0s autopkgtest [13:57:30]: starting date and time: 2024-03-23 13:57:30+0000 0s autopkgtest [13:57:30]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [13:57:30]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.tcnkxygq/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-pysam,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade insilicoseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python-pysam/0.22.0+ds-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-ppc64el-4.secgroup --name adt-noble-ppc64el-insilicoseq-20240323-135730-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 182s autopkgtest [14:00:32]: testbed dpkg architecture: ppc64el 182s autopkgtest [14:00:32]: testbed apt version: 2.7.12 182s autopkgtest [14:00:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 183s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 183s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 184s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 184s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3992 kB] 184s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 184s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [659 kB] 184s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 184s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 184s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 184s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4250 kB] 184s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 184s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [60.8 kB] 184s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 187s Fetched 9651 kB in 2s (4147 kB/s) 187s Reading package lists... 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 190s Calculating upgrade... 191s The following packages will be REMOVED: 191s libssl3 191s The following NEW packages will be installed: 191s libssl3t64 191s The following packages have been kept back: 191s curl 191s The following packages will be upgraded: 191s cloud-init fonts-ubuntu-console libbsd0 libc-bin libc6 locales openssl 191s python3-markupsafe 191s 8 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 191s Need to get 12.1 MB of archives. 191s After this operation, 10.2 kB of additional disk space will be used. 191s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6 ppc64el 2.39-0ubuntu6 [3274 kB] 192s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-bin ppc64el 2.39-0ubuntu6 [751 kB] 192s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu2 [1026 kB] 192s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu2 [2125 kB] 192s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libbsd0 ppc64el 0.12.1-1 [56.9 kB] 192s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el locales all 2.39-0ubuntu6 [4232 kB] 193s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 193s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-markupsafe ppc64el 2.1.5-1build1 [13.2 kB] 193s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el cloud-init all 24.1.2-0ubuntu1 [597 kB] 193s Preconfiguring packages ... 193s Fetched 12.1 MB in 2s (5641 kB/s) 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 193s Preparing to unpack .../libc6_2.39-0ubuntu6_ppc64el.deb ... 193s Unpacking libc6:ppc64el (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 194s Setting up libc6:ppc64el (2.39-0ubuntu6) ... 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 194s Preparing to unpack .../libc-bin_2.39-0ubuntu6_ppc64el.deb ... 194s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 194s Setting up libc-bin (2.39-0ubuntu6) ... 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 194s Preparing to unpack .../openssl_3.0.13-0ubuntu2_ppc64el.deb ... 194s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 194s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 194s wget depends on libssl3 (>= 3.0.0). 194s tnftp depends on libssl3 (>= 3.0.0). 194s tcpdump depends on libssl3 (>= 3.0.0). 194s systemd-resolved depends on libssl3 (>= 3.0.0). 194s systemd depends on libssl3 (>= 3.0.0). 194s sudo depends on libssl3 (>= 3.0.0). 194s rsync depends on libssl3 (>= 3.0.0). 194s python3-cryptography depends on libssl3 (>= 3.0.0). 194s openssh-server depends on libssl3 (>= 3.0.10). 194s openssh-client depends on libssl3 (>= 3.0.10). 