0s autopkgtest [03:27:41]: starting date and time: 2024-03-23 03:27:41+0000 0s autopkgtest [03:27:41]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [03:27:41]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a9dr8168/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:augustus,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade gffread --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=augustus/3.5.0+dfsg-4build2 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-11.secgroup --name adt-noble-ppc64el-gffread-20240323-032741-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 87s autopkgtest [03:29:08]: testbed dpkg architecture: ppc64el 87s autopkgtest [03:29:08]: testbed apt version: 2.7.12 87s autopkgtest [03:29:08]: @@@@@@@@@@@@@@@@@@@@ test bed setup 88s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 88s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [57.7 kB] 88s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4001 kB] 88s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 88s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [495 kB] 88s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [668 kB] 88s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 88s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 88s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 88s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4262 kB] 89s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 89s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [61.5 kB] 89s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 92s Fetched 9683 kB in 2s (4103 kB/s) 92s Reading package lists... 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s Calculating upgrade... 95s The following packages will be REMOVED: 95s libssl3 95s The following NEW packages will be installed: 95s libssl3t64 95s The following packages have been kept back: 95s curl 95s The following packages will be upgraded: 95s libbsd0 openssl 95s 2 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 95s Need to get 3208 kB of archives. 95s After this operation, 73.7 kB of additional disk space will be used. 95s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu2 [1026 kB] 96s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu2 [2125 kB] 96s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libbsd0 ppc64el 0.12.1-1 [56.9 kB] 96s Fetched 3208 kB in 1s (4592 kB/s) 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70156 files and directories currently installed.) 96s Preparing to unpack .../openssl_3.0.13-0ubuntu2_ppc64el.deb ... 96s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 96s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 96s wget depends on libssl3 (>= 3.0.0). 96s tnftp depends on libssl3 (>= 3.0.0). 96s tcpdump depends on libssl3 (>= 3.0.0). 96s systemd-resolved depends on libssl3 (>= 3.0.0). 96s systemd depends on libssl3 (>= 3.0.0). 96s sudo depends on libssl3 (>= 3.0.0). 96s rsync depends on libssl3 (>= 3.0.0). 96s python3-cryptography depends on libssl3 (>= 3.0.0). 96s openssh-server depends on libssl3 (>= 3.0.10). 96s openssh-client depends on libssl3 (>= 3.0.10). 96s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 96s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 96s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 96s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 96s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 96s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 96s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 96s libnvme1 depends on libssl3 (>= 3.0.0). 96s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 96s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 96s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 96s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 96s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 96s kmod depends on libssl3 (>= 3.0.0). 96s dhcpcd-base depends on libssl3 (>= 3.0.0). 96s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 96s 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70156 files and directories currently installed.) 96s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 96s Selecting previously unselected package libssl3t64:ppc64el. 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70145 files and directories currently installed.) 96s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_ppc64el.deb ... 96s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu2) ... 96s Preparing to unpack .../libbsd0_0.12.1-1_ppc64el.deb ... 96s Unpacking libbsd0:ppc64el (0.12.1-1) over (0.11.8-1) ... 96s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu2) ... 96s Setting up openssl (3.0.13-0ubuntu2) ... 96s Setting up libbsd0:ppc64el (0.12.1-1) ... 96s Processing triggers for man-db (2.12.0-3) ... 97s Processing triggers for libc-bin (2.39-0ubuntu2) ... 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 98s sh: Attempting to set up Debian/Ubuntu apt sources automatically 98s sh: Distribution appears to be Ubuntu 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s eatmydata is already the newest version (131-1). 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 100s dbus is already the newest version (1.14.10-4ubuntu1). 100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 100s rng-tools-debian is already the newest version (2.4). 100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 100s The following packages will be REMOVED: 100s cloud-init* python3-configobj* python3-debconf* 101s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 101s After this operation, 3256 kB disk space will be freed. 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70158 files and directories currently installed.) 101s Removing cloud-init (24.1.2-0ubuntu1) ... 101s Removing python3-configobj (5.0.8-3) ... 101s Removing python3-debconf (1.5.86) ... 101s Processing triggers for man-db (2.12.0-3) ... 102s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69769 files and directories currently installed.) 102s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 102s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 102s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 102s invoke-rc.d: policy-rc.d denied execution of try-restart. 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s linux-generic is already the newest version (6.8.0-11.11+1). 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 103s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 103s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 103s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 105s Reading package lists... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 106s Calculating upgrade... 106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s autopkgtest [03:29:27]: rebooting testbed after setup commands that affected boot 140s autopkgtest [03:30:01]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 142s autopkgtest [03:30:03]: @@@@@@@@@@@@@@@@@@@@ apt-source gffread 144s Get:1 http://ftpmaster.internal/ubuntu noble/universe gffread 0.12.7-4 (dsc) [2440 B] 144s Get:2 http://ftpmaster.internal/ubuntu noble/universe gffread 0.12.7-4 (tar) [404 kB] 144s Get:3 http://ftpmaster.internal/ubuntu noble/universe gffread 0.12.7-4 (diff) [8828 B] 144s gpgv: Signature made Tue Jun 20 19:16:45 2023 UTC 144s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 144s gpgv: issuer "emollier@debian.org" 144s gpgv: Can't check signature: No public key 144s dpkg-source: warning: cannot verify inline signature for ./gffread_0.12.7-4.dsc: no acceptable signature found 144s autopkgtest [03:30:05]: testing package gffread version 0.12.7-4 145s autopkgtest [03:30:06]: build not needed 145s autopkgtest [03:30:06]: test run-tests: preparing testbed 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s Starting pkgProblemResolver with broken count: 0 150s Starting 2 pkgProblemResolver with broken count: 0 150s Done 150s The following additional packages will be installed: 150s apache2 apache2-bin apache2-data apache2-utils augustus-doc bedtools-test 150s bioperl blt bowtie2 cnvkit cutadapt diamond-aligner emboss-data emboss-test 150s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra 150s fonts-dejavu-mono fonts-lyx fonts-urw-base35 gbrowse genometools-common 150s gff2aplot gff2ps gffread htslib-test libalgorithm-diff-perl 150s libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl 150s libapache-dbi-perl libapache2-mod-perl2 libapr1 libaprutil1 150s libaprutil1-dbd-sqlite3 libaprutil1-ldap libbio-coordinate-perl 150s libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl 150s libbio-graphics-perl libbio-perl-perl libblas3 libcairo2 150s libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl 150s libclass-data-inheritable-perl libclone-perl libcommon-sense-perl 150s libdata-stag-perl libdatrie1 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl 150s libdeflate0 libdevel-stacktrace-perl libdevel-symdump-perl 150s libencode-locale-perl libexception-class-perl libexporter-tiny-perl 150s libfile-listing-perl libfontconfig1 libfontenc1 libgclib3 libgd-perl libgd3 150s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhtml-parser-perl 150s libhtml-tagset-perl libhtml-tree-perl libhts3 libhtscodecs2 150s libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl 150s libhttp-message-perl libhttp-negotiate-perl libice6 libimagequant0 150s libio-html-perl libio-socket-ssl-perl libio-string-perl libjbig0 150s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-prototype 150s libjs-scriptaculous libjson-perl liblapack3 liblbfgsb0 liblcms2-2 liblerc4 150s liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.1-0 liblua5.4-0 150s liblwp-mediatypes-perl liblwp-protocol-https-perl libmbedcrypto7 150s libmbedtls14 libmbedx509-1 libnet-http-perl libnet-ssleay-perl libopenjp2-7 150s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 150s libpaper1 libpixman-1-0 libpq5 libqhull-r8.0 libraqm0 libsharpyuv0 libsm6 150s libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl 150s libtcl8.6 libterm-readkey-perl libtest-deep-perl libtest-differences-perl 150s libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl 150s libthai-data libthai0 libtiff6 libtimedate-perl libtk8.6 libtre5 150s libtry-tiny-perl liburi-perl libvm-ec2-perl libwebp7 libwebpdemux2 150s libwebpmux3 libwww-perl libwww-robotrules-perl libxcb-render0 libxcb-shm0 150s libxft2 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl 150s libxml-sax-perl libxml-simple-perl libxpm4 libxrender1 libxslt1.1 libxss1 150s libxt6 ncbi-blast+ ncbi-data optimir perl-openssl-defaults pigz proteinortho 150s python-matplotlib-data python3-appdirs python3-argcomplete python3-argh 150s python3-biopython python3-brotli python3-cairo python3-contourpy 150s python3-cutadapt python3-cycler python3-dateutil python3-decorator 150s python3-dnaio python3-fonttools python3-freetype python3-fs python3-gffutils 150s python3-importlib-metadata python3-joblib python3-kiwisolver python3-lxml 150s python3-lz4 python3-matplotlib python3-more-itertools python3-mpmath 150s python3-networkx python3-numpy python3-packaging python3-pandas 150s python3-pandas-lib python3-pil python3-pil.imagetk python3-pomegranate 150s python3-pybedtools python3-pyfaidx python3-pysam python3-reportlab 150s python3-rlpycairo python3-scipy python3-simplejson python3-sklearn 150s python3-sklearn-lib python3-sympy python3-threadpoolctl python3-tk 150s python3-ufolib2 python3-unicodedata2 python3-xopen python3-zipp r-base-core 150s r-bioc-biocgenerics r-bioc-dnacopy samtools seqan-apps sgml-base sqlite3 150s tk8.6-blt2.5 unicode-data unzip w3c-sgml-lib x11-common xdg-utils 150s xfonts-encodings xfonts-utils xml-core zip 150s Suggested packages: 150s apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser 150s bedtools blt-demo bowtie2-examples valgrind fonts-freefont-otf 150s | fonts-freefont-ttf fonts-texgyre gbrowse-data gbrowse-calign 150s libfile-nfslock-perl postscript-viewer libev-perl libevent-perl 150s libio-async-perl libpoe-perl libtask-weaken-perl libxml-sax-expatxs-perl 150s libmldbm-perl libnet-daemon-perl libsql-statement-perl libgd-tools 150s libdata-dump-perl libio-compress-brotli-perl libjs-jquery-ui-docs 150s liblcms2-utils libcrypt-ssleay-perl tcl8.6 tk8.6 tre-agrep libsub-name-perl 150s libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl debhelper bwa 150s clustalo clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml 150s prank probcons python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 150s raxml t-coffee wise python-cycler-doc python-lxml-doc cm-super-minimal 150s dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 150s librsvg2-common python3-cairocffi python3-gi-cairo python3-gobject 150s python3-pyqt5 python3-sip python3-tornado texlive-extra-utils 150s texlive-latex-extra python-mpmath-doc python3-gmpy2 python-networkx-doc 150s python3-gdal python3-pydot python3-pygraphviz gcc gfortran python3-dev 150s python3-pytest python-pandas-doc python3-statsmodels python-pil-doc 150s python-pomegranate-doc python-pybedtools-doc pdf-viewer 150s python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm 150s python-scipy-doc python3-dap python-sklearn-doc texlive-fonts-extra 150s python-sympy-doc tix python3-tk-dbg elpa-ess r-doc-info | r-doc-pdf 150s r-mathlib r-base-html r-bioc-biobase r-bioc-s4vectors r-bioc-iranges 150s r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools 150s r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-runit 150s cwltool cwltool | cwl-runner sgml-base-doc sqlite3-doc 150s Recommended packages: 150s ssl-cert bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl 150s libyaml-perl libace-perl libxml-twig-perl libset-scalar-perl med-config tcsh 150s | csh | c-shell graphicsmagick | imagemagick ghostscript gv 150s | postscript-viewer libalgorithm-diff-xs-perl libasync-interrupt-perl 150s libev-perl | libevent-perl libguard-perl libapache2-reload-perl 150s libbsd-resource-perl libbio-scf-perl libberkeleydb-perl libgd-svg-perl 150s bioperl-run | libbio-perl-run-perl libalgorithm-munkres-perl 150s libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl 150s libdbd-mysql-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl 150s libpostscript-perl libsoap-lite-perl libsort-naturally-perl 150s libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl 150s libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl 150s libxml-sax-writer-perl libxml-writer-perl libcgi-fast-perl 150s libfreezethaw-perl perl-tk libxml-libxslt-perl libmldbm-perl libxml-perl 150s libhtml-format-perl javascript-common libjson-xs-perl libdata-dump-perl 150s libhtml-form-perl libmailtools-perl libxml-sax-expat-perl r-cran-gridextra 150s r-cran-ggplot2 python-biopython-doc python3-pytest python3-psutil 150s python3-bs4 python3-cssselect python3-html5lib python3-bottleneck 150s python3-numexpr python3-odf python3-openpyxl python3-tables python3-olefile 150s g++ | c++-compiler isympy-common r-recommended r-base-dev r-doc-html 150s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 150s x11-xserver-utils 150s The following NEW packages will be installed: 150s apache2 apache2-bin apache2-data apache2-utils augustus-doc 150s autopkgtest-satdep bedtools-test bioperl blt bowtie2 cnvkit cutadapt 150s diamond-aligner emboss-data emboss-test fontconfig fontconfig-config 150s fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-lyx 150s fonts-urw-base35 gbrowse genometools-common gff2aplot gff2ps gffread 150s htslib-test libalgorithm-diff-perl libanyevent-cachedns-perl 150s libanyevent-http-perl libanyevent-perl libapache-dbi-perl 150s libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 150s libaprutil1-ldap libbio-coordinate-perl libbio-db-biofetch-perl 150s libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl 150s libbio-perl-perl libblas3 libcairo2 libcapture-tiny-perl libcgi-pm-perl 150s libcgi-session-perl libclass-data-inheritable-perl libclone-perl 150s libcommon-sense-perl libdata-stag-perl libdatrie1 libdbd-pg-perl 150s libdbd-sqlite3-perl libdbi-perl libdeflate0 libdevel-stacktrace-perl 150s libdevel-symdump-perl libencode-locale-perl libexception-class-perl 150s libexporter-tiny-perl libfile-listing-perl libfontconfig1 libfontenc1 150s libgclib3 libgd-perl libgd3 libgfortran5 libgomp1 libgraphite2-3 150s libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl 150s libhts3 libhtscodecs2 libhttp-cookies-perl libhttp-daemon-perl 150s libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 150s libimagequant0 libio-html-perl libio-socket-ssl-perl libio-string-perl 150s libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 150s libjs-prototype libjs-scriptaculous libjson-perl liblapack3 liblbfgsb0 150s liblcms2-2 liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl 150s liblua5.1-0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl 150s libmbedcrypto7 libmbedtls14 libmbedx509-1 libnet-http-perl 150s libnet-ssleay-perl libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 150s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpq5 150s libqhull-r8.0 libraqm0 libsharpyuv0 libsm6 libstatistics-descriptive-perl 150s libstring-approx-perl libsub-uplevel-perl libtcl8.6 libterm-readkey-perl 150s libtest-deep-perl libtest-differences-perl libtest-exception-perl 150s libtest-most-perl libtest-warn-perl libtext-diff-perl libthai-data libthai0 150s libtiff6 libtimedate-perl libtk8.6 libtre5 libtry-tiny-perl liburi-perl 150s libvm-ec2-perl libwebp7 libwebpdemux2 libwebpmux3 libwww-perl 150s libwww-robotrules-perl libxcb-render0 libxcb-shm0 libxft2 libxml-libxml-perl 150s libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl 150s libxml-simple-perl libxpm4 libxrender1 libxslt1.1 libxss1 libxt6 ncbi-blast+ 150s ncbi-data optimir perl-openssl-defaults pigz proteinortho 150s python-matplotlib-data python3-appdirs python3-argcomplete python3-argh 150s python3-biopython python3-brotli python3-cairo python3-contourpy 150s python3-cutadapt python3-cycler python3-dateutil python3-decorator 150s python3-dnaio python3-fonttools python3-freetype python3-fs python3-gffutils 150s python3-importlib-metadata python3-joblib python3-kiwisolver python3-lxml 150s python3-lz4 python3-matplotlib python3-more-itertools python3-mpmath 150s python3-networkx python3-numpy python3-packaging python3-pandas 150s python3-pandas-lib python3-pil python3-pil.imagetk python3-pomegranate 150s python3-pybedtools python3-pyfaidx python3-pysam python3-reportlab 150s python3-rlpycairo python3-scipy python3-simplejson python3-sklearn 150s python3-sklearn-lib python3-sympy python3-threadpoolctl python3-tk 150s python3-ufolib2 python3-unicodedata2 python3-xopen python3-zipp r-base-core 150s r-bioc-biocgenerics r-bioc-dnacopy samtools seqan-apps sgml-base sqlite3 150s tk8.6-blt2.5 unicode-data unzip w3c-sgml-lib x11-common xdg-utils 150s xfonts-encodings xfonts-utils xml-core zip 150s 0 upgraded, 233 newly installed, 0 to remove and 0 not upgraded. 