0s autopkgtest [23:33:04]: starting date: 2024-03-08
  0s autopkgtest [23:33:04]: git checkout: d9c0295 adt_testbed.py: supress warnings from apt using a shell pipeline
  0s autopkgtest [23:33:04]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.cyb5h5tm/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:zlib --apt-upgrade bedops --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=zlib/1:1.3.dfsg-3.1ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-ppc64el-5.secgroup --name adt-noble-ppc64el-bedops-20240308-233303-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/
160s autopkgtest [23:35:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup
160s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
160s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [35.7 kB]
160s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [2546 kB]
161s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [437 kB]
161s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [3976 B]
161s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [578 kB]
161s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B]
161s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B]
161s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B]
161s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [2754 kB]
161s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B]
161s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [37.0 kB]
161s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B]
163s Fetched 6522 kB in 2s (3459 kB/s)
163s Reading package lists...
168s Reading package lists...
168s Building dependency tree...
168s Reading state information...
168s Calculating upgrade...
168s The following packages will be upgraded:
168s   zlib1g
169s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
169s Need to get 72.8 kB of archives.
169s After this operation, 0 B of additional disk space will be used.
169s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el zlib1g ppc64el 1:1.3.dfsg-3.1ubuntu1 [72.8 kB]
169s Fetched 72.8 kB in 0s (248 kB/s)
169s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 70107 files and directories currently installed.)
169s Preparing to unpack .../zlib1g_1%3a1.3.dfsg-3.1ubuntu1_ppc64el.deb ...
169s Unpacking zlib1g:ppc64el (1:1.3.dfsg-3.1ubuntu1) over (1:1.3.dfsg-3ubuntu1) ...
169s Setting up zlib1g:ppc64el (1:1.3.dfsg-3.1ubuntu1) ...
169s Processing triggers for libc-bin (2.39-0ubuntu2) ...
169s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
169s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
170s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
170s Reading package lists...
170s Building dependency tree...
170s Reading state information...
170s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
171s sh: Attempting to set up Debian/Ubuntu apt sources automatically
171s sh: Distribution appears to be Ubuntu
174s Reading package lists...
174s Building dependency tree...
174s Reading state information...
174s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1eatmydata is already the newest version (131-1).
174s dbus is already the newest version (1.14.10-4ubuntu1).
174s dbus set to manually installed.
174s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
174s 
174s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
174s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
174s Reading package lists...
175s Building dependency tree...
175s Reading state information...
175s rng-tools-debian is already the newest version (2.4).
175s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
175s Reading package lists...
175s Building dependency tree...
175s Reading state information...
175s haveged is already the newest version (1.9.14-1ubuntu1).
175s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
175s Reading package lists...
176s Building dependency tree...
176s Reading state information...
176s The following packages will be REMOVED:
176s   cloud-init* python3-configobj* python3-debconf*
176s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
176s After this operation, 3248 kB disk space will be freed.
176s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 70107 files and directories currently installed.)
176s Removing cloud-init (24.1-0ubuntu1) ...
176s Removing python3-configobj (5.0.8-3) ...
176s Removing python3-debconf (1.5.86) ...
177s Processing triggers for man-db (2.12.0-3) ...
177s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 69718 files and directories currently installed.)
177s Purging configuration files for cloud-init (24.1-0ubuntu1) ...
178s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
178s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
178s Reading package lists...
178s Building dependency tree...
178s Reading state information...
178s linux-generic is already the newest version (6.8.0-11.11+1).
178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
179s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
179s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
179s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
179s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
179s Hit:5 http://ftpmaster.internal/ubuntu noble-backports InRelease
183s Reading package lists...
183s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
183s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
183s Reading package lists...
183s Building dependency tree...
183s Reading state information...
183s Calculating upgrade...
183s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
183s Reading package lists...
183s Building dependency tree...
183s Reading state information...