194s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 194s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 194s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 194s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 194s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 194s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 194s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 194s libnvme1 depends on libssl3 (>= 3.0.0). 194s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 194s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 194s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 194s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 194s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 194s kmod depends on libssl3 (>= 3.0.0). 194s dhcpcd-base depends on libssl3 (>= 3.0.0). 194s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 194s 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 194s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 194s Selecting previously unselected package libssl3t64:ppc64el. 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70146 files and directories currently installed.) 194s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu2_ppc64el.deb ... 194s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu2) ... 195s Preparing to unpack .../1-libbsd0_0.12.1-1_ppc64el.deb ... 195s Unpacking libbsd0:ppc64el (0.12.1-1) over (0.11.8-1) ... 195s Preparing to unpack .../2-locales_2.39-0ubuntu6_all.deb ... 195s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 195s Preparing to unpack .../3-fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 195s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 195s Preparing to unpack .../4-python3-markupsafe_2.1.5-1build1_ppc64el.deb ... 195s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 195s Preparing to unpack .../5-cloud-init_24.1.2-0ubuntu1_all.deb ... 195s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 195s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 195s Setting up cloud-init (24.1.2-0ubuntu1) ... 197s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu2) ... 197s Setting up locales (2.39-0ubuntu6) ... 197s Generating locales (this might take a while)... 198s en_US.UTF-8... done 198s Generation complete. 198s Setting up python3-markupsafe (2.1.5-1build1) ... 199s Setting up openssl (3.0.13-0ubuntu2) ... 199s Setting up libbsd0:ppc64el (0.12.1-1) ... 199s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 199s Processing triggers for man-db (2.12.0-3) ... 200s Processing triggers for libc-bin (2.39-0ubuntu6) ... 200s Reading package lists... 200s Building dependency tree... 200s Reading state information... 200s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 201s sh: Attempting to set up Debian/Ubuntu apt sources automatically 201s sh: Distribution appears to be Ubuntu 202s Reading package lists... 202s Building dependency tree... 202s Reading state information... 202s eatmydata is already the newest version (131-1). 202s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 202s Reading package lists... 202s Building dependency tree... 202s Reading state information... 203s dbus is already the newest version (1.14.10-4ubuntu1). 203s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 203s Reading package lists... 203s Building dependency tree... 203s Reading state information... 203s rng-tools-debian is already the newest version (2.4). 203s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 203s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s The following packages will be REMOVED: 204s cloud-init* python3-configobj* python3-debconf* 204s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 204s After this operation, 3256 kB disk space will be freed. 204s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70158 files and directories currently installed.) 204s Removing cloud-init (24.1.2-0ubuntu1) ... 205s Removing python3-configobj (5.0.8-3) ... 205s Removing python3-debconf (1.5.86) ... 205s Processing triggers for man-db (2.12.0-3) ... 205s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69769 files and directories currently installed.) 205s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 206s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 206s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 206s invoke-rc.d: policy-rc.d denied execution of try-restart. 206s Reading package lists... 206s Building dependency tree... 206s Reading state information... 206s linux-generic is already the newest version (6.8.0-11.11+1). 