0s autopkgtest [23:51:25]: starting date and time: 2024-04-18 23:51:25+0000 0s autopkgtest [23:51:25]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline 0s autopkgtest [23:51:25]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.kszet_cb/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:gsl --apt-upgrade mlpy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=gsl/2.7.1+dfsg-6ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-9.secgroup --name adt-noble-ppc64el-mlpy-20240418-235125-juju-7f2275-prod-proposed-migration-environment-2-2dfddbbf-9190-4269-be88-27ffe82d3d91 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 144s autopkgtest [23:53:49]: testbed dpkg architecture: ppc64el 144s autopkgtest [23:53:49]: testbed apt version: 2.7.14build2 144s autopkgtest [23:53:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 145s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 145s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB] 145s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [381 kB] 146s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [57.5 kB] 146s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B] 146s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [112 kB] 146s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 146s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [976 B] 146s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 146s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [587 kB] 146s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 146s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [1004 B] 146s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 149s Fetched 1282 kB in 2s (724 kB/s) 149s Reading package lists... 151s sh: 4: dhclient: not found 152s Reading package lists... 152s Building dependency tree... 152s Reading state information... 152s Calculating upgrade... 153s The following packages will be upgraded: 153s libkeyutils1 libnuma1 make netcat-openbsd numactl 153s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 153s Need to get 343 kB of archives. 153s After this operation, 16.4 kB disk space will be freed. 153s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el libkeyutils1 ppc64el 1.6.3-3build1 [11.0 kB] 153s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el netcat-openbsd ppc64el 1.226-1ubuntu2 [46.2 kB] 153s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libnuma1 ppc64el 2.0.18-1build1 [28.2 kB] 153s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el make ppc64el 4.3-4.1build2 [214 kB] 153s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el numactl ppc64el 2.0.18-1build1 [43.9 kB] 154s Fetched 343 kB in 1s (528 kB/s) 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71981 files and directories currently installed.) 154s Preparing to unpack .../libkeyutils1_1.6.3-3build1_ppc64el.deb ... 154s Unpacking libkeyutils1:ppc64el (1.6.3-3build1) over (1.6.3-3) ... 154s Preparing to unpack .../netcat-openbsd_1.226-1ubuntu2_ppc64el.deb ... 154s Unpacking netcat-openbsd (1.226-1ubuntu2) over (1.226-1ubuntu1) ... 154s Preparing to unpack .../libnuma1_2.0.18-1build1_ppc64el.deb ... 154s Unpacking libnuma1:ppc64el (2.0.18-1build1) over (2.0.18-1) ... 154s Preparing to unpack .../make_4.3-4.1build2_ppc64el.deb ... 154s Unpacking make (4.3-4.1build2) over (4.3-4.1build1) ... 154s Preparing to unpack .../numactl_2.0.18-1build1_ppc64el.deb ... 154s Unpacking numactl (2.0.18-1build1) over (2.0.18-1) ... 154s Setting up libkeyutils1:ppc64el (1.6.3-3build1) ... 154s Setting up netcat-openbsd (1.226-1ubuntu2) ... 154s Setting up make (4.3-4.1build2) ... 154s Setting up libnuma1:ppc64el (2.0.18-1build1) ... 154s Setting up numactl (2.0.18-1build1) ... 154s Processing triggers for man-db (2.12.0-4build1) ... 155s Processing triggers for libc-bin (2.39-0ubuntu8) ... 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 156s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 156s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 156s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 156s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 156s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 158s Reading package lists... 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Calculating upgrade... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 162s autopkgtest [23:54:07]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP Thu Apr 4 22:47:57 UTC 2024 162s autopkgtest [23:54:07]: @@@@@@@@@@@@@@@@@@@@ apt-source mlpy 166s Get:1 http://ftpmaster.internal/ubuntu noble/universe mlpy 3.5.0+ds-3build1 (dsc) [2321 B] 166s Get:2 http://ftpmaster.internal/ubuntu noble/universe mlpy 3.5.0+ds-3build1 (tar) [1472 kB] 166s Get:3 http://ftpmaster.internal/ubuntu noble/universe mlpy 3.5.0+ds-3build1 (diff) [13.3 kB] 166s gpgv: Signature made Wed Apr 10 18:41:37 2024 UTC 166s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 166s gpgv: Can't check signature: No public key 166s dpkg-source: warning: cannot verify inline signature for ./mlpy_3.5.0+ds-3build1.dsc: no acceptable signature found 166s autopkgtest [23:54:11]: testing package mlpy version 3.5.0+ds-3build1 167s autopkgtest [23:54:12]: build not needed 168s autopkgtest [23:54:13]: test autodep8-python3: preparing testbed 169s Reading package lists... 169s Building dependency tree... 169s Reading state information... 170s Starting pkgProblemResolver with broken count: 0 170s Starting 2 pkgProblemResolver with broken count: 0 170s Done 170s The following additional packages will be installed: 170s libblas3 libgfortran5 libgsl27 libgslcblas0 liblapack3 liblbfgsb0 170s python3-all python3-decorator python3-mlpy python3-mlpy-lib python3-numpy 170s python3-scipy 170s Suggested packages: 170s gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html python3-mvpa gcc 170s gfortran python3-dev python3-pytest python-scipy-doc 170s Recommended packages: 170s g++ | c++-compiler python3-pil 170s The following NEW packages will be installed: 170s autopkgtest-satdep libblas3 libgfortran5 libgsl27 libgslcblas0 liblapack3 170s liblbfgsb0 python3-all python3-decorator python3-mlpy python3-mlpy-lib 170s python3-numpy python3-scipy 170s 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. 170s Need to get 26.7 MB/26.7 MB of archives. 170s After this operation, 115 MB of additional disk space will be used. 170s Get:1 /tmp/autopkgtest.ICaCFA/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 170s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3build1 [227 kB] 171s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240412-0ubuntu1 [574 kB] 171s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libgslcblas0 ppc64el 2.7.1+dfsg-6ubuntu2 [86.6 kB] 171s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libgsl27 ppc64el 2.7.1+dfsg-6ubuntu2 [1090 kB] 172s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3build1 [2804 kB] 173s Get:7 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1 [32.8 kB] 173s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-all ppc64el 3.12.3-0ubuntu1 [888 B] 173s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 173s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-6ubuntu1 [4446 kB] 173s Get:11 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-scipy ppc64el 1.11.4-6build1 [17.0 MB] 175s Get:12 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-mlpy-lib ppc64el 3.5.0+ds-3build1 [396 kB] 175s Get:13 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-mlpy all 3.5.0+ds-3build1 [31.6 kB] 175s Fetched 26.7 MB in 5s (5386 kB/s) 175s Selecting previously unselected package libblas3:ppc64el. 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71981 files and directories currently installed.) 175s Preparing to unpack .../00-libblas3_3.12.0-3build1_ppc64el.deb ... 175s Unpacking libblas3:ppc64el (3.12.0-3build1) ... 175s Selecting previously unselected package libgfortran5:ppc64el. 175s Preparing to unpack .../01-libgfortran5_14-20240412-0ubuntu1_ppc64el.deb ... 175s Unpacking libgfortran5:ppc64el (14-20240412-0ubuntu1) ... 175s Selecting previously unselected package libgslcblas0:ppc64el. 175s Preparing to unpack .../02-libgslcblas0_2.7.1+dfsg-6ubuntu2_ppc64el.deb ... 175s Unpacking libgslcblas0:ppc64el (2.7.1+dfsg-6ubuntu2) ... 175s Selecting previously unselected package libgsl27:ppc64el. 175s Preparing to unpack .../03-libgsl27_2.7.1+dfsg-6ubuntu2_ppc64el.deb ... 175s Unpacking libgsl27:ppc64el (2.7.1+dfsg-6ubuntu2) ... 175s Selecting previously unselected package liblapack3:ppc64el. 175s Preparing to unpack .../04-liblapack3_3.12.0-3build1_ppc64el.deb ... 175s Unpacking liblapack3:ppc64el (3.12.0-3build1) ... 175s Selecting previously unselected package liblbfgsb0:ppc64el. 175s Preparing to unpack .../05-liblbfgsb0_3.0+dfsg.4-1_ppc64el.deb ... 175s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 175s Selecting previously unselected package python3-all. 175s Preparing to unpack .../06-python3-all_3.12.3-0ubuntu1_ppc64el.deb ... 