselected package libharfbuzz0b:ppc64el. 177s Preparing to unpack .../19-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 177s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 177s Selecting previously unselected package libsz2:ppc64el. 177s Preparing to unpack .../20-libsz2_1.1.2-1_ppc64el.deb ... 177s Unpacking libsz2:ppc64el (1.1.2-1) ... 177s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 177s Preparing to unpack .../21-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu2_ppc64el.deb ... 177s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-3.1ubuntu2) ... 177s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 177s Preparing to unpack .../22-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu2_ppc64el.deb ... 177s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-3.1ubuntu2) ... 177s Selecting previously unselected package libimagequant0:ppc64el. 177s Preparing to unpack .../23-libimagequant0_2.18.0-1_ppc64el.deb ... 177s Unpacking libimagequant0:ppc64el (2.18.0-1) ... 177s Selecting previously unselected package libjpeg-turbo8:ppc64el. 177s Preparing to unpack .../24-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 177s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 177s Selecting previously unselected package libjpeg8:ppc64el. 177s Preparing to unpack .../25-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 177s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 177s Selecting previously unselected package libjs-jquery. 177s Preparing to unpack .../26-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 177s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 177s Selecting previously unselected package libjs-jquery-ui. 177s Preparing to unpack .../27-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 177s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 177s Selecting previously unselected package liblapack3:ppc64el. 177s Preparing to unpack .../28-liblapack3_3.12.0-3_ppc64el.deb ... 177s Unpacking liblapack3:ppc64el (3.12.0-3) ... 177s Selecting previously unselected package liblbfgsb0:ppc64el. 177s Preparing to unpack .../29-liblbfgsb0_3.0+dfsg.4-1_ppc64el.deb ... 177s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 177s Selecting previously unselected package liblcms2-2:ppc64el. 177s Preparing to unpack .../30-liblcms2-2_2.14-2_ppc64el.deb ... 177s Unpacking liblcms2-2:ppc64el (2.14-2) ... 177s Selecting previously unselected package liblerc4:ppc64el. 177s Preparing to unpack .../31-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 177s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 178s Selecting previously unselected package liblzf1:ppc64el. 178s Preparing to unpack .../32-liblzf1_3.6-4_ppc64el.deb ... 178s Unpacking liblzf1:ppc64el (3.6-4) ... 178s Selecting previously unselected package libqhull-r8.0:ppc64el. 178s Preparing to unpack .../33-libqhull-r8.0_2020.2-6_ppc64el.deb ... 178s Unpacking libqhull-r8.0:ppc64el (2020.2-6) ... 178s Selecting previously unselected package libraqm0:ppc64el. 178s Preparing to unpack .../34-libraqm0_0.10.1-1_ppc64el.deb ... 178s Unpacking libraqm0:ppc64el (0.10.1-1) ... 178s Selecting previously unselected package libsharpyuv0:ppc64el. 178s Preparing to unpack .../35-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 178s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 178s Selecting previously unselected package libjbig0:ppc64el. 178s Preparing to unpack .../36-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 178s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 178s Selecting previously unselected package libwebp7:ppc64el. 178s Preparing to unpack .../37-libwebp7_1.3.2-0.4_ppc64el.deb ... 