206s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 207s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 207s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 207s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 210s Reading package lists... 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s Calculating upgrade... 210s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 211s autopkgtest [14:01:01]: rebooting testbed after setup commands that affected boot 385s autopkgtest [14:03:55]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 387s autopkgtest [14:03:57]: @@@@@@@@@@@@@@@@@@@@ apt-source insilicoseq 391s Get:1 http://ftpmaster.internal/ubuntu noble/universe insilicoseq 2.0.0-1 (dsc) [2411 B] 391s Get:2 http://ftpmaster.internal/ubuntu noble/universe insilicoseq 2.0.0-1 (tar) [4591 kB] 391s Get:3 http://ftpmaster.internal/ubuntu noble/universe insilicoseq 2.0.0-1 (diff) [5272 B] 391s gpgv: Signature made Sun Feb 18 09:47:08 2024 UTC 391s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 391s gpgv: issuer "emollier@debian.org" 391s gpgv: Can't check signature: No public key 391s dpkg-source: warning: cannot verify inline signature for ./insilicoseq_2.0.0-1.dsc: no acceptable signature found 391s autopkgtest [14:04:01]: testing package insilicoseq version 2.0.0-1 391s autopkgtest [14:04:01]: build not needed 392s autopkgtest [14:04:02]: test run-unit-test: preparing testbed 394s Reading package lists... 394s Building dependency tree... 394s Reading state information... 394s Starting pkgProblemResolver with broken count: 0 394s Starting 2 pkgProblemResolver with broken count: 0 394s Done 394s The following additional packages will be installed: 394s fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono 394s fonts-urw-base35 insilicoseq libblas3 libcairo2 libdeflate0 libfontconfig1 394s libfontenc1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3 394s libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 394s liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 libpixman-1-0 libraqm0 394s libsharpyuv0 libtiff6 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 394s libxcb-shm0 libxrender1 python3-all python3-biopython python3-cairo 394s python3-decorator python3-freetype python3-iniconfig python3-numpy 394s python3-packaging python3-pil python3-pluggy python3-pysam python3-pytest 394s python3-reportlab python3-rlpycairo python3-scipy sgml-base w3c-sgml-lib 394s x11-common xfonts-encodings xfonts-utils xml-core 394s Suggested packages: 394s fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre liblcms2-utils 394s python3-tk bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle3 394s phylip phyml prank probcons python3-mysqldb python3-matplotlib python3-mmtf 394s python3-rdflib python3-psycopg2 raxml samtools t-coffee wise gcc gfortran 394s python3-dev python-pil-doc pdf-viewer python3-egenix-mxtexttools 394s python-reportlab-doc rl-accel rl-renderpm python-scipy-doc sgml-base-doc 394s debhelper 394s Recommended packages: 394s python-biopython-doc ncbi-blast+ python3-olefile g++ | c++-compiler 394s The following NEW packages will be installed: 394s autopkgtest-satdep fontconfig-config fonts-dejavu-core fonts-dejavu-extra 394s fonts-dejavu-mono fonts-urw-base35 insilicoseq libblas3 libcairo2 394s libdeflate0 libfontconfig1 libfontenc1 libgfortran5 libgomp1 libgraphite2-3 394s libharfbuzz0b libhts3 libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8 394s libjpeg8 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 394s libpixman-1-0 libraqm0 libsharpyuv0 libtiff6 libwebp7 libwebpdemux2 394s libwebpmux3 libxcb-render0 libxcb-shm0 libxrender1 python3-all 394s python3-biopython python3-cairo python3-decorator python3-freetype 394s python3-iniconfig python3-numpy python3-packaging python3-pil python3-pluggy 394s python3-pysam python3-pytest python3-reportlab python3-rlpycairo 394s python3-scipy sgml-base w3c-sgml-lib x11-common xfonts-encodings 394s xfonts-utils xml-core 394s 0 upgraded, 58 newly installed, 0 to remove and 0 not upgraded. 394s Need to get 63.5 MB/63.5 MB of archives. 