150s Need to get 346 MB/346 MB of archives. 150s After this operation, 1773 MB of additional disk space will be used. 150s Get:1 /tmp/autopkgtest.VuGPJv/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [852 B] 151s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libapr1 ppc64el 1.7.2-3 [130 kB] 151s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libaprutil1 ppc64el 1.6.3-1ubuntu1 [110 kB] 151s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libaprutil1-dbd-sqlite3 ppc64el 1.6.3-1ubuntu1 [12.2 kB] 151s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libaprutil1-ldap ppc64el 1.6.3-1ubuntu1 [9186 B] 151s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el liblua5.4-0 ppc64el 5.4.6-3 [216 kB] 151s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el apache2-bin ppc64el 2.4.58-1ubuntu2 [1563 kB] 151s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el apache2-data all 2.4.58-1ubuntu2 [163 kB] 151s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el apache2-utils ppc64el 2.4.58-1ubuntu2 [101 kB] 151s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el apache2 ppc64el 2.4.58-1ubuntu2 [90.2 kB] 151s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el sgml-base all 1.31 [11.4 kB] 151s Get:12 http://ftpmaster.internal/ubuntu noble/universe ppc64el pigz ppc64el 2.8-1 [76.3 kB] 151s Get:13 http://ftpmaster.internal/ubuntu noble/universe ppc64el augustus-doc all 3.5.0+dfsg-4build1 [23.5 MB] 152s Get:14 http://ftpmaster.internal/ubuntu noble/universe ppc64el bedtools-test all 2.31.1+dfsg-2 [18.2 MB] 152s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 152s Get:16 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdata-stag-perl all 0.14-3 [372 kB] 152s Get:17 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-perl-perl all 1.7.8-1 [2580 kB] 152s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libclass-data-inheritable-perl all 0.08-3 [8084 B] 152s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libdevel-stacktrace-perl all 2.0500-1 [22.1 kB] 152s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libexception-class-perl all 1.45-1 [28.6 kB] 152s Get:21 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-deep-perl all 1.204-1 [47.1 kB] 152s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libcapture-tiny-perl all 0.48-2 [20.2 kB] 152s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libalgorithm-diff-perl all 1.201-1 [41.8 kB] 152s Get:24 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtext-diff-perl all 1.45-2 [25.6 kB] 153s Get:25 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-differences-perl all 0.71-1 [15.8 kB] 153s Get:26 http://ftpmaster.internal/ubuntu noble/universe ppc64el libsub-uplevel-perl all 0.2800-3 [11.6 kB] 153s Get:27 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-exception-perl all 0.43-3 [13.4 kB] 153s Get:28 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-warn-perl all 0.37-2 [12.6 kB] 153s Get:29 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-most-perl all 0.38-1 [21.5 kB] 153s Get:30 http://ftpmaster.internal/ubuntu noble/universe ppc64el bioperl all 1.7.8-1 [216 kB] 153s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 153s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 153s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 153s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontenc1 ppc64el 1:1.1.8-1 [15.7 kB] 153s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 153s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 153s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el xfonts-utils ppc64el 1:7.7+6build2 [112 kB] 153s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-urw-base35 all 20200910-8 [11.0 MB] 153s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 153s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 153s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 153s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 153s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 153s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.14-1 [944 kB] 153s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7 [778 kB] 153s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el blt ppc64el 2.5.3+dfsg-7 [4832 B] 153s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 153s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 153s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 153s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-numpy ppc64el 1:1.24.2-2 [5581 kB] 153s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-tk ppc64el 3.11.5-1 [116 kB] 153s Get:52 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pil.imagetk ppc64el 10.2.0-1 [10.1 kB] 153s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 153s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libimagequant0 ppc64el 2.18.0-1 [42.5 kB] 153s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 153s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 153s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el liblcms2-2 ppc64el 2.14-2 [243 kB] 153s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el libopenjp2-7 ppc64el 2.5.0-2 [233 kB] 153s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 153s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 153s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libraqm0 ppc64el 0.10.1-1 [18.9 kB] 153s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 153s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 153s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 153s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 153s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 153s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 154s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpdemux2 ppc64el 1.3.2-0.4 [14.4 kB] 154s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebpmux3 ppc64el 1.3.2-0.4 [31.2 kB] 154s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-pil ppc64el 10.2.0-1 [526 kB] 154s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 154s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 154s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 154s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 154s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-cairo ppc64el 1.25.1-2 [162 kB] 154s Get:76 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-freetype all 2.4.0-1 [83.1 kB] 154s Get:77 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-rlpycairo all 0.3.0-3 [9130 B] 154s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-extra all 2.37-8 [1947 kB] 154s Get:79 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-reportlab all 4.1.0-1 [683 kB] 154s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el xml-core all 0.19 [20.3 kB] 154s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el w3c-sgml-lib all 1.3-3 [280 kB] 154s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-biopython ppc64el 1.81+dfsg-3 [1738 kB] 154s Get:83 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 154s Get:84 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 154s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lyx all 2.4.0~RC3-1 [170 kB] 154s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 154s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-dateutil all 2.8.2-3 [79.2 kB] 154s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-contourpy ppc64el 1.0.7-1build2 [300 kB] 154s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-cycler all 0.11.0-2 [8202 B] 154s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-brotli ppc64el 1.1.0-2 [420 kB] 154s Get:91 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 154s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1 [32.8 kB] 154s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-scipy ppc64el 1.11.4-6 [21.4 MB] 154s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 154s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-mpmath all 1.2.1-3 [421 kB] 154s Get:96 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sympy all 1.12-7 [3966 kB] 155s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 155s Get:98 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fs all 2.4.16-3 [91.1 kB] 155s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1 [192 kB] 155s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-lxml ppc64el 5.1.0-1 [2191 kB] 155s Get:101 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build2 [28.8 kB] 155s Get:102 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-unicodedata2 ppc64el 15.1.0+ds-1 [368 kB] 155s Get:103 http://ftpmaster.internal/ubuntu noble/universe ppc64el unicode-data all 15.1.0-1 [8878 kB] 157s Get:104 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-fonttools ppc64el 4.46.0-1 [1746 kB] 157s Get:105 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-kiwisolver ppc64el 1.4.4-2 [55.8 kB] 157s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-packaging all 23.2-1 [40.6 kB] 157s Get:107 http://ftpmaster.internal/ubuntu noble/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6 [220 kB] 157s Get:108 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-matplotlib ppc64el 3.6.3-1ubuntu3 [7651 kB] 158s Get:109 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas-lib ppc64el 2.1.4+dfsg-4ubuntu2 [8837 kB] 159s Get:110 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 159s Get:111 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-joblib all 1.3.2-1 [207 kB] 159s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-networkx all 2.8.8-1ubuntu1 [1468 kB] 159s Get:113 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pomegranate ppc64el 0.14.8-4 [4495 kB] 159s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-more-itertools all 10.2.0-1 [52.9 kB] 159s Get:115 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-zipp all 1.0.0-6 [6090 B] 159s Get:116 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-importlib-metadata all 4.12.0-1 [17.8 kB] 159s Get:117 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pyfaidx all 0.8.1.1-1 [29.6 kB] 159s Get:118 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhtscodecs2 ppc64el 1.6.0-1 [110 kB] 159s Get:119 http://ftpmaster.internal/ubuntu noble/universe ppc64el libhts3 ppc64el 1.18+ds-1 [553 kB] 159s Get:120 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pysam ppc64el 0.22.0+ds-1 [5037 kB] 160s Get:121 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-threadpoolctl all 3.1.0-1 [21.3 kB] 160s Get:122 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sklearn-lib ppc64el 1.4.1.post1+dfsg-1 [6817 kB] 161s Get:123 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-sklearn all 1.4.1.post1+dfsg-1 [2261 kB] 161s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 161s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 161s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 161s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 161s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 161s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 161s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 161s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 161s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 161s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 161s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 161s Get:135 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 161s Get:136 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 161s Get:137 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 161s Get:138 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 161s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 164s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 164s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-dnacopy ppc64el 1.76.0-1 [387 kB] 164s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el cnvkit ppc64el 0.9.10-1 [20.5 MB] 166s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-xopen all 1.7.0-2 [17.0 kB] 166s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-dnaio ppc64el 1.0.1-1build1 [93.5 kB] 166s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-cutadapt ppc64el 4.4-1build1 [362 kB] 166s Get:146 http://ftpmaster.internal/ubuntu noble/universe ppc64el cutadapt all 4.4-1build1 [6776 B] 166s Get:147 http://ftpmaster.internal/ubuntu noble/universe ppc64el diamond-aligner ppc64el 2.1.9-1 [1959 kB] 166s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el emboss-data all 6.6.0+dfsg-12ubuntu1 [61.0 MB] 172s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el emboss-test all 6.6.0+dfsg-12ubuntu1 [4798 kB] 172s Get:150 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 172s Get:151 http://ftpmaster.internal/ubuntu noble/main ppc64el libgd3 ppc64el 2.3.3-9ubuntu1 [155 kB] 172s Get:152 http://ftpmaster.internal/ubuntu noble/main ppc64el libgd-perl ppc64el 2.78-1build1 [128 kB] 172s Get:153 http://ftpmaster.internal/ubuntu noble/main ppc64el libdevel-symdump-perl all 2.18-5 [12.6 kB] 172s Get:154 http://ftpmaster.internal/ubuntu noble/main ppc64el liburi-perl all 5.27-1 [88.0 kB] 172s Get:155 http://ftpmaster.internal/ubuntu noble/main ppc64el libencode-locale-perl all 1.05-3 [11.6 kB] 172s Get:156 http://ftpmaster.internal/ubuntu noble/main ppc64el libtimedate-perl all 2.3300-2 [34.0 kB] 172s Get:157 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-date-perl all 6.06-1 [10.2 kB] 172s Get:158 http://ftpmaster.internal/ubuntu noble/main ppc64el libfile-listing-perl all 6.16-1 [11.3 kB] 172s Get:159 http://ftpmaster.internal/ubuntu noble/main ppc64el libhtml-tagset-perl all 3.20-6 [11.3 kB] 172s Get:160 http://ftpmaster.internal/ubuntu noble/main ppc64el libhtml-parser-perl ppc64el 3.81-1build1 [91.3 kB] 172s Get:161 http://ftpmaster.internal/ubuntu noble/main ppc64el libhtml-tree-perl all 5.07-3 [200 kB] 172s Get:162 http://ftpmaster.internal/ubuntu noble/main ppc64el libclone-perl ppc64el 0.46-1build1 [11.1 kB] 172s Get:163 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-html-perl all 1.004-3 [15.9 kB] 172s Get:164 http://ftpmaster.internal/ubuntu noble/main ppc64el liblwp-mediatypes-perl all 6.04-2 [20.1 kB] 172s Get:165 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-message-perl all 6.45-1ubuntu1 [78.2 kB] 172s Get:166 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-cookies-perl all 6.11-1 [18.2 kB] 172s Get:167 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-negotiate-perl all 6.01-2 [12.4 kB] 172s Get:168 http://ftpmaster.internal/ubuntu noble/main ppc64el perl-openssl-defaults ppc64el 7 [7534 B] 173s Get:169 http://ftpmaster.internal/ubuntu noble/main ppc64el libnet-ssleay-perl ppc64el 1.94-1 [326 kB] 173s Get:170 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-socket-ssl-perl all 2.085-1 [195 kB] 173s Get:171 http://ftpmaster.internal/ubuntu noble/main ppc64el libnet-http-perl all 6.23-1 [22.3 kB] 173s Get:172 http://ftpmaster.internal/ubuntu noble/main ppc64el liblwp-protocol-https-perl all 6.13-1 [9006 B] 173s Get:173 http://ftpmaster.internal/ubuntu noble/main ppc64el libtry-tiny-perl all 0.31-2 [20.8 kB] 173s Get:174 http://ftpmaster.internal/ubuntu noble/main ppc64el libwww-robotrules-perl all 6.02-1 [12.6 kB] 173s Get:175 http://ftpmaster.internal/ubuntu noble/main ppc64el libwww-perl all 6.76-1 [138 kB] 173s Get:176 http://ftpmaster.internal/ubuntu noble/main ppc64el libapache2-mod-perl2 ppc64el 2.0.13-1build1 [810 kB] 173s Get:177 http://ftpmaster.internal/ubuntu noble/main ppc64el libdbi-perl ppc64el 1.643-4build1 [729 kB] 173s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el libapache-dbi-perl all 1.12-3 [40.5 kB] 173s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-db-biofetch-perl all 1.7.3-4 [17.1 kB] 173s Get:180 http://ftpmaster.internal/ubuntu noble/main ppc64el libcgi-pm-perl all 4.62-1 [185 kB] 173s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-db-gff-perl all 1.7.4-1 [273 kB] 173s Get:182 http://ftpmaster.internal/ubuntu noble/main ppc64el libpq5 ppc64el 16.2-1 [170 kB] 173s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdbd-pg-perl ppc64el 3.18.0-1build1 [207 kB] 173s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdbd-sqlite3-perl ppc64el 1.74-1build1 [169 kB] 173s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-db-seqfeature-perl all 1.7.4-2 [169 kB] 173s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-graphics-perl all 2.40-6 [601 kB] 173s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-coordinate-perl all 1.7.1-4 [56.4 kB] 173s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el libcgi-session-perl all 4.48-4 [108 kB] 173s Get:189 http://ftpmaster.internal/ubuntu noble/main ppc64el libjson-perl all 4.10000-1 [81.9 kB] 173s Get:190 http://ftpmaster.internal/ubuntu noble/main ppc64el libexporter-tiny-perl all 1.006002-1 [36.8 kB] 173s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblist-moreutils-xs-perl ppc64el 0.430-3build3 [44.2 kB] 173s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblist-moreutils-perl all 0.430-2 [38.2 kB] 173s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el libstatistics-descriptive-perl all 3.0801-1 [58.7 kB] 173s Get:194 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-daemon-perl all 6.16-1 [22.4 kB] 173s Get:195 http://ftpmaster.internal/ubuntu noble/main ppc64el libterm-readkey-perl ppc64el 2.38-2build2 [24.7 kB] 173s Get:196 http://ftpmaster.internal/ubuntu noble/main ppc64el sqlite3 ppc64el 3.45.1-1 [166 kB] 173s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prototype all 1.7.3-1 [44.8 kB] 173s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-scriptaculous all 1.9.0-3 [92.6 kB] 173s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el libanyevent-perl ppc64el 7.170-2build4 [367 kB] 173s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el libanyevent-cachedns-perl all 0.08-3 [7216 B] 173s Get:201 http://ftpmaster.internal/ubuntu noble/main ppc64el libcommon-sense-perl ppc64el 3.75-3build1 [20.3 kB] 173s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el libanyevent-http-perl all 2.25-2 [30.3 kB] 173s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el libstring-approx-perl ppc64el 3.28-2build2 [37.2 kB] 173s Get:204 http://ftpmaster.internal/ubuntu noble/main ppc64el libxml-namespacesupport-perl all 1.12-2 [13.5 kB] 173s Get:205 http://ftpmaster.internal/ubuntu noble/main ppc64el libxml-sax-base-perl all 1.09-3 [18.9 kB] 173s Get:206 http://ftpmaster.internal/ubuntu noble/main ppc64el libxml-sax-perl all 1.02+dfsg-3 [57.0 kB] 174s Get:207 http://ftpmaster.internal/ubuntu noble/main ppc64el libxml-libxml-perl ppc64el 2.0207+dfsg+really+2.0134-1build2 [310 kB] 174s Get:208 http://ftpmaster.internal/ubuntu noble/main ppc64el libxml-simple-perl all 2.25-2 [64.1 kB] 174s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el libvm-ec2-perl all 1.28-4 [766 kB] 174s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el gbrowse all 2.56+dfsg-12build1 [2181 kB] 174s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el gff2aplot ppc64el 2.0-15 [258 kB] 174s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el gff2ps all 0.98l-6 [63.1 kB] 174s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el libgclib3 ppc64el 0.12.7+ds-5 [193 kB] 174s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el gffread ppc64el 0.12.7-4 [68.2 kB] 174s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el htslib-test all 1.18+ds-1 [1120 kB] 174s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblua5.1-0 ppc64el 5.1.5-9 [161 kB] 174s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmbedcrypto7 ppc64el 2.28.7-1ubuntu1 [262 kB] 174s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmbedx509-1 ppc64el 2.28.7-1ubuntu1 [51.4 kB] 174s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmbedtls14 ppc64el 2.28.7-1ubuntu1 [89.7 kB] 174s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtre5 ppc64el 0.8.0-7 [56.1 kB] 174s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el ncbi-data all 6.1.20170106+dfsg1-10 [4395 kB] 174s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el ncbi-blast+ ppc64el 2.12.0+ds-4 [13.4 MB] 175s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el bowtie2 ppc64el 2.5.2-1 [1367 kB] 175s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el samtools ppc64el 1.19.2-1 [669 kB] 175s Get:225 http://ftpmaster.internal/ubuntu noble/universe ppc64el optimir all 1.2-1 [1128 kB] 175s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el proteinortho ppc64el 6.3.1+dfsg-1 [374 kB] 175s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-argcomplete all 3.1.4-1 [33.5 kB] 175s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-argh all 0.31.2-1 [26.9 kB] 175s Get:229 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-simplejson ppc64el 3.19.2-1build1 [70.4 kB] 175s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-gffutils all 0.12-2 [1078 kB] 175s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el python3-pybedtools ppc64el 0.9.1-1 [12.4 MB] 175s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el genometools-common all 1.6.5+ds-2 [194 kB] 175s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el seqan-apps ppc64el 2.4.0+dfsg-16 [12.7 MB] 176s Preconfiguring packages ... 