0s autopkgtest [15:24:42]: starting date and time: 2024-03-23 15:24:42+0000
  0s autopkgtest [15:24:42]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
  0s autopkgtest [15:24:42]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9jd47cv4/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-pysam,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade pairtools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python-pysam/0.22.0+ds-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-10.secgroup --name adt-noble-ppc64el-pairtools-20240323-152442-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
113s autopkgtest [15:26:35]: testbed dpkg architecture: ppc64el
113s autopkgtest [15:26:35]: testbed apt version: 2.7.12
113s autopkgtest [15:26:35]: @@@@@@@@@@@@@@@@@@@@ test bed setup
114s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
114s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [493 kB]
114s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB]
114s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3969 kB]
114s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
114s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [659 kB]
114s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B]
114s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B]
114s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B]
114s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4248 kB]
115s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B]
115s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [60.8 kB]
115s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B]
118s Fetched 9623 kB in 2s (4213 kB/s)
118s Reading package lists...
121s Reading package lists...
121s Building dependency tree...
121s Reading state information...
121s Calculating upgrade...
121s The following packages will be REMOVED:
121s   libssl3
121s The following NEW packages will be installed:
121s   libssl3t64
121s The following packages have been kept back:
121s   curl
121s The following packages will be upgraded:
121s   openssl
121s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded.
121s Need to get 3151 kB of archives.
121s After this operation, 73.7 kB of additional disk space will be used.
121s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu2 [1026 kB]
122s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu2 [2125 kB]
122s Fetched 3151 kB in 1s (3727 kB/s)
122s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 70156 files and directories currently installed.)
122s Preparing to unpack .../openssl_3.0.13-0ubuntu2_ppc64el.deb ...
122s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ...
122s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested:
122s  wget depends on libssl3 (>= 3.0.0).
122s  tnftp depends on libssl3 (>= 3.0.0).
122s  tcpdump depends on libssl3 (>= 3.0.0).
122s  systemd-resolved depends on libssl3 (>= 3.0.0).
122s  systemd depends on libssl3 (>= 3.0.0).
122s  sudo depends on libssl3 (>= 3.0.0).
122s  rsync depends on libssl3 (>= 3.0.0).
122s  python3-cryptography depends on libssl3 (>= 3.0.0).
122s  openssh-server depends on libssl3 (>= 3.0.10).
122s  openssh-client depends on libssl3 (>= 3.0.10).
122s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
122s  libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0).
122s  libssh-4:ppc64el depends on libssl3 (>= 3.0.0).
122s  libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0).
122s  libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0).
122s  libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0).
122s  libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0).
122s  libnvme1 depends on libssl3 (>= 3.0.0).
122s  libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0).
122s  libkmod2:ppc64el depends on libssl3 (>= 3.0.0).
122s  libfido2-1:ppc64el depends on libssl3 (>= 3.0.0).
122s  libcurl4:ppc64el depends on libssl3 (>= 3.0.0).
122s  libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0).
122s  kmod depends on libssl3 (>= 3.0.0).
122s  dhcpcd-base depends on libssl3 (>= 3.0.0).
122s  bind9-libs:ppc64el depends on libssl3 (>= 3.0.0).
122s 
122s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 70156 files and directories currently installed.)
122s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ...
122s Selecting previously unselected package libssl3t64:ppc64el.
123s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 70145 files and directories currently installed.)
123s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_ppc64el.deb ...
123s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu2) ...
123s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu2) ...
123s Setting up openssl (3.0.13-0ubuntu2) ...
123s Processing triggers for man-db (2.12.0-3) ...
123s Processing triggers for libc-bin (2.39-0ubuntu6) ...
123s Reading package lists...
123s Building dependency tree...
123s Reading state information...
124s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
124s sh: Attempting to set up Debian/Ubuntu apt sources automatically
124s sh: Distribution appears to be Ubuntu
125s Reading package lists...
125s Building dependency tree...
125s Reading state information...
125s eatmydata is already the newest version (131-1).
125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
125s Reading package lists...
125s Building dependency tree...
125s Reading state information...
126s dbus is already the newest version (1.14.10-4ubuntu1).
126s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
126s Reading package lists...
126s Building dependency tree...
126s Reading state information...
126s rng-tools-debian is already the newest version (2.4).
126s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
126s Reading package lists...
126s Building dependency tree...
126s Reading state information...