394s After this operation, 289 MB of additional disk space will be used. 394s Get:1 /tmp/autopkgtest.Pf9qgC/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [724 B] 394s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el sgml-base all 1.31 [11.4 kB] 395s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 395s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 395s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontenc1 ppc64el 1:1.1.8-1 [15.7 kB] 395s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 395s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 395s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el xfonts-utils ppc64el 1:7.7+6build2 [112 kB] 395s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-urw-base35 all 20200910-8 [11.0 MB] 397s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 397s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-extra all 2.37-8 [1947 kB] 397s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 397s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 397s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 397s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.24.2-2 [5581 kB] 398s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 398s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libimagequant0 ppc64el 2.18.0-1 [42.5 kB] 398s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 398s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 398s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el liblcms2-2 ppc64el 2.14-2 [243 kB] 398s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libopenjp2-7 ppc64el 2.5.0-2 [233 kB] 398s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 398s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 398s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libraqm0 ppc64el 0.10.1-1 [18.9 kB] 398s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 398s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 398s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 398s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 398s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 398s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 398s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpdemux2 ppc64el 1.3.2-0.4 [14.4 kB] 398s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpmux3 ppc64el 1.3.2-0.4 [31.2 kB] 398s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-pil ppc64el 10.2.0-1 [526 kB] 398s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 398s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 398s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 398s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 398s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 398s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 398s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-cairo ppc64el 1.25.1-2 [162 kB] 398s Get:41 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-freetype all 2.4.0-1 [83.1 kB] 398s Get:42 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-rlpycairo all 0.3.0-3 [9130 B] 398s Get:43 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-reportlab all 4.1.0-1 [683 kB] 398s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el xml-core all 0.19 [20.3 kB] 398s Get:45 http://ftpmaster.internal/ubuntu noble/universe ppc64el w3c-sgml-lib all 1.3-3 [280 kB] 398s Get:46 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-biopython ppc64el 1.81+dfsg-3 [1738 kB] 398s Get:47 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhtscodecs2 ppc64el 1.6.0-1 [110 kB] 398s Get:48 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhts3 ppc64el 1.18+ds-1 [553 kB] 398s Get:49 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pysam ppc64el 0.22.0+ds-1 [5037 kB] 398s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 398s Get:51 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1 [32.8 kB] 398s Get:52 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-scipy ppc64el 1.11.4-6 [21.4 MB] 399s Get:53 http://ftpmaster.internal/ubuntu noble/universe ppc64el insilicoseq all 2.0.0-1 [4247 kB] 400s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-all ppc64el 3.12.1-0ubuntu2 [904 B] 400s Get:55 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 400s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-packaging all 23.2-1 [40.6 kB] 400s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pluggy all 1.4.0-1 [20.4 kB] 400s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pytest all 7.4.4-1 [305 kB] 400s Fetched 63.5 MB in 5s (12.0 MB/s) 400s Selecting previously unselected package sgml-base. 400s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69714 files and directories currently installed.) 400s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 400s Unpacking sgml-base (1.31) ... 