178s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 178s Selecting previously unselected package libtiff6:ppc64el. 178s Preparing to unpack .../38-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 178s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 178s Selecting previously unselected package libwebpdemux2:ppc64el. 178s Preparing to unpack .../39-libwebpdemux2_1.3.2-0.4_ppc64el.deb ... 178s Unpacking libwebpdemux2:ppc64el (1.3.2-0.4) ... 178s Selecting previously unselected package libwebpmux3:ppc64el. 178s Preparing to unpack .../40-libwebpmux3_1.3.2-0.4_ppc64el.deb ... 178s Unpacking libwebpmux3:ppc64el (1.3.2-0.4) ... 178s Selecting previously unselected package libxslt1.1:ppc64el. 178s Preparing to unpack .../41-libxslt1.1_1.1.35-1_ppc64el.deb ... 178s Unpacking libxslt1.1:ppc64el (1.1.35-1) ... 178s Selecting previously unselected package python-matplotlib-data. 178s Preparing to unpack .../42-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 178s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 178s Selecting previously unselected package python3-dateutil. 178s Preparing to unpack .../43-python3-dateutil_2.8.2-3_all.deb ... 178s Unpacking python3-dateutil (2.8.2-3) ... 178s Selecting previously unselected package libopenjp2-7:ppc64el. 178s Preparing to unpack .../44-libopenjp2-7_2.5.0-2_ppc64el.deb ... 178s Unpacking libopenjp2-7:ppc64el (2.5.0-2) ... 178s Selecting previously unselected package python3-pil:ppc64el. 178s Preparing to unpack .../45-python3-pil_10.2.0-1_ppc64el.deb ... 178s Unpacking python3-pil:ppc64el (10.2.0-1) ... 178s Selecting previously unselected package python3-tk:ppc64el. 178s Preparing to unpack .../46-python3-tk_3.11.5-1_ppc64el.deb ... 178s Unpacking python3-tk:ppc64el (3.11.5-1) ... 178s Selecting previously unselected package python3-pil.imagetk:ppc64el. 178s Preparing to unpack .../47-python3-pil.imagetk_10.2.0-1_ppc64el.deb ... 178s Unpacking python3-pil.imagetk:ppc64el (10.2.0-1) ... 178s Selecting previously unselected package python3-numpy. 178s Preparing to unpack .../48-python3-numpy_1%3a1.24.2-2_ppc64el.deb ... 178s Unpacking python3-numpy (1:1.24.2-2) ... 178s Selecting previously unselected package python3-contourpy. 178s Preparing to unpack .../49-python3-contourpy_1.0.7-1build2_ppc64el.deb ... 178s Unpacking python3-contourpy (1.0.7-1build2) ... 178s Selecting previously unselected package python3-cycler. 178s Preparing to unpack .../50-python3-cycler_0.11.0-2_all.deb ... 178s Unpacking python3-cycler (0.11.0-2) ... 178s Selecting previously unselected package python3-brotli. 178s Preparing to unpack .../51-python3-brotli_1.1.0-2_ppc64el.deb ... 178s Unpacking python3-brotli (1.1.0-2) ... 178s Selecting previously unselected package python3-decorator. 178s Preparing to unpack .../52-python3-decorator_5.1.1-5_all.deb ... 178s Unpacking python3-decorator (5.1.1-5) ... 178s Selecting previously unselected package python3-scipy. 178s Preparing to unpack .../53-python3-scipy_1.11.4-6_ppc64el.deb ... 178s Unpacking python3-scipy (1.11.4-6) ... 179s Selecting previously unselected package python3-ufolib2. 179s Preparing to unpack .../54-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 179s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 179s Selecting previously unselected package python3-mpmath. 179s Preparing to unpack .../55-python3-mpmath_1.2.1-3_all.deb ... 179s Unpacking python3-mpmath (1.2.1-3) ... 179s Selecting previously unselected package python3-sympy. 179s Preparing to unpack .../56-python3-sympy_1.12-7_all.deb ... 179s Unpacking python3-sympy (1.12-7) ... 180s Selecting previously unselected package python3-appdirs. 