0s autopkgtest [01:53:23]: starting date and time: 2024-03-22 01:53:23+0000 0s autopkgtest [01:53:23]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [01:53:23]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.52q0kkmh/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:ncbi-blast+ --apt-upgrade ruby-crb-blast --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=ncbi-blast+/2.12.0+ds-4build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-8.secgroup --name adt-noble-i386-ruby-crb-blast-20240322-015323-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 704s autopkgtest [02:05:07]: testbed dpkg architecture: amd64 704s autopkgtest [02:05:07]: testbed apt version: 2.7.12 704s autopkgtest [02:05:07]: test architecture: i386 704s autopkgtest [02:05:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 705s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 705s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 705s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 705s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3801 kB] 705s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 705s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [467 kB] 705s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [703 kB] 705s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 705s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 705s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 705s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 705s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1280 kB] 705s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4251 kB] 705s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 705s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 705s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 705s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 708s Fetched 11.3 MB in 1s (7988 kB/s) 708s Reading package lists... 710s Reading package lists... 711s Building dependency tree... 711s Reading state information... 711s Calculating upgrade... 711s The following packages will be upgraded: 711s cloud-init fonts-ubuntu-console python3-markupsafe 711s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 711s Need to get 629 kB of archives. 711s After this operation, 11.3 kB disk space will be freed. 711s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 711s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 python3-markupsafe amd64 2.1.5-1build1 [12.6 kB] 711s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 cloud-init all 24.1.2-0ubuntu1 [597 kB] 712s Preconfiguring packages ... 712s Fetched 629 kB in 0s (23.8 MB/s) 712s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 712s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 712s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 712s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_amd64.deb ... 712s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 712s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 712s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 712s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 712s Setting up cloud-init (24.1.2-0ubuntu1) ... 714s Setting up python3-markupsafe (2.1.5-1build1) ... 714s Processing triggers for man-db (2.12.0-3) ... 714s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 715s Reading package lists... 715s Building dependency tree... 715s Reading state information... 715s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 716s sh: Attempting to set up Debian/Ubuntu apt sources automatically 716s sh: Distribution appears to be Ubuntu 717s Reading package lists... 717s Building dependency tree... 717s Reading state information... 717s eatmydata is already the newest version (131-1). 717s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 717s Reading package lists... 718s Building dependency tree... 718s Reading state information... 718s dbus is already the newest version (1.14.10-4ubuntu1). 718s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 718s Reading package lists... 718s Building dependency tree... 718s Reading state information... 719s rng-tools-debian is already the newest version (2.4). 719s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 719s Reading package lists... 719s Building dependency tree... 719s Reading state information... 719s The following packages will be REMOVED: 719s cloud-init* python3-configobj* python3-debconf* 719s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 719s After this operation, 3256 kB disk space will be freed. 720s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 720s Removing cloud-init (24.1.2-0ubuntu1) ... 720s Removing python3-configobj (5.0.8-3) ... 720s Removing python3-debconf (1.5.86) ... 