400s Selecting previously unselected package fonts-dejavu-mono. 400s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 400s Unpacking fonts-dejavu-mono (2.37-8) ... 400s Selecting previously unselected package fonts-dejavu-core. 400s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 400s Unpacking fonts-dejavu-core (2.37-8) ... 400s Selecting previously unselected package libfontenc1:ppc64el. 400s Preparing to unpack .../03-libfontenc1_1%3a1.1.8-1_ppc64el.deb ... 400s Unpacking libfontenc1:ppc64el (1:1.1.8-1) ... 400s Selecting previously unselected package x11-common. 400s Preparing to unpack .../04-x11-common_1%3a7.7+23ubuntu2_all.deb ... 400s Unpacking x11-common (1:7.7+23ubuntu2) ... 400s Selecting previously unselected package xfonts-encodings. 400s Preparing to unpack .../05-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 400s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 400s Selecting previously unselected package xfonts-utils. 400s Preparing to unpack .../06-xfonts-utils_1%3a7.7+6build2_ppc64el.deb ... 400s Unpacking xfonts-utils (1:7.7+6build2) ... 400s Selecting previously unselected package fonts-urw-base35. 400s Preparing to unpack .../07-fonts-urw-base35_20200910-8_all.deb ... 400s Unpacking fonts-urw-base35 (20200910-8) ... 400s Selecting previously unselected package fontconfig-config. 400s Preparing to unpack .../08-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 401s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 401s Selecting previously unselected package fonts-dejavu-extra. 401s Preparing to unpack .../09-fonts-dejavu-extra_2.37-8_all.deb ... 401s Unpacking fonts-dejavu-extra (2.37-8) ... 401s Selecting previously unselected package libblas3:ppc64el. 401s Preparing to unpack .../10-libblas3_3.12.0-3_ppc64el.deb ... 401s Unpacking libblas3:ppc64el (3.12.0-3) ... 401s Selecting previously unselected package libgfortran5:ppc64el. 401s Preparing to unpack .../11-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 401s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 401s Selecting previously unselected package liblapack3:ppc64el. 401s Preparing to unpack .../12-liblapack3_3.12.0-3_ppc64el.deb ... 401s Unpacking liblapack3:ppc64el (3.12.0-3) ... 401s Selecting previously unselected package python3-numpy. 401s Preparing to unpack .../13-python3-numpy_1%3a1.24.2-2_ppc64el.deb ... 401s Unpacking python3-numpy (1:1.24.2-2) ... 401s Selecting previously unselected package libgomp1:ppc64el. 401s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 401s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 401s Selecting previously unselected package libimagequant0:ppc64el. 401s Preparing to unpack .../15-libimagequant0_2.18.0-1_ppc64el.deb ... 401s Unpacking libimagequant0:ppc64el (2.18.0-1) ... 401s Selecting previously unselected package libjpeg-turbo8:ppc64el. 401s Preparing to unpack .../16-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 401s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 401s Selecting previously unselected package libjpeg8:ppc64el. 401s Preparing to unpack .../17-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 401s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 401s Selecting previously unselected package liblcms2-2:ppc64el. 401s Preparing to unpack .../18-liblcms2-2_2.14-2_ppc64el.deb ... 401s Unpacking liblcms2-2:ppc64el (2.14-2) ... 401s Selecting previously unselected package libopenjp2-7:ppc64el. 401s Preparing to unpack .../19-libopenjp2-7_2.5.0-2_ppc64el.deb ... 401s Unpacking libopenjp2-7:ppc64el (2.5.0-2) ... 401s Selecting previously unselected package libgraphite2-3:ppc64el. 401s Preparing to unpack .../20-libgraphite2-3_1.3.14-2_ppc64el.deb ... 401s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 401s Selecting previously unselected package libharfbuzz0b:ppc64el. 401s Preparing to unpack .../21-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 401s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 401s Selecting previously unselected package libraqm0:ppc64el. 401s Preparing to unpack .../22-libraqm0_0.10.1-1_ppc64el.deb ... 401s Unpacking libraqm0:ppc64el (0.10.1-1) ... 401s Selecting previously unselected package libdeflate0:ppc64el. 401s Preparing to unpack .../23-libdeflate0_1.19-1_ppc64el.deb ... 401s Unpacking libdeflate0:ppc64el (1.19-1) ... 