180s Preparing to unpack .../57-python3-appdirs_1.4.4-4_all.deb ... 180s Unpacking python3-appdirs (1.4.4-4) ... 180s Selecting previously unselected package python3-fs. 180s Preparing to unpack .../58-python3-fs_2.4.16-3_all.deb ... 180s Unpacking python3-fs (2.4.16-3) ... 180s Selecting previously unselected package python3-lxml:ppc64el. 180s Preparing to unpack .../59-python3-lxml_5.1.0-1_ppc64el.deb ... 180s Unpacking python3-lxml:ppc64el (5.1.0-1) ... 180s Selecting previously unselected package python3-lz4. 180s Preparing to unpack .../60-python3-lz4_4.0.2+dfsg-1build2_ppc64el.deb ... 180s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 180s Selecting previously unselected package python3-unicodedata2. 180s Preparing to unpack .../61-python3-unicodedata2_15.1.0+ds-1_ppc64el.deb ... 180s Unpacking python3-unicodedata2 (15.1.0+ds-1) ... 180s Selecting previously unselected package unicode-data. 180s Preparing to unpack .../62-unicode-data_15.1.0-1_all.deb ... 180s Unpacking unicode-data (15.1.0-1) ... 180s Selecting previously unselected package python3-fonttools. 180s Preparing to unpack .../63-python3-fonttools_4.46.0-1_ppc64el.deb ... 180s Unpacking python3-fonttools (4.46.0-1) ... 180s Selecting previously unselected package python3-kiwisolver. 180s Preparing to unpack .../64-python3-kiwisolver_1.4.4-1build2_ppc64el.deb ... 180s Unpacking python3-kiwisolver (1.4.4-1build2) ... 180s Selecting previously unselected package python3-packaging. 180s Preparing to unpack .../65-python3-packaging_23.2-1_all.deb ... 180s Unpacking python3-packaging (23.2-1) ... 180s Selecting previously unselected package python3-matplotlib. 180s Preparing to unpack .../66-python3-matplotlib_3.6.3-1ubuntu3_ppc64el.deb ... 180s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ... 181s Selecting previously unselected package python3-pandas-lib:ppc64el. 181s Preparing to unpack .../67-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_ppc64el.deb ... 181s Unpacking python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ... 181s Selecting previously unselected package python3-pandas. 181s Preparing to unpack .../68-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ... 181s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ... 181s Selecting previously unselected package python3-seaborn. 181s Preparing to unpack .../69-python3-seaborn_0.13.2-2_all.deb ... 181s Unpacking python3-seaborn (0.13.2-2) ... 181s Selecting previously unselected package python3-h5py-serial. 181s Preparing to unpack .../70-python3-h5py-serial_3.10.0-1ubuntu2_ppc64el.deb ... 181s Unpacking python3-h5py-serial (3.10.0-1ubuntu2) ... 181s Selecting previously unselected package python3-h5py. 181s Preparing to unpack .../71-python3-h5py_3.10.0-1ubuntu2_all.deb ... 181s Unpacking python3-h5py (3.10.0-1ubuntu2) ... 181s Selecting previously unselected package poretools. 181s Preparing to unpack .../72-poretools_0.6.0+dfsg-6_all.deb ... 181s Unpacking poretools (0.6.0+dfsg-6) ... 181s Selecting previously unselected package poretools-data. 181s Preparing to unpack .../73-poretools-data_0.6.0+dfsg-6_all.deb ... 181s Unpacking poretools-data (0.6.0+dfsg-6) ... 182s Selecting previously unselected package autopkgtest-satdep. 182s Preparing to unpack .../74-1-autopkgtest-satdep.deb ... 182s Unpacking autopkgtest-satdep (0) ... 182s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 182s Setting up liblcms2-2:ppc64el (2.14-2) ... 182s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 182s Setting up poretools-data (0.6.0+dfsg-6) ... 182s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 182s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 182s Setting up python3-lz4 (4.0.2+dfsg-1build2) ... 