184s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
184s autopkgtest [23:36:08]: rebooting testbed after setup commands that affected boot
356s autopkgtest [23:39:00]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024
356s autopkgtest [23:39:00]: testbed dpkg architecture: ppc64el
357s autopkgtest [23:39:01]: @@@@@@@@@@@@@@@@@@@@ apt-source bedops
358s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1
358s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
358s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2
360s Get:1 http://ftpmaster.internal/ubuntu noble/universe bedops 2.4.41+dfsg-1 (dsc) [2178 B]
360s Get:2 http://ftpmaster.internal/ubuntu noble/universe bedops 2.4.41+dfsg-1 (tar) [13.5 MB]
360s Get:3 http://ftpmaster.internal/ubuntu noble/universe bedops 2.4.41+dfsg-1 (diff) [10.4 kB]
360s gpgv: Signature made Mon Jul 18 09:03:24 2022 UTC
360s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
360s gpgv:                issuer "tille@debian.org"
360s gpgv: Can't check signature: No public key
360s dpkg-source: warning: cannot verify inline signature for ./bedops_2.4.41+dfsg-1.dsc: no acceptable signature found
360s autopkgtest [23:39:04]: testing package bedops version 2.4.41+dfsg-1
360s autopkgtest [23:39:04]: build not needed
362s autopkgtest [23:39:06]: test run-unit-test: preparing testbed
367s Reading package lists...
367s Building dependency tree...
367s Reading state information...
367s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
367s Starting 2 pkgProblemResolver with broken count: 0
367s Done
367s  Done
367s Starting pkgProblemResolver with broken count: 0
367s Starting 2 pkgProblemResolver with broken count: 0
367s Done
368s The following additional packages will be installed:
368s   bedops bedops-doc fonts-mathjax libjs-jquery libjs-mathjax libjs-sphinxdoc
368s   libjs-underscore tcsh
368s Suggested packages:
368s   fonts-mathjax-extras fonts-stix libjs-mathjax-doc
368s Recommended packages:
368s   javascript-common
368s The following NEW packages will be installed:
368s   bedops bedops-doc fonts-mathjax libjs-jquery libjs-mathjax libjs-sphinxdoc
368s   libjs-underscore tcsh
368s 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded.
368s 1 not fully installed or removed.
368s Need to get 32.3 MB of archives.
368s After this operation, 89.6 MB of additional disk space will be used.
368s Get:1 http://ftpmaster.internal/ubuntu noble/universe ppc64el tcsh ppc64el 6.24.10-3 [524 kB]
368s Get:2 http://ftpmaster.internal/ubuntu noble/universe ppc64el bedops ppc64el 2.4.41+dfsg-1 [1370 kB]
368s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
368s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
368s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-sphinxdoc all 7.2.6-4 [149 kB]
368s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
368s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
369s Get:8 http://ftpmaster.internal/ubuntu noble/universe ppc64el bedops-doc all 2.4.41+dfsg-1 [21.9 MB]
369s Fetched 32.3 MB in 2s (21.3 MB/s)
369s Selecting previously unselected package tcsh.
370s (Reading database ... 
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(Reading database ... 69663 files and directories currently installed.)
370s Preparing to unpack .../0-tcsh_6.24.10-3_ppc64el.deb ...
370s Unpacking tcsh (6.24.10-3) ...
370s Selecting previously unselected package bedops.
370s Preparing to unpack .../1-bedops_2.4.41+dfsg-1_ppc64el.deb ...
370s Unpacking bedops (2.4.41+dfsg-1) ...
370s Selecting previously unselected package libjs-jquery.
370s Preparing to unpack .../2-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
370s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
370s Selecting previously unselected package libjs-underscore.
370s Preparing to unpack .../3-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
370s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
370s Selecting previously unselected package libjs-sphinxdoc.
370s Preparing to unpack .../4-libjs-sphinxdoc_7.2.6-4_all.deb ...
370s Unpacking libjs-sphinxdoc (7.2.6-4) ...