176s Fetched 346 MB in 25s (13.9 MB/s) 176s Selecting previously unselected package libapr1:ppc64el. 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69714 files and directories currently installed.) 176s Preparing to unpack .../000-libapr1_1.7.2-3_ppc64el.deb ... 176s Unpacking libapr1:ppc64el (1.7.2-3) ... 176s Selecting previously unselected package libaprutil1:ppc64el. 176s Preparing to unpack .../001-libaprutil1_1.6.3-1ubuntu1_ppc64el.deb ... 176s Unpacking libaprutil1:ppc64el (1.6.3-1ubuntu1) ... 176s Selecting previously unselected package libaprutil1-dbd-sqlite3:ppc64el. 176s Preparing to unpack .../002-libaprutil1-dbd-sqlite3_1.6.3-1ubuntu1_ppc64el.deb ... 176s Unpacking libaprutil1-dbd-sqlite3:ppc64el (1.6.3-1ubuntu1) ... 176s Selecting previously unselected package libaprutil1-ldap:ppc64el. 176s Preparing to unpack .../003-libaprutil1-ldap_1.6.3-1ubuntu1_ppc64el.deb ... 176s Unpacking libaprutil1-ldap:ppc64el (1.6.3-1ubuntu1) ... 176s Selecting previously unselected package liblua5.4-0:ppc64el. 176s Preparing to unpack .../004-liblua5.4-0_5.4.6-3_ppc64el.deb ... 176s Unpacking liblua5.4-0:ppc64el (5.4.6-3) ... 176s Selecting previously unselected package apache2-bin. 176s Preparing to unpack .../005-apache2-bin_2.4.58-1ubuntu2_ppc64el.deb ... 176s Unpacking apache2-bin (2.4.58-1ubuntu2) ... 176s Selecting previously unselected package apache2-data. 176s Preparing to unpack .../006-apache2-data_2.4.58-1ubuntu2_all.deb ... 176s Unpacking apache2-data (2.4.58-1ubuntu2) ... 176s Selecting previously unselected package apache2-utils. 176s Preparing to unpack .../007-apache2-utils_2.4.58-1ubuntu2_ppc64el.deb ... 176s Unpacking apache2-utils (2.4.58-1ubuntu2) ... 176s Selecting previously unselected package apache2. 176s Preparing to unpack .../008-apache2_2.4.58-1ubuntu2_ppc64el.deb ... 176s Unpacking apache2 (2.4.58-1ubuntu2) ... 176s Selecting previously unselected package sgml-base. 176s Preparing to unpack .../009-sgml-base_1.31_all.deb ... 176s Unpacking sgml-base (1.31) ... 176s Selecting previously unselected package pigz. 176s Preparing to unpack .../010-pigz_2.8-1_ppc64el.deb ... 176s Unpacking pigz (2.8-1) ... 176s Selecting previously unselected package augustus-doc. 176s Preparing to unpack .../011-augustus-doc_3.5.0+dfsg-4build1_all.deb ... 176s Unpacking augustus-doc (3.5.0+dfsg-4build1) ... 177s Selecting previously unselected package bedtools-test. 177s Preparing to unpack .../012-bedtools-test_2.31.1+dfsg-2_all.deb ... 177s Unpacking bedtools-test (2.31.1+dfsg-2) ... 178s Selecting previously unselected package libio-string-perl. 178s Preparing to unpack .../013-libio-string-perl_1.08-4_all.deb ... 178s Unpacking libio-string-perl (1.08-4) ... 178s Selecting previously unselected package libdata-stag-perl. 178s Preparing to unpack .../014-libdata-stag-perl_0.14-3_all.deb ... 178s Unpacking libdata-stag-perl (0.14-3) ... 178s Selecting previously unselected package libbio-perl-perl. 178s Preparing to unpack .../015-libbio-perl-perl_1.7.8-1_all.deb ... 178s Unpacking libbio-perl-perl (1.7.8-1) ... 178s Selecting previously unselected package libclass-data-inheritable-perl. 178s Preparing to unpack .../016-libclass-data-inheritable-perl_0.08-3_all.deb ... 178s Unpacking libclass-data-inheritable-perl (0.08-3) ... 178s Selecting previously unselected package libdevel-stacktrace-perl. 178s Preparing to unpack .../017-libdevel-stacktrace-perl_2.0500-1_all.deb ... 178s Unpacking libdevel-stacktrace-perl (2.0500-1) ... 178s Selecting previously unselected package libexception-class-perl. 178s Preparing to unpack .../018-libexception-class-perl_1.45-1_all.deb ... 178s Unpacking libexception-class-perl (1.45-1) ... 178s Selecting previously unselected package libtest-deep-perl. 178s Preparing to unpack .../019-libtest-deep-perl_1.204-1_all.deb ... 178s Unpacking libtest-deep-perl (1.204-1) ... 178s Selecting previously unselected package libcapture-tiny-perl. 178s Preparing to unpack .../020-libcapture-tiny-perl_0.48-2_all.deb ... 178s Unpacking libcapture-tiny-perl (0.48-2) ... 178s Selecting previously unselected package libalgorithm-diff-perl. 178s Preparing to unpack .../021-libalgorithm-diff-perl_1.201-1_all.deb ... 178s Unpacking libalgorithm-diff-perl (1.201-1) ... 178s Selecting previously unselected package libtext-diff-perl. 178s Preparing to unpack .../022-libtext-diff-perl_1.45-2_all.deb ... 178s Unpacking libtext-diff-perl (1.45-2) ... 178s Selecting previously unselected package libtest-differences-perl. 178s Preparing to unpack .../023-libtest-differences-perl_0.71-1_all.deb ... 178s Unpacking libtest-differences-perl (0.71-1) ... 178s Selecting previously unselected package libsub-uplevel-perl. 178s Preparing to unpack .../024-libsub-uplevel-perl_0.2800-3_all.deb ... 178s Unpacking libsub-uplevel-perl (0.2800-3) ... 178s Selecting previously unselected package libtest-exception-perl. 178s Preparing to unpack .../025-libtest-exception-perl_0.43-3_all.deb ... 178s Unpacking libtest-exception-perl (0.43-3) ... 178s Selecting previously unselected package libtest-warn-perl. 178s Preparing to unpack .../026-libtest-warn-perl_0.37-2_all.deb ... 178s Unpacking libtest-warn-perl (0.37-2) ... 178s Selecting previously unselected package libtest-most-perl. 178s Preparing to unpack .../027-libtest-most-perl_0.38-1_all.deb ... 178s Unpacking libtest-most-perl (0.38-1) ... 178s Selecting previously unselected package bioperl. 178s Preparing to unpack .../028-bioperl_1.7.8-1_all.deb ... 178s Unpacking bioperl (1.7.8-1) ... 178s Selecting previously unselected package libtcl8.6:ppc64el. 178s Preparing to unpack .../029-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 178s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 178s Selecting previously unselected package fonts-dejavu-mono. 178s Preparing to unpack .../030-fonts-dejavu-mono_2.37-8_all.deb ... 178s Unpacking fonts-dejavu-mono (2.37-8) ... 178s Selecting previously unselected package fonts-dejavu-core. 178s Preparing to unpack .../031-fonts-dejavu-core_2.37-8_all.deb ... 178s Unpacking fonts-dejavu-core (2.37-8) ... 178s Selecting previously unselected package libfontenc1:ppc64el. 178s Preparing to unpack .../032-libfontenc1_1%3a1.1.8-1_ppc64el.deb ... 178s Unpacking libfontenc1:ppc64el (1:1.1.8-1) ... 178s Selecting previously unselected package x11-common. 178s Preparing to unpack .../033-x11-common_1%3a7.7+23ubuntu2_all.deb ... 178s Unpacking x11-common (1:7.7+23ubuntu2) ... 178s Selecting previously unselected package xfonts-encodings. 178s Preparing to unpack .../034-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 178s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 178s Selecting previously unselected package xfonts-utils. 178s Preparing to unpack .../035-xfonts-utils_1%3a7.7+6build2_ppc64el.deb ... 178s Unpacking xfonts-utils (1:7.7+6build2) ... 178s Selecting previously unselected package fonts-urw-base35. 178s Preparing to unpack .../036-fonts-urw-base35_20200910-8_all.deb ... 178s Unpacking fonts-urw-base35 (20200910-8) ... 178s Selecting previously unselected package fontconfig-config. 178s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 179s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 179s Selecting previously unselected package libfontconfig1:ppc64el. 179s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 179s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 179s Selecting previously unselected package libxrender1:ppc64el. 179s Preparing to unpack .../039-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 179s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 179s Selecting previously unselected package libxft2:ppc64el. 179s Preparing to unpack .../040-libxft2_2.3.6-1_ppc64el.deb ... 179s Unpacking libxft2:ppc64el (2.3.6-1) ... 179s Selecting previously unselected package libxss1:ppc64el. 179s Preparing to unpack .../041-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 179s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 179s Selecting previously unselected package libtk8.6:ppc64el. 179s Preparing to unpack .../042-libtk8.6_8.6.14-1_ppc64el.deb ... 179s Unpacking libtk8.6:ppc64el (8.6.14-1) ... 179s Selecting previously unselected package tk8.6-blt2.5. 179s Preparing to unpack .../043-tk8.6-blt2.5_2.5.3+dfsg-7_ppc64el.deb ... 179s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 179s Selecting previously unselected package blt. 179s Preparing to unpack .../044-blt_2.5.3+dfsg-7_ppc64el.deb ... 179s Unpacking blt (2.5.3+dfsg-7) ... 179s Selecting previously unselected package libblas3:ppc64el. 179s Preparing to unpack .../045-libblas3_3.12.0-3_ppc64el.deb ... 179s Unpacking libblas3:ppc64el (3.12.0-3) ... 179s Selecting previously unselected package libgfortran5:ppc64el. 179s Preparing to unpack .../046-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 179s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 179s Selecting previously unselected package liblapack3:ppc64el. 179s Preparing to unpack .../047-liblapack3_3.12.0-3_ppc64el.deb ... 179s Unpacking liblapack3:ppc64el (3.12.0-3) ... 179s Selecting previously unselected package python3-numpy. 179s Preparing to unpack .../048-python3-numpy_1%3a1.24.2-2_ppc64el.deb ... 179s Unpacking python3-numpy (1:1.24.2-2) ... 179s Selecting previously unselected package python3-tk:ppc64el. 179s Preparing to unpack .../049-python3-tk_3.11.5-1_ppc64el.deb ... 179s Unpacking python3-tk:ppc64el (3.11.5-1) ... 179s Selecting previously unselected package python3-pil.imagetk:ppc64el. 179s Preparing to unpack .../050-python3-pil.imagetk_10.2.0-1_ppc64el.deb ... 179s Unpacking python3-pil.imagetk:ppc64el (10.2.0-1) ... 179s Selecting previously unselected package libgomp1:ppc64el. 179s Preparing to unpack .../051-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 179s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 179s Selecting previously unselected package libimagequant0:ppc64el. 179s Preparing to unpack .../052-libimagequant0_2.18.0-1_ppc64el.deb ... 179s Unpacking libimagequant0:ppc64el (2.18.0-1) ... 179s Selecting previously unselected package libjpeg-turbo8:ppc64el. 179s Preparing to unpack .../053-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 179s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 179s Selecting previously unselected package libjpeg8:ppc64el. 179s Preparing to unpack .../054-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 179s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 179s Selecting previously unselected package liblcms2-2:ppc64el. 179s Preparing to unpack .../055-liblcms2-2_2.14-2_ppc64el.deb ... 179s Unpacking liblcms2-2:ppc64el (2.14-2) ... 179s Selecting previously unselected package libopenjp2-7:ppc64el. 179s Preparing to unpack .../056-libopenjp2-7_2.5.0-2_ppc64el.deb ... 179s Unpacking libopenjp2-7:ppc64el (2.5.0-2) ... 179s Selecting previously unselected package libgraphite2-3:ppc64el. 179s Preparing to unpack .../057-libgraphite2-3_1.3.14-2_ppc64el.deb ... 179s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 179s Selecting previously unselected package libharfbuzz0b:ppc64el. 179s Preparing to unpack .../058-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 179s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 179s Selecting previously unselected package libraqm0:ppc64el. 179s Preparing to unpack .../059-libraqm0_0.10.1-1_ppc64el.deb ... 179s Unpacking libraqm0:ppc64el (0.10.1-1) ... 179s Selecting previously unselected package libdeflate0:ppc64el. 179s Preparing to unpack .../060-libdeflate0_1.19-1_ppc64el.deb ... 179s Unpacking libdeflate0:ppc64el (1.19-1) ... 179s Selecting previously unselected package libjbig0:ppc64el. 179s Preparing to unpack .../061-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 179s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 179s Selecting previously unselected package liblerc4:ppc64el. 179s Preparing to unpack .../062-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 179s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 179s Selecting previously unselected package libsharpyuv0:ppc64el. 179s Preparing to unpack .../063-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 179s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 179s Selecting previously unselected package libwebp7:ppc64el. 179s Preparing to unpack .../064-libwebp7_1.3.2-0.4_ppc64el.deb ... 179s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 179s Selecting previously unselected package libtiff6:ppc64el. 179s Preparing to unpack .../065-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 179s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 179s Selecting previously unselected package libwebpdemux2:ppc64el. 179s Preparing to unpack .../066-libwebpdemux2_1.3.2-0.4_ppc64el.deb ... 179s Unpacking libwebpdemux2:ppc64el (1.3.2-0.4) ... 179s Selecting previously unselected package libwebpmux3:ppc64el. 179s Preparing to unpack .../067-libwebpmux3_1.3.2-0.4_ppc64el.deb ... 179s Unpacking libwebpmux3:ppc64el (1.3.2-0.4) ... 179s Selecting previously unselected package python3-pil:ppc64el. 179s Preparing to unpack .../068-python3-pil_10.2.0-1_ppc64el.deb ... 179s Unpacking python3-pil:ppc64el (10.2.0-1) ... 180s Selecting previously unselected package libpixman-1-0:ppc64el. 180s Preparing to unpack .../069-libpixman-1-0_0.42.2-1_ppc64el.deb ... 180s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 180s Selecting previously unselected package libxcb-render0:ppc64el. 180s Preparing to unpack .../070-libxcb-render0_1.15-1_ppc64el.deb ... 180s Unpacking libxcb-render0:ppc64el (1.15-1) ... 180s Selecting previously unselected package libxcb-shm0:ppc64el. 180s Preparing to unpack .../071-libxcb-shm0_1.15-1_ppc64el.deb ... 180s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 180s Selecting previously unselected package libcairo2:ppc64el. 180s Preparing to unpack .../072-libcairo2_1.18.0-1_ppc64el.deb ... 180s Unpacking libcairo2:ppc64el (1.18.0-1) ... 180s Selecting previously unselected package python3-cairo. 180s Preparing to unpack .../073-python3-cairo_1.25.1-2_ppc64el.deb ... 180s Unpacking python3-cairo (1.25.1-2) ... 180s Selecting previously unselected package python3-freetype. 180s Preparing to unpack .../074-python3-freetype_2.4.0-1_all.deb ... 180s Unpacking python3-freetype (2.4.0-1) ... 180s Selecting previously unselected package python3-rlpycairo. 180s Preparing to unpack .../075-python3-rlpycairo_0.3.0-3_all.deb ... 180s Unpacking python3-rlpycairo (0.3.0-3) ... 180s Selecting previously unselected package fonts-dejavu-extra. 180s Preparing to unpack .../076-fonts-dejavu-extra_2.37-8_all.deb ... 180s Unpacking fonts-dejavu-extra (2.37-8) ... 180s Selecting previously unselected package python3-reportlab. 180s Preparing to unpack .../077-python3-reportlab_4.1.0-1_all.deb ... 180s Unpacking python3-reportlab (4.1.0-1) ... 180s Selecting previously unselected package xml-core. 180s Preparing to unpack .../078-xml-core_0.19_all.deb ... 180s Unpacking xml-core (0.19) ... 180s Selecting previously unselected package w3c-sgml-lib. 180s Preparing to unpack .../079-w3c-sgml-lib_1.3-3_all.deb ... 180s Unpacking w3c-sgml-lib (1.3-3) ... 180s Selecting previously unselected package python3-biopython. 180s Preparing to unpack .../080-python3-biopython_1.81+dfsg-3_ppc64el.deb ... 180s Unpacking python3-biopython (1.81+dfsg-3) ... 180s Selecting previously unselected package libjs-jquery. 180s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 180s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 180s Selecting previously unselected package libjs-jquery-ui. 180s Preparing to unpack .../082-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 180s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 180s Selecting previously unselected package fonts-lyx. 180s Preparing to unpack .../083-fonts-lyx_2.4.0~RC3-1_all.deb ... 180s Unpacking fonts-lyx (2.4.0~RC3-1) ... 180s Selecting previously unselected package python-matplotlib-data. 180s Preparing to unpack .../084-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 180s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 180s Selecting previously unselected package python3-dateutil. 180s Preparing to unpack .../085-python3-dateutil_2.8.2-3_all.deb ... 180s Unpacking python3-dateutil (2.8.2-3) ... 