182s Setting up python3-unicodedata2 (15.1.0+ds-1) ... 182s Setting up fonts-lyx (2.4.0~RC3-1) ... 182s Setting up x11-common (1:7.7+23ubuntu2) ... 183s Setting up libdeflate0:ppc64el (1.19-1) ... 183s Setting up libqhull-r8.0:ppc64el (2020.2-6) ... 183s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 183s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 183s Setting up libaec0:ppc64el (1.1.2-1) ... 183s Setting up unicode-data (15.1.0-1) ... 183s Setting up python3-decorator (5.1.1-5) ... 183s Setting up libblas3:ppc64el (3.12.0-3) ... 183s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 183s Setting up python3-packaging (23.2-1) ... 183s Setting up python3-brotli (1.1.0-2) ... 183s Setting up liblzf1:ppc64el (3.6-4) ... 183s Setting up python3-cycler (0.11.0-2) ... 183s Setting up libimagequant0:ppc64el (2.18.0-1) ... 183s Setting up fonts-dejavu-mono (2.37-8) ... 183s Setting up python3-kiwisolver (1.4.4-1build2) ... 183s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 183s Setting up fonts-dejavu-core (2.37-8) ... 183s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 183s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 183s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 183s Setting up libxslt1.1:ppc64el (1.1.35-1) ... 183s Setting up libopenjp2-7:ppc64el (2.5.0-2) ... 183s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 183s Setting up python3-dateutil (2.8.2-3) ... 184s Setting up libxss1:ppc64el (1:1.2.3-1build2) ... 184s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 184s Setting up python3-mpmath (1.2.1-3) ... 184s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... 184s Setting up libwebpmux3:ppc64el (1.3.2-0.4) ... 184s Setting up python3-appdirs (1.4.4-4) ... 184s Setting up libsz2:ppc64el (1.1.2-1) ... 184s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 184s Setting up python3-sympy (1.12-7) ... 191s Setting up liblapack3:ppc64el (3.12.0-3) ... 191s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 191s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 191s Setting up libwebpdemux2:ppc64el (1.3.2-0.4) ... 191s Setting up python3-fs (2.4.16-3) ... 191s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 191s Setting up libraqm0:ppc64el (0.10.1-1) ... 191s Setting up python3-numpy (1:1.24.2-2) ... 193s Setting up python3-lxml:ppc64el (5.1.0-1) ... 194s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 194s Setting up python3-contourpy (1.0.7-1build2) ... 194s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 194s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-3.1ubuntu2) ... 194s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 194s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-3.1ubuntu2) ... 194s Setting up libxft2:ppc64el (2.3.6-1) ... 194s Setting up python3-scipy (1.11.4-6) ... 197s Setting up libtk8.6:ppc64el (8.6.13-2) ... 197s Setting up python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ... 197s Setting up python3-h5py-serial (3.10.0-1ubuntu2) ... 197s Setting up python3-pil:ppc64el (10.2.0-1) ... 198s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 203s Setting up python3-h5py (3.10.0-1ubuntu2) ... 203s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... 203s Setting up blt (2.5.3+dfsg-7) ... 203s Setting up python3-tk:ppc64el (3.11.5-1) ... 203s Setting up python3-pil.imagetk:ppc64el (10.2.0-1) ... 203s Setting up python3-fonttools (4.46.0-1) ... 204s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 205s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 206s Setting up python3-seaborn (0.13.2-2) ... 206s Setting up poretools (0.6.0+dfsg-6) ... 207s Setting up autopkgtest-satdep (0) ... 