370s Selecting previously unselected package fonts-mathjax.
370s Preparing to unpack .../5-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
370s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
370s Selecting previously unselected package libjs-mathjax.
370s Preparing to unpack .../6-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
370s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
371s Selecting previously unselected package bedops-doc.
371s Preparing to unpack .../7-bedops-doc_2.4.41+dfsg-1_all.deb ...
371s Unpacking bedops-doc (2.4.41+dfsg-1) ...
371s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
371s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
371s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
371s Setting up tcsh (6.24.10-3) ...
371s update-alternatives: using /bin/tcsh to provide /bin/csh (csh) in auto mode
371s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
371s Setting up libjs-sphinxdoc (7.2.6-4) ...
371s Setting up bedops (2.4.41+dfsg-1) ...
371s Setting up bedops-doc (2.4.41+dfsg-1) ...
371s Setting up autopkgtest-satdep (0) ...
371s Processing triggers for debianutils (5.16) ...
371s Processing triggers for man-db (2.12.0-3) ...
374s (Reading database ... 74781 files and directories currently installed.)
374s Removing autopkgtest-satdep (0) ...
376s autopkgtest [23:39:20]: test run-unit-test: [-----------------------
376s Testing bedops
376s Testing binary [bedops] and build type []
376s make[1]: Entering directory '/tmp/autopkgtest.9x7x0k/autopkgtest_tmp/tests/bedops'
376s Missing binary [bedops] for build type []
376s Writing to [/tmp/tmp.mR0swTg8RM]
376s bedops --version
376s bedops
376s   citation: http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract
376s             https://doi.org/10.1093/bioinformatics/bts277
376s   version:  2.4.41 (typical)
376s   authors:  Shane Neph & Scott Kuehn
376s [bedops- --merge] - [Test 001] ...passed!
376s [bedops- --merge] - [Test 002] ...passed!
376s [bedops- --merge] - [Test 003] ...passed!
376s [bedops- --merge] - [Test 004] ...passed!
376s [bedops- --merge] - [Test 005] ...passed!
376s [bedops- --merge] - [Test 006] ...passed!
376s [bedops- --merge] - [Test 007] ...passed!
376s [bedops- --merge] - [Test 008] ...passed!
376s [bedops- --merge] - [Test 009] ...passed!
376s [bedops- --complement] - [Test 001] ...passed!
376s [bedops- --complement] - [Test 002] ...passed!
376s [bedops- --complement] - [Test 003] ...passed!
376s [bedops- --complement] - [Test 004] ...passed!
376s [bedops- --complement] - [Test 005] ...passed!
376s [bedops- --complement] - [Test 006] ...passed!
376s [bedops- --complement] - [Test 007] ...passed!
376s [bedops- --complement] - [Test 008] ...passed!
376s [bedops- --complement] - [Test 009] ...passed!
376s [bedops- --intersection] - [Test 001] ...passed!
376s [bedops- --intersection] - [Test 002] ...passed!
376s [bedops- --intersection] - [Test 003] ...passed!
376s [bedops- --intersection] - [Test 004] ...passed!
376s [bedops- --difference] - [Test 001] ...passed!
376s [bedops- --difference] - [Test 002] ...passed!
376s [bedops- --difference] - [Test 003] ...passed!
376s [bedops- --difference] - [Test 004] ...passed!
376s [bedops- --difference] - [Test 005] ...passed!
376s [bedops- --difference] - [Test 006] ...passed!
376s [bedops- --difference] - [Test 007] ...passed!
376s [bedops- --symdiff] - [Test 001] ...passed!
376s [bedops- --symdiff] - [Test 002] ...passed!
376s [bedops- --symdiff] - [Test 003] ...passed!
376s [bedops- --symdiff] - [Test 004] ...passed!
376s [bedops- --symdiff] - [Test 005] ...passed!
376s [bedops- --element-of] - [Test 001] ...passed!
376s [bedops- --element-of] - [Test 002] ...passed!