126s The following packages will be REMOVED:
126s   cloud-init* python3-configobj* python3-debconf*
127s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
127s After this operation, 3256 kB disk space will be freed.
127s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 70158 files and directories currently installed.)
127s Removing cloud-init (24.1.2-0ubuntu1) ...
127s Removing python3-configobj (5.0.8-3) ...
127s Removing python3-debconf (1.5.86) ...
127s Processing triggers for man-db (2.12.0-3) ...
128s (Reading database ... 
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 69769 files and directories currently installed.)
128s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ...
128s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
128s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
128s invoke-rc.d: policy-rc.d denied execution of try-restart.
128s Reading package lists...
128s Building dependency tree...
128s Reading state information...
128s linux-generic is already the newest version (6.8.0-11.11+1).
128s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
129s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
129s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
129s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
131s Reading package lists...
131s Reading package lists...
132s Building dependency tree...
132s Reading state information...
132s Calculating upgrade...
132s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
132s Reading package lists...
132s Building dependency tree...
132s Reading state information...
132s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
132s autopkgtest [15:26:54]: rebooting testbed after setup commands that affected boot
167s autopkgtest [15:27:29]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024
170s autopkgtest [15:27:32]: @@@@@@@@@@@@@@@@@@@@ apt-source pairtools
173s Get:1 http://ftpmaster.internal/ubuntu noble/universe pairtools 1.0.3-1 (dsc) [2382 B]
173s Get:2 http://ftpmaster.internal/ubuntu noble/universe pairtools 1.0.3-1 (tar) [1255 kB]
173s Get:3 http://ftpmaster.internal/ubuntu noble/universe pairtools 1.0.3-1 (diff) [7084 B]
173s gpgv: Signature made Mon Dec 11 14:44:59 2023 UTC
173s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
173s gpgv:                issuer "tille@debian.org"
173s gpgv: Can't check signature: No public key
173s dpkg-source: warning: cannot verify inline signature for ./pairtools_1.0.3-1.dsc: no acceptable signature found
173s autopkgtest [15:27:35]: testing package pairtools version 1.0.3-1
173s autopkgtest [15:27:35]: build not needed
174s autopkgtest [15:27:36]: test upstream-tests: preparing testbed
175s Reading package lists...
175s Building dependency tree...
175s Reading state information...
176s Starting pkgProblemResolver with broken count: 0
176s Starting 2 pkgProblemResolver with broken count: 0
176s Done
176s The following additional packages will be installed:
176s   blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx libblas3
176s   libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3
176s   libharfbuzz0b libhts3 libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8
176s   libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2
176s   liblerc4 libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6
176s   libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1
176s   libxss1 python-matplotlib-data python3-appdirs python3-bioframe
176s   python3-brotli python3-click python3-colorama python3-contourpy
176s   python3-cycler python3-dateutil python3-decorator python3-fonttools
176s   python3-fs python3-iniconfig python3-kiwisolver python3-lxml python3-lz4
176s   python3-matplotlib python3-mpmath python3-numpy python3-packaging
176s   python3-pairtools python3-pandas python3-pandas-lib python3-pil
176s   python3-pil.imagetk python3-pluggy python3-pysam python3-pytest
176s   python3-scipy python3-sympy python3-tk python3-ufolib2 python3-unicodedata2
176s   tk8.6-blt2.5 unicode-data x11-common
176s Suggested packages:
176s   blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python-cycler-doc
176s   python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript
176s   gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python3-cairocffi
176s   python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado
176s   texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc
176s   gfortran python3-dev python3-pairtools-examples python-pandas-doc
176s   python3-statsmodels python-pil-doc python-scipy-doc texlive-fonts-extra
176s   python-sympy-doc tix python3-tk-dbg
176s Recommended packages:
176s   javascript-common python3-bs4 python3-cssselect python3-html5lib
176s   python3-bottleneck python3-numexpr python3-odf python3-openpyxl
176s   python3-tables python3-olefile g++ | c++-compiler isympy-common
176s The following NEW packages will be installed:
176s   autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono
176s   fonts-lyx libblas3 libdeflate0 libfontconfig1 libgfortran5 libgomp1
176s   libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 libimagequant0 libjbig0
176s   libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0
176s   liblcms2-2 liblerc4 libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0
176s   libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2
176s   libxrender1 libxslt1.1 libxss1 python-matplotlib-data python3-appdirs
176s   python3-bioframe python3-brotli python3-click python3-colorama
176s   python3-contourpy python3-cycler python3-dateutil python3-decorator
176s   python3-fonttools python3-fs python3-iniconfig python3-kiwisolver
176s   python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy
176s   python3-packaging python3-pairtools python3-pandas python3-pandas-lib
176s   python3-pil python3-pil.imagetk python3-pluggy python3-pysam python3-pytest
176s   python3-scipy python3-sympy python3-tk python3-ufolib2 python3-unicodedata2
176s   tk8.6-blt2.5 unicode-data x11-common
176s 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded.