207s Processing triggers for libc-bin (2.39-0ubuntu2) ... 207s Processing triggers for man-db (2.12.0-3) ... 211s (Reading database ... 79147 files and directories currently installed.) 211s Removing autopkgtest-satdep (0) ... 211s autopkgtest [20:01:18]: test run-unit-test: [----------------------- 211s Test 1 211s poretools fastq --min-length 5000 test_data/ 212s PASS 212s 212s Test 2 212s poretools yield_plot \ 212s --plot-type basepairs \ 212s --saveas foo.pdf \ 212s test_data/ 214s poretools yield_plot \ 214s --plot-type basepairs \ 214s --saveas foo.png \ 214s --theme-bw \ 215s PASS 215s 215s Test 3 215s poretools winner test_data/ 215s None 215s poretools winner --type all test_data/ 216s None 216s poretools winner --type 2D test_data/ 216s None 216s poretools winner --type fwd,rev test_data/ 216s None 216s poretools winner --type best test_data/ 216s None 216s PASS 216s 216s Test 4 216s poretools stats test_data/ 217s WARNING:poretools:No valid sequences observed. 217s 217s PASS 217s 217s Test 5 217s poretools hist --num-bins 20 --max-length 10000 test_data/ --saveas pdf 218s PASS 218s 218s Test 6 218s poretools nucdist test_data/ 218s PASS 218s 218s Test 7 218s poretools qualdist test_data/ 219s PASS 219s 219s Test 8 219s poretools qualpos test_data/ 219s INFO:poreminion:Processing data... 219s INFO:poreminion:Constructing box plot... 219s INFO:poreminion:Showing plot... 219s PASS 219s 219s Test 9 219s poretools tabular test_data/2016_3_4_3507_1_ch120_read418_strand.fast5 220s length name sequence quals 220s PASS 220s 220s Test 10 220s poretools events test_data/ | head -5 220s file strand mean start stdv length model_state model_level move p_model_state mp_model_state p_mp_model_state p_A p_C p_G p_T raw_index 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 template 42.93969340528178 6418.830677290836 0.7134102935217544 0.03884462151394422 b'TGTTTC' 42.95708607121396 0 0.13630931 b'TGTTTC' 0.13630931 0.00012806157 0.00067021925 0.3135543 0.68564725 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 template 46.71425518329327 6418.86952191235 0.7261819395557063 0.004316069057104913 b'GTTTCT' 47.723063257955666 1 0.31007 b'GTTTCT' 0.31007 1.3789029e-06 8.071761e-06 0.00022681298 0.99976355 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 template 55.78379262907608 6418.873837981408 0.7557617905367306 0.03818061088977423 b'TTTCTG' 56.21876056606567 1 0.6703579 b'TTTCTG' 0.6703579 1.0874543e-05 0.009742021 2.7833782e-06 0.99024427 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 template 54.64627048658287 6418.912018592297 0.7270648373349708 0.007636122177954847 b'TTCTGT' 53.6759638862406 1 0.95166737 b'TTCTGT' 0.95166737 0.0028344584 0.98442465 0.0005142844 0.012226499 220s Exception ignored in: <_io.TextIOWrapper name='' mode='w' encoding='utf-8'> 220s BrokenPipeError: [Errno 32] Broken pipe 220s PASS 220s 220s Test 11 220s poretools events --pre-basecalled test_data/ | head -5 220s file strand mean start stdv length model_state model_level move p_model_state mp_model_state p_mp_model_state p_A p_C p_G p_T raw_index 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 pre_basecalled 49.1785888671875 19332105 7.994841503330146 11 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 pre_basecalled 53.63539848327636 19332116 1.518727674356797 32 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 pre_basecalled 43.34371569181743 19332148 1.0419207164318205 19 220s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 pre_basecalled 50.18935617754536 19332167 0.8889653601307206 31 220s Exception ignored in: <_io.TextIOWrapper name='' mode='w' encoding='utf-8'> 220s BrokenPipeError: [Errno 32] Broken