376s [bedops- --element-of] - [Test 003] ...passed!
376s [bedops- --element-of] - [Test 004] ...passed!
376s [bedops- --not-element-of] - [Test 001] ...passed!
376s [bedops- --not-element-of] - [Test 002] ...passed!
376s [bedops- --not-element-of] - [Test 003] ...passed!
376s [bedops- --union] - [Test 001] ...passed!
376s [bedops- --union] - [Test 002] ...passed!
376s [bedops- --union] - [Test 003] ...passed!
376s [bedops- --union] - [Test 004] ...passed!
376s [bedops- --union] - [Test 005] ...passed!
376s [bedops- --union] - [Test 006] ...passed!
376s [bedops- --union] - [Test 007] ...passed!
376s [bedops- --union] - [Test 008] ...passed!
376s [bedops- --union] - [Test 009] ...passed!
376s [bedops- --partition] - [Test 001] ...passed!
376s [bedops- --partition] - [Test 002] ...passed!
376s [bedops- --partition] - [Test 003] ...passed!
376s [bedops- --partition] - [Test 004] ...passed!
376s [bedops- --partition] - [Test 005] ...passed!
376s [bedops- --chrom] - [Test 001] ...passed!
376s [bedops- --chrom] - [Test 002] ...passed!
376s [bedops- --chrom] - [Test 003] ...passed!
376s [bedops- --chrom] - [Test 004] ...passed!
376s [bedops- --chop] - [Test 001] ...passed!
377s [bedops- --chop] - [Test 002] ...passed!
377s [bedops- --chop] - [Test 003] ...passed!
377s [bedops- --chop] - [Test 004] ...passed!
377s [bedops- --chop] - [Test 005] ...passed!
377s [bedops- --stdin] - [Test 001] ...passed!
377s [bedops- --named-pipe] - [Test 001] ...passed!
377s [bedops- --ec] - [Test 001]make[1]: *** [Makefile:380: ec] Error 1
377s make: *** [Makefile:10: all] Error 2
377s  ...passed! (not expected to pass)
377s make[1]: Leaving directory '/tmp/autopkgtest.9x7x0k/autopkgtest_tmp/tests/bedops'
377s Testing starch
377s Testing binary group [starch] and build type []
377s make[1]: Entering directory '/tmp/autopkgtest.9x7x0k/autopkgtest_tmp/tests/starch'
377s Missing binary [unstarch] for build type []
377s Writing to [/tmp/tmp.ywJwLGRxsy]
377s unstarch --version
377s unstarch
377s   binary version: 2.4.41 (typical) (extracts archive version: 2.2.0 or older)
377s [starch-unstarch- --signature] - [Test 001] ...passed!
377s [starch-unstarch- --signature] - [Test 002] ...passed!
377s Missing binary [bedops-starch] for build type []
377s bedops-starch --version
377s starch
377s   binary version: 2.4.41 (typical) (creates archive version: 2.2.0)
377s Writing to [/tmp/tmp.ywJwLGRxsy]
377s Missing binary [bedmap] for build type []
377s bedmap --help
377s bedmap
377s   citation: http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract
377s             https://doi.org/10.1093/bioinformatics/bts277
377s   version:  2.4.41 (typical)
377s   authors:  Shane Neph & Scott Kuehn
377s                                                                                                     
377s  USAGE: bedmap [process-flags] [overlap-option] <operation(s)...> <ref-file> [map-file]             
377s      Any input file must be sorted per the sort-bed utility.                                        
377s      The program accepts BED and Starch file formats.                                               
377s      You may use '-' for a BED file to indicate the input comes from stdin.                         
377s                                                                                                     
377s      Traverse <ref-file>, while applying <operation(s)> on qualified, overlapping elements from     
377s        <map-file>.  Output is one line for each line in <ref-file>, sent to standard output.  There 
377s        is no limit on the number of operations you can specify to compute in one bedmap call.       