720s Processing triggers for man-db (2.12.0-3) ... 720s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 720s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 721s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 721s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 721s invoke-rc.d: policy-rc.d denied execution of try-restart. 721s Reading package lists... 722s Building dependency tree... 722s Reading state information... 722s linux-generic is already the newest version (6.8.0-11.11+1). 722s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 722s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 722s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 722s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 724s Reading package lists... 724s Reading package lists... 724s Building dependency tree... 724s Reading state information... 725s Calculating upgrade... 725s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 725s Reading package lists... 725s Building dependency tree... 725s Reading state information... 726s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 726s autopkgtest [02:05:29]: rebooting testbed after setup commands that affected boot 766s autopkgtest [02:06:09]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 767s autopkgtest [02:06:10]: @@@@@@@@@@@@@@@@@@@@ apt-source ruby-crb-blast 768s Get:1 http://ftpmaster.internal/ubuntu noble/universe ruby-crb-blast 0.6.9-5 (dsc) [2166 B] 768s Get:2 http://ftpmaster.internal/ubuntu noble/universe ruby-crb-blast 0.6.9-5 (tar) [37.2 kB] 768s Get:3 http://ftpmaster.internal/ubuntu noble/universe ruby-crb-blast 0.6.9-5 (diff) [5740 B] 768s gpgv: Signature made Mon Aug 21 21:53:37 2023 UTC 768s gpgv: using RSA key 8ED6C3F8BAC9DB7FC130A870F823A2729883C97C 768s gpgv: issuer "kanashiro@debian.org" 768s gpgv: Can't check signature: No public key 768s dpkg-source: warning: cannot verify inline signature for ./ruby-crb-blast_0.6.9-5.dsc: no acceptable signature found 768s autopkgtest [02:06:11]: testing package ruby-crb-blast version 0.6.9-5 768s autopkgtest [02:06:11]: build not needed 768s autopkgtest [02:06:11]: test gem2deb-test-runner: preparing testbed 771s Note, using file '/tmp/autopkgtest.iaVgqD/1-autopkgtest-satdep.dsc' to get the build dependencies 772s Reading package lists... 772s Building dependency tree... 772s Reading state information... 772s Starting pkgProblemResolver with broken count: 0 772s Starting 2 pkgProblemResolver with broken count: 0 772s Done 773s The following NEW packages will be installed: 773s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu g++ 773s g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 773s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gem2deb-test-runner help2man 773s libasan8 libatomic1 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev 773s libgcc-13-dev libgomp1 libhwasan0 libisl23 libitm1 liblsan0 libmbedcrypto7 773s libmbedtls14 libmbedx509-1 libmpc3 libnsl-dev libquadmath0 libruby 773s libruby3.1 libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 linux-libc-dev 773s ncbi-blast+ ncbi-data rake rpcsvc-proto ruby ruby-activesupport ruby-bio 773s ruby-concurrent ruby-crb-blast ruby-facade ruby-fixwhich ruby-i18n 773s ruby-net-telnet ruby-pathname2 ruby-rubygems ruby-sdbm ruby-shoulda 773s ruby-shoulda-context ruby-shoulda-matchers ruby-threach ruby-trollop 773s ruby-tzinfo ruby-webrick ruby-xmlrpc ruby-zeitwerk ruby3.1 773s rubygems-integration 773s 0 upgraded, 67 newly installed, 0 to remove and 0 not upgraded. 773s Need to get 90.9 MB of archives. 773s After this operation, 354 MB of additional disk space will be used. 773s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 773s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 773s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 773s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 773s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 773s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 773s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 773s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 773s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 773s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 773s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 773s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 773s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 773s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 773s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 773s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 773s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 773s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 773s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 