176s Need to get 87.3 MB/87.3 MB of archives.
176s After this operation, 463 MB of additional disk space will be used.
176s Get:1 /tmp/autopkgtest.bVPpxP/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [720 B]
176s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB]
177s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB]
177s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB]
178s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB]
178s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB]
178s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB]
178s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB]
178s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB]
178s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B]
178s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.14-1 [944 kB]
178s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7 [778 kB]
178s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el blt ppc64el 2.5.3+dfsg-7 [4832 B]
178s Get:14 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lyx all 2.4.0~RC3-1 [170 kB]
178s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB]
178s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB]
178s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB]
179s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB]
179s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB]
179s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB]
179s Get:21 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhtscodecs2 ppc64el 1.6.0-1 [110 kB]
179s Get:22 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhts3 ppc64el 1.18+ds-1 [553 kB]
179s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libimagequant0 ppc64el 2.18.0-1 [42.5 kB]
179s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB]
179s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B]
179s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
179s Get:27 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
179s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB]
179s Get:29 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1 [32.8 kB]
179s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el liblcms2-2 ppc64el 2.14-2 [243 kB]
179s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB]
179s Get:32 http://ftpmaster.internal/ubuntu noble/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6 [220 kB]
179s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el libraqm0 ppc64el 0.10.1-1 [18.9 kB]
179s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB]
179s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB]
179s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB]
179s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB]
179s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpdemux2 ppc64el 1.3.2-0.4 [14.4 kB]
179s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpmux3 ppc64el 1.3.2-0.4 [31.2 kB]
179s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1 [192 kB]
179s Get:41 http://ftpmaster.internal/ubuntu noble/universe ppc64el python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB]
180s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB]
180s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-dateutil all 2.8.2-3 [79.2 kB]
180s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libopenjp2-7 ppc64el 2.5.0-2 [233 kB]
180s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-pil ppc64el 10.2.0-1 [526 kB]
180s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-tk ppc64el 3.11.5-1 [116 kB]
180s Get:47 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pil.imagetk ppc64el 10.2.0-1 [10.1 kB]
180s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.24.2-2 [5581 kB]
180s Get:49 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-contourpy ppc64el 1.0.7-1build2 [300 kB]
180s Get:50 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-cycler all 0.11.0-2 [8202 B]
180s Get:51 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-brotli ppc64el 1.1.0-2 [420 kB]
180s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB]
180s Get:53 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-scipy ppc64el 1.11.4-6 [21.4 MB]
181s Get:54 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB]
181s Get:55 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-mpmath all 1.2.1-3 [421 kB]
181s Get:56 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sympy all 1.12-7 [3966 kB]
181s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fs all 2.4.16-3 [91.1 kB]
181s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-lxml ppc64el 5.1.0-1 [2191 kB]
181s Get:59 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build2 [28.8 kB]
181s Get:60 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-unicodedata2 ppc64el 15.1.0+ds-1 [368 kB]
181s Get:61 http://ftpmaster.internal/ubuntu noble/universe ppc64el unicode-data all 15.1.0-1 [8878 kB]
181s Get:62 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fonttools ppc64el 4.46.0-1 [1746 kB]
181s Get:63 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-kiwisolver ppc64el 1.4.4-2 [55.8 kB]
181s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-packaging all 23.2-1 [40.6 kB]
181s Get:65 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-matplotlib ppc64el 3.6.3-1ubuntu3 [7651 kB]
182s Get:66 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas-lib ppc64el 2.1.4+dfsg-4ubuntu2 [8837 kB]
182s Get:67 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB]
182s Get:68 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-bioframe all 0.4.1-1 [76.1 kB]
182s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-colorama all 0.4.6-4 [32.1 kB]
182s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-click all 8.1.6-1 [79.0 kB]
182s Get:71 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B]
182s Get:72 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pysam ppc64el 0.22.0+ds-1 [5037 kB]
182s Get:73 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pairtools ppc64el 1.0.3-1 [276 kB]
182s Get:74 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pluggy all 1.4.0-1 [20.4 kB]
182s Get:75 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pytest all 7.4.4-1 [305 kB]
182s Fetched 87.3 MB in 6s (14.1 MB/s)
182s Selecting previously unselected package libtcl8.6:ppc64el.
