0s autopkgtest [23:14:22]: starting date and time: 2024-04-01 23:14:22+0000
  0s autopkgtest [23:14:22]: git checkout: 31124158 autopkgtest: take Paride's WIP change regarding wrong src pkg selection
  0s autopkgtest [23:14:22]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.u_2d8fli/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:capnproto --apt-upgrade harvest-tools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=capnproto/1.0.1-3build4 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-14.secgroup --name adt-noble-ppc64el-harvest-tools-20240401-231422-juju-7f2275-prod-proposed-migration-environment-3-b3f64d32-1a9c-472b-a8c3-7661fd8ab1bd --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
133s autopkgtest [23:16:35]: testbed dpkg architecture: ppc64el
133s autopkgtest [23:16:35]: testbed apt version: 2.7.14
133s autopkgtest [23:16:35]: @@@@@@@@@@@@@@@@@@@@ test bed setup
134s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
134s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8700 B]
134s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [70.6 kB]
134s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [521 kB]
135s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4254 kB]
136s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [702 kB]
136s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B]
136s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [2292 B]
136s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B]
136s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3179 kB]
137s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B]
137s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [31.0 kB]
137s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B]
140s Fetched 8898 kB in 4s (2464 kB/s)
140s Reading package lists...
143s Reading package lists...
143s Building dependency tree...
143s Reading state information...
143s Calculating upgrade...
143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
143s Reading package lists...
144s Building dependency tree...
144s Reading state information...
144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
144s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease
145s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease
145s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease
145s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease
146s Reading package lists...
146s Reading package lists...
146s Building dependency tree...
146s Reading state information...
147s Calculating upgrade...
147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
147s Reading package lists...
147s Building dependency tree...
147s Reading state information...
147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
150s autopkgtest [23:16:52]: testbed running kernel: Linux 6.8.0-20-generic #20-Ubuntu SMP Mon Mar 18 11:46:05 UTC 2024
150s autopkgtest [23:16:52]: @@@@@@@@@@@@@@@@@@@@ apt-source harvest-tools
153s Get:1 http://ftpmaster.internal/ubuntu noble/universe harvest-tools 1.3-8build4 (dsc) [2246 B]
153s Get:2 http://ftpmaster.internal/ubuntu noble/universe harvest-tools 1.3-8build4 (tar) [3752 kB]
153s Get:3 http://ftpmaster.internal/ubuntu noble/universe harvest-tools 1.3-8build4 (diff) [7432 B]
153s gpgv: Signature made Fri Mar 22 16:18:19 2024 UTC
153s gpgv:                using RSA key 4FB588A84C2DDE79A74C77876FA458DD1DB03F71
153s gpgv:                issuer "juliank@ubuntu.com"
153s gpgv: Can't check signature: No public key
153s dpkg-source: warning: cannot verify inline signature for ./harvest-tools_1.3-8build4.dsc: no acceptable signature found
153s autopkgtest [23:16:55]: testing package harvest-tools version 1.3-8build4
153s autopkgtest [23:16:55]: build not needed
155s autopkgtest [23:16:57]: test run-unit-test: preparing testbed
156s Reading package lists...
156s Building dependency tree...
156s Reading state information...
156s Starting pkgProblemResolver with broken count: 0
156s Starting 2 pkgProblemResolver with broken count: 0
156s Done
157s The following additional packages will be installed:
157s   harvest-tools libcapnp-1.0.1 libprotobuf32t64
157s The following NEW packages will be installed:
157s   autopkgtest-satdep harvest-tools libcapnp-1.0.1 libprotobuf32t64
157s 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded.
157s Need to get 2684 kB/2684 kB of archives.
157s After this operation, 10.5 MB of additional disk space will be used.
157s Get:1 /tmp/autopkgtest.uHowxp/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [712 B]
157s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el libcapnp-1.0.1 ppc64el 1.0.1-3build4 [1562 kB]
158s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libprotobuf32t64 ppc64el 3.21.12-8.2 [981 kB]
158s Get:4 http://ftpmaster.internal/ubuntu noble/universe ppc64el harvest-tools ppc64el 1.3-8build4 [141 kB]
158s Fetched 2684 kB in 1s (2232 kB/s)
158s Selecting previously unselected package libcapnp-1.0.1:ppc64el.
158s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 103426 files and directories currently installed.)
158s Preparing to unpack .../libcapnp-1.0.1_1.0.1-3build4_ppc64el.deb ...
158s Unpacking libcapnp-1.0.1:ppc64el (1.0.1-3build4) ...
158s Selecting previously unselected package libprotobuf32t64:ppc64el.
158s Preparing to unpack .../libprotobuf32t64_3.21.12-8.2_ppc64el.deb ...
158s Unpacking libprotobuf32t64:ppc64el (3.21.12-8.2) ...
158s Selecting previously unselected package harvest-tools.
158s Preparing to unpack .../harvest-tools_1.3-8build4_ppc64el.deb ...
158s Unpacking harvest-tools (1.3-8build4) ...
158s Selecting previously unselected package autopkgtest-satdep.
158s Preparing to unpack .../1-autopkgtest-satdep.deb ...
158s Unpacking autopkgtest-satdep (0) ...
158s Setting up libprotobuf32t64:ppc64el (3.21.12-8.2) ...
158s Setting up libcapnp-1.0.1:ppc64el (1.0.1-3build4) ...
158s Setting up harvest-tools (1.3-8build4) ...
158s Setting up autopkgtest-satdep (0) ...
158s Processing triggers for man-db (2.12.0-3build4) ...
159s Processing triggers for libc-bin (2.39-0ubuntu6) ...
161s (Reading database ... 103453 files and directories currently installed.)
161s Removing autopkgtest-satdep (0) ...
162s autopkgtest [23:17:04]: test run-unit-test: [-----------------------
162s Test 1
162s convert to .ggr file
162s Loading test2.fna...
162s Loading test2.vcf...
162s Loading test2.xmfa...
162s Loading test2.tree...
162s Loading test2.fna...
162s Loading test2.vcf...
162s Loading test2.xmfa...
163s Writing test2.ggr...
164s PASS
164s 
164s Test 2
164s Recover into fna format
164s Loading test2.ggr...
164s zpipe: invalid or incomplete deflate data
164s terminate called after throwing an instance of 'kj::ExceptionImpl'
164s   what():  kj/io.c++:53: failed: expected n >= minBytes [3137634 >= 3327393]; Premature EOF
164s stack: 7e3d2fdf0e7f 7e3d2feba197 7e3d2fe970a3 7e3d2fea82ff 118ce2c3e1c3 118ce2bfc78b 7e3d2f226dcb 7e3d2f22701b
165s /tmp/autopkgtest.uHowxp/build.kt1/src/debian/tests/run-unit-test: line 28:  2287 Aborted                 (core dumped) harvesttools -i test2.ggr -F out.fna
165s autopkgtest [23:17:07]: test run-unit-test: -----------------------]
166s run-unit-test        FAIL non-zero exit status 134
166s autopkgtest [23:17:08]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
166s autopkgtest [23:17:08]: @@@@@@@@@@@@@@@@@@@@ summary
166s run-unit-test        FAIL non-zero exit status 134
178s Creating nova instance adt-noble-ppc64el-harvest-tools-20240401-231422-juju-7f2275-prod-proposed-migration-environment-3-b3f64d32-1a9c-472b-a8c3-7661fd8ab1bd from image adt/ubuntu-noble-ppc64el-server-20240401.img (UUID b81dbf1a-7ee7-48fa-b1bc-be4cdad1394d)...