773s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 773s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 773s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 773s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 773s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 773s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 773s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 773s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 773s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 773s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 773s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 773s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 773s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 773s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 773s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 773s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 rubygems-integration all 1.18 [5336 B] 773s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 ruby-net-telnet all 0.2.0-1 [13.3 kB] 773s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 ruby-webrick all 1.8.1-1 [52.3 kB] 773s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 ruby-xmlrpc all 0.3.2-2 [24.8 kB] 773s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libruby amd64 1:3.1+1 [4640 B] 773s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 ruby-sdbm amd64 1.0.0-5build3 [18.6 kB] 773s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libruby3.1 amd64 3.1.2-7ubuntu4 [5164 kB] 773s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 ruby3.1 amd64 3.1.2-7ubuntu4 [48.9 kB] 773s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 ruby-rubygems all 3.4.20-1 [238 kB] 773s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 ruby amd64 1:3.1+1 [3466 B] 773s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 rake all 13.0.6-3 [61.6 kB] 773s Get:46 http://ftpmaster.internal/ubuntu noble/universe amd64 gem2deb-test-runner amd64 2.2.2 [18.2 kB] 773s Get:47 http://ftpmaster.internal/ubuntu noble/universe amd64 help2man amd64 1.49.3 [201 kB] 773s Get:48 http://ftpmaster.internal/ubuntu noble/universe amd64 libmbedcrypto7 amd64 2.28.7-1ubuntu1 [206 kB] 773s Get:49 http://ftpmaster.internal/ubuntu noble/universe amd64 libmbedx509-1 amd64 2.28.7-1ubuntu1 [46.4 kB] 773s Get:50 http://ftpmaster.internal/ubuntu noble/universe amd64 libmbedtls14 amd64 2.28.7-1ubuntu1 [82.1 kB] 773s Get:51 http://ftpmaster.internal/ubuntu noble/universe amd64 ncbi-data all 6.1.20170106+dfsg1-10 [4395 kB] 773s Get:52 http://ftpmaster.internal/ubuntu noble/universe amd64 ncbi-blast+ amd64 2.12.0+ds-4 [12.6 MB] 773s Get:53 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-concurrent all 1.1.6+dfsg-5build3 [212 kB] 773s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-i18n all 1.14.1-1 [42.0 kB] 773s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-tzinfo all 2.0.6-1 [55.2 kB] 773s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-zeitwerk all 2.6.8-1 [36.0 kB] 773s Get:57 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-activesupport all 2:6.1.7.3+dfsg-3 [198 kB] 773s Get:58 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-bio all 2.0.5-1 [656 kB] 773s Get:59 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-trollop all 2.0-2.1 [14.9 kB] 773s Get:60 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-facade all 1.2.1-1 [8272 B] 773s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-pathname2 all 1.8.2-2 [15.0 kB] 773s Get:62 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-fixwhich all 1.0.2-2 [4328 B] 773s Get:63 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-threach all 0.2.0-2 [5364 B] 773s Get:64 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-crb-blast all 0.6.9-5 [12.4 kB] 773s Get:65 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-shoulda-context all 2.0.0-2 [16.4 kB] 773s Get:66 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-shoulda-matchers all 4.3.0-2 [72.8 kB] 773s Get:67 http://ftpmaster.internal/ubuntu noble/universe amd64 ruby-shoulda all 4.0.0-3 [5972 B] 774s Fetched 90.9 MB in 1s (123 MB/s) 774s Selecting previously unselected package libc-dev-bin. 774s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 774s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 774s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 774s Selecting previously unselected package linux-libc-dev:amd64. 774s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_amd64.deb ... 774s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 774s Selecting previously unselected package libcrypt-dev:amd64. 