180s Selecting previously unselected package python3-contourpy. 180s Preparing to unpack .../086-python3-contourpy_1.0.7-1build2_ppc64el.deb ... 180s Unpacking python3-contourpy (1.0.7-1build2) ... 180s Selecting previously unselected package python3-cycler. 180s Preparing to unpack .../087-python3-cycler_0.11.0-2_all.deb ... 180s Unpacking python3-cycler (0.11.0-2) ... 180s Selecting previously unselected package python3-brotli. 180s Preparing to unpack .../088-python3-brotli_1.1.0-2_ppc64el.deb ... 180s Unpacking python3-brotli (1.1.0-2) ... 180s Selecting previously unselected package python3-decorator. 180s Preparing to unpack .../089-python3-decorator_5.1.1-5_all.deb ... 180s Unpacking python3-decorator (5.1.1-5) ... 180s Selecting previously unselected package liblbfgsb0:ppc64el. 180s Preparing to unpack .../090-liblbfgsb0_3.0+dfsg.4-1_ppc64el.deb ... 180s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 180s Selecting previously unselected package python3-scipy. 180s Preparing to unpack .../091-python3-scipy_1.11.4-6_ppc64el.deb ... 180s Unpacking python3-scipy (1.11.4-6) ... 181s Selecting previously unselected package python3-ufolib2. 181s Preparing to unpack .../092-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 181s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 181s Selecting previously unselected package python3-mpmath. 181s Preparing to unpack .../093-python3-mpmath_1.2.1-3_all.deb ... 181s Unpacking python3-mpmath (1.2.1-3) ... 181s Selecting previously unselected package python3-sympy. 181s Preparing to unpack .../094-python3-sympy_1.12-7_all.deb ... 181s Unpacking python3-sympy (1.12-7) ... 182s Selecting previously unselected package python3-appdirs. 182s Preparing to unpack .../095-python3-appdirs_1.4.4-4_all.deb ... 182s Unpacking python3-appdirs (1.4.4-4) ... 182s Selecting previously unselected package python3-fs. 182s Preparing to unpack .../096-python3-fs_2.4.16-3_all.deb ... 182s Unpacking python3-fs (2.4.16-3) ... 182s Selecting previously unselected package libxslt1.1:ppc64el. 182s Preparing to unpack .../097-libxslt1.1_1.1.39-0exp1_ppc64el.deb ... 182s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1) ... 182s Selecting previously unselected package python3-lxml:ppc64el. 182s Preparing to unpack .../098-python3-lxml_5.1.0-1_ppc64el.deb ... 182s Unpacking python3-lxml:ppc64el (5.1.0-1) ... 182s Selecting previously unselected package python3-lz4. 182s Preparing to unpack .../099-python3-lz4_4.0.2+dfsg-1build2_ppc64el.deb ... 182s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 182s Selecting previously unselected package python3-unicodedata2. 182s Preparing to unpack .../100-python3-unicodedata2_15.1.0+ds-1_ppc64el.deb ... 182s Unpacking python3-unicodedata2 (15.1.0+ds-1) ... 182s Selecting previously unselected package unicode-data. 182s Preparing to unpack .../101-unicode-data_15.1.0-1_all.deb ... 182s Unpacking unicode-data (15.1.0-1) ... 182s Selecting previously unselected package python3-fonttools. 182s Preparing to unpack .../102-python3-fonttools_4.46.0-1_ppc64el.deb ... 182s Unpacking python3-fonttools (4.46.0-1) ... 182s Selecting previously unselected package python3-kiwisolver. 182s Preparing to unpack .../103-python3-kiwisolver_1.4.4-2_ppc64el.deb ... 182s Unpacking python3-kiwisolver (1.4.4-2) ... 182s Selecting previously unselected package python3-packaging. 182s Preparing to unpack .../104-python3-packaging_23.2-1_all.deb ... 182s Unpacking python3-packaging (23.2-1) ... 182s Selecting previously unselected package libqhull-r8.0:ppc64el. 182s Preparing to unpack .../105-libqhull-r8.0_2020.2-6_ppc64el.deb ... 182s Unpacking libqhull-r8.0:ppc64el (2020.2-6) ... 182s Selecting previously unselected package python3-matplotlib. 182s Preparing to unpack .../106-python3-matplotlib_3.6.3-1ubuntu3_ppc64el.deb ... 182s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ... 183s Selecting previously unselected package python3-pandas-lib:ppc64el. 183s Preparing to unpack .../107-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_ppc64el.deb ... 183s Unpacking python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ... 183s Selecting previously unselected package python3-pandas. 183s Preparing to unpack .../108-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ... 183s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ... 183s Selecting previously unselected package python3-joblib. 183s Preparing to unpack .../109-python3-joblib_1.3.2-1_all.deb ... 183s Unpacking python3-joblib (1.3.2-1) ... 183s Selecting previously unselected package python3-networkx. 183s Preparing to unpack .../110-python3-networkx_2.8.8-1ubuntu1_all.deb ... 183s Unpacking python3-networkx (2.8.8-1ubuntu1) ... 183s Selecting previously unselected package python3-pomegranate. 183s Preparing to unpack .../111-python3-pomegranate_0.14.8-4_ppc64el.deb ... 183s Unpacking python3-pomegranate (0.14.8-4) ... 184s Selecting previously unselected package python3-more-itertools. 184s Preparing to unpack .../112-python3-more-itertools_10.2.0-1_all.deb ... 184s Unpacking python3-more-itertools (10.2.0-1) ... 184s Selecting previously unselected package python3-zipp. 184s Preparing to unpack .../113-python3-zipp_1.0.0-6_all.deb ... 184s Unpacking python3-zipp (1.0.0-6) ... 184s Selecting previously unselected package python3-importlib-metadata. 184s Preparing to unpack .../114-python3-importlib-metadata_4.12.0-1_all.deb ... 184s Unpacking python3-importlib-metadata (4.12.0-1) ... 184s Selecting previously unselected package python3-pyfaidx. 184s Preparing to unpack .../115-python3-pyfaidx_0.8.1.1-1_all.deb ... 184s Unpacking python3-pyfaidx (0.8.1.1-1) ... 184s Selecting previously unselected package libhtscodecs2:ppc64el. 184s Preparing to unpack .../116-libhtscodecs2_1.6.0-1_ppc64el.deb ... 184s Unpacking libhtscodecs2:ppc64el (1.6.0-1) ... 184s Selecting previously unselected package libhts3:ppc64el. 184s Preparing to unpack .../117-libhts3_1.18+ds-1_ppc64el.deb ... 184s Unpacking libhts3:ppc64el (1.18+ds-1) ... 184s Selecting previously unselected package python3-pysam. 184s Preparing to unpack .../118-python3-pysam_0.22.0+ds-1_ppc64el.deb ... 184s Unpacking python3-pysam (0.22.0+ds-1) ... 184s Selecting previously unselected package python3-threadpoolctl. 184s Preparing to unpack .../119-python3-threadpoolctl_3.1.0-1_all.deb ... 184s Unpacking python3-threadpoolctl (3.1.0-1) ... 184s Selecting previously unselected package python3-sklearn-lib:ppc64el. 184s Preparing to unpack .../120-python3-sklearn-lib_1.4.1.post1+dfsg-1_ppc64el.deb ... 184s Unpacking python3-sklearn-lib:ppc64el (1.4.1.post1+dfsg-1) ... 185s Selecting previously unselected package python3-sklearn. 185s Preparing to unpack .../121-python3-sklearn_1.4.1.post1+dfsg-1_all.deb ... 185s Unpacking python3-sklearn (1.4.1.post1+dfsg-1) ... 185s Selecting previously unselected package zip. 185s Preparing to unpack .../122-zip_3.0-13_ppc64el.deb ... 185s Unpacking zip (3.0-13) ... 185s Selecting previously unselected package unzip. 185s Preparing to unpack .../123-unzip_6.0-28ubuntu3_ppc64el.deb ... 185s Unpacking unzip (6.0-28ubuntu3) ... 185s Selecting previously unselected package libpaper1:ppc64el. 185s Preparing to unpack .../124-libpaper1_1.1.29_ppc64el.deb ... 185s Unpacking libpaper1:ppc64el (1.1.29) ... 185s Selecting previously unselected package libpaper-utils. 185s Preparing to unpack .../125-libpaper-utils_1.1.29_ppc64el.deb ... 185s Unpacking libpaper-utils (1.1.29) ... 185s Selecting previously unselected package xdg-utils. 185s Preparing to unpack .../126-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 185s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 185s Selecting previously unselected package fontconfig. 185s Preparing to unpack .../127-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 185s Unpacking fontconfig (2.15.0-1ubuntu1) ... 185s Selecting previously unselected package libthai-data. 185s Preparing to unpack .../128-libthai-data_0.1.29-2_all.deb ... 185s Unpacking libthai-data (0.1.29-2) ... 185s Selecting previously unselected package libdatrie1:ppc64el. 185s Preparing to unpack .../129-libdatrie1_0.2.13-3_ppc64el.deb ... 185s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 185s Selecting previously unselected package libthai0:ppc64el. 185s Preparing to unpack .../130-libthai0_0.1.29-2_ppc64el.deb ... 185s Unpacking libthai0:ppc64el (0.1.29-2) ... 185s Selecting previously unselected package libpango-1.0-0:ppc64el. 185s Preparing to unpack .../131-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 185s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 185s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 185s Preparing to unpack .../132-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 185s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 185s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 185s Preparing to unpack .../133-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 185s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 185s Selecting previously unselected package libice6:ppc64el. 185s Preparing to unpack .../134-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 185s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 185s Selecting previously unselected package libsm6:ppc64el. 185s Preparing to unpack .../135-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 185s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 185s Selecting previously unselected package libxt6:ppc64el. 185s Preparing to unpack .../136-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 185s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 185s Selecting previously unselected package r-base-core. 185s Preparing to unpack .../137-r-base-core_4.3.2-1build1_ppc64el.deb ... 185s Unpacking r-base-core (4.3.2-1build1) ... 185s Selecting previously unselected package r-bioc-biocgenerics. 185s Preparing to unpack .../138-r-bioc-biocgenerics_0.48.1-2_all.deb ... 185s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 185s Selecting previously unselected package r-bioc-dnacopy. 185s Preparing to unpack .../139-r-bioc-dnacopy_1.76.0-1_ppc64el.deb ... 185s Unpacking r-bioc-dnacopy (1.76.0-1) ... 186s Selecting previously unselected package cnvkit. 186s Preparing to unpack .../140-cnvkit_0.9.10-1_ppc64el.deb ... 186s Unpacking cnvkit (0.9.10-1) ... 186s Selecting previously unselected package python3-xopen. 186s Preparing to unpack .../141-python3-xopen_1.7.0-2_all.deb ... 186s Unpacking python3-xopen (1.7.0-2) ... 186s Selecting previously unselected package python3-dnaio. 186s Preparing to unpack .../142-python3-dnaio_1.0.1-1build1_ppc64el.deb ... 186s Unpacking python3-dnaio (1.0.1-1build1) ... 186s Selecting previously unselected package python3-cutadapt. 186s Preparing to unpack .../143-python3-cutadapt_4.4-1build1_ppc64el.deb ... 186s Unpacking python3-cutadapt (4.4-1build1) ... 186s Selecting previously unselected package cutadapt. 186s Preparing to unpack .../144-cutadapt_4.4-1build1_all.deb ... 186s Unpacking cutadapt (4.4-1build1) ... 186s Selecting previously unselected package diamond-aligner. 186s Preparing to unpack .../145-diamond-aligner_2.1.9-1_ppc64el.deb ... 186s Unpacking diamond-aligner (2.1.9-1) ... 186s Selecting previously unselected package emboss-data. 186s Preparing to unpack .../146-emboss-data_6.6.0+dfsg-12ubuntu1_all.deb ... 186s Unpacking emboss-data (6.6.0+dfsg-12ubuntu1) ... 194s Selecting previously unselected package emboss-test. 194s Preparing to unpack .../147-emboss-test_6.6.0+dfsg-12ubuntu1_all.deb ... 194s Unpacking emboss-test (6.6.0+dfsg-12ubuntu1) ... 195s Selecting previously unselected package libxpm4:ppc64el. 195s Preparing to unpack .../148-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 195s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 195s Selecting previously unselected package libgd3:ppc64el. 195s Preparing to unpack .../149-libgd3_2.3.3-9ubuntu1_ppc64el.deb ... 195s Unpacking libgd3:ppc64el (2.3.3-9ubuntu1) ... 195s Selecting previously unselected package libgd-perl. 195s Preparing to unpack .../150-libgd-perl_2.78-1build1_ppc64el.deb ... 195s Unpacking libgd-perl (2.78-1build1) ... 195s Selecting previously unselected package libdevel-symdump-perl. 195s Preparing to unpack .../151-libdevel-symdump-perl_2.18-5_all.deb ... 195s Unpacking libdevel-symdump-perl (2.18-5) ... 195s Selecting previously unselected package liburi-perl. 195s Preparing to unpack .../152-liburi-perl_5.27-1_all.deb ... 195s Unpacking liburi-perl (5.27-1) ... 195s Selecting previously unselected package libencode-locale-perl. 195s Preparing to unpack .../153-libencode-locale-perl_1.05-3_all.deb ... 195s Unpacking libencode-locale-perl (1.05-3) ... 195s Selecting previously unselected package libtimedate-perl. 195s Preparing to unpack .../154-libtimedate-perl_2.3300-2_all.deb ... 195s Unpacking libtimedate-perl (2.3300-2) ... 195s Selecting previously unselected package libhttp-date-perl. 195s Preparing to unpack .../155-libhttp-date-perl_6.06-1_all.deb ... 195s Unpacking libhttp-date-perl (6.06-1) ... 195s Selecting previously unselected package libfile-listing-perl. 195s Preparing to unpack .../156-libfile-listing-perl_6.16-1_all.deb ... 195s Unpacking libfile-listing-perl (6.16-1) ... 195s Selecting previously unselected package libhtml-tagset-perl. 195s Preparing to unpack .../157-libhtml-tagset-perl_3.20-6_all.deb ... 195s Unpacking libhtml-tagset-perl (3.20-6) ... 195s Selecting previously unselected package libhtml-parser-perl:ppc64el. 195s Preparing to unpack .../158-libhtml-parser-perl_3.81-1build1_ppc64el.deb ... 195s Unpacking libhtml-parser-perl:ppc64el (3.81-1build1) ... 195s Selecting previously unselected package libhtml-tree-perl. 195s Preparing to unpack .../159-libhtml-tree-perl_5.07-3_all.deb ... 195s Unpacking libhtml-tree-perl (5.07-3) ... 195s Selecting previously unselected package libclone-perl:ppc64el. 195s Preparing to unpack .../160-libclone-perl_0.46-1build1_ppc64el.deb ... 195s Unpacking libclone-perl:ppc64el (0.46-1build1) ... 195s Selecting previously unselected package libio-html-perl. 195s Preparing to unpack .../161-libio-html-perl_1.004-3_all.deb ... 195s Unpacking libio-html-perl (1.004-3) ... 195s Selecting previously unselected package liblwp-mediatypes-perl. 195s Preparing to unpack .../162-liblwp-mediatypes-perl_6.04-2_all.deb ... 195s Unpacking liblwp-mediatypes-perl (6.04-2) ... 195s Selecting previously unselected package libhttp-message-perl. 195s Preparing to unpack .../163-libhttp-message-perl_6.45-1ubuntu1_all.deb ... 195s Unpacking libhttp-message-perl (6.45-1ubuntu1) ... 195s Selecting previously unselected package libhttp-cookies-perl. 195s Preparing to unpack .../164-libhttp-cookies-perl_6.11-1_all.deb ... 195s Unpacking libhttp-cookies-perl (6.11-1) ... 195s Selecting previously unselected package libhttp-negotiate-perl. 195s Preparing to unpack .../165-libhttp-negotiate-perl_6.01-2_all.deb ... 195s Unpacking libhttp-negotiate-perl (6.01-2) ... 195s Selecting previously unselected package perl-openssl-defaults:ppc64el. 195s Preparing to unpack .../166-perl-openssl-defaults_7_ppc64el.deb ... 195s Unpacking perl-openssl-defaults:ppc64el (7) ... 195s Selecting previously unselected package libnet-ssleay-perl:ppc64el. 195s Preparing to unpack .../167-libnet-ssleay-perl_1.94-1_ppc64el.deb ... 195s Unpacking libnet-ssleay-perl:ppc64el (1.94-1) ... 195s Selecting previously unselected package libio-socket-ssl-perl. 195s Preparing to unpack .../168-libio-socket-ssl-perl_2.085-1_all.deb ... 195s Unpacking libio-socket-ssl-perl (2.085-1) ... 195s Selecting previously unselected package libnet-http-perl. 195s Preparing to unpack .../169-libnet-http-perl_6.23-1_all.deb ... 195s Unpacking libnet-http-perl (6.23-1) ... 195s Selecting previously unselected package liblwp-protocol-https-perl. 195s Preparing to unpack .../170-liblwp-protocol-https-perl_6.13-1_all.deb ... 195s Unpacking liblwp-protocol-https-perl (6.13-1) ... 195s Selecting previously unselected package libtry-tiny-perl. 195s Preparing to unpack .../171-libtry-tiny-perl_0.31-2_all.deb ... 195s Unpacking libtry-tiny-perl (0.31-2) ... 195s Selecting previously unselected package libwww-robotrules-perl. 195s Preparing to unpack .../172-libwww-robotrules-perl_6.02-1_all.deb ... 195s Unpacking libwww-robotrules-perl (6.02-1) ... 195s Selecting previously unselected package libwww-perl. 195s Preparing to unpack .../173-libwww-perl_6.76-1_all.deb ... 195s Unpacking libwww-perl (6.76-1) ... 195s Selecting previously unselected package libapache2-mod-perl2. 195s Preparing to unpack .../174-libapache2-mod-perl2_2.0.13-1build1_ppc64el.deb ... 195s Unpacking libapache2-mod-perl2 (2.0.13-1build1) ... 195s Selecting previously unselected package libdbi-perl:ppc64el. 195s Preparing to unpack .../175-libdbi-perl_1.643-4build1_ppc64el.deb ... 195s Unpacking libdbi-perl:ppc64el (1.643-4build1) ... 195s Selecting previously unselected package libapache-dbi-perl. 195s Preparing to unpack .../176-libapache-dbi-perl_1.12-3_all.deb ... 195s Unpacking libapache-dbi-perl (1.12-3) ... 195s Selecting previously unselected package libbio-db-biofetch-perl. 195s Preparing to unpack .../177-libbio-db-biofetch-perl_1.7.3-4_all.deb ... 195s Unpacking libbio-db-biofetch-perl (1.7.3-4) ... 195s Selecting previously unselected package libcgi-pm-perl. 195s Preparing to unpack .../178-libcgi-pm-perl_4.62-1_all.deb ... 195s Unpacking libcgi-pm-perl (4.62-1) ... 195s Selecting previously unselected package libbio-db-gff-perl. 195s Preparing to unpack .../179-libbio-db-gff-perl_1.7.4-1_all.deb ... 195s Unpacking libbio-db-gff-perl (1.7.4-1) ... 195s Selecting previously unselected package libpq5:ppc64el. 195s Preparing to unpack .../180-libpq5_16.2-1_ppc64el.deb ... 195s Unpacking libpq5:ppc64el (16.2-1) ... 195s Selecting previously unselected package libdbd-pg-perl. 195s Preparing to unpack .../181-libdbd-pg-perl_3.18.0-1build1_ppc64el.deb ... 195s Unpacking libdbd-pg-perl (3.18.0-1build1) ... 195s Selecting previously unselected package libdbd-sqlite3-perl:ppc64el. 195s Preparing to unpack .../182-libdbd-sqlite3-perl_1.74-1build1_ppc64el.deb ... 195s Unpacking libdbd-sqlite3-perl:ppc64el (1.74-1build1) ... 195s Selecting previously unselected package libbio-db-seqfeature-perl. 195s Preparing to unpack .../183-libbio-db-seqfeature-perl_1.7.4-2_all.deb ... 195s Unpacking libbio-db-seqfeature-perl (1.7.4-2) ... 195s Selecting previously unselected package libbio-graphics-perl. 195s Preparing to unpack .../184-libbio-graphics-perl_2.40-6_all.deb ... 195s Unpacking libbio-graphics-perl (2.40-6) ... 195s Selecting previously unselected package libbio-coordinate-perl. 195s Preparing to unpack .../185-libbio-coordinate-perl_1.7.1-4_all.deb ... 195s Unpacking libbio-coordinate-perl (1.7.1-4) ... 