0s autopkgtest [15:18:22]: starting date and time: 2024-03-23 15:18:22+0000 0s autopkgtest [15:18:22]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [15:18:22]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.t_rgje30/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-pysam,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade htseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python-pysam/0.22.0+ds-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos01-ppc64el-15.secgroup --name adt-noble-ppc64el-htseq-20240323-151822-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 181s autopkgtest [15:21:23]: testbed dpkg architecture: ppc64el 182s autopkgtest [15:21:24]: testbed apt version: 2.7.12 182s autopkgtest [15:21:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup 182s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 183s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 183s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [493 kB] 183s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3969 kB] 183s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 183s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [659 kB] 183s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 183s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 183s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 183s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4248 kB] 184s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 184s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [60.8 kB] 184s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 187s Fetched 9623 kB in 3s (3759 kB/s) 187s Reading package lists... 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 190s Calculating upgrade... 190s The following packages will be REMOVED: 190s libssl3 190s The following NEW packages will be installed: 190s libssl3t64 190s The following packages have been kept back: 190s curl 190s The following packages will be upgraded: 190s cloud-init fonts-ubuntu-console libbsd0 libc-bin libc6 locales openssl 190s python3-markupsafe 190s 8 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 190s Need to get 12.1 MB of archives. 190s After this operation, 10.2 kB of additional disk space will be used. 190s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6 ppc64el 2.39-0ubuntu6 [3274 kB] 191s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-bin ppc64el 2.39-0ubuntu6 [751 kB] 191s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu2 [1026 kB] 191s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu2 [2125 kB] 191s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libbsd0 ppc64el 0.12.1-1 [56.9 kB] 191s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el locales all 2.39-0ubuntu6 [4232 kB] 191s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 191s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-markupsafe ppc64el 2.1.5-1build1 [13.2 kB] 191s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el cloud-init all 24.1.2-0ubuntu1 [597 kB] 191s Preconfiguring packages ... 191s Fetched 12.1 MB in 1s (12.4 MB/s) 192s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 192s Preparing to unpack .../libc6_2.39-0ubuntu6_ppc64el.deb ... 192s Unpacking libc6:ppc64el (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 192s Setting up libc6:ppc64el (2.39-0ubuntu6) ... 192s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 192s Preparing to unpack .../libc-bin_2.39-0ubuntu6_ppc64el.deb ... 192s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 192s Setting up libc-bin (2.39-0ubuntu6) ... 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 193s Preparing to unpack .../openssl_3.0.13-0ubuntu2_ppc64el.deb ... 193s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 193s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 193s wget depends on libssl3 (>= 3.0.0). 193s tnftp depends on libssl3 (>= 3.0.0). 193s tcpdump depends on libssl3 (>= 3.0.0). 193s systemd-resolved depends on libssl3 (>= 3.0.0). 193s systemd depends on libssl3 (>= 3.0.0). 193s sudo depends on libssl3 (>= 3.0.0). 193s rsync depends on libssl3 (>= 3.0.0). 193s python3-cryptography depends on libssl3 (>= 3.0.0). 193s openssh-server depends on libssl3 (>= 3.0.10). 193s openssh-client depends on libssl3 (>= 3.0.10). 193s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 193s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 193s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 193s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 193s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 193s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 193s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 193s libnvme1 depends on libssl3 (>= 3.0.0). 193s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 193s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 193s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 193s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 193s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 193s kmod depends on libssl3 (>= 3.0.0). 193s dhcpcd-base depends on libssl3 (>= 3.0.0). 193s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 193s 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70157 files and directories currently installed.) 193s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 193s Selecting previously unselected package libssl3t64:ppc64el. 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70146 files and directories currently installed.) 193s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu2_ppc64el.deb ... 