377s      If <map-file> is omitted, the given file is treated as both the <ref-file> and <map-file>.     
377s        This usage is more efficient than specifying the same file twice.                            
377s      Arguments may be given in any order before the input file(s).                                  
377s                                                                                                     
377s     Process Flags:                                                                                  
377s      --------                                                                                       
377s       --chrom <chromosome>  Jump to and process data for given <chromosome> only.                   
377s       --delim <delim>       Change output delimiter from '|' to <delim> between columns (e.g. '\t').
377s       --ec                  Error check all input files (slower).                                   
377s       --faster              (advanced) Strong input assumptions are made.  Compatible with:         
377s                               --bp-ovr, --range, --fraction-both, and --exact overlap options only. 
377s       --header              Accept headers (VCF, GFF, SAM, BED, WIG) in any input file.             
377s       --help                Print this message and exit successfully.                               
377s       --min-memory          Minimize memory usage (slower).                                         
377s       --multidelim <delim>  Change delimiter of multi-value output columns from ';' to <delim>.     
377s       --prec <int>          Change the post-decimal precision of scores to <int>.  0 <= <int>.      
377s       --sci                 Use scientific notation for score outputs.                              
377s       --skip-unmapped       Print no output for a row with no mapped elements.                      
377s       --sweep-all           Ensure <map-file> is read completely (helps to prevent broken pipes).   
377s       --unmapped-val <val>  Print <val> on unmapped --echo-map* and --min/max-element* operations.  
377s                               The default is to print nothing.                                      
377s       --version             Print program information.                                              
377s                                                                                                     
377s                                                                                                     
377s     Overlap Options (At most, one may be selected.  By default, --bp-ovr 1 is used):                
377s      --------                                                                                       
377s       --bp-ovr <int>           Require <int> bp overlap between elements of input files.            
377s       --exact                  First 3 fields from <map-file> must be identical to <ref-file>'s.    
377s       --fraction-both <val>    Both --fraction-ref <val> and --fraction-map <val> must be true to   
377s                                  qualify as overlapping.  Expect 0 < val <= 1.                      
377s       --fraction-either <val>  Either --fraction-ref <val> or --fraction-map <val> must be true to  
377s                                  qualify as overlapping.  Expect 0 < val <= 1.                      
377s       --fraction-map <val>     The fraction of the element's size from <map-file> that must overlap 
377s                                  the element in <ref-file>.  Expect 0 < val <= 1.                   
377s       --fraction-ref <val>     The fraction of the element's size from <ref-file> that must overlap 
377s                                  an element in <map-file>.  Expect 0 < val <= 1.                    
377s       --range <int>            Grab <map-file> elements within <int> bp of <ref-file>'s element,    
377s                                  where 0 <= int.  --range 0 is an alias for --bp-ovr 1.             
377s                                                                                                     
377s                                                                                                     
377s     Operations:  (Any number of operations may be used any number of times.)                        
377s      ----------                                                                                     
377s       SCORE:                                                                                        
377s        <ref-file> must have at least 3 columns and <map-file> 5 columns.                            
377s                                                                                                     
377s       --cv                The result of --stdev divided by the result of --mean.
377s       --kth <val>         Generalized median. Report the value, x, such that the fraction <val>
377s                             of overlapping elements' scores from <map-file> is less than x,
377s                             and the fraction 1-<val> of scores is greater than x.  0 < val <= 1.
377s       --mad <mult=1>      The median absolute deviation of overlapping elements in <map-file>.
377s                             Multiply mad score by <mult>.  0 < mult, and mult is 1 by default.
377s       --max               The highest score from overlapping elements in <map-file>.
377s       --max-element       A (non-random) highest-scoring and overlapping element in <map-file>.
377s       --max-element-rand  A random highest-scoring and overlapping element in <map-file>.
377s       --mean              The average score from overlapping elements in <map-file>.
377s       --median            The median score from overlapping elements in <map-file>.