175s Unpacking python3-all (3.12.3-0ubuntu1) ... 175s Selecting previously unselected package python3-decorator. 175s Preparing to unpack .../07-python3-decorator_5.1.1-5_all.deb ... 175s Unpacking python3-decorator (5.1.1-5) ... 175s Selecting previously unselected package python3-numpy. 175s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-6ubuntu1_ppc64el.deb ... 175s Unpacking python3-numpy (1:1.26.4+ds-6ubuntu1) ... 176s Selecting previously unselected package python3-scipy. 176s Preparing to unpack .../09-python3-scipy_1.11.4-6build1_ppc64el.deb ... 176s Unpacking python3-scipy (1.11.4-6build1) ... 176s Selecting previously unselected package python3-mlpy-lib:ppc64el. 176s Preparing to unpack .../10-python3-mlpy-lib_3.5.0+ds-3build1_ppc64el.deb ... 176s Unpacking python3-mlpy-lib:ppc64el (3.5.0+ds-3build1) ... 176s Selecting previously unselected package python3-mlpy. 176s Preparing to unpack .../11-python3-mlpy_3.5.0+ds-3build1_all.deb ... 176s Unpacking python3-mlpy (3.5.0+ds-3build1) ... 177s Selecting previously unselected package autopkgtest-satdep. 177s Preparing to unpack .../12-1-autopkgtest-satdep.deb ... 177s Unpacking autopkgtest-satdep (0) ... 177s Setting up libgslcblas0:ppc64el (2.7.1+dfsg-6ubuntu2) ... 177s Setting up libgsl27:ppc64el (2.7.1+dfsg-6ubuntu2) ... 177s Setting up python3-all (3.12.3-0ubuntu1) ... 177s Setting up python3-decorator (5.1.1-5) ... 177s Setting up libblas3:ppc64el (3.12.0-3build1) ... 177s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 177s Setting up libgfortran5:ppc64el (14-20240412-0ubuntu1) ... 177s Setting up liblapack3:ppc64el (3.12.0-3build1) ... 177s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 177s Setting up python3-numpy (1:1.26.4+ds-6ubuntu1) ... 179s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 179s Setting up python3-scipy (1.11.4-6build1) ... 184s Setting up python3-mlpy-lib:ppc64el (3.5.0+ds-3build1) ... 184s Setting up python3-mlpy (3.5.0+ds-3build1) ... 184s /usr/lib/python3/dist-packages/mlpy/dimred.py:276: SyntaxWarning: invalid escape sequence '\l' 184s """Kernel Principal Component Analysis, PCA in 184s /usr/lib/python3/dist-packages/mlpy/elasticnet.py:34: SyntaxWarning: invalid escape sequence '\|' 184s """Elastic Net Regularization via Iterative Soft Thresholding. 184s /usr/lib/python3/dist-packages/mlpy/elasticnet.py:117: SyntaxWarning: invalid escape sequence '\|' 184s """Elastic Net Regularization via Iterative Soft Thresholding. 184s /usr/lib/python3/dist-packages/mlpy/fastcluster/fastcluster.py:80: SyntaxWarning: invalid escape sequence '\s' 184s '''Hierarchical, agglomerative clustering on a dissimilarity matrix or on 184s /usr/lib/python3/dist-packages/mlpy/fastcluster/fastcluster.py:237: SyntaxWarning: invalid escape sequence '\c' 184s raise ValueError('The length of the condensed distance matrix must be (k \choose 2) for k data points!') 184s /usr/lib/python3/dist-packages/mlpy/fastcluster/fastcluster.py:274: SyntaxWarning: invalid escape sequence '\s' 184s '''Hierarchical (agglomerative) clustering on Euclidean data. 184s /usr/lib/python3/dist-packages/mlpy/wavelet/continuous.py:252: SyntaxWarning: "is not" with 'int' literal. Did you mean "!="? 184s if x_arr.ndim is not 1: 184s /usr/lib/python3/dist-packages/mlpy/wavelet/continuous.py:255: SyntaxWarning: "is not" with 'int' literal. Did you mean "!="? 184s if scales_arr.ndim is not 1: 184s Setting up autopkgtest-satdep (0) ... 184s Processing triggers for man-db (2.12.0-4build1) ... 184s Processing triggers for libc-bin (2.39-0ubuntu8) ... 186s (Reading database ... 74336 files and directories currently installed.) 186s Removing autopkgtest-satdep (0) ... 187s autopkgtest [23:54:32]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import mlpy; print(mlpy)" ; done 187s autopkgtest [23:54:32]: test autodep8-python3: [----------------------- 187s Testing with python3.12: 187s 188s autopkgtest [23:54:33]: test autodep8-python3: -----------------------] 188s autodep8-python3 PASS (superficial) 188s autopkgtest [23:54:33]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 189s autopkgtest [23:54:34]: @@@@@@@@@@@@@@@@@@@@ summary 189s autodep8-python3 PASS (superficial) 200s Creating nova instance adt-noble-ppc64el-mlpy-20240418-235125-juju-7f2275-prod-proposed-migration-environment-2-2dfddbbf-9190-4269-be88-27ffe82d3d91 from image adt/ubuntu-noble-ppc64el-server-20240418.img (UUID eb57e9e5-70fe-4878-ae85-dd88e864cb24)...