195s Selecting previously unselected package libcgi-session-perl. 195s Preparing to unpack .../186-libcgi-session-perl_4.48-4_all.deb ... 195s Unpacking libcgi-session-perl (4.48-4) ... 195s Selecting previously unselected package libjson-perl. 195s Preparing to unpack .../187-libjson-perl_4.10000-1_all.deb ... 195s Unpacking libjson-perl (4.10000-1) ... 196s Selecting previously unselected package libexporter-tiny-perl. 196s Preparing to unpack .../188-libexporter-tiny-perl_1.006002-1_all.deb ... 196s Unpacking libexporter-tiny-perl (1.006002-1) ... 196s Selecting previously unselected package liblist-moreutils-xs-perl. 196s Preparing to unpack .../189-liblist-moreutils-xs-perl_0.430-3build3_ppc64el.deb ... 196s Unpacking liblist-moreutils-xs-perl (0.430-3build3) ... 196s Selecting previously unselected package liblist-moreutils-perl. 196s Preparing to unpack .../190-liblist-moreutils-perl_0.430-2_all.deb ... 196s Unpacking liblist-moreutils-perl (0.430-2) ... 196s Selecting previously unselected package libstatistics-descriptive-perl. 196s Preparing to unpack .../191-libstatistics-descriptive-perl_3.0801-1_all.deb ... 196s Unpacking libstatistics-descriptive-perl (3.0801-1) ... 196s Selecting previously unselected package libhttp-daemon-perl. 196s Preparing to unpack .../192-libhttp-daemon-perl_6.16-1_all.deb ... 196s Unpacking libhttp-daemon-perl (6.16-1) ... 196s Selecting previously unselected package libterm-readkey-perl. 196s Preparing to unpack .../193-libterm-readkey-perl_2.38-2build2_ppc64el.deb ... 196s Unpacking libterm-readkey-perl (2.38-2build2) ... 196s Selecting previously unselected package sqlite3. 196s Preparing to unpack .../194-sqlite3_3.45.1-1_ppc64el.deb ... 196s Unpacking sqlite3 (3.45.1-1) ... 196s Selecting previously unselected package libjs-prototype. 196s Preparing to unpack .../195-libjs-prototype_1.7.3-1_all.deb ... 196s Unpacking libjs-prototype (1.7.3-1) ... 196s Selecting previously unselected package libjs-scriptaculous. 196s Preparing to unpack .../196-libjs-scriptaculous_1.9.0-3_all.deb ... 196s Unpacking libjs-scriptaculous (1.9.0-3) ... 196s Selecting previously unselected package libanyevent-perl. 196s Preparing to unpack .../197-libanyevent-perl_7.170-2build4_ppc64el.deb ... 196s Unpacking libanyevent-perl (7.170-2build4) ... 196s Selecting previously unselected package libanyevent-cachedns-perl. 196s Preparing to unpack .../198-libanyevent-cachedns-perl_0.08-3_all.deb ... 196s Unpacking libanyevent-cachedns-perl (0.08-3) ... 196s Selecting previously unselected package libcommon-sense-perl:ppc64el. 196s Preparing to unpack .../199-libcommon-sense-perl_3.75-3build1_ppc64el.deb ... 196s Unpacking libcommon-sense-perl:ppc64el (3.75-3build1) ... 196s Selecting previously unselected package libanyevent-http-perl. 196s Preparing to unpack .../200-libanyevent-http-perl_2.25-2_all.deb ... 196s Unpacking libanyevent-http-perl (2.25-2) ... 196s Selecting previously unselected package libstring-approx-perl. 196s Preparing to unpack .../201-libstring-approx-perl_3.28-2build2_ppc64el.deb ... 196s Unpacking libstring-approx-perl (3.28-2build2) ... 196s Selecting previously unselected package libxml-namespacesupport-perl. 196s Preparing to unpack .../202-libxml-namespacesupport-perl_1.12-2_all.deb ... 196s Unpacking libxml-namespacesupport-perl (1.12-2) ... 196s Selecting previously unselected package libxml-sax-base-perl. 196s Preparing to unpack .../203-libxml-sax-base-perl_1.09-3_all.deb ... 196s Unpacking libxml-sax-base-perl (1.09-3) ... 196s Selecting previously unselected package libxml-sax-perl. 196s Preparing to unpack .../204-libxml-sax-perl_1.02+dfsg-3_all.deb ... 196s Unpacking libxml-sax-perl (1.02+dfsg-3) ... 196s Selecting previously unselected package libxml-libxml-perl. 196s Preparing to unpack .../205-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1build2_ppc64el.deb ... 196s Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ... 196s Selecting previously unselected package libxml-simple-perl. 196s Preparing to unpack .../206-libxml-simple-perl_2.25-2_all.deb ... 196s Unpacking libxml-simple-perl (2.25-2) ... 196s Selecting previously unselected package libvm-ec2-perl. 196s Preparing to unpack .../207-libvm-ec2-perl_1.28-4_all.deb ... 196s Unpacking libvm-ec2-perl (1.28-4) ... 196s Selecting previously unselected package gbrowse. 196s Preparing to unpack .../208-gbrowse_2.56+dfsg-12build1_all.deb ... 196s Unpacking gbrowse (2.56+dfsg-12build1) ... 196s Selecting previously unselected package gff2aplot. 196s Preparing to unpack .../209-gff2aplot_2.0-15_ppc64el.deb ... 196s Unpacking gff2aplot (2.0-15) ... 196s Selecting previously unselected package gff2ps. 196s Preparing to unpack .../210-gff2ps_0.98l-6_all.deb ... 196s Unpacking gff2ps (0.98l-6) ... 196s Selecting previously unselected package libgclib3:ppc64el. 196s Preparing to unpack .../211-libgclib3_0.12.7+ds-5_ppc64el.deb ... 196s Unpacking libgclib3:ppc64el (0.12.7+ds-5) ... 196s Selecting previously unselected package gffread. 196s Preparing to unpack .../212-gffread_0.12.7-4_ppc64el.deb ... 196s Unpacking gffread (0.12.7-4) ... 196s Selecting previously unselected package htslib-test. 196s Preparing to unpack .../213-htslib-test_1.18+ds-1_all.deb ... 196s Unpacking htslib-test (1.18+ds-1) ... 196s Selecting previously unselected package liblua5.1-0:ppc64el. 196s Preparing to unpack .../214-liblua5.1-0_5.1.5-9_ppc64el.deb ... 196s Unpacking liblua5.1-0:ppc64el (5.1.5-9) ... 196s Selecting previously unselected package libmbedcrypto7:ppc64el. 196s Preparing to unpack .../215-libmbedcrypto7_2.28.7-1ubuntu1_ppc64el.deb ... 196s Unpacking libmbedcrypto7:ppc64el (2.28.7-1ubuntu1) ... 196s Selecting previously unselected package libmbedx509-1:ppc64el. 196s Preparing to unpack .../216-libmbedx509-1_2.28.7-1ubuntu1_ppc64el.deb ... 196s Unpacking libmbedx509-1:ppc64el (2.28.7-1ubuntu1) ... 196s Selecting previously unselected package libmbedtls14:ppc64el. 196s Preparing to unpack .../217-libmbedtls14_2.28.7-1ubuntu1_ppc64el.deb ... 196s Unpacking libmbedtls14:ppc64el (2.28.7-1ubuntu1) ... 196s Selecting previously unselected package libtre5:ppc64el. 196s Preparing to unpack .../218-libtre5_0.8.0-7_ppc64el.deb ... 196s Unpacking libtre5:ppc64el (0.8.0-7) ... 196s Selecting previously unselected package ncbi-data. 196s Preparing to unpack .../219-ncbi-data_6.1.20170106+dfsg1-10_all.deb ... 196s Unpacking ncbi-data (6.1.20170106+dfsg1-10) ... 197s Selecting previously unselected package ncbi-blast+. 197s Preparing to unpack .../220-ncbi-blast+_2.12.0+ds-4_ppc64el.deb ... 197s Unpacking ncbi-blast+ (2.12.0+ds-4) ... 197s Selecting previously unselected package bowtie2. 197s Preparing to unpack .../221-bowtie2_2.5.2-1_ppc64el.deb ... 197s Unpacking bowtie2 (2.5.2-1) ... 197s Selecting previously unselected package samtools. 197s Preparing to unpack .../222-samtools_1.19.2-1_ppc64el.deb ... 197s Unpacking samtools (1.19.2-1) ... 197s Selecting previously unselected package optimir. 197s Preparing to unpack .../223-optimir_1.2-1_all.deb ... 197s Unpacking optimir (1.2-1) ... 197s Selecting previously unselected package proteinortho. 197s Preparing to unpack .../224-proteinortho_6.3.1+dfsg-1_ppc64el.deb ... 197s Unpacking proteinortho (6.3.1+dfsg-1) ... 197s Selecting previously unselected package python3-argcomplete. 197s Preparing to unpack .../225-python3-argcomplete_3.1.4-1_all.deb ... 197s Unpacking python3-argcomplete (3.1.4-1) ... 197s Selecting previously unselected package python3-argh. 197s Preparing to unpack .../226-python3-argh_0.31.2-1_all.deb ... 197s Unpacking python3-argh (0.31.2-1) ... 197s Selecting previously unselected package python3-simplejson. 197s Preparing to unpack .../227-python3-simplejson_3.19.2-1build1_ppc64el.deb ... 197s Unpacking python3-simplejson (3.19.2-1build1) ... 197s Selecting previously unselected package python3-gffutils. 197s Preparing to unpack .../228-python3-gffutils_0.12-2_all.deb ... 197s Unpacking python3-gffutils (0.12-2) ... 197s Selecting previously unselected package python3-pybedtools. 197s Preparing to unpack .../229-python3-pybedtools_0.9.1-1_ppc64el.deb ... 197s Unpacking python3-pybedtools (0.9.1-1) ... 197s Selecting previously unselected package genometools-common. 197s Preparing to unpack .../230-genometools-common_1.6.5+ds-2_all.deb ... 197s Unpacking genometools-common (1.6.5+ds-2) ... 197s Selecting previously unselected package seqan-apps. 197s Preparing to unpack .../231-seqan-apps_2.4.0+dfsg-16_ppc64el.deb ... 197s Unpacking seqan-apps (2.4.0+dfsg-16) ... 198s Selecting previously unselected package autopkgtest-satdep. 198s Preparing to unpack .../232-1-autopkgtest-satdep.deb ... 198s Unpacking autopkgtest-satdep (0) ... 198s Setting up libhtscodecs2:ppc64el (1.6.0-1) ... 198s Setting up libanyevent-perl (7.170-2build4) ... 198s Setting up python3-more-itertools (10.2.0-1) ... 198s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 198s Setting up liblcms2-2:ppc64el (2.14-2) ... 198s Setting up ncbi-data (6.1.20170106+dfsg1-10) ... 198s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 198s Setting up libstring-approx-perl (3.28-2build2) ... 198s Setting up python3-argh (0.31.2-1) ... 198s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 198s Setting up libpaper1:ppc64el (1.1.29) ... 198s 198s Creating config file /etc/papersize with new version 198s Setting up gff2ps (0.98l-6) ... 198s Setting up libtre5:ppc64el (0.8.0-7) ... 198s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 198s Setting up libxpm4:ppc64el (1:3.5.17-1) ... 198s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 198s Setting up libdatrie1:ppc64el (0.2.13-3) ... 198s Setting up libtest-deep-perl (1.204-1) ... 198s Setting up python3-joblib (1.3.2-1) ... 199s Setting up python3-lz4 (4.0.2+dfsg-1build2) ... 199s Setting up libxcb-render0:ppc64el (1.15-1) ... 199s Setting up libclone-perl:ppc64el (0.46-1build1) ... 199s Setting up libalgorithm-diff-perl (1.201-1) ... 199s Setting up htslib-test (1.18+ds-1) ... 199s Setting up python3-unicodedata2 (15.1.0+ds-1) ... 199s Setting up fonts-lyx (2.4.0~RC3-1) ... 199s Setting up libhtml-tagset-perl (3.20-6) ... 199s Setting up unzip (6.0-28ubuntu3) ... 199s Setting up liblwp-mediatypes-perl (6.04-2) ... 199s Setting up python3-threadpoolctl (3.1.0-1) ... 199s Setting up x11-common (1:7.7+23ubuntu2) ... 199s Setting up libtry-tiny-perl (0.31-2) ... 199s Setting up libpq5:ppc64el (16.2-1) ... 199s Setting up libdeflate0:ppc64el (1.19-1) ... 199s Setting up libapr1:ppc64el (1.7.2-3) ... 199s Setting up perl-openssl-defaults:ppc64el (7) ... 199s Setting up libcommon-sense-perl:ppc64el (3.75-3build1) ... 199s Setting up libxml-namespacesupport-perl (1.12-2) ... 199s Setting up libanyevent-http-perl (2.25-2) ... 199s Setting up libqhull-r8.0:ppc64el (2020.2-6) ... 199s Setting up libencode-locale-perl (1.05-3) ... 199s Setting up libxcb-shm0:ppc64el (1.15-1) ... 199s Setting up libpaper-utils (1.1.29) ... 199s Setting up python3-zipp (1.0.0-6) ... 199s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 199s Setting up python3-freetype (2.4.0-1) ... 200s Setting up emboss-data (6.6.0+dfsg-12ubuntu1) ... 200s Setting up python3-networkx (2.8.8-1ubuntu1) ... 201s /usr/lib/python3/dist-packages/networkx/readwrite/tests/test_gml.py:556: SyntaxWarning: invalid octal escape sequence '\420' 201s "graph [edge [ source u'u\4200' target u'u\4200' ] " 201s /usr/lib/python3/dist-packages/networkx/readwrite/tests/test_gml.py:557: SyntaxWarning: invalid octal escape sequence '\420' 201s + "node [ id u'u\4200' label b ] ]" 201s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 201s Setting up diamond-aligner (2.1.9-1) ... 201s Setting up bowtie2 (2.5.2-1) ... 201s Setting up augustus-doc (3.5.0+dfsg-4build1) ... 201s Setting up unicode-data (15.1.0-1) ... 201s Setting up python3-simplejson (3.19.2-1build1) ... 201s Setting up libxml-sax-base-perl (1.09-3) ... 201s Setting up libio-string-perl (1.08-4) ... 201s Setting up python3-decorator (5.1.1-5) ... 201s Setting up zip (3.0-13) ... 201s Setting up libfontenc1:ppc64el (1:1.1.8-1) ... 201s Setting up libblas3:ppc64el (3.12.0-3) ... 201s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 201s Setting up libclass-data-inheritable-perl (0.08-3) ... 201s Setting up python3-packaging (23.2-1) ... 201s Setting up libmbedcrypto7:ppc64el (2.28.7-1ubuntu1) ... 201s Setting up libtext-diff-perl (1.45-2) ... 201s Setting up python3-brotli (1.1.0-2) ... 201s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 201s Setting up python3-cycler (0.11.0-2) ... 202s Setting up libanyevent-cachedns-perl (0.08-3) ... 202s Setting up libimagequant0:ppc64el (2.18.0-1) ... 202s Setting up seqan-apps (2.4.0+dfsg-16) ... 202s Setting up fonts-dejavu-mono (2.37-8) ... 202s Setting up python3-kiwisolver (1.4.4-2) ... 202s Setting up libio-html-perl (1.004-3) ... 202s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 202s Setting up fonts-dejavu-core (2.37-8) ... 202s Setting up liblist-moreutils-xs-perl (0.430-3build3) ... 202s Setting up emboss-test (6.6.0+dfsg-12ubuntu1) ... 202s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 202s Setting up libjs-prototype (1.7.3-1) ... 202s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 202s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 202s Setting up libcapture-tiny-perl (0.48-2) ... 202s Setting up libtimedate-perl (2.3300-2) ... 202s Setting up fonts-dejavu-extra (2.37-8) ... 202s Setting up libdata-stag-perl (0.14-3) ... 202s Setting up pigz (2.8-1) ... 202s Setting up libjson-perl (4.10000-1) ... 202s Setting up liblua5.1-0:ppc64el (5.1.5-9) ... 202s Setting up libxslt1.1:ppc64el (1.1.39-0exp1) ... 202s Setting up libsub-uplevel-perl (0.2800-3) ... 202s Setting up liblua5.4-0:ppc64el (5.4.6-3) ... 202s Setting up libopenjp2-7:ppc64el (2.5.0-2) ... 202s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 202s Setting up libthai-data (0.1.29-2) ... 202s Setting up python3-dateutil (2.8.2-3) ... 202s Setting up sgml-base (1.31) ... 202s Setting up libdevel-stacktrace-perl (2.0500-1) ... 202s Setting up apache2-data (2.4.58-1ubuntu2) ... 202s Setting up libdevel-symdump-perl (2.18-5) ... 202s Setting up libbio-perl-perl (1.7.8-1) ... 202s Setting up libxss1:ppc64el (1:1.2.3-1build2) ... 202s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 202s Setting up bedtools-test (2.31.1+dfsg-2) ... 202s Setting up libexporter-tiny-perl (1.006002-1) ... 202s Setting up libterm-readkey-perl (2.38-2build2) ... 202s Setting up python3-mpmath (1.2.1-3) ... 203s Setting up python3-argcomplete (3.1.4-1) ... 203s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... 203s Setting up libwebpmux3:ppc64el (1.3.2-0.4) ... 203s Setting up gff2aplot (2.0-15) ... 203s Setting up python3-appdirs (1.4.4-4) ... 203s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 203s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 203s Setting up liburi-perl (5.27-1) ... 203s Setting up sqlite3 (3.45.1-1) ... 203s Setting up libdbi-perl:ppc64el (1.643-4build1) ... 203s Setting up libgclib3:ppc64el (0.12.7+ds-5) ... 203s Setting up libaprutil1:ppc64el (1.6.3-1ubuntu1) ... 203s Setting up libnet-ssleay-perl:ppc64el (1.94-1) ... 203s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 203s Setting up python3-sympy (1.12-7) ... 209s Setting up libice6:ppc64el (2:1.0.10-1build2) ... 209s Setting up libhttp-date-perl (6.06-1) ... 209s Setting up liblapack3:ppc64el (3.12.0-3) ... 209s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 209s Setting up libhts3:ppc64el (1.18+ds-1) ... 209s Setting up gffread (0.12.7-4) ... 209s Setting up python3-pysam (0.22.0+ds-1) ... 209s Setting up libfile-listing-perl (6.16-1) ... 209s Setting up python3-importlib-metadata (4.12.0-1) ... 209s Setting up libmbedx509-1:ppc64el (2.28.7-1ubuntu1) ... 209s Setting up libmbedtls14:ppc64el (2.28.7-1ubuntu1) ... 209s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 209s Setting up libjs-scriptaculous (1.9.0-3) ... 209s Setting up liblist-moreutils-perl (0.430-2) ... 209s Setting up libtest-warn-perl (0.37-2) ... 209s Setting up libwebpdemux2:ppc64el (1.3.2-0.4) ... 209s Setting up libtest-differences-perl (0.71-1) ... 209s Setting up libnet-http-perl (6.23-1) ... 209s Setting up libdbd-pg-perl (3.18.0-1build1) ... 209s Setting up libexception-class-perl (1.45-1) ... 209s Setting up libaprutil1-ldap:ppc64el (1.6.3-1ubuntu1) ... 209s Setting up xfonts-utils (1:7.7+6build2) ... 209s Setting up libaprutil1-dbd-sqlite3:ppc64el (1.6.3-1ubuntu1) ... 209s Setting up libxml-sax-perl (1.02+dfsg-3) ... 209s update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... 209s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... 209s 209s Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version 209s Setting up samtools (1.19.2-1) ... 209s Setting up python3-fs (2.4.16-3) ... 210s Setting up ncbi-blast+ (2.12.0+ds-4) ... 210s Setting up libthai0:ppc64el (0.1.29-2) ... 210s Setting up python3-xopen (1.7.0-2) ... 210s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 210s Setting up libtest-exception-perl (0.43-3) ... 210s Setting up libraqm0:ppc64el (0.10.1-1) ... 210s Setting up python3-numpy (1:1.24.2-2) ... 212s Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ... 212s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... 212s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... 212s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... 212s Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version 212s Setting up libwww-robotrules-perl (6.02-1) ... 212s Setting up python3-lxml:ppc64el (5.1.0-1) ... 212s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 212s Setting up xml-core (0.19) ... 213s Setting up libhtml-parser-perl:ppc64el (3.81-1build1) ... 213s Setting up python3-contourpy (1.0.7-1build2) ... 213s Setting up libdbd-sqlite3-perl:ppc64el (1.74-1build1) ... 213s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 213s Setting up libsm6:ppc64el (2:1.2.3-1build2) ... 213s Setting up proteinortho (6.3.1+dfsg-1) ... 213s Setting up libio-socket-ssl-perl (2.085-1) ... 213s Setting up python3-dnaio (1.0.1-1build1) ... 213s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1) ... 213s Setting up libhttp-message-perl (6.45-1ubuntu1) ... 213s Setting up apache2-utils (2.4.58-1ubuntu2) ... 213s Setting up python3-pyfaidx (0.8.1.1-1) ... 213s Setting up libhttp-negotiate-perl (6.01-2) ... 213s Setting up fontconfig (2.15.0-1ubuntu1) ... 215s Regenerating fonts cache... done. 215s Setting up python3-pybedtools (0.9.1-1) ... 216s Setting up libxft2:ppc64el (2.3.6-1) ... 216s Setting up libstatistics-descriptive-perl (3.0801-1) ... 216s Setting up python3-scipy (1.11.4-6) ... 219s Setting up libhttp-cookies-perl (6.11-1) ... 219s Setting up libtest-most-perl (0.38-1) ... 