401s Selecting previously unselected package libjbig0:ppc64el. 401s Preparing to unpack .../24-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 401s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 401s Selecting previously unselected package liblerc4:ppc64el. 401s Preparing to unpack .../25-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 401s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 401s Selecting previously unselected package libsharpyuv0:ppc64el. 401s Preparing to unpack .../26-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 401s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 401s Selecting previously unselected package libwebp7:ppc64el. 401s Preparing to unpack .../27-libwebp7_1.3.2-0.4_ppc64el.deb ... 401s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 401s Selecting previously unselected package libtiff6:ppc64el. 401s Preparing to unpack .../28-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 401s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 401s Selecting previously unselected package libwebpdemux2:ppc64el. 401s Preparing to unpack .../29-libwebpdemux2_1.3.2-0.4_ppc64el.deb ... 401s Unpacking libwebpdemux2:ppc64el (1.3.2-0.4) ... 401s Selecting previously unselected package libwebpmux3:ppc64el. 401s Preparing to unpack .../30-libwebpmux3_1.3.2-0.4_ppc64el.deb ... 401s Unpacking libwebpmux3:ppc64el (1.3.2-0.4) ... 401s Selecting previously unselected package python3-pil:ppc64el. 401s Preparing to unpack .../31-python3-pil_10.2.0-1_ppc64el.deb ... 401s Unpacking python3-pil:ppc64el (10.2.0-1) ... 401s Selecting previously unselected package libfontconfig1:ppc64el. 401s Preparing to unpack .../32-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 401s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 401s Selecting previously unselected package libpixman-1-0:ppc64el. 401s Preparing to unpack .../33-libpixman-1-0_0.42.2-1_ppc64el.deb ... 401s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 401s Selecting previously unselected package libxcb-render0:ppc64el. 401s Preparing to unpack .../34-libxcb-render0_1.15-1_ppc64el.deb ... 401s Unpacking libxcb-render0:ppc64el (1.15-1) ... 401s Selecting previously unselected package libxcb-shm0:ppc64el. 401s Preparing to unpack .../35-libxcb-shm0_1.15-1_ppc64el.deb ... 401s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 401s Selecting previously unselected package libxrender1:ppc64el. 401s Preparing to unpack .../36-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 401s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 401s Selecting previously unselected package libcairo2:ppc64el. 401s Preparing to unpack .../37-libcairo2_1.18.0-1_ppc64el.deb ... 401s Unpacking libcairo2:ppc64el (1.18.0-1) ... 401s Selecting previously unselected package python3-cairo. 401s Preparing to unpack .../38-python3-cairo_1.25.1-2_ppc64el.deb ... 401s Unpacking python3-cairo (1.25.1-2) ... 401s Selecting previously unselected package python3-freetype. 401s Preparing to unpack .../39-python3-freetype_2.4.0-1_all.deb ... 401s Unpacking python3-freetype (2.4.0-1) ... 402s Selecting previously unselected package python3-rlpycairo. 402s Preparing to unpack .../40-python3-rlpycairo_0.3.0-3_all.deb ... 402s Unpacking python3-rlpycairo (0.3.0-3) ... 402s Selecting previously unselected package python3-reportlab. 402s Preparing to unpack .../41-python3-reportlab_4.1.0-1_all.deb ... 402s Unpacking python3-reportlab (4.1.0-1) ... 402s Selecting previously unselected package xml-core. 402s Preparing to unpack .../42-xml-core_0.19_all.deb ... 402s Unpacking xml-core (0.19) ... 402s Selecting previously unselected package w3c-sgml-lib. 402s Preparing to unpack .../43-w3c-sgml-lib_1.3-3_all.deb ... 402s Unpacking w3c-sgml-lib (1.3-3) ... 402s Selecting previously unselected package python3-biopython. 402s Preparing to unpack .../44-python3-biopython_1.81+dfsg-3_ppc64el.deb ... 402s Unpacking python3-biopython (1.81+dfsg-3) ... 402s Selecting previously unselected package libhtscodecs2:ppc64el. 402s Preparing to unpack .../45-libhtscodecs2_1.6.0-1_ppc64el.deb ... 402s Unpacking libhtscodecs2:ppc64el (1.6.0-1) ... 402s Selecting previously unselected package libhts3:ppc64el. 402s Preparing to unpack .../46-libhts3_1.18+ds-1_ppc64el.deb ... 402s Unpacking libhts3:ppc64el (1.18+ds-1) ... 402s Selecting previously unselected package python3-pysam. 402s Preparing to unpack .../47-python3-pysam_0.22.0+ds-1_ppc64el.deb ... 402s Unpacking python3-pysam (0.22.0+ds-1) ... 