183s (Reading database ... 
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183s Preparing to unpack .../00-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ...
183s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ...
183s Selecting previously unselected package fonts-dejavu-mono.
183s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
183s Unpacking fonts-dejavu-mono (2.37-8) ...
183s Selecting previously unselected package fonts-dejavu-core.
183s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
183s Unpacking fonts-dejavu-core (2.37-8) ...
183s Selecting previously unselected package fontconfig-config.
183s Preparing to unpack .../03-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ...
183s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
183s Selecting previously unselected package libfontconfig1:ppc64el.
183s Preparing to unpack .../04-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ...
183s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ...
183s Selecting previously unselected package libxrender1:ppc64el.
183s Preparing to unpack .../05-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ...
183s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ...
183s Selecting previously unselected package libxft2:ppc64el.
183s Preparing to unpack .../06-libxft2_2.3.6-1_ppc64el.deb ...
183s Unpacking libxft2:ppc64el (2.3.6-1) ...
183s Selecting previously unselected package x11-common.
183s Preparing to unpack .../07-x11-common_1%3a7.7+23ubuntu2_all.deb ...
183s Unpacking x11-common (1:7.7+23ubuntu2) ...
183s Selecting previously unselected package libxss1:ppc64el.
183s Preparing to unpack .../08-libxss1_1%3a1.2.3-1build2_ppc64el.deb ...
183s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ...
183s Selecting previously unselected package libtk8.6:ppc64el.
183s Preparing to unpack .../09-libtk8.6_8.6.14-1_ppc64el.deb ...
183s Unpacking libtk8.6:ppc64el (8.6.14-1) ...
183s Selecting previously unselected package tk8.6-blt2.5.
183s Preparing to unpack .../10-tk8.6-blt2.5_2.5.3+dfsg-7_ppc64el.deb ...
183s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ...
183s Selecting previously unselected package blt.
183s Preparing to unpack .../11-blt_2.5.3+dfsg-7_ppc64el.deb ...
183s Unpacking blt (2.5.3+dfsg-7) ...
183s Selecting previously unselected package fonts-lyx.
183s Preparing to unpack .../12-fonts-lyx_2.4.0~RC3-1_all.deb ...
183s Unpacking fonts-lyx (2.4.0~RC3-1) ...
183s Selecting previously unselected package libblas3:ppc64el.
183s Preparing to unpack .../13-libblas3_3.12.0-3_ppc64el.deb ...
183s Unpacking libblas3:ppc64el (3.12.0-3) ...
183s Selecting previously unselected package libdeflate0:ppc64el.
183s Preparing to unpack .../14-libdeflate0_1.19-1_ppc64el.deb ...
183s Unpacking libdeflate0:ppc64el (1.19-1) ...
183s Selecting previously unselected package libgfortran5:ppc64el.
183s Preparing to unpack .../15-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ...
183s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ...
183s Selecting previously unselected package libgomp1:ppc64el.
183s Preparing to unpack .../16-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ...
183s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ...
183s Selecting previously unselected package libgraphite2-3:ppc64el.
183s Preparing to unpack .../17-libgraphite2-3_1.3.14-2_ppc64el.deb ...
183s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ...
183s Selecting previously unselected package libharfbuzz0b:ppc64el.
183s Preparing to unpack .../18-libharfbuzz0b_8.3.0-2_ppc64el.deb ...
183s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ...
183s Selecting previously unselected package libhtscodecs2:ppc64el.
183s Preparing to unpack .../19-libhtscodecs2_1.6.0-1_ppc64el.deb ...
183s Unpacking libhtscodecs2:ppc64el (1.6.0-1) ...
183s Selecting previously unselected package libhts3:ppc64el.
183s Preparing to unpack .../20-libhts3_1.18+ds-1_ppc64el.deb ...
183s Unpacking libhts3:ppc64el (1.18+ds-1) ...
183s Selecting previously unselected package libimagequant0:ppc64el.
183s Preparing to unpack .../21-libimagequant0_2.18.0-1_ppc64el.deb ...
183s Unpacking libimagequant0:ppc64el (2.18.0-1) ...
183s Selecting previously unselected package libjpeg-turbo8:ppc64el.