219s Setting up libhtml-tree-perl (5.07-3) ... 219s Setting up python3-pomegranate (0.14.8-4) ... 219s Setting up libtk8.6:ppc64el (8.6.14-1) ... 219s Setting up python3-pandas-lib:ppc64el (2.1.4+dfsg-4ubuntu2) ... 219s Setting up libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 219s Setting up libcgi-pm-perl (4.62-1) ... 219s Setting up python3-sklearn-lib:ppc64el (1.4.1.post1+dfsg-1) ... 219s Setting up fonts-urw-base35 (20200910-8) ... 219s Setting up apache2-bin (2.4.58-1ubuntu2) ... 219s Setting up libcairo2:ppc64el (1.18.0-1) ... 219s Setting up python3-pil:ppc64el (10.2.0-1) ... 219s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 224s Setting up python3-cutadapt (4.4-1build1) ... 225s Setting up libcgi-session-perl (4.48-4) ... 225s Setting up libgd3:ppc64el (2.3.3-9ubuntu1) ... 225s Setting up python3-sklearn (1.4.1.post1+dfsg-1) ... 227s Setting up libxml-simple-perl (2.25-2) ... 227s Setting up libxt6:ppc64el (1:1.2.1-1.1) ... 227s Setting up libhttp-daemon-perl (6.16-1) ... 227s Setting up libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 227s Setting up libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 227s Setting up bioperl (1.7.8-1) ... 227s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... 227s Setting up python3-cairo (1.25.1-2) ... 227s Setting up cutadapt (4.4-1build1) ... 227s Setting up apache2 (2.4.58-1ubuntu2) ... 227s Enabling module mpm_event. 227s Enabling module authz_core. 227s Enabling module authz_host. 227s Enabling module authn_core. 227s Enabling module auth_basic. 227s Enabling module access_compat. 227s Enabling module authn_file. 227s Enabling module authz_user. 227s Enabling module alias. 227s Enabling module dir. 227s Enabling module autoindex. 227s Enabling module env. 227s Enabling module mime. 227s Enabling module negotiation. 227s Enabling module setenvif. 227s Enabling module filter. 227s Enabling module deflate. 227s Enabling module status. 227s Enabling module reqtimeout. 227s Enabling conf charset. 227s Enabling conf localized-error-pages. 227s Enabling conf other-vhosts-access-log. 227s Enabling conf security. 228s Enabling conf serve-cgi-bin. 228s Enabling site 000-default. 228s Created symlink /etc/systemd/system/multi-user.target.wants/apache2.service → /usr/lib/systemd/system/apache2.service. 229s Created symlink /etc/systemd/system/multi-user.target.wants/apache-htcacheclean.service → /usr/lib/systemd/system/apache-htcacheclean.service. 230s Setting up blt (2.5.3+dfsg-7) ... 230s Setting up python3-tk:ppc64el (3.11.5-1) ... 230s Setting up libbio-coordinate-perl (1.7.1-4) ... 230s Setting up libgd-perl (2.78-1build1) ... 230s Setting up python3-pil.imagetk:ppc64el (10.2.0-1) ... 230s Setting up python3-rlpycairo (0.3.0-3) ... 230s Setting up r-base-core (4.3.2-1build1) ... 231s 231s Creating config file /etc/R/Renviron with new version 231s Setting up python3-reportlab (4.1.0-1) ... 231s Setting up genometools-common (1.6.5+ds-2) ... 231s Setting up r-bioc-biocgenerics (0.48.1-2) ... 231s Setting up r-bioc-dnacopy (1.76.0-1) ... 231s Setting up liblwp-protocol-https-perl (6.13-1) ... 231s Setting up libwww-perl (6.76-1) ... 232s Setting up python3-fonttools (4.46.0-1) ... 232s Setting up libapache2-mod-perl2 (2.0.13-1build1) ... 233s apache2_invoke: Enable module perl 233s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 233s Setting up libbio-db-biofetch-perl (1.7.3-4) ... 233s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 234s Setting up libvm-ec2-perl (1.28-4) ... 234s Setting up libapache-dbi-perl (1.12-3) ... 234s Setting up libbio-db-gff-perl (1.7.4-1) ... 234s Setting up libbio-db-seqfeature-perl (1.7.4-2) ... 234s Setting up libbio-graphics-perl (2.40-6) ... 234s Setting up gbrowse (2.56+dfsg-12build1) ... 235s apache2_invoke: Enable configuration gbrowse 235s Processing triggers for man-db (2.12.0-3) ... 237s Processing triggers for install-info (7.1-3) ... 237s Processing triggers for libc-bin (2.39-0ubuntu2) ... 237s Processing triggers for ufw (0.36.2-5) ... 237s Processing triggers for sgml-base (1.31) ... 237s Setting up w3c-sgml-lib (1.3-3) ... 265s Setting up python3-biopython (1.81+dfsg-3) ... 266s Setting up python3-gffutils (0.12-2) ... 266s Setting up cnvkit (0.9.10-1) ... 266s Setting up optimir (1.2-1) ... 267s /usr/lib/python3/dist-packages/optimir/libs/get_counts.py:453: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 267s if prefix is '': 267s Setting up autopkgtest-satdep (0) ... 273s (Reading database ... 94351 files and directories currently installed.) 273s Removing autopkgtest-satdep (0) ... 273s autopkgtest [03:32:14]: test run-tests: [----------------------- 274s /usr/share/doc/augustus/tutorial/data/hints.rnaseq.intron.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/abinitio-browser.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/augustus-ppx.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/hints.est.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/hints.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/hints.rnaseq.ep.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/output-abinitio.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/output-browser.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/output.gff: is okay. 274s /usr/share/doc/augustus/tutorial/results/scipio.gff: is okay. 274s /usr/share/bedtools/test/fisher/tumor.gff: is okay. 274s /usr/share/bedtools/test/intersect/b.issue311.gff: is okay. 274s /usr/share/bedtools/test/intersect/gdc.gff: is okay. 274s /usr/share/bedtools/test/map/test.gff: is okay. 274s /usr/share/bedtools/test/merge/a.gff: is okay. 274s /usr/share/EMBOSS/data/Efeatures.gff2: is okay. 274s /usr/share/EMBOSS/data/Efeatures.gff3: is okay. 274s /usr/share/EMBOSS/data/Etags.gff2: is okay. 274s /usr/share/EMBOSS/data/Etags.gff3: is okay. 274s /usr/share/EMBOSS/test/data/bioperl.gff3: is okay. 274s /usr/share/EMBOSS/test/data/eden1.gff3: is okay. 274s /usr/share/EMBOSS/test/data/featexample1.gff3: is okay. 274s /usr/share/EMBOSS/test/data/gmod-align.gff3: is okay. 274s /usr/share/EMBOSS/test/data/gmod-discontinuous.gff3: Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 1050 1500 . + . ID=Match1;Name=agt830.5;Target=agt830.5 1 451 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 3000 3202 . + . ID=Match1;Name=agt830.5;Target=agt830.5 452 654 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 5410 5500 . - . ID=Match2;Name=agt830.3;Target=agt830.3 505 595 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 7000 7503 . - . ID=Match2;Name=agt830.3;Target=agt830.3 1 504 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 1050 1500 . + . ID=Match3;Name=agt221.5;Target=agt221.5 1 451 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 5000 5500 . + . ID=Match3;Name=agt221.5;Target=agt221.5 452 952 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 est EST_match 7000 7300 . + . ID=Match3;Name=agt221.5;Target=agt221.5 953 1253 274s is okay. 274s /usr/share/EMBOSS/test/data/gmod-eden1.gff3: is okay. 274s Warning: unexpected tab character in last column, line truncated: 274s ctg123 example gene 1050 9000 . + . ID=EDEN;Name=EDEN;Note=protein kinase 274s /usr/share/EMBOSS/test/data/gmod-sonic1.gff3: is okay. 274s /usr/share/EMBOSS/test/data/gmod-sonic2.gff3: is okay. 274s /usr/share/EMBOSS/test/data/gmod-sonic3.gff3: is okay. 274s /usr/share/EMBOSS/test/data/hba.gff: is okay. 274s /usr/share/EMBOSS/test/data/noid.gff: is okay. 274s /usr/share/EMBOSS/test/data/paamir.gff: is okay. 274s /usr/share/EMBOSS/test/data/paamir.gff3: is okay. 274s /usr/share/EMBOSS/test/data/seqexample.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_acceptor.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_core.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_deletion.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_expression.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_extra.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_repeats.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/elegans_sts.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_array.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_domains.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_est.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_est_targets.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_geneproducts.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_genes.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_genes_simple.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_matches.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_microarray.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_phyloalign.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_phyloalign_wigentries.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_remarks.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/data_files/volvox_trace.gff3: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_acceptor.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_core.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_deletion.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_expression.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_extra.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_repeats.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/elegans_sts.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox1.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox2.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox3.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox4.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox4a.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox4b.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox5.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox6.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox7.gff: Warning: unexpected tab character in last column, line truncated: 274s ctgA est HSP 7000 7300 . + . EST agt221.5 274s Warning: unexpected tab character in last column, line truncated: 274s ctgA est HSP 7000 7200 . + . EST agt767.5 274s is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox8.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox9.gff: is okay. 274s /usr/share/gbrowse/htdocs/tutorial/dbgff/data_files/volvox_all.gff: is okay. 274s /usr/share/genometools/gtdata/doc/csa_example_consensus_spliced_alignments.gff3: is okay. 274s /usr/share/genometools/gtdata/doc/csa_example_spliced_alignments.gff3: is okay. 274s /usr/share/doc/gff2aplot/examples/mhcregion/hs-mm.sgp1.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/mhcregion/hs-mm.tblastx.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/mhcregion/hs.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/mhcregion/mm.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.AG.hs-mm.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.AG.hs.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.AG.mm.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.GT.hs-mm.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.GT.hs.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.GT.mm.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.hs.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.hs_utr.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.mm.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/splice_sites/KCRB.mm_utr.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.hs.gene.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.mm.gene.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.mmhs.genomic.blastn.aplot.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.mmhs.genomic.blastn.full.gff: Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 5219 5832 1405 + . Target "NM_005641"; Start 11597; End 12218; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 1719 2099 1122 + . Target "NM_005641"; Start 7067; End 7448; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 664 1262 944 + . Target "NM_005641"; Start 5482; End 6065; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 4851 5137 848 + . Target "NM_005641"; Start 11198; End 11485; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2375 2778 834 + . Target "NM_005641"; Start 8002; End 8402; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3109 3832 831 + . Target "NM_005641"; Start 8902; End 9636; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 4535 4738 741 + . Target "NM_005641"; Start 10806; End 11009; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 1239 1462 724 + . Target "NM_005641"; Start 6393; End 6618; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 1 292 691 + . Target "NM_005641"; Start 5138; End 5426; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2116 2390 654 + . Target "NM_005641"; Start 7444; End 7714; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 550 675 460 + . Target "NM_005641"; Start 5378; End 5504; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 5558 5878 357 + . Target "NM_005641"; Start 11954; End 12278; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3086 3175 253 + . Target "NM_005641"; Start 6827; End 6924; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3079 3192 252 + . Target "NM_005641"; Start 1490; End 1610; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3058 3177 212 + . Target "NM_005641"; Start 10064; End 10180; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3083 3204 205 + . Target "NM_005641"; Start 3564; End 3694; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3056 3172 204 + . Target "NM_005641"; Start 3724; End 3837; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3061 3172 200 + . Target "NM_005641"; Start 3416; End 3528; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3114 3172 195 + . Target "NM_005641"; Start 2801; End 2860; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3028 3190 179 + . Target "NM_005641"; Start 10323; End 10493; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3104 3175 178 + . Target "NM_005641"; Start 8752; End 8825; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3114 3172 177 + . Target "NM_005641"; Start 2194; End 2253; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3111 3177 177 + . Target "NM_005641"; Start 1390; End 1461; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2757 2926 172 + . Target "NM_005641"; Start 6007; End 6180; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2769 2855 170 + . Target "NM_005641"; Start 9981; End 10063; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3118 3192 169 + . Target "NM_005641"; Start 8633; End 8708; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3109 3172 165 + . Target "NM_005641"; Start 10246; End 10311; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2710 3013 164 + . Target "NM_005641"; Start 10244; End 10543; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3111 3190 164 + . Target "NM_005641"; Start 913; End 994; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2728 3006 156 + . Target "NM_005641"; Start 929; End 1212; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2788 2855 151 + . Target "NM_005641"; Start 6612; End 6673; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3118 3167 150 + . Target "NM_005641"; Start 6314; End 6364; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 357 463 150 + . Target "NM_005641"; Start 1748; End 1853; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3082 3156 149 + . Target "NM_005641"; Start 10512; End 10581; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2710 2804 149 + . Target "NM_005641"; Start 4552; End 4647; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2791 2855 142 + . Target "NM_005641"; Start 1283; End 1342; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2797 2842 140 + . Target "NM_005641"; Start 3670; End 3715; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2727 2911 139 + . Target "NM_005641"; Start 605; End 791; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2804 2863 137 + . Target "NM_005641"; Start 8525; End 8585; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 399 453 132 + . Target "NM_005641"; Start 9592; End 9647; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2811 2950 128 + . Target "NM_005641"; Start 8839; End 8979; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2783 3006 127 + . Target "NM_005641"; Start 1290; End 1523; Strand +; Frame .; 274s is okay. 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.mmhs.genomic.blastn.gff: Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 5219 5832 1405 + . Target "NM_005641" 11597 12218 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 1719 2099 1122 + . Target "NM_005641" 7067 7448 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 664 1262 944 + . Target "NM_005641" 5482 6065 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 4851 5137 848 + . Target "NM_005641" 11198 11485 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2375 2778 834 + . Target "NM_005641" 8002 8402 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3109 3832 831 + . Target "NM_005641" 8902 9636 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 4535 4738 741 + . Target "NM_005641" 10806 11009 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 1239 1462 724 + . Target "NM_005641" 6393 6618 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 1 292 691 + . Target "NM_005641" 5138 5426 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2116 2390 654 + . Target "NM_005641" 7444 7714 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 550 675 460 + . Target "NM_005641" 5378 5504 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 5558 5878 357 + . Target "NM_005641" 11954 12278 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3086 3175 253 + . Target "NM_005641" 6827 6924 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3079 3192 252 + . Target "NM_005641" 1490 1610 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3058 3177 212 + . Target "NM_005641" 10064 10180 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3083 3204 205 + . Target "NM_005641" 3564 3694 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3056 3172 204 + . Target "NM_005641" 3724 3837 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3061 3172 200 + . Target "NM_005641" 3416 3528 + .; 274s is okay. 