pipe 220s PASS 220s 220s Test 12 220s poretools times test_data/ 220s channel filename read_length exp_starttime unix_timestamp duration unix_timestamp_end iso_timestamp day hour minute 220s 128 test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 0 1457127309 1457133727 53 1457133780 2016-03-04T23:22:07+0000 04 23 22 220s 126 test_data/2016_3_4_3507_1_ch126_read223_strand.fast5 0 1457127309 1457128649 21 1457128670 2016-03-04T21:57:29+0000 04 21 57 220s 126 test_data/2016_3_4_3507_1_ch126_read326_strand.fast5 0 1457127309 1457129771 6 1457129777 2016-03-04T22:16:11+0000 04 22 16 220s 126 test_data/2016_3_4_3507_1_ch126_read217_strand.fast5 0 1457127309 1457128331 70 1457128401 2016-03-04T21:52:11+0000 04 21 52 220s 13 test_data/2016_3_4_3507_1_ch13_read1130_strand.fast5 0 1457127309 1457137813 46 1457137859 2016-03-05T00:30:13+0000 05 00 30 220s 126 test_data/2016_3_4_3507_1_ch126_read501_strand.fast5 0 1457127309 1457131059 110 1457131169 2016-03-04T22:37:39+0000 04 22 37 220s 128 test_data/2016_3_4_3507_1_ch128_read270_strand.fast5 0 1457127309 1457128363 39 1457128402 2016-03-04T21:52:43+0000 04 21 52 220s 126 test_data/2016_3_4_3507_1_ch126_read562_strand.fast5 0 1457127309 1457132072 95 1457132167 2016-03-04T22:54:32+0000 04 22 54 220s 126 test_data/2016_3_4_3507_1_ch126_read969_strand.fast5 0 1457127309 1457138004 19 1457138023 2016-03-05T00:33:24+0000 05 00 33 220s 120 test_data/2016_3_4_3507_1_ch120_read415_strand.fast5 0 1457127309 1457130808 24 1457130832 2016-03-04T22:33:28+0000 04 22 33 220s 126 test_data/2016_3_4_3507_1_ch126_read42_strand.fast5 0 1457127309 1457127427 64 1457127491 2016-03-04T21:37:07+0000 04 21 37 220s 126 test_data/2016_3_4_3507_1_ch126_read899_strand.fast5 0 1457127309 1457137287 20 1457137307 2016-03-05T00:21:27+0000 05 00 21 220s 128 test_data/2016_3_4_3507_1_ch128_read635_strand.fast5 0 1457127309 1457132225 71 1457132296 2016-03-04T22:57:05+0000 04 22 57 220s 126 test_data/2016_3_4_3507_1_ch126_read160_strand.fast5 0 1457127309 1457127855 11 1457127866 2016-03-04T21:44:15+0000 04 21 44 220s 126 test_data/2016_3_4_3507_1_ch126_read743_strand.fast5 0 1457127309 1457134273 56 1457134329 2016-03-04T23:31:13+0000 04 23 31 220s 120 test_data/2016_3_4_3507_1_ch120_read240_strand.fast5 0 1457127309 1457128868 47 1457128915 2016-03-04T22:01:08+0000 04 22 01 220s 126 test_data/2016_3_4_3507_1_ch126_read249_strand.fast5 0 1457127309 1457128880 38 1457128918 2016-03-04T22:01:20+0000 04 22 01 220s 52 test_data/COLLES_L160693_20160728_FNFAB23794_MN17350_sequencing_run_E_coli_K12_1D_R9_SpotON_41280_ch52_read58_strand.fast5 0 1469741121 1469741953 45 1469741998 2016-07-28T21:39:13+0000 28 21 39 220s 128 test_data/2016_3_4_3507_1_ch128_read647_strand.fast5 0 1457127309 1457132386 20 1457132406 2016-03-04T22:59:46+0000 04 22 59 220s 128 test_data/2016_3_4_3507_1_ch128_read422_strand.fast5 0 1457127309 1457129421 35 1457129456 2016-03-04T22:10:21+0000 04 22 10 220s 13 test_data/2016_3_4_3507_1_ch13_read1132_strand.fast5 0 1457127309 1457137901 79 1457137980 2016-03-05T00:31:41+0000 05 00 31 220s 126 test_data/2016_3_4_3507_1_ch126_read700_strand.fast5 0 1457127309 1457133555 64 1457133619 2016-03-04T23:19:15+0000 04 23 19 220s 126 test_data/2016_3_4_3507_1_ch126_read324_strand.fast5 0 1457127309 1457129690 43 1457129733 2016-03-04T22:14:50+0000 04 22 14 220s 120 test_data/2016_3_4_3507_1_ch120_read418_strand.fast5 0 1457127309 1457130851 31 1457130882 2016-03-04T22:34:11+0000 04 22 34 220s 126 test_data/2016_3_4_3507_1_ch126_read618_strand.fast5 0 1457127309 1457132641 29 1457132670 2016-03-04T23:04:01+0000 04 23 04 220s 128 test_data/2016_3_4_3507_1_ch128_read204_strand.fast5 0 1457127309 1457128023 