402s Selecting previously unselected package python3-decorator. 402s Preparing to unpack .../48-python3-decorator_5.1.1-5_all.deb ... 402s Unpacking python3-decorator (5.1.1-5) ... 402s Selecting previously unselected package liblbfgsb0:ppc64el. 402s Preparing to unpack .../49-liblbfgsb0_3.0+dfsg.4-1_ppc64el.deb ... 402s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 402s Selecting previously unselected package python3-scipy. 402s Preparing to unpack .../50-python3-scipy_1.11.4-6_ppc64el.deb ... 402s Unpacking python3-scipy (1.11.4-6) ... 403s Selecting previously unselected package insilicoseq. 403s Preparing to unpack .../51-insilicoseq_2.0.0-1_all.deb ... 403s Unpacking insilicoseq (2.0.0-1) ... 403s Selecting previously unselected package python3-all. 403s Preparing to unpack .../52-python3-all_3.12.1-0ubuntu2_ppc64el.deb ... 403s Unpacking python3-all (3.12.1-0ubuntu2) ... 403s Selecting previously unselected package python3-iniconfig. 403s Preparing to unpack .../53-python3-iniconfig_1.1.1-2_all.deb ... 403s Unpacking python3-iniconfig (1.1.1-2) ... 403s Selecting previously unselected package python3-packaging. 403s Preparing to unpack .../54-python3-packaging_23.2-1_all.deb ... 403s Unpacking python3-packaging (23.2-1) ... 403s Selecting previously unselected package python3-pluggy. 403s Preparing to unpack .../55-python3-pluggy_1.4.0-1_all.deb ... 403s Unpacking python3-pluggy (1.4.0-1) ... 403s Selecting previously unselected package python3-pytest. 403s Preparing to unpack .../56-python3-pytest_7.4.4-1_all.deb ... 403s Unpacking python3-pytest (7.4.4-1) ... 403s Selecting previously unselected package autopkgtest-satdep. 403s Preparing to unpack .../57-1-autopkgtest-satdep.deb ... 403s Unpacking autopkgtest-satdep (0) ... 403s Setting up libhtscodecs2:ppc64el (1.6.0-1) ... 403s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 403s Setting up liblcms2-2:ppc64el (2.14-2) ... 403s Setting up python3-iniconfig (1.1.1-2) ... 403s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 403s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 403s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 403s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 403s Setting up libxcb-render0:ppc64el (1.15-1) ... 403s Setting up x11-common (1:7.7+23ubuntu2) ... 404s Setting up libdeflate0:ppc64el (1.19-1) ... 404s Setting up python3-all (3.12.1-0ubuntu2) ... 404s Setting up libxcb-shm0:ppc64el (1.15-1) ... 404s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 404s Setting up python3-freetype (2.4.0-1) ... 404s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 404s Setting up python3-decorator (5.1.1-5) ... 404s Setting up libfontenc1:ppc64el (1:1.1.8-1) ... 404s Setting up libblas3:ppc64el (3.12.0-3) ... 404s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 404s Setting up python3-packaging (23.2-1) ... 404s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 404s Setting up libimagequant0:ppc64el (2.18.0-1) ... 404s Setting up fonts-dejavu-mono (2.37-8) ... 404s Setting up fonts-dejavu-core (2.37-8) ... 404s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 404s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 404s Setting up python3-pluggy (1.4.0-1) ... 404s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 404s Setting up fonts-dejavu-extra (2.37-8) ... 404s Setting up libopenjp2-7:ppc64el (2.5.0-2) ... 404s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 404s Setting up sgml-base (1.31) ... 404s Setting up libwebpmux3:ppc64el (1.3.2-0.4) ... 404s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 404s Setting up liblapack3:ppc64el (3.12.0-3) ... 404s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 404s Setting up libhts3:ppc64el (1.18+ds-1) ... 404s Setting up python3-pysam (0.22.0+ds-1) ... 405s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 405s Setting up python3-pytest (7.4.4-1) ... 405s Setting up libwebpdemux2:ppc64el (1.3.2-0.4) ... 405s Setting up xfonts-utils (1:7.7+6build2) ... 405s Setting up libraqm0:ppc64el (0.10.1-1) ... 405s Setting up python3-numpy (1:1.24.2-2) ... 407s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 407s Setting up xml-core (0.19) ... 407s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 407s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 407s Setting up python3-scipy (1.11.4-6) ... 410s Setting up fonts-urw-base35 (20200910-8) ... 410s Setting up libcairo2:ppc64el (1.18.0-1) ... 