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3114 3172 195 + . Target "NM_005641" 2801 2860 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3028 3190 179 + . Target "NM_005641" 10323 10493 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3104 3175 178 + . Target "NM_005641" 8752 8825 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3114 3172 177 + . Target "NM_005641" 2194 2253 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3111 3177 177 + . Target "NM_005641" 1390 1461 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2757 2926 172 + . Target "NM_005641" 6007 6180 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2769 2855 170 + . Target "NM_005641" 9981 10063 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3118 3192 169 + . Target "NM_005641" 8633 8708 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3109 3172 165 + . Target "NM_005641" 10246 10311 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2710 3013 164 + . Target "NM_005641" 10244 10543 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3111 3190 164 + . Target "NM_005641" 913 994 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2728 3006 156 + . Target "NM_005641" 929 1212 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2788 2855 151 + . Target "NM_005641" 6612 6673 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3118 3167 150 + . Target "NM_005641" 6314 6364 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 357 463 150 + . Target "NM_005641" 1748 1853 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 3082 3156 149 + . Target "NM_005641" 10512 10581 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2710 2804 149 + . Target "NM_005641" 4552 4647 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2791 2855 142 + . Target "NM_005641" 1283 1342 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2797 2842 140 + . Target "NM_005641" 3670 3715 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2727 2911 139 + . Target "NM_005641" 605 791 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2804 2863 137 + . Target "NM_005641" 8525 8585 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 399 453 132 + . Target "NM_005641" 9592 9647 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2811 2950 128 + . Target "NM_005641" 8839 8979 + .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 BLASTN hsp 2783 3006 127 + . Target "NM_005641" 1290 1523 + .; 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.mmhs.genomic.tblastx.aplot.gff: is okay. 274s /usr/share/doc/gff2aplot/examples/wublast/taf6.mmhs.genomic.tblastx.gff: Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4867 5778 839 + . Target "NM_005641"; Start 11212; End 12162; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4874 5785 645 + . Target "NM_005641"; Start 11219; End 12151; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2379 2621 344 + . Target "NM_005641"; Start 8006; End 8248; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 673 1017 321 + . Target "NM_005641"; Start 5471; End 5833; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4519 4773 315 + . Target "NM_005641"; Start 10778; End 11065; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1719 1913 285 + . Target "NM_005641"; Start 7067; End 7261; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2 172 262 + . Target "NM_005641"; Start 5139; End 5309; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1212 1409 252 + . Target "NM_005641"; Start 6373; End 6564; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 762 1061 252 + . Target "NM_005641"; Start 5572; End 5880; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3432 3638 247 + . Target "NM_005641"; Start 9233; End 9439; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2378 2605 227 + . Target "NM_005641"; Start 8005; End 8232; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3140 3613 194 + . Target "NM_005641"; Start 8935; End 9414; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2116 2373 190 + . Target "NM_005641"; Start 7444; End 7698; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 6 173 188 + . Target "NM_005641"; Start 5143; End 5310; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 505 738 187 + . Target "NM_005641"; Start 5322; End 5579; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 7 174 184 + . Target "NM_005641"; Start 5144; End 5311; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1228 1458 178 + . Target "NM_005641"; Start 6368; End 6613; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1906 2100 159 + . Target "NM_005641"; Start 7265; End 7450; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1980 2348 159 + . Target "NM_005641"; Start 7329; End 7676; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1941 2126 136 + . Target "NM_005641"; Start 7288; End 7482; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1104 1226 135 + . Target "NM_005641"; Start 5927; End 6040; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5612 5878 94 + . Target "NM_005641"; Start 12030; End 12278; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2791 2877 73 + . Target "NM_005641"; Start 676; End 744; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3083 3175 71 + . Target "NM_005641"; Start 10044; End 10178; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2773 2880 71 + . Target "NM_005641"; Start 1278; End 1358; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 683 787 65 + . Target "NM_005641"; Start 3408; End 3518; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3503 3724 63 + . Target "NM_005641"; Start 11672; End 11920; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 405 464 61 + . Target "NM_005641"; Start 1930; End 1989; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2790 3026 61 + . Target "NM_005641"; Start 6614; End 6844; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4895 5158 60 + . Target "NM_005641"; Start 11942; End 12223; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4041 4097 60 + . Target "NM_005641"; Start 6339; End 6395; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2785 2850 59 + . Target "NM_005641"; Start 10005; End 10058; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 686 784 59 + . Target "NM_005641"; Start 6667; End 6771; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3121 3186 59 + . Target "NM_005641"; Start 6873; End 6935; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3028 3171 59 + . Target "NM_005641"; Start 3684; End 3836; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3123 3182 59 + . Target "NM_005641"; Start 2946; End 3005; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 304 519 55 + . Target "NM_005641"; Start 9309; End 9518; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4041 4100 54 + . Target "NM_005641"; Start 10281; End 10340; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4047 4109 54 + . Target "NM_005641"; Start 8664; End 8726; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3031 3174 53 + . Target "NM_005641"; Start 10322; End 10477; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 686 772 53 + . Target "NM_005641"; Start 3720; End 3812; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2770 2850 53 + . Target "NM_005641"; Start 6603; End 6668; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3136 3177 53 + . Target "NM_005641"; Start 1110; End 1151; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4579 4647 52 + . Target "NM_005641"; Start 8188; End 8256; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3028 3141 52 + . Target "NM_005641"; Start 685; End 810; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2804 2836 51 + . Target "NM_005641"; Start 8525; End 8557; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3095 3175 51 + . Target "NM_005641"; Start 10407; End 10478; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4002 4097 51 + . Target "NM_005641"; Start 4547; End 4645; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4166 4249 50 + . Target "NM_005641"; Start 7241; End 7333; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5536 5694 50 + . Target "NM_005641"; Start 11141; End 11311; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 555 608 50 + . Target "NM_005641"; Start 7342; End 7392; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 405 464 50 + . Target "NM_005641"; Start 7849; End 7908; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1447 1500 49 + . Target "NM_005641"; Start 6928; End 6978; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2916 3011 49 + . Target "NM_005641"; Start 10443; End 10541; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 931 1125 49 + . Target "NM_005641"; Start 5746; End 5943; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1501 1587 49 + . Target "NM_005641"; Start 7763; End 7849; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3028 3168 49 + . Target "NM_005641"; Start 1465; End 1587; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3121 3168 48 + . Target "NM_005641"; Start 6321; End 6365; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2792 2842 48 + . Target "NM_005641"; Start 3674; End 3715; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3083 3139 48 + . Target "NM_005641"; Start 4520; End 4585; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4029 4091 48 + . Target "NM_005641"; Start 2821; End 2880; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2913 2969 47 + . Target "NM_005641"; Start 8482; End 8538; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3118 3150 47 + . Target "NM_005641"; Start 10544; End 10576; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4047 4097 47 + . Target "NM_005641"; Start 8493; End 8543; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 689 784 47 + . Target "NM_005641"; Start 4665; End 4766; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3086 3115 47 + . Target "NM_005641"; Start 6827; End 6856; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3083 3121 47 + . Target "NM_005641"; Start 6654; End 6692; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3056 3211 47 + . Target "NM_005641"; Start 2989; End 3156; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3136 3168 46 + . Target "NM_005641"; Start 10275; End 10307; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 408 476 46 + . Target "NM_005641"; Start 1798; End 1866; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4888 4950 46 + . Target "NM_005641"; Start 10422; End 10484; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 546 590 46 + . Target "NM_005641"; Start 3051; End 3086; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2806 2844 46 + . Target "NM_005641"; Start 6047; End 6094; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5758 5823 46 + . Target "NM_005641"; Start 10842; End 10907; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2794 2871 46 + . Target "NM_005641"; Start 3670; End 3747; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3621 3713 46 + . Target "NM_005641"; Start 4612; End 4704; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1143 1187 45 + . Target "NM_005641"; Start 8580; End 8624; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3029 3121 45 + . Target "NM_005641"; Start 1299; End 1361; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4047 4091 45 + . Target "NM_005641"; Start 3813; End 3857; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4233 4304 45 + . Target "NM_005641"; Start 2166; End 2240; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4353 4457 45 + . Target "NM_005641"; Start 2071; End 2172; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3817 3882 44 + . Target "NM_005641"; Start 9908; End 9973; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3012 3152 44 + . Target "NM_005641"; Start 8506; End 8667; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3144 3176 44 + . Target "NM_005641"; Start 10447; End 10479; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5430 5534 44 + . Target "NM_005641"; Start 9313; End 9423; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4655 4735 44 + . Target "NM_005641"; Start 6495; End 6575; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3793 3849 44 + . Target "NM_005641"; Start 5563; End 5619; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3118 3165 44 + . Target "NM_005641"; Start 3610; End 3654; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3083 3166 44 + . Target "NM_005641"; Start 1017; End 1100; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5625 5684 44 + . Target "NM_005641"; Start 5493; End 5552; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3138 3176 43 + . Target "NM_005641"; Start 8788; End 8826; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3654 3728 43 + . Target "NM_005641"; Start 9429; End 9503; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 405 476 43 + . Target "NM_005641"; Start 4206; End 4277; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 856 978 43 + . Target "NM_005641"; Start 6448; End 6570; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1600 1629 43 + . Target "NM_005641"; Start 4298; End 4327; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5434 5481 43 + . Target "NM_005641"; Start 10718; End 10765; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3075 3125 43 + . Target "NM_005641"; Start 11897; End 11947; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2978 3019 43 + . Target "NM_005641"; Start 3874; End 3915; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4041 4091 43 + . Target "NM_005641"; Start 1561; End 1608; Strand +; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4866 5786 772 - . Target "NM_005641"; Start 11211; End 12152; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2258 2611 309 - . Target "NM_005641"; Start 7852; End 8238; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 762 1058 293 - . Target "NM_005641"; Start 5572; End 5877; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4518 4721 290 - . Target "NM_005641"; Start 10777; End 10992; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1718 1912 261 - . Target "NM_005641"; Start 7066; End 7260; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3392 3643 250 - . Target "NM_005641"; Start 9172; End 9441; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4 174 236 - . Target "NM_005641"; Start 5141; End 5311; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1259 1408 235 - . Target "NM_005641"; Start 6414; End 6563; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2116 2349 209 - . Target "NM_005641"; Start 7444; End 7677; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3 173 192 - . Target "NM_005641"; Start 5140; End 5310; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2 172 190 - . Target "NM_005641"; Start 5139; End 5309; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2112 2345 166 - . Target "NM_005641"; Start 7440; End 7673; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1998 2099 148 - . Target "NM_005641"; Start 7348; End 7449; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3291 3386 137 - . Target "NM_005641"; Start 9067; End 9162; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 554 769 135 - . Target "NM_005641"; Start 5386; End 5583; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1118 1225 125 - . Target "NM_005641"; Start 5941; End 6039; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5705 5878 83 - . Target "NM_005641"; Start 12081; End 12278; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5677 5877 76 - . Target "NM_005641"; Start 12065; End 12277; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3036 3185 73 - . Target "NM_005641"; Start 6791; End 6934; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3030 3167 67 - . Target "NM_005641"; Start 6242; End 6364; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 930 1091 66 - . Target "NM_005641"; Start 5745; End 5909; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3052 3177 65 - . Target "NM_005641"; Start 10013; End 10180; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4035 4103 65 - . Target "NM_005641"; Start 2824; End 2886; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2978 3142 64 - . Target "NM_005641"; Start 2639; End 2797; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3139 3177 61 - . Target "NM_005641"; Start 1113; End 1151; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3915 4103 60 - . Target "NM_005641"; Start 8367; End 8549; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2999 3148 60 - . Target "NM_005641"; Start 686; End 817; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3136 3180 59 - . Target "NM_005641"; Start 10439; End 10483; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3089 3190 58 - . Target "NM_005641"; Start 884; End 994; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4041 4103 57 - . Target "NM_005641"; Start 10281; End 10340; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2769 2870 57 - . Target "NM_005641"; Start 5032; End 5118; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4041 4103 57 - . Target "NM_005641"; Start 3807; End 3863; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3121 3177 56 - . Target "NM_005641"; Start 1405; End 1461; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 638 715 56 - . Target "NM_005641"; Start 10988; End 11065; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3115 3186 55 - . Target "NM_005641"; Start 6849; End 6935; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3089 3166 55 - . Target "NM_005641"; Start 4821; End 4907; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 399 542 54 - . Target "NM_005641"; Start 1789; End 1911; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2789 2944 54 - . Target "NM_005641"; Start 1282; End 1452; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3041 3163 54 - . Target "NM_005641"; Start 2112; End 2240; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 5574 5693 53 - . Target "NM_005641"; Start 11203; End 11310; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2728 3000 53 - . Target "NM_005641"; Start 4572; End 4838; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2986 3189 53 - . Target "NM_005641"; Start 3493; End 3678; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 399 503 53 - . Target "NM_005641"; Start 9591; End 9707; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 405 467 52 - . Target "NM_005641"; Start 1930; End 1992; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2785 3006 52 - . Target "NM_005641"; Start 2692; End 2925; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3142 3171 52 - . Target "NM_005641"; Start 3807; End 3836; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3139 3195 52 - . Target "NM_005641"; Start 1558; End 1614; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 224 295 51 - . Target "NM_005641"; Start 298; End 369; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2784 2855 51 - . Target "NM_005641"; Start 10004; End 10063; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2787 2855 51 - . Target "NM_005641"; Start 6611; End 6673; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3135 3176 51 - . Target "NM_005641"; Start 1109; End 1150; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3032 3148 50 - . Target "NM_005641"; Start 8535; End 