183s Preparing to unpack .../22-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ...
183s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ...
183s Selecting previously unselected package libjpeg8:ppc64el.
183s Preparing to unpack .../23-libjpeg8_8c-2ubuntu11_ppc64el.deb ...
183s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ...
183s Selecting previously unselected package libjs-jquery.
183s Preparing to unpack .../24-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
183s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
183s Selecting previously unselected package libjs-jquery-ui.
183s Preparing to unpack .../25-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
183s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
183s Selecting previously unselected package liblapack3:ppc64el.
183s Preparing to unpack .../26-liblapack3_3.12.0-3_ppc64el.deb ...
183s Unpacking liblapack3:ppc64el (3.12.0-3) ...
183s Selecting previously unselected package liblbfgsb0:ppc64el.
183s Preparing to unpack .../27-liblbfgsb0_3.0+dfsg.4-1_ppc64el.deb ...
183s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1) ...
183s Selecting previously unselected package liblcms2-2:ppc64el.
183s Preparing to unpack .../28-liblcms2-2_2.14-2_ppc64el.deb ...
183s Unpacking liblcms2-2:ppc64el (2.14-2) ...
183s Selecting previously unselected package liblerc4:ppc64el.
183s Preparing to unpack .../29-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ...
183s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ...
183s Selecting previously unselected package libqhull-r8.0:ppc64el.
183s Preparing to unpack .../30-libqhull-r8.0_2020.2-6_ppc64el.deb ...
183s Unpacking libqhull-r8.0:ppc64el (2020.2-6) ...
183s Selecting previously unselected package libraqm0:ppc64el.
183s Preparing to unpack .../31-libraqm0_0.10.1-1_ppc64el.deb ...
183s Unpacking libraqm0:ppc64el (0.10.1-1) ...
183s Selecting previously unselected package libsharpyuv0:ppc64el.
184s Preparing to unpack .../32-libsharpyuv0_1.3.2-0.4_ppc64el.deb ...
184s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ...
184s Selecting previously unselected package libjbig0:ppc64el.
184s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ...
184s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ...
184s Selecting previously unselected package libwebp7:ppc64el.
184s Preparing to unpack .../34-libwebp7_1.3.2-0.4_ppc64el.deb ...
184s Unpacking libwebp7:ppc64el (1.3.2-0.4) ...
184s Selecting previously unselected package libtiff6:ppc64el.
184s Preparing to unpack .../35-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ...
184s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ...
184s Selecting previously unselected package libwebpdemux2:ppc64el.
184s Preparing to unpack .../36-libwebpdemux2_1.3.2-0.4_ppc64el.deb ...
184s Unpacking libwebpdemux2:ppc64el (1.3.2-0.4) ...
184s Selecting previously unselected package libwebpmux3:ppc64el.
184s Preparing to unpack .../37-libwebpmux3_1.3.2-0.4_ppc64el.deb ...
184s Unpacking libwebpmux3:ppc64el (1.3.2-0.4) ...
184s Selecting previously unselected package libxslt1.1:ppc64el.
184s Preparing to unpack .../38-libxslt1.1_1.1.39-0exp1_ppc64el.deb ...
184s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1) ...
184s Selecting previously unselected package python-matplotlib-data.
184s Preparing to unpack .../39-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ...
184s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ...
184s Selecting previously unselected package python3-appdirs.
184s Preparing to unpack .../40-python3-appdirs_1.4.4-4_all.deb ...
184s Unpacking python3-appdirs (1.4.4-4) ...
184s Selecting previously unselected package python3-dateutil.
184s Preparing to unpack .../41-python3-dateutil_2.8.2-3_all.deb ...
184s Unpacking python3-dateutil (2.8.2-3) ...
184s Selecting previously unselected package libopenjp2-7:ppc64el.
184s Preparing to unpack .../42-libopenjp2-7_2.5.0-2_ppc64el.deb ...
184s Unpacking libopenjp2-7:ppc64el (2.5.0-2) ...
184s Selecting previously unselected package python3-pil:ppc64el.
184s Preparing to unpack .../43-python3-pil_10.2.0-1_ppc64el.deb ...
184s Unpacking python3-pil:ppc64el (10.2.0-1) ...
184s Selecting previously unselected package python3-tk:ppc64el.
184s Preparing to unpack .../44-python3-tk_3.11.5-1_ppc64el.deb ...
184s Unpacking python3-tk:ppc64el (3.11.5-1) ...
184s Selecting previously unselected package python3-pil.imagetk:ppc64el.