410s Setting up python3-pil:ppc64el (10.2.0-1) ... 411s Setting up python3-cairo (1.25.1-2) ... 411s Setting up python3-rlpycairo (0.3.0-3) ... 411s Setting up python3-reportlab (4.1.0-1) ... 412s Processing triggers for libc-bin (2.39-0ubuntu6) ... 412s Processing triggers for man-db (2.12.0-3) ... 413s Processing triggers for sgml-base (1.31) ... 413s Setting up w3c-sgml-lib (1.3-3) ... 440s Setting up python3-biopython (1.81+dfsg-3) ... 441s Setting up insilicoseq (2.0.0-1) ... 441s Setting up autopkgtest-satdep (0) ... 444s (Reading database ... 75099 files and directories currently installed.) 444s Removing autopkgtest-satdep (0) ... 444s autopkgtest [14:04:54]: test run-unit-test: [----------------------- 444s Testing with python3.12 in /tmp/autopkgtest.Pf9qgC/autopkgtest_tmp: 445s ============================= test session starts ============================== 445s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3 445s cachedir: .pytest_cache 445s rootdir: /tmp/autopkgtest.Pf9qgC/autopkgtest_tmp 445s collecting ... collected 46 items 445s 445s test/test_abundance.py::test_parsing PASSED [ 2%] 445s test/test_abundance.py::test_parsing_readcounts PASSED [ 4%] 445s test/test_abundance.py::test_parsing_empty PASSED [ 6%] 445s test/test_abundance.py::test_parsing_no_exists PASSED [ 8%] 445s test/test_abundance.py::test_parsing_bad_abundance PASSED [ 10%] 445s test/test_abundance.py::test_cov_calc PASSED [ 13%] 445s test/test_abundance.py::test_distributions PASSED [ 15%] 445s test/test_abundance.py::test_abunance_draft PASSED [ 17%] 445s test/test_abundance.py::test_coverage_scaling PASSED [ 19%] 445s test/test_bam.py::test_read_fail PASSED [ 21%] 445s test/test_bam.py::test_to_model PASSED [ 23%] 445s test/test_download.py::test_ncbi SKIPPED (Test requires Internet.) [ 26%] 445s test/test_error_model.py::test_perfect_phred PASSED [ 28%] 445s test/test_error_model.py::test_basic_phred PASSED [ 30%] 445s test/test_error_model.py::test_kde_phred PASSED [ 32%] 445s test/test_error_model.py::test_introduce_errors PASSED [ 34%] 445s test/test_error_model.py::test_mut_sequence PASSED [ 36%] 445s test/test_error_model.py::test_introduce_indels PASSED [ 39%] 445s test/test_error_model.py::test_adjust_seq_length_extend PASSED [ 41%] 445s test/test_error_model.py::test_introduce_indels_rev PASSED [ 43%] 445s test/test_error_model.py::test_bad_err_mod PASSED [ 45%] 445s test/test_generator.py::test_cleanup_fail PASSED [ 47%] 448s test/test_generator.py::test_simulate_and_save PASSED [ 50%] 451s test/test_generator.py::test_simulate_and_save_short PASSED [ 52%] 451s test/test_generator.py::test_small_input PASSED [ 54%] 451s test/test_generator.py::test_basic PASSED [ 56%] 451s test/test_generator.py::test_kde PASSED [ 58%] 451s test/test_generator.py::test_kde_short PASSED [ 60%] 451s test/test_generator.py::test_amp PASSED [ 63%] 451s test/test_modeller.py::test_kde_qualities PASSED [ 65%] 451s test/test_modeller.py::test_substitutions PASSED [ 67%] 451s test/test_modeller.py::test_indels PASSED [ 69%] 451s test/test_util.py::test_phred_conversions PASSED [ 71%] 451s test/test_util.py::test_rev_comp PASSED [ 73%] 451s test/test_util.py::test_count_records PASSED [ 76%] 451s test/test_util.py::test_count_records_empty PASSED [ 78%] 451s test/test_util.py::test_split_list PASSED [ 80%] 451s test/test_util.py::test_convert_n_reads PASSED [ 82%] 451s test/test_util.py::test_convert_n_reads_bad_not_a_number PASSED [ 84%] 451s test/test_util.py::test_convert_n_reads_bad_suffix PASSED [ 86%] 451s test/test_util.py::test_genome_file_exists PASSED [ 89%] 451s test/test_util.py::test_reservoir PASSED [ 91%] 451s test/test_util.py::test_reservoir_invalid_input PASSED [ 93%] 451s test/test_util.py::test_concatenate PASSED [ 95%] 451s test/test_util.py::test_concatenate_read_only PASSED [ 97%] 451s test/test_util.py::test_compress PASSED [100%] 451s 451s ======================== 45 passed, 1 skipped in 6.22s ========================= 451s autopkgtest [14:05:01]: test run-unit-test: -----------------------] 452s run-unit-test PASS 452s autopkgtest [14:05:02]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 452s autopkgtest [14:05:02]: @@@@@@@@@@@@@@@@@@@@ summary 452s run-unit-test PASS 486s Creating nova instance adt-noble-ppc64el-insilicoseq-20240323-135730-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240321.img (UUID 024d6af5-fcba-4a84-85f9-01f41e1878d6)...