0s autopkgtest [20:36:42]: starting date and time: 2024-03-25 20:36:42+0000 0s autopkgtest [20:36:42]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [20:36:42]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nqv3xupc/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:harvest-tools,src:protobuf --apt-upgrade harvest-tools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=harvest-tools/1.3-8build4 protobuf/3.21.12-8.2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-6.secgroup --name adt-noble-ppc64el-harvest-tools-20240325-203642-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 103s autopkgtest [20:38:25]: testbed dpkg architecture: ppc64el 103s autopkgtest [20:38:25]: testbed apt version: 2.7.12 103s autopkgtest [20:38:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 105s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 105s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4041 kB] 106s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [497 kB] 106s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [7608 B] 106s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.0 kB] 106s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [700 kB] 106s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 106s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 106s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 106s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4231 kB] 107s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 107s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [61.7 kB] 107s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 110s Fetched 9725 kB in 3s (3111 kB/s) 110s Reading package lists... 113s Reading package lists... 114s Building dependency tree... 114s Reading state information... 117s Calculating upgrade... 117s sh: Attempting to set up Debian/Ubuntu apt sources automatically 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s eatmydata is already the newest version (131-1). 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s sh: Distribution appears to be Ubuntu 117s dbus is already the newest version (1.14.10-4ubuntu1). 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 118s rng-tools-debian is already the newest version (2.4). 118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s The following packages will be REMOVED: 118s cloud-init* python3-configobj* python3-debconf* 119s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 119s After this operation, 3256 kB disk space will be freed. 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70156 files and directories currently installed.) 119s Removing cloud-init (24.1.2-0ubuntu1) ... 119s Removing python3-configobj (5.0.8-3) ... 119s Removing python3-debconf (1.5.86) ... 119s Processing triggers for man-db (2.12.0-3) ... 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69767 files and directories currently installed.) 120s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 121s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 121s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 121s invoke-rc.d: policy-rc.d denied execution of try-restart. 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s linux-generic is already the newest version (6.8.0-11.11+1). 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 122s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 122s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 122s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 125s Reading package lists... 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Calculating upgrade... 126s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 126s Reading package lists... 126s Building dependency tree... 126s Reading state information... 126s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s autopkgtest [20:38:49]: rebooting testbed after setup commands that affected boot 170s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 178s autopkgtest [20:39:40]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 181s autopkgtest [20:39:43]: @@@@@@@@@@@@@@@@@@@@ apt-source harvest-tools 184s Get:1 http://ftpmaster.internal/ubuntu noble/universe harvest-tools 1.3-8build3 (dsc) [2217 B] 184s Get:2 http://ftpmaster.internal/ubuntu noble/universe harvest-tools 1.3-8build3 (tar) [3752 kB] 184s Get:3 http://ftpmaster.internal/ubuntu noble/universe harvest-tools 1.3-8build3 (diff) [7372 B] 184s gpgv: Signature made Fri Oct 27 10:30:43 2023 UTC 184s gpgv: using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9 184s gpgv: Can't check signature: No public key 184s dpkg-source: warning: cannot verify inline signature for ./harvest-tools_1.3-8build3.dsc: no acceptable signature found 184s autopkgtest [20:39:46]: testing package harvest-tools version 1.3-8build3 185s autopkgtest [20:39:47]: build not needed 186s autopkgtest [20:39:48]: test run-unit-test: preparing testbed 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 190s Starting pkgProblemResolver with broken count: 0 190s Starting 2 pkgProblemResolver with broken count: 0 190s Done 191s The following additional packages will be installed: 191s harvest-tools libcapnp-1.0.1 libprotobuf32 191s The following NEW packages will be installed: 191s autopkgtest-satdep harvest-tools libcapnp-1.0.1 libprotobuf32 191s 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 191s Need to get 2665 kB/2666 kB of archives. 191s After this operation, 10.4 MB of additional disk space will be used. 191s Get:1 /tmp/autopkgtest.opDzHb/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [708 B] 191s Get:2 http://ftpmaster.internal/ubuntu noble/universe ppc64el libcapnp-1.0.1 ppc64el 1.0.1-3 [1544 kB] 192s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libprotobuf32 ppc64el 3.21.12-8ubuntu5 [982 kB] 192s Get:4 http://ftpmaster.internal/ubuntu noble/universe ppc64el harvest-tools ppc64el 1.3-8build3 [139 kB] 193s Fetched 2665 kB in 2s (1603 kB/s) 193s Selecting previously unselected package libcapnp-1.0.1:ppc64el. 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69712 files and directories currently installed.) 193s Preparing to unpack .../libcapnp-1.0.1_1.0.1-3_ppc64el.deb ... 193s Unpacking libcapnp-1.0.1:ppc64el (1.0.1-3) ... 193s Selecting previously unselected package libprotobuf32:ppc64el. 193s Preparing to unpack .../libprotobuf32_3.21.12-8ubuntu5_ppc64el.deb ... 193s Unpacking libprotobuf32:ppc64el (3.21.12-8ubuntu5) ... 193s Selecting previously unselected package harvest-tools. 193s Preparing to unpack .../harvest-tools_1.3-8build3_ppc64el.deb ... 193s Unpacking harvest-tools (1.3-8build3) ... 193s Selecting previously unselected package autopkgtest-satdep. 193s Preparing to unpack .../1-autopkgtest-satdep.deb ... 193s Unpacking autopkgtest-satdep (0) ... 193s Setting up libcapnp-1.0.1:ppc64el (1.0.1-3) ... 193s Setting up libprotobuf32:ppc64el (3.21.12-8ubuntu5) ... 193s Setting up harvest-tools (1.3-8build3) ... 193s Setting up autopkgtest-satdep (0) ... 193s Processing triggers for man-db (2.12.0-3) ... 193s Processing triggers for libc-bin (2.39-0ubuntu6) ... 196s (Reading database ... 69738 files and directories currently installed.) 196s Removing autopkgtest-satdep (0) ... 197s autopkgtest [20:39:59]: test run-unit-test: [----------------------- 197s Test 1 197s convert to .ggr file 197s Loading test2.fna... 197s Loading test2.vcf... 197s Loading test2.xmfa... 198s Loading test2.tree... 198s Loading test2.fna... 198s Loading test2.vcf... 198s Loading test2.xmfa... 198s Writing test2.ggr... 199s PASS 199s 199s Test 2 199s Recover into fna format 199s Loading test2.ggr... 199s zpipe: invalid or incomplete deflate data 199s terminate called after throwing an instance of 'kj::ExceptionImpl' 199s what(): kj/io.c++:53: failed: expected n >= minBytes [3121250 >= 3311009]; Premature EOF 199s stack: 6d943bbfcb7f 6d943bccba17 6d943bca6f23 6d943bcb6d8f 4f2a4b0c8e7 4f2a4acc70b 6d943b026dcb 6d943b02701b 200s /tmp/autopkgtest.opDzHb/build.cyd/src/debian/tests/run-unit-test: line 28: 1308 Aborted (core dumped) harvesttools -i test2.ggr -F out.fna 201s autopkgtest [20:40:03]: test run-unit-test: -----------------------] 201s autopkgtest [20:40:03]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 201s run-unit-test FAIL non-zero exit status 134 202s autopkgtest [20:40:04]: @@@@@@@@@@@@@@@@@@@@ summary 202s run-unit-test FAIL non-zero exit status 134 213s Creating nova instance adt-noble-ppc64el-harvest-tools-20240325-203642-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-ppc64el-server-20240325.img (UUID ce50e202-ac12-4562-879d-419903f0141e)...