19 1457128042 2016-03-04T21:47:03+0000 04 21 47 220s 126 test_data/2016_3_4_3507_1_ch126_read940_strand.fast5 0 1457127309 1457137663 23 1457137686 2016-03-05T00:27:43+0000 05 00 27 220s 120 test_data/2016_3_4_3507_1_ch120_read83_strand.fast5 0 1457127309 1457127862 51 1457127913 2016-03-04T21:44:22+0000 04 21 44 220s 120 test_data/2016_3_4_3507_1_ch120_read521_strand.fast5 0 1457127309 1457132324 40 1457132364 2016-03-04T22:58:44+0000 04 22 58 220s 126 test_data/2016_3_4_3507_1_ch126_read831_strand.fast5 0 1457127309 1457136233 64 1457136297 2016-03-05T00:03:53+0000 05 00 03 220s 13 test_data/2016_3_4_3507_1_ch13_read1404_strand.fast5 0 1457127309 1457141911 44 1457141955 2016-03-05T01:38:31+0000 05 01 38 220s 128 test_data/2016_3_4_3507_1_ch128_read521_strand.fast5 0 1457127309 1457130585 43 1457130628 2016-03-04T22:29:45+0000 04 22 29 220s 126 test_data/2016_3_4_3507_1_ch126_read382_strand.fast5 0 1457127309 1457130139 15 1457130154 2016-03-04T22:22:19+0000 04 22 22 220s 120 test_data/2016_3_4_3507_1_ch120_read635_strand.fast5 0 1457127309 1457133473 43 1457133516 2016-03-04T23:17:53+0000 04 23 17 220s 126 test_data/2016_3_4_3507_1_ch126_read1250_strand.fast5 0 1457127309 1457141826 25 1457141851 2016-03-05T01:37:06+0000 05 01 37 220s 120 test_data/2016_3_4_3507_1_ch120_read89_strand.fast5 0 1457127309 1457127952 12 1457127964 2016-03-04T21:45:52+0000 04 21 45 220s 126 test_data/2016_3_4_3507_1_ch126_read1169_strand.fast5 0 1457127309 1457140028 30 1457140058 2016-03-05T01:07:08+0000 05 01 07 220s 128 test_data/2016_3_4_3507_1_ch128_read783_strand.fast5 0 1457127309 1457134205 49 1457134254 2016-03-04T23:30:05+0000 04 23 30 220s 128 test_data/2016_3_4_3507_1_ch128_read763_strand.fast5 0 1457127309 1457133850 25 1457133875 2016-03-04T23:24:10+0000 04 23 24 220s 126 test_data/2016_3_4_3507_1_ch126_read857_strand.fast5 0 1457127309 1457136882 36 1457136918 2016-03-05T00:14:42+0000 05 00 14 220s 13 test_data/2016_3_4_3507_1_ch13_read1414_strand.fast5 0 1457127309 1457142000 23 1457142023 2016-03-05T01:40:00+0000 05 01 40 220s 120 test_data/2016_3_4_3507_1_ch120_read706_strand.fast5 0 1457127309 1457134485 41 1457134526 2016-03-04T23:34:45+0000 04 23 34 220s 120 test_data/2016_3_4_3507_1_ch120_read586_strand.fast5 0 1457127309 1457132971 43 1457133014 2016-03-04T23:09:31+0000 04 23 09 220s 126 test_data/2016_3_4_3507_1_ch126_read1377_strand.fast5 0 1457127309 1457148908 5 1457148913 2016-03-05T03:35:08+0000 05 03 35 220s 128 test_data/2016_3_4_3507_1_ch128_read790_strand.fast5 0 1457127309 1457134331 52 1457134383 2016-03-04T23:32:11+0000 04 23 32 220s 13 test_data/2016_3_4_3507_1_ch13_read1456_strand.fast5 0 1457127309 1457143016 46 1457143062 2016-03-05T01:56:56+0000 05 01 56 220s 120 test_data/2016_3_4_3507_1_ch120_read433_strand.fast5 0 1457127309 1457130943 72 1457131015 2016-03-04T22:35:43+0000 04 22 35 220s 126 test_data/2016_3_4_3507_1_ch126_read914_strand.fast5 0 1457127309 1457137430 17 1457137447 2016-03-05T00:23:50+0000 05 00 23 220s 128 test_data/2016_3_4_3507_1_ch128_read95_strand.fast5 0 1457127309 1457127626 1 1457127627 2016-03-04T21:40:26+0000 04 21 40 220s 120 test_data/2016_3_4_3507_1_ch120_read542_strand.fast5 0 1457127309 1457132498 77 1457132575 2016-03-04T23:01:38+0000 04 23 01 220s 13 test_data/2016_3_4_3507_1_ch13_read1150_strand.fast5 0 1457127309 1457138371 56 1457138427 2016-03-05T00:39:31+0000 05 00 39 220s 126 test_data/2016_3_4_3507_1_ch126_read1387_strand.fast5 0 1457127309 1457148938 19 1457148957 2016-03-05T03:35:38+0000 05 03 35 220s 13 test_data/2016_3_4_3507_1_ch13_read1474_strand.fast5 0 1457127309 1457143353 35 1457143388 2016-03-05T02:02:33+0000 05 02 02 220s 126 