377s       --min               The lowest score from overlapping elements in <map-file>.
377s       --min-element       A (non-random) lowest-scoring and overlapping element in <map-file>.
377s       --min-element-rand  A random lowest-scoring and overlapping element in <map-file>.
377s       --stdev             The square root of the result of --variance.
377s       --sum               Accumulated scores from overlapping elements in <map-file>.
377s       --tmean <low> <hi>  The mean score from overlapping elements in <map-file>, after
377s                             ignoring the bottom <low> and top <hi> fractions of those scores.
377s                             0 <= low <= 1.  0 <= hi <= 1.  low+hi <= 1.
377s       --variance          The variance of scores from overlapping elements in <map-file>.
377s       --wmean             Weighted mean, scaled in proportion to the coverage of the <ref-file>
377s                             element by each overlapping <map-file> element.
377s      
377s      ----------
377s       NON-SCORE:
377s        <ref-file> must have at least 3 columns.
377s        For --echo-map-id/echo-map-id-uniq, <map-file> must have at least 4 columns.
377s        For --echo-map-score, <map-file> must have at least 5 columns.
377s        For all others, <map-file> requires at least 3 columns.
377s 
377s       --bases             The total number of overlapping bases from <map-file>.
377s       --bases-uniq        The number of distinct bases from <ref-file>'s element covered by
377s                             overlapping elements in <map-file>.
377s       --bases-uniq-f      The fraction of distinct bases from <ref-file>'s element covered by
377s                             overlapping elements in <map-file>.
377s       --count             The number of overlapping elements in <map-file>.
377s       --echo              Print each line from <ref-file>.
377s       --echo-map          List all overlapping elements from <map-file>.
377s       --echo-map-id       List IDs from all overlapping <map-file> elements.
377s       --echo-map-id-uniq  List unique IDs from overlapping <map-file> elements.
377s       --echo-map-range    Print genomic range of overlapping elements from <map-file>.
377s       --echo-map-score    List scores from overlapping <map-file> elements.
377s       --echo-map-size     List the full length of every overlapping element.
377s       --echo-overlap-size List lengths of overlaps.
377s       --echo-ref-name     Print the first 3 fields of <ref-file> using chrom:start-end format.
377s       --echo-ref-row-id   Print 'id-' followed by the line number of <ref-file>.
377s       --echo-ref-size     Print the length of each line from <ref-file>.
377s       --indicator         Print 1 if there exists an overlapping element in <map-file>, 0 otherwise.
377s 
377s 
377s [starch-starch-API- --starch_api_bedmap] - [Test 001] ...passed!
377s Missing binary [bedops-starch] for build type []
377s Writing to [/tmp/tmp.ywJwLGRxsy]
377s bedops-starch --version
377s starch
377s   binary version: 2.4.41 (typical) (creates archive version: 2.2.0)
377s Generating random intervals...
377s ./generate_random_intervals.sh /tmp/autopkgtest.9x7x0k/autopkgtest_tmp/tests/starch/data/hg38.bed 3 10000 | sort-bed - > /tmp/tmp.ywJwLGRxsy/random_intervals.bed
378s [starch-starch- --deflate_and_inflate_bzip2] - [Test 001] ...passed!
378s [starch-starch- --deflate_and_inflate_gz] - [Test 001] ...passed!
378s Removing [/tmp/tmp.ywJwLGRxsy]
378s make[1]: Leaving directory '/tmp/autopkgtest.9x7x0k/autopkgtest_tmp/tests/starch'
378s autopkgtest [23:39:22]: test run-unit-test: -----------------------]
379s autopkgtest [23:39:23]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
379s run-unit-test        PASS
379s autopkgtest [23:39:23]: @@@@@@@@@@@@@@@@@@@@ summary
379s run-unit-test        PASS
415s Creating nova instance adt-noble-ppc64el-bedops-20240308-233303-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240308.img (UUID ddb37fe7-ecfa-42b4-9389-74a2186e708a)...