184s Preparing to unpack .../45-python3-pil.imagetk_10.2.0-1_ppc64el.deb ...
184s Unpacking python3-pil.imagetk:ppc64el (10.2.0-1) ...
184s Selecting previously unselected package python3-numpy.
184s Preparing to unpack .../46-python3-numpy_1%3a1.24.2-2_ppc64el.deb ...
184s Unpacking python3-numpy (1:1.24.2-2) ...
184s Selecting previously unselected package python3-contourpy.
184s Preparing to unpack .../47-python3-contourpy_1.0.7-1build2_ppc64el.deb ...
184s Unpacking python3-contourpy (1.0.7-1build2) ...
184s Selecting previously unselected package python3-cycler.
184s Preparing to unpack .../48-python3-cycler_0.11.0-2_all.deb ...
184s Unpacking python3-cycler (0.11.0-2) ...
184s Selecting previously unselected package python3-brotli.
184s Preparing to unpack .../49-python3-brotli_1.1.0-2_ppc64el.deb ...
184s Unpacking python3-brotli (1.1.0-2) ...
184s Selecting previously unselected package python3-decorator.
184s Preparing to unpack .../50-python3-decorator_5.1.1-5_all.deb ...
184s Unpacking python3-decorator (5.1.1-5) ...
184s Selecting previously unselected package python3-scipy.
184s Preparing to unpack .../51-python3-scipy_1.11.4-6_ppc64el.deb ...
184s Unpacking python3-scipy (1.11.4-6) ...
185s Selecting previously unselected package python3-ufolib2.
185s Preparing to unpack .../52-python3-ufolib2_0.16.0+dfsg1-1_all.deb ...
185s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ...
185s Selecting previously unselected package python3-mpmath.
185s Preparing to unpack .../53-python3-mpmath_1.2.1-3_all.deb ...
185s Unpacking python3-mpmath (1.2.1-3) ...
185s Selecting previously unselected package python3-sympy.
185s Preparing to unpack .../54-python3-sympy_1.12-7_all.deb ...
185s Unpacking python3-sympy (1.12-7) ...
186s Selecting previously unselected package python3-fs.
186s Preparing to unpack .../55-python3-fs_2.4.16-3_all.deb ...
186s Unpacking python3-fs (2.4.16-3) ...
186s Selecting previously unselected package python3-lxml:ppc64el.
186s Preparing to unpack .../56-python3-lxml_5.1.0-1_ppc64el.deb ...
186s Unpacking python3-lxml:ppc64el (5.1.0-1) ...
186s Selecting previously unselected package python3-lz4.
186s Preparing to unpack .../57-python3-lz4_4.0.2+dfsg-1build2_ppc64el.deb ...
186s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ...
186s Selecting previously unselected package python3-unicodedata2.
186s Preparing to unpack .../58-python3-unicodedata2_15.1.0+ds-1_ppc64el.deb ...
186s Unpacking python3-unicodedata2 (15.1.0+ds-1) ...
186s Selecting previously unselected package unicode-data.
186s Preparing to unpack .../59-unicode-data_15.1.0-1_all.deb ...
186s Unpacking unicode-data (15.1.0-1) ...
186s Selecting previously unselected package python3-fonttools.
186s Preparing to unpack .../60-python3-fonttools_4.46.0-1_ppc64el.deb ...
186s Unpacking python3-fonttools (4.46.0-1) ...
186s Selecting previously unselected package python3-kiwisolver.
186s Preparing to unpack .../61-python3-kiwisolver_1.4.4-2_ppc64el.deb ...
186s Unpacking python3-kiwisolver (1.4.4-2) ...
186s Selecting previously unselected package python3-packaging.
186s Preparing to unpack .../62-python3-packaging_23.2-1_all.deb ...
186s Unpacking python3-packaging (23.2-1) ...
186s Selecting previously unselected package python3-matplotlib.
186s Preparing to unpack .../63-python3-matplotlib_3.6.3-1ubuntu3_ppc64el.deb ...
186s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ...
186s Selecting previously unselected package python3-pandas-lib:ppc64el.
186s Preparing to unpack .../64-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_ppc64el.deb ...
186s Unpacking python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ...
187s Selecting previously unselected package python3-pandas.
187s Preparing to unpack .../65-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ...
187s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ...
187s Selecting previously unselected package python3-bioframe.
187s Preparing to unpack .../66-python3-bioframe_0.4.1-1_all.deb ...