8663; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3918 4088 50 - . Target "NM_005641"; Start 8541; End 8705; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3122 3190 50 - . Target "NM_005641"; Start 2945; End 3013; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3577 3663 50 - . Target "NM_005641"; Start 3545; End 3634; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2659 2865 49 - . Target "NM_005641"; Start 5924; End 6115; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3121 3171 49 - . Target "NM_005641"; Start 3480; End 3527; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3118 3171 49 - . Target "NM_005641"; Start 2809; End 2859; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 399 521 48 - . Target "NM_005641"; Start 4200; End 4301; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3135 3173 48 - . Target "NM_005641"; Start 10438; End 10476; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2905 3006 48 - . Target "NM_005641"; Start 6192; End 6299; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4020 4103 48 - . Target "NM_005641"; Start 2202; End 2279; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3139 3189 47 - . Target "NM_005641"; Start 10278; End 10328; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1973 2083 47 - . Target "NM_005641"; Start 1531; End 1635; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4043 4114 47 - . Target "NM_005641"; Start 3809; End 3883; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4227 4262 46 - . Target "NM_005641"; Start 10701; End 10736; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3142 3177 46 - . Target "NM_005641"; Start 8487; End 8522; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2915 2968 46 - . Target "NM_005641"; Start 10442; End 10495; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3577 3639 46 - . Target "NM_005641"; Start 10736; End 10804; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3077 3163 46 - . Target "NM_005641"; Start 6691; End 6771; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1179 1295 46 - . Target "NM_005641"; Start 7256; End 7369; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4040 4096 46 - . Target "NM_005641"; Start 6338; End 6394; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2915 2968 46 - . Target "NM_005641"; Start 3495; End 3548; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 903 1046 45 - . Target "NM_005641"; Start 41; End 181; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1882 1920 45 - . Target "NM_005641"; Start 9717; End 9755; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2138 2248 45 - . Target "NM_005641"; Start 207; End 329; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4556 4660 45 - . Target "NM_005641"; Start 6331; End 6435; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2802 2915 45 - . Target "NM_005641"; Start 3675; End 3797; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4041 4067 45 - . Target "NM_005641"; Start 812; End 838; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3104 3148 44 - . Target "NM_005641"; Start 10530; End 10574; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 949 984 44 - . Target "NM_005641"; Start 6325; End 6360; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 2110 2166 44 - . Target "NM_005641"; Start 12002; End 12058; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4348 4377 44 - . Target "NM_005641"; Start 2060; End 2089; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3140 3181 43 - . Target "NM_005641"; Start 8790; End 8831; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4529 4606 43 - . Target "NM_005641"; Start 10185; End 10262; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 1189 1383 43 - . Target "NM_005641"; Start 6370; End 6537; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3119 3193 43 - . Target "NM_005641"; Start 4864; End 4938; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 3120 3167 43 - . Target "NM_005641"; Start 1542; End 1586; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 632 706 43 - . Target "NM_005641"; Start 9145; End 9219; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4355 4378 43 - . Target "NM_005641"; Start 2069; End 2092; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4352 4402 43 - . Target "NM_005641"; Start 2070; End 2120; Strand -; Frame .; 274s Warning: unexpected tab character in last column, line truncated: 274s NM_009315 TBLASTX hsp 4639 4668 43 - . Target "NM_005641"; Start 3306; End 3335; Strand -; Frame .; 274s is okay. 274s /usr/share/doc/gff2ps/test-data/Hsap_BTK_annotation.gff: is okay. 274s /usr/share/doc/gff2ps/test-data/Hsap_BTK_geneid.gff: Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 1728 1787 0.09 - 0 gene_1 # AA 212:231 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 2506 2618 2.93 - 2 gene_1 # AA 174:211 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 4112 4225 0.50 - 2 gene_1 # AA 136:174 274s is okay. 274s /usr/share/doc/gff2ps/test-data/Hsap_BTK_genscan.gff: is okay. 274s /usr/share/doc/gff2ps/test-data/Hsap_BTK_sgp3X.gff: Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 8833 8959 -0.24 - 0 gene_1 # AA 94:136 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 9956 10089 1.98 - 2 gene_1 # AA 49: 93 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 13081 13159 0.13 - 0 gene_1 # AA 23: 49 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 First 13984 14049 -0.61 - 0 gene_1 # AA 1: 22 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Terminal 17520 17785 4.22 - 2 gene_2 # AA 86:174 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 First 19296 19551 14.31 - 0 gene_2 # AA 1: 86 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Terminal 76391 76462 1.12 - 0 gene_3 # AA 636:659 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 79700 79857 1.52 - 2 gene_3 # AA 583:635 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 80376 80494 0.93 - 1 gene_3 # AA 543:583 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 81136 81200 0.46 - 0 gene_3 # AA 522:543 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 82558 82774 5.08 - 1 gene_3 # AA 449:521 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 83290 83533 4.90 - 2 gene_3 # AA 368:449 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 84816 84943 0.10 - 1 gene_3 # AA 325:368 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 85123 85202 1.44 - 0 gene_3 # AA 299:325 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 85799 85853 0.18 - 1 gene_3 # AA 280:298 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 86594 86656 1.66 - 1 gene_3 # AA 259:280 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 87074 87261 4.48 - 0 gene_3 # AA 197:259 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 88679 88746 -0.20 - 2 gene_3 # AA 174:196 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 89067 89195 2.37 - 2 gene_3 # AA 131:174 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 96504 96585 -1.14 - 0 gene_3 # AA 104:131 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 98139 98207 2.20 - 0 gene_3 # AA 81:103 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 101042 101140 1.03 - 0 gene_3 # AA 48: 80 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 First 101650 101790 2.04 - 0 gene_3 # AA 1: 47 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 First 117154 117294 -1.72 + 0 gene_4 # AA 1: 47 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 117965 118070 4.71 + 0 gene_4 # AA 48: 83 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 118261 118328 1.96 + 2 gene_4 # AA 83:105 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Terminal 122234 122254 -1.95 + 0 gene_4 # AA 106:112 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Terminal 124315 124605 1.49 - 0 gene_5 # AA 321:417 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 124876 125073 4.19 - 0 gene_5 # AA 255:320 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 125291 125452 1.81 - 0 gene_5 # AA 201:254 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 128085 128315 6.42 - 0 gene_5 # AA 124:200 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 130317 130491 3.37 - 1 gene_5 # AA 65:123 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 First 134216 134409 3.06 - 0 gene_5 # AA 1: 65 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Single 138576 139844 33.14 + 0 gene_6 # AA 1:423 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 First 144801 145043 4.49 + 0 gene_7 # AA 1: 81 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 170448 170661 4.00 + 0 gene_7 # AA 82:153 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK geneid_v1.0 Internal 172504 172550 0.78 + 2 gene_7 # AA 153:168 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 4565 4627 8.56 - 0 gene_1 # AA 149:169 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 9956 10143 23.75 - 2 gene_1 # AA 86:148 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 19296 19551 15.97 - 0 gene_1 # AA 1: 86 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 62698 62700 -9.86 + 0 gene_2 # AA 1: 1 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Terminal 67179 67508 54.90 + 0 gene_2 # AA 2:111 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Terminal 73005 73235 25.73 - 0 gene_3 # AA 75:151 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 74949 75170 18.73 - 0 gene_3 # AA 1: 74 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Terminal 79661 79857 26.63 - 2 gene_4 # AA 643:708 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 80376 80494 21.80 - 1 gene_4 # AA 603:643 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 81136 81200 -1.59 - 0 gene_4 # AA 582:603 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 82558 82813 51.33 - 1 gene_4 # AA 496:581 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 83290 83533 36.85 - 2 gene_4 # AA 415:496 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 84015 84089 4.73 - 2 gene_4 # AA 390:415 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 84816 84943 22.24 - 1 gene_4 # AA 347:390 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 85123 85202 -0.04 - 0 gene_4 # AA 321:347 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 85799 85853 7.75 - 1 gene_4 # AA 302:320 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 86594 86656 13.00 - 1 gene_4 # AA 281:302 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 87074 87261 30.63 - 0 gene_4 # AA 219:281 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 88679 88746 2.93 - 2 gene_4 # AA 196:218 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 89067 89195 23.15 - 2 gene_4 # AA 153:196 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 96504 96585 8.97 - 0 gene_4 # AA 126:153 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 98139 98207 0.53 - 0 gene_4 # AA 103:125 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 101042 101140 16.57 - 0 gene_4 # AA 70:102 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 101650 101856 25.46 - 0 gene_4 # AA 1: 69 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 117550 117552 -2.98 + 0 gene_5 # AA 1: 1 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 117965 118070 22.92 + 0 gene_5 # AA 2: 37 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 118261 118328 16.58 + 2 gene_5 # AA 37: 59 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 121841 121963 15.59 + 0 gene_5 # AA 60:100 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Terminal 122234 122254 -4.89 + 0 gene_5 # AA 101:107 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Terminal 124315 124605 22.92 - 0 gene_6 # AA 299:395 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 124876 125073 18.14 - 0 gene_6 # AA 233:298 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 125291 125439 21.75 - 2 gene_6 # AA 183:232 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 128138 128315 26.47 - 0 gene_6 # AA 124:183 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Internal 130317 130491 29.80 - 1 gene_6 # AA 65:123 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 134216 134409 27.80 - 0 gene_6 # AA 1: 65 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Single 138495 139844 385.08 + 0 gene_7 # AA 1:450 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X First 143504 143527 -6.11 + 0 gene_8 # AA 1: 8 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.3X Terminal 170195 170470 60.77 + 0 gene_8 # AA 9:100 274s is okay. 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 2506 2618 3.13 - 2 gene_1 # AA 86:123 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol First 19296 19551 15.97 - 0 gene_1 # AA 1: 86 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Terminal 73005 73166 23.20 - 0 gene_2 # AA 45: 98 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol First 75039 75170 14.19 - 0 gene_2 # AA 1: 44 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Terminal 76391 76462 7.44 - 0 gene_3 # AA 692:715 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 79700 79857 27.01 - 2 gene_3 # AA /usr/share/doc/gff2ps/test-data/Hsap_BTK_sgpFO.gff: 639:691 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 80376 80494 22.45 - 1 gene_3 # AA 599:639 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 81136 81200 8.61 - 0 gene_3 # AA 578:599 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 82558 82774 44.53 - 1 gene_3 # AA 505:577 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 83290 83533 36.85 - 2 gene_3 # AA 424:505 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 84015 84089 4.73 - 2 gene_3 # AA 399:424 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 84816 84943 22.49 - 1 gene_3 # AA 356:399 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 85123 85202 -0.04 - 0 gene_3 # AA 330:356 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 85799 85853 7.75 - 1 gene_3 # AA 311:329 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 86594 86656 13.00 - 1 gene_3 # AA 290:311 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 87074 87261 30.63 - 0 gene_3 # AA 228:290 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 88679 88746 2.93 - 2 gene_3 # AA 205:227 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 89067 89195 23.15 - 2 gene_3 # AA 162:205 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 96504 96585 8.97 - 0 gene_3 # AA 135:162 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 98139 98207 9.18 - 0 gene_3 # AA 112:134 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 101042 101140 16.57 - 0 gene_3 # AA 79:111 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 101650 101839 30.76 - 1 gene_3 # AA 15: 78 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol First 112445 112488 -1.77 - 0 gene_3 # AA 1: 15 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol First 117550 117552 -2.98 + 0 gene_4 # AA 1: 1 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 117965 118070 22.92 + 0 gene_4 # AA 2: 37 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 118261 118328 16.58 + 2 gene_4 # AA 37: 59 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 121841 121963 15.59 + 0 gene_4 # AA 60:100 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Terminal 122234 122254 -4.89 + 0 gene_4 # AA 101:107 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Terminal 124315 124605 22.92 - 0 gene_5 # AA 334:430 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 124876 125073 37.51 - 0 gene_5 # AA 268:333 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 125291 125452 26.77 - 0 gene_5 # AA 214:267 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 127172 127263 5.78 - 2 gene_5 # AA 183:213 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 128138 128315 37.95 - 0 gene_5 # AA 124:183 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 130317 130491 30.15 - 1 gene_5 # AA 65:123 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol First 134216 134409 27.80 - 0 gene_5 # AA 1: 65 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Single 138495 139844 270.80 + 0 gene_6 # AA 1:450 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol First 170637 170661 -0.90 + 0 gene_7 # AA 1: 9 274s Warning: unexpected tab character in last column, line truncated: 274s Hsap_BTK SGP.homol Internal 172504 172550 2.43 + 2 gene_7 # AA 9: 24 274s is okay. 274s /usr/share/htslib-test/test/tabix/gff_file.gff: is okay. 274s /usr/share/doc/libbio-graphics-perl/examples/feature_data.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/FBgn0031208.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/gff_example1.gff3: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/gms2_example.gff3: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/hybrid1.gff3: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/intro_docs_example.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/issue167.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/issue_197.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/keyval_sep_in_attrs.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/random-chr.gff: is okay. 274s /usr/lib/python3/dist-packages/gffutils/test/data/synthetic.gff3: is okay. 274s /usr/share/doc/seqan-apps/gustaf/example/stellar.gff: is okay. 274s /usr/share/doc/seqan-apps/insegt/example/annotations.gff: is okay. 274s /usr/share/doc/seqan-apps/insegt/example/readOutput.gff: is okay. 274s /usr/share/doc/seqan-apps/insegt/example/tupleOutput.gff: is okay. 274s /usr/share/doc/seqan-apps/snp_store/example/exampleReads.gff: is okay. 274s /usr/share/doc/cnvkit/examples/test/formats/example.gff: is okay. 274s /usr/lib/python3/dist-packages/optimir/resources/coordinates/hsa_miRBase_v21.gff3: is okay. 274s /usr/lib/python3/dist-packages/optimir/resources/coordinates/hsa_miRBase_v22.gff3: is okay. 274s /usr/lib/python3/dist-packages/optimir/resources/coordinates/hsa_miRgeneDB_v2.gff3: is okay. 274s /usr/share/doc/proteinortho/examples/C.gff: is okay. 274s /usr/share/doc/proteinortho/examples/C2.gff: is okay. 274s /usr/share/doc/proteinortho/examples/E.gff: is okay. 274s /usr/share/doc/proteinortho/examples/L.gff: is okay. 274s /usr/share/doc/proteinortho/examples/M.gff: is okay. 274s /usr/lib/python3/dist-packages/pybedtools/test/data/d.gff: is okay. 274s /usr/lib/python3/dist-packages/pybedtools/test/data/exons.gff: is okay. 274s /usr/lib/python3/dist-packages/pybedtools/test/data/gdc.gff: is okay. 274s /usr/lib/python3/dist-packages/pybedtools/test/data/hg19.gff: is okay. 275s autopkgtest [03:32:16]: test run-tests: -----------------------] 275s run-tests PASS 275s autopkgtest [03:32:16]: test run-tests: - - - - - - - - - - results - - - - - - - - - - 275s autopkgtest [03:32:16]: @@@@@@@@@@@@@@@@@@@@ summary 275s run-tests PASS 286s Creating nova instance adt-noble-ppc64el-gffread-20240323-032741-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240322.img (UUID 8499323f-6fcd-4f77-8a53-77410adea6d3)...