774s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 774s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 774s Selecting previously unselected package libtirpc-dev:amd64. 774s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 774s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 774s Selecting previously unselected package libnsl-dev:amd64. 774s Preparing to unpack .../04-libnsl-dev_1.3.0-3_amd64.deb ... 774s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 774s Selecting previously unselected package rpcsvc-proto. 774s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 774s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 774s Selecting previously unselected package libc6-dev:amd64. 774s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_amd64.deb ... 774s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 774s Selecting previously unselected package libisl23:amd64. 774s Preparing to unpack .../07-libisl23_0.26-3_amd64.deb ... 774s Unpacking libisl23:amd64 (0.26-3) ... 775s Selecting previously unselected package libmpc3:amd64. 775s Preparing to unpack .../08-libmpc3_1.3.1-1_amd64.deb ... 775s Unpacking libmpc3:amd64 (1.3.1-1) ... 775s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 775s Preparing to unpack .../09-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 775s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 775s Selecting previously unselected package cpp-13. 775s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 775s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 775s Selecting previously unselected package cpp-x86-64-linux-gnu. 775s Preparing to unpack .../11-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 775s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 775s Selecting previously unselected package cpp. 775s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 775s Unpacking cpp (4:13.2.0-7ubuntu1) ... 775s Selecting previously unselected package libcc1-0:amd64. 775s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libgomp1:amd64. 775s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libitm1:amd64. 775s Preparing to unpack .../15-libitm1_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libatomic1:amd64. 775s Preparing to unpack .../16-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libasan8:amd64. 775s Preparing to unpack .../17-libasan8_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package liblsan0:amd64. 775s Preparing to unpack .../18-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libtsan2:amd64. 775s Preparing to unpack .../19-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libubsan1:amd64. 775s Preparing to unpack .../20-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libhwasan0:amd64. 775s Preparing to unpack .../21-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libquadmath0:amd64. 775s Preparing to unpack .../22-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 775s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 775s Selecting previously unselected package libgcc-13-dev:amd64. 775s Preparing to unpack .../23-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 775s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 775s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 775s Preparing to unpack .../24-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 775s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 776s Selecting previously unselected package gcc-13. 776s Preparing to unpack .../25-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 776s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 776s Selecting previously unselected package gcc-x86-64-linux-gnu. 776s Preparing to unpack .../26-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 776s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 776s Selecting previously unselected package gcc. 776s Preparing to unpack .../27-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 776s Unpacking gcc (4:13.2.0-7ubuntu1) ... 776s Selecting previously unselected package libstdc++-13-dev:amd64. 776s Preparing to unpack .../28-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 776s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 776s Selecting previously unselected package g++-13-x86-64-linux-gnu. 776s Preparing to unpack .../29-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 776s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 776s Selecting previously unselected package g++-13. 776s Preparing to unpack .../30-g++-13_13.2.0-17ubuntu2_amd64.deb ... 776s Unpacking g++-13 (13.2.0-17ubuntu2) ... 776s Selecting previously unselected package g++-x86-64-linux-gnu. 776s Preparing to unpack .../31-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 776s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 776s Selecting previously unselected package g++. 