187s Unpacking python3-bioframe (0.4.1-1) ...
187s Selecting previously unselected package python3-colorama.
187s Preparing to unpack .../67-python3-colorama_0.4.6-4_all.deb ...
187s Unpacking python3-colorama (0.4.6-4) ...
187s Selecting previously unselected package python3-click.
187s Preparing to unpack .../68-python3-click_8.1.6-1_all.deb ...
187s Unpacking python3-click (8.1.6-1) ...
187s Selecting previously unselected package python3-iniconfig.
187s Preparing to unpack .../69-python3-iniconfig_1.1.1-2_all.deb ...
187s Unpacking python3-iniconfig (1.1.1-2) ...
187s Selecting previously unselected package python3-pysam.
187s Preparing to unpack .../70-python3-pysam_0.22.0+ds-1_ppc64el.deb ...
187s Unpacking python3-pysam (0.22.0+ds-1) ...
187s Selecting previously unselected package python3-pairtools.
187s Preparing to unpack .../71-python3-pairtools_1.0.3-1_ppc64el.deb ...
187s Unpacking python3-pairtools (1.0.3-1) ...
187s Selecting previously unselected package python3-pluggy.
187s Preparing to unpack .../72-python3-pluggy_1.4.0-1_all.deb ...
187s Unpacking python3-pluggy (1.4.0-1) ...
187s Selecting previously unselected package python3-pytest.
187s Preparing to unpack .../73-python3-pytest_7.4.4-1_all.deb ...
187s Unpacking python3-pytest (7.4.4-1) ...
188s Selecting previously unselected package autopkgtest-satdep.
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188s Unpacking autopkgtest-satdep (0) ...
188s Setting up libhtscodecs2:ppc64el (1.6.0-1) ...
188s Setting up libgraphite2-3:ppc64el (1.3.14-2) ...
188s Setting up liblcms2-2:ppc64el (2.14-2) ...
188s Setting up python3-iniconfig (1.1.1-2) ...
188s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ...
188s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ...
188s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ...
188s Setting up python3-colorama (0.4.6-4) ...
188s Setting up python3-lz4 (4.0.2+dfsg-1build2) ...
188s Setting up python3-unicodedata2 (15.1.0+ds-1) ...
188s Setting up fonts-lyx (2.4.0~RC3-1) ...
188s Setting up x11-common (1:7.7+23ubuntu2) ...
188s Setting up libdeflate0:ppc64el (1.19-1) ...
188s Setting up libqhull-r8.0:ppc64el (2020.2-6) ...
188s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ...
188s Setting up python3-click (8.1.6-1) ...
189s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ...
189s Setting up unicode-data (15.1.0-1) ...
189s Setting up python3-decorator (5.1.1-5) ...
189s Setting up libblas3:ppc64el (3.12.0-3) ...
189s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode
189s Setting up python3-packaging (23.2-1) ...
189s Setting up python3-brotli (1.1.0-2) ...
189s Setting up python3-cycler (0.11.0-2) ...
189s Setting up libimagequant0:ppc64el (2.18.0-1) ...
189s Setting up fonts-dejavu-mono (2.37-8) ...
189s Setting up python3-kiwisolver (1.4.4-2) ...
189s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ...
189s Setting up fonts-dejavu-core (2.37-8) ...
189s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ...
189s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ...
189s Setting up python3-pluggy (1.4.0-1) ...
190s Setting up libwebp7:ppc64el (1.3.2-0.4) ...
190s Setting up libxslt1.1:ppc64el (1.1.39-0exp1) ...
190s Setting up libopenjp2-7:ppc64el (2.5.0-2) ...
190s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ...
190s Setting up python3-dateutil (2.8.2-3) ...
190s Setting up libxss1:ppc64el (1:1.2.3-1build2) ...
190s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
190s Setting up python3-mpmath (1.2.1-3) ...
190s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ...
190s Setting up libwebpmux3:ppc64el (1.3.2-0.4) ...
190s Setting up python3-appdirs (1.4.4-4) ...
190s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ...
190s Setting up python3-sympy (1.12-7) ...
196s Setting up liblapack3:ppc64el (3.12.0-3) ...
196s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode
196s Setting up libhts3:ppc64el (1.18+ds-1) ...
196s Setting up python3-pysam (0.22.0+ds-1) ...
196s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
196s Setting up python3-pytest (7.4.4-1) ...
197s Setting up libwebpdemux2:ppc64el (1.3.2-0.4) ...
197s Setting up python3-fs (2.4.16-3) ...