test_data/2016_3_4_3507_1_ch126_read843_strand.fast5 0 1457127309 1457136727 48 1457136775 2016-03-05T00:12:07+0000 05 00 12 220s 120 test_data/2016_3_4_3507_1_ch120_read443_strand.fast5 0 1457127309 1457131100 7 1457131107 2016-03-04T22:38:20+0000 04 22 38 220s 128 test_data/2016_3_4_3507_1_ch128_read404_strand.fast5 0 1457127309 1457129255 54 1457129309 2016-03-04T22:07:35+0000 04 22 07 220s 126 test_data/2016_3_4_3507_1_ch126_read601_strand.fast5 0 1457127309 1457132558 20 1457132578 2016-03-04T23:02:38+0000 04 23 02 220s 128 test_data/2016_3_4_3507_1_ch128_read365_strand.fast5 0 1457127309 1457128915 54 1457128969 2016-03-04T22:01:55+0000 04 22 01 220s 128 test_data/2016_3_4_3507_1_ch128_read430_strand.fast5 0 1457127309 1457129549 4 1457129553 2016-03-04T22:12:29+0000 04 22 12 220s 128 test_data/2016_3_4_3507_1_ch128_read503_strand.fast5 0 1457127309 1457130219 92 1457130311 2016-03-04T22:23:39+0000 04 22 23 220s 120 test_data/2016_3_4_3507_1_ch120_read505_strand.fast5 0 1457127309 1457132189 17 1457132206 2016-03-04T22:56:29+0000 04 22 56 220s 120 test_data/2016_3_4_3507_1_ch120_read353_strand.fast5 0 1457127309 1457129863 28 1457129891 2016-03-04T22:17:43+0000 04 22 17 220s 126 test_data/2016_3_4_3507_1_ch126_read1079_strand.fast5 0 1457127309 1457139272 90 1457139362 2016-03-05T00:54:32+0000 05 00 54 220s 126 test_data/2016_3_4_3507_1_ch126_read833_strand.fast5 0 1457127309 1457136341 50 1457136391 2016-03-05T00:05:41+0000 05 00 05 220s 128 test_data/2016_3_4_3507_1_ch128_read376_strand.fast5 0 1457127309 1457129030 83 1457129113 2016-03-04T22:03:50+0000 04 22 03 220s 128 test_data/2016_3_4_3507_1_ch128_read384_strand.fast5 0 1457127309 1457129195 23 1457129218 2016-03-04T22:06:35+0000 04 22 06 220s 126 test_data/2016_3_4_3507_1_ch126_read1066_strand.fast5 0 1457127309 1457139171 38 1457139209 2016-03-05T00:52:51+0000 05 00 52 220s 128 test_data/2016_3_4_3507_1_ch128_read361_strand.fast5 0 1457127309 1457128820 50 1457128870 2016-03-04T22:00:20+0000 04 22 00 220s 128 test_data/2016_3_4_3507_1_ch128_read723_strand.fast5 0 1457127309 1457133407 47 1457133454 2016-03-04T23:16:47+0000 04 23 16 220s PASS 220s 220s Test 13 220s poretools index test_data | head -5 221s source_filename template_fwd_length complement_rev_length 2d_length asic_id asic_temp heatsink_temp channel exp_start_time exp_start_time_string_date exp_start_time_string_time start_time start_time_string_date start_time_string_time duration fast5_version 221s test_data/2016_3_4_3507_1_ch128_read753_strand.fast5 None None None 3571011476 30.37 36.99 128 1457127309 2016-Mar-04 (Fri) 21:35:09 1457133727 2016-Mar-04 (Fri) 23:22:07 53 metrichor1.16 221s test_data/2016_3_4_3507_1_ch126_read223_strand.fast5 None None None 3571011476 30.37 36.99 126 1457127309 2016-Mar-04 (Fri) 21:35:09 1457128649 2016-Mar-04 (Fri) 21:57:29 21 metrichor1.16 221s test_data/2016_3_4_3507_1_ch126_read326_strand.fast5 None None None 3571011476 30.37 36.99 126 1457127309 2016-Mar-04 (Fri) 21:35:09 1457129771 2016-Mar-04 (Fri) 22:16:11 6 metrichor1.16 221s test_data/2016_3_4_3507_1_ch126_read217_strand.fast5 None None None 3571011476 30.37 36.99 126 1457127309 2016-Mar-04 (Fri) 21:35:09 1457128331 2016-Mar-04 (Fri) 21:52:11 70 metrichor1.16 221s PASS 221s 221s autopkgtest [20:01:28]: test run-unit-test: -----------------------] 222s autopkgtest [20:01:29]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 222s run-unit-test PASS 222s autopkgtest [20:01:29]: @@@@@@@@@@@@@@@@@@@@ summary 222s run-unit-test PASS 233s Creating nova instance adt-noble-ppc64el-poretools-20240314-195747-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-ppc64el-server-20240314.img (UUID a031584c-aec8-4412-bff6-4238354f4d17)...