776s Preparing to unpack .../32-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 776s Unpacking g++ (4:13.2.0-7ubuntu1) ... 776s Selecting previously unselected package build-essential. 776s Preparing to unpack .../33-build-essential_12.10ubuntu1_amd64.deb ... 776s Unpacking build-essential (12.10ubuntu1) ... 776s Selecting previously unselected package rubygems-integration. 776s Preparing to unpack .../34-rubygems-integration_1.18_all.deb ... 776s Unpacking rubygems-integration (1.18) ... 776s Selecting previously unselected package ruby-net-telnet. 776s Preparing to unpack .../35-ruby-net-telnet_0.2.0-1_all.deb ... 776s Unpacking ruby-net-telnet (0.2.0-1) ... 776s Selecting previously unselected package ruby-webrick. 776s Preparing to unpack .../36-ruby-webrick_1.8.1-1_all.deb ... 776s Unpacking ruby-webrick (1.8.1-1) ... 776s Selecting previously unselected package ruby-xmlrpc. 776s Preparing to unpack .../37-ruby-xmlrpc_0.3.2-2_all.deb ... 776s Unpacking ruby-xmlrpc (0.3.2-2) ... 776s Selecting previously unselected package libruby:amd64. 776s Preparing to unpack .../38-libruby_1%3a3.1+1_amd64.deb ... 776s Unpacking libruby:amd64 (1:3.1+1) ... 777s Selecting previously unselected package ruby-sdbm:amd64. 777s Preparing to unpack .../39-ruby-sdbm_1.0.0-5build3_amd64.deb ... 777s Unpacking ruby-sdbm:amd64 (1.0.0-5build3) ... 777s Selecting previously unselected package libruby3.1:amd64. 777s Preparing to unpack .../40-libruby3.1_3.1.2-7ubuntu4_amd64.deb ... 777s Unpacking libruby3.1:amd64 (3.1.2-7ubuntu4) ... 777s Selecting previously unselected package ruby3.1. 777s Preparing to unpack .../41-ruby3.1_3.1.2-7ubuntu4_amd64.deb ... 777s Unpacking ruby3.1 (3.1.2-7ubuntu4) ... 777s Selecting previously unselected package ruby-rubygems. 777s Preparing to unpack .../42-ruby-rubygems_3.4.20-1_all.deb ... 777s Unpacking ruby-rubygems (3.4.20-1) ... 777s Selecting previously unselected package ruby. 777s Preparing to unpack .../43-ruby_1%3a3.1+1_amd64.deb ... 777s Unpacking ruby (1:3.1+1) ... 777s Selecting previously unselected package rake. 777s Preparing to unpack .../44-rake_13.0.6-3_all.deb ... 777s Unpacking rake (13.0.6-3) ... 777s Selecting previously unselected package gem2deb-test-runner. 777s Preparing to unpack .../45-gem2deb-test-runner_2.2.2_amd64.deb ... 777s Unpacking gem2deb-test-runner (2.2.2) ... 777s Selecting previously unselected package help2man. 777s Preparing to unpack .../46-help2man_1.49.3_amd64.deb ... 777s Unpacking help2man (1.49.3) ... 777s Selecting previously unselected package libmbedcrypto7:amd64. 777s Preparing to unpack .../47-libmbedcrypto7_2.28.7-1ubuntu1_amd64.deb ... 777s Unpacking libmbedcrypto7:amd64 (2.28.7-1ubuntu1) ... 777s Selecting previously unselected package libmbedx509-1:amd64. 777s Preparing to unpack .../48-libmbedx509-1_2.28.7-1ubuntu1_amd64.deb ... 777s Unpacking libmbedx509-1:amd64 (2.28.7-1ubuntu1) ... 777s Selecting previously unselected package libmbedtls14:amd64. 777s Preparing to unpack .../49-libmbedtls14_2.28.7-1ubuntu1_amd64.deb ... 777s Unpacking libmbedtls14:amd64 (2.28.7-1ubuntu1) ... 777s Selecting previously unselected package ncbi-data. 777s Preparing to unpack .../50-ncbi-data_6.1.20170106+dfsg1-10_all.deb ... 777s Unpacking ncbi-data (6.1.20170106+dfsg1-10) ... 777s Selecting previously unselected package ncbi-blast+. 777s Preparing to unpack .../51-ncbi-blast+_2.12.0+ds-4_amd64.deb ... 777s Unpacking ncbi-blast+ (2.12.0+ds-4) ... 778s Selecting previously unselected package ruby-concurrent. 778s Preparing to unpack .../52-ruby-concurrent_1.1.6+dfsg-5build3_all.deb ... 778s Unpacking ruby-concurrent (1.1.6+dfsg-5build3) ... 778s Selecting previously unselected package ruby-i18n. 778s Preparing to unpack .../53-ruby-i18n_1.14.1-1_all.deb ... 778s Unpacking ruby-i18n (1.14.1-1) ... 778s Selecting previously unselected package ruby-tzinfo. 778s Preparing to unpack .../54-ruby-tzinfo_2.0.6-1_all.deb ... 778s Unpacking ruby-tzinfo (2.0.6-1) ... 778s Selecting previously unselected package ruby-zeitwerk. 778s Preparing to unpack .../55-ruby-zeitwerk_2.6.8-1_all.deb ... 778s Unpacking ruby-zeitwerk (2.6.8-1) ... 778s Selecting previously unselected package ruby-activesupport. 778s Preparing to unpack .../56-ruby-activesupport_2%3a6.1.7.3+dfsg-3_all.deb ... 778s Unpacking ruby-activesupport (2:6.1.7.3+dfsg-3) ... 778s Selecting previously unselected package ruby-bio. 778s Preparing to unpack .../57-ruby-bio_2.0.5-1_all.deb ... 778s Unpacking ruby-bio (2.0.5-1) ... 778s Selecting previously unselected package ruby-trollop. 778s Preparing to unpack .../58-ruby-trollop_2.0-2.1_all.deb ... 778s Unpacking ruby-trollop (2.0-2.1) ... 778s Selecting previously