197s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
197s Setting up libraqm0:ppc64el (0.10.1-1) ...
197s Setting up python3-numpy (1:1.24.2-2) ...
199s Setting up python3-lxml:ppc64el (5.1.0-1) ...
199s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ...
199s Setting up python3-contourpy (1.0.7-1build2) ...
199s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ...
199s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1) ...
199s Setting up libxft2:ppc64el (2.3.6-1) ...
199s Setting up python3-scipy (1.11.4-6) ...
203s Setting up libtk8.6:ppc64el (8.6.14-1) ...
203s Setting up python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ...
203s Setting up python3-pil:ppc64el (10.2.0-1) ...
203s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ...
208s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
208s Setting up blt (2.5.3+dfsg-7) ...
208s Setting up python3-tk:ppc64el (3.11.5-1) ...
208s Setting up python3-pil.imagetk:ppc64el (10.2.0-1) ...
208s Setting up python3-fonttools (4.46.0-1) ...
209s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
209s Setting up python3-matplotlib (3.6.3-1ubuntu3) ...
211s Setting up python3-bioframe (0.4.1-1) ...
211s Setting up python3-pairtools (1.0.3-1) ...
211s /usr/lib/python3/dist-packages/pairtools/cli/select.py:90: SyntaxWarning: invalid escape sequence '\d'
211s   """Select pairs according to some condition.
211s /usr/lib/python3/dist-packages/pairtools/lib/stats.py:928: SyntaxWarning: invalid escape sequence '\w'
211s   """Extract the name of the tile for each read name in the series
211s Setting up autopkgtest-satdep (0) ...
211s Processing triggers for libc-bin (2.39-0ubuntu6) ...
211s Processing triggers for man-db (2.12.0-3) ...
215s (Reading database ... 79131 files and directories currently installed.)
215s Removing autopkgtest-satdep (0) ...
215s autopkgtest [15:28:17]: test upstream-tests: [-----------------------
215s 
215s rm -rf pairtools
215s 
215s pytest-3 --ignore=.pc
216s ============================= test session starts ==============================
216s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0
216s rootdir: /tmp/autopkgtest.bVPpxP/build.SlZ/src
216s configfile: pytest.ini
216s testpaths: tests
216s collected 31 items
216s 
220s tests/test_dedup.py .                                                    [  3%]
223s tests/test_filterbycov.py .                                              [  6%]
224s tests/test_flip.py .                                                     [  9%]
225s tests/test_header.py .                                                   [ 12%]
225s tests/test_headerops.py .......                                          [ 35%]
226s tests/test_markasdup.py .                                                [ 38%]
230s tests/test_merge.py .                                                    [ 41%]
232s tests/test_parse.py ...                                                  [ 51%]
234s tests/test_parse2.py ..                                                  [ 58%]
235s tests/test_restrict.py .                                                 [ 61%]
236s tests/test_scaling.py .                                                  [ 64%]
243s tests/test_select.py .......                                             [ 87%]
244s tests/test_sort.py .                                                     [ 90%]
245s tests/test_split.py .                                                    [ 93%]
251s tests/test_stats.py ..                                                   [100%]
251s 
251s =============================== warnings summary ===============================
251s ../../../../usr/lib/python3/dist-packages/pairtools/lib/fileio.py:2
251s   /usr/lib/python3/dist-packages/pairtools/lib/fileio.py:2: DeprecationWarning: 'pipes' is deprecated and slated for removal in Python 3.13
251s     import pipes
251s 
251s ../../../../usr/lib/python3/dist-packages/dateutil/tz/tz.py:37
251s   /usr/lib/python3/dist-packages/dateutil/tz/tz.py:37: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC).
251s     EPOCH = datetime.datetime.utcfromtimestamp(0)
251s 
251s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
251s ======================= 31 passed, 2 warnings in 35.01s ========================
251s 
251s ALL PASS
251s echo ALL PASS
251s autopkgtest [15:28:53]: test upstream-tests: -----------------------]
251s upstream-tests       PASS
251s autopkgtest [15:28:53]: test upstream-tests:  - - - - - - - - - - results - - - - - - - - - -
252s autopkgtest [15:28:54]: @@@@@@@@@@@@@@@@@@@@ summary
252s upstream-tests       PASS
263s Creating nova instance adt-noble-ppc64el-pairtools-20240323-152442-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240323.img (UUID ff8abf95-5243-4ea5-b7f5-3bf690534a1d)...