193s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu2) ... 193s Preparing to unpack .../1-libbsd0_0.12.1-1_ppc64el.deb ... 193s Unpacking libbsd0:ppc64el (0.12.1-1) over (0.11.8-1) ... 193s Preparing to unpack .../2-locales_2.39-0ubuntu6_all.deb ... 193s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 193s Preparing to unpack .../3-fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 193s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 193s Preparing to unpack .../4-python3-markupsafe_2.1.5-1build1_ppc64el.deb ... 193s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 193s Preparing to unpack .../5-cloud-init_24.1.2-0ubuntu1_all.deb ... 193s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 193s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 193s Setting up cloud-init (24.1.2-0ubuntu1) ... 195s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu2) ... 195s Setting up locales (2.39-0ubuntu6) ... 195s Generating locales (this might take a while)... 197s en_US.UTF-8... done 197s Generation complete. 197s Setting up python3-markupsafe (2.1.5-1build1) ... 197s Setting up openssl (3.0.13-0ubuntu2) ... 197s Setting up libbsd0:ppc64el (0.12.1-1) ... 197s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 197s Processing triggers for man-db (2.12.0-3) ... 198s Processing triggers for libc-bin (2.39-0ubuntu6) ... 198s Reading package lists... 198s Building dependency tree... 198s Reading state information... 198s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 199s sh: Attempting to set up Debian/Ubuntu apt sources automatically 199s sh: Distribution appears to be Ubuntu 200s Reading package lists... 200s Building dependency tree... 200s Reading state information... 200s eatmydata is already the newest version (131-1). 200s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 200s Reading package lists... 201s Building dependency tree... 201s Reading state information... 201s dbus is already the newest version (1.14.10-4ubuntu1). 201s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 201s Reading package lists... 201s Building dependency tree... 201s Reading state information... 201s rng-tools-debian is already the newest version (2.4). 201s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 201s Reading package lists... 201s Building dependency tree... 201s Reading state information... 201s The following packages will be REMOVED: 201s cloud-init* python3-configobj* python3-debconf* 202s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 202s After this operation, 3256 kB disk space will be freed. 202s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70158 files and directories currently installed.) 202s Removing cloud-init (24.1.2-0ubuntu1) ... 202s Removing python3-configobj (5.0.8-3) ... 202s Removing python3-debconf (1.5.86) ... 202s Processing triggers for man-db (2.12.0-3) ... 203s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69769 files and directories currently installed.) 203s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 203s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 203s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 203s invoke-rc.d: policy-rc.d denied execution of try-restart. 203s Reading package lists... 203s Building dependency tree... 203s Reading state information... 204s linux-generic is already the newest version (6.8.0-11.11+1). 204s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 204s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 204s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 204s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 207s Reading package lists... 207s Reading package lists... 207s Building dependency tree... 207s Reading state information... 207s Calculating upgrade... 207s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 207s Reading package lists... 207s Building dependency tree... 207s Reading state information... 207s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 207s autopkgtest [15:21:49]: rebooting testbed after setup commands that affected boot 363s autopkgtest [15:24:25]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 365s autopkgtest [15:24:27]: @@@@@@@@@@@@@@@@@@@@ apt-source htseq 368s Get:1 http://ftpmaster.internal/ubuntu noble/universe htseq 2.0.5-1 (dsc) [2164 B] 368s Get:2 http://ftpmaster.internal/ubuntu noble/universe htseq 2.0.5-1 (tar) [36.8 MB] 368s Get:3 http://ftpmaster.internal/ubuntu noble/universe htseq 2.0.5-1 (diff) [11.2 kB] 369s gpgv: Signature made Fri Jan 12 05:59:53 2024 UTC 369s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 369s gpgv: issuer "tille@debian.org" 369s gpgv: Can't check signature: No public key 369s dpkg-source: warning: cannot verify inline signature for ./htseq_2.0.5-1.dsc: no acceptable signature found 370s autopkgtest [15:24:32]: testing package htseq version 2.0.5-1 371s autopkgtest [15:24:33]: build not needed 376s autopkgtest [15:24:38]: test autodep8-python3: preparing testbed 386s Reading package lists... 386s Building dependency tree... 386s Reading state information... 386s Starting pkgProblemResolver with broken count: 0 386s Starting 2 pkgProblemResolver with broken count: 0 386s Done 386s The following additional packages will be installed: 386s libblas3 libdeflate0 libgfortran5 libhts3 libhtscodecs2 liblapack3 386s python3-all python3-htseq python3-numpy python3-pysam 386s Suggested packages: 386s gcc gfortran python3-dev python3-pytest 386s The following NEW packages will be installed: 386s autopkgtest-satdep libblas3 libdeflate0 libgfortran5 libhts3 libhtscodecs2 386s liblapack3 python3-all python3-htseq python3-numpy python3-pysam 386s 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. 386s Need to get 15.5 MB/15.5 MB of archives. 386s After this operation, 96.4 MB of additional disk space will be used. 386s Get:1 /tmp/autopkgtest.u0Vm9A/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 387s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 387s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 387s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 387s Get:5 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhtscodecs2 ppc64el 1.6.0-1 [110 kB] 387s Get:6 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhts3 ppc64el 1.18+ds-1 [553 kB] 387s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 388s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-all ppc64el 3.12.1-0ubuntu2 [904 B] 388s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.24.2-2 [5581 kB] 390s Get:10 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pysam ppc64el 0.22.0+ds-1 [5037 kB] 392s Get:11 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-htseq ppc64el 2.0.5-1 [562 kB] 392s Fetched 15.5 MB in 5s (2850 kB/s) 392s Selecting previously unselected package libblas3:ppc64el. 392s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69714 files and directories currently installed.) 392s Preparing to unpack .../00-libblas3_3.12.0-3_ppc64el.deb ... 392s Unpacking libblas3:ppc64el (3.12.0-3) ... 392s Selecting previously unselected package libdeflate0:ppc64el. 392s Preparing to unpack .../01-libdeflate0_1.19-1_ppc64el.deb ... 392s Unpacking libdeflate0:ppc64el (1.19-1) ... 392s Selecting previously unselected package libgfortran5:ppc64el. 392s Preparing to unpack .../02-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 392s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 392s Selecting previously unselected package libhtscodecs2:ppc64el. 392s Preparing to unpack .../03-libhtscodecs2_1.6.0-1_ppc64el.deb ... 392s Unpacking libhtscodecs2:ppc64el (1.6.0-1) ... 392s Selecting previously unselected package libhts3:ppc64el. 392s Preparing to unpack .../04-libhts3_1.18+ds-1_ppc64el.deb ... 392s Unpacking libhts3:ppc64el (1.18+ds-1) ... 392s Selecting previously unselected package liblapack3:ppc64el. 392s Preparing to unpack .../05-liblapack3_3.12.0-3_ppc64el.deb ... 392s Unpacking liblapack3:ppc64el (3.12.0-3) ... 392s Selecting previously unselected package python3-all. 392s Preparing to unpack .../06-python3-all_3.12.1-0ubuntu2_ppc64el.deb ... 392s Unpacking python3-all (3.12.1-0ubuntu2) ... 392s Selecting previously unselected package python3-numpy. 392s Preparing to unpack .../07-python3-numpy_1%3a1.24.2-2_ppc64el.deb ... 392s Unpacking python3-numpy (1:1.24.2-2) ... 393s Selecting previously unselected package python3-pysam. 393s Preparing to unpack .../08-python3-pysam_0.22.0+ds-1_ppc64el.deb ... 393s Unpacking python3-pysam (0.22.0+ds-1) ... 393s Selecting previously unselected package python3-htseq. 393s Preparing to unpack .../09-python3-htseq_2.0.5-1_ppc64el.deb ... 393s Unpacking python3-htseq (2.0.5-1) ... 393s Selecting previously unselected package autopkgtest-satdep. 393s Preparing to unpack .../10-1-autopkgtest-satdep.deb ... 393s Unpacking autopkgtest-satdep (0) ... 393s Setting up libhtscodecs2:ppc64el (1.6.0-1) ... 393s Setting up libdeflate0:ppc64el (1.19-1) ... 393s Setting up python3-all (3.12.1-0ubuntu2) ... 393s Setting up libblas3:ppc64el (3.12.0-3) ... 393s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 393s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 393s Setting up liblapack3:ppc64el (3.12.0-3) ... 393s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 393s Setting up libhts3:ppc64el (1.18+ds-1) ... 393s Setting up python3-pysam (0.22.0+ds-1) ... 393s Setting up python3-numpy (1:1.24.2-2) ... 395s Setting up python3-htseq (2.0.5-1) ... 395s /usr/lib/python3/dist-packages/HTSeq/__init__.py:583: SyntaxWarning: invalid escape sequence '\=' 395s _re_vcf_meta_comment = re.compile("^##([a-zA-Z]+)\=(.*)$") 395s /usr/lib/python3/dist-packages/HTSeq/features.py:14: SyntaxWarning: invalid escape sequence '\s' 395s _re_attr_main = re.compile("\s*([^\s\=]+)[\s=]+(.*)") 395s /usr/lib/python3/dist-packages/HTSeq/features.py:15: SyntaxWarning: invalid escape sequence '\s' 395s _re_attr_empty = re.compile("^\s*$") 395s /usr/lib/python3/dist-packages/HTSeq/features.py:16: SyntaxWarning: invalid escape sequence '\s' 395s _re_gff_meta_comment = re.compile("##\s*(\S+)\s+(\S*)") 395s Setting up autopkgtest-satdep (0) ... 395s Processing triggers for man-db (2.12.0-3) ... 396s Processing triggers for libc-bin (2.39-0ubuntu6) ... 398s (Reading database ... 71175 files and directories currently installed.) 398s Removing autopkgtest-satdep (0) ... 398s autopkgtest [15:25:00]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import HTSeq; print(HTSeq)" ; done 398s autopkgtest [15:25:00]: test autodep8-python3: [----------------------- 399s Testing with python3.12: 399s 399s autopkgtest [15:25:01]: test autodep8-python3: -----------------------] 399s autodep8-python3 PASS (superficial) 399s autopkgtest [15:25:01]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 400s autopkgtest [15:25:02]: @@@@@@@@@@@@@@@@@@@@ summary 400s autodep8-python3 PASS (superficial) 414s Creating nova instance adt-noble-ppc64el-htseq-20240323-151822-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-ppc64el-server-20240321.img (UUID 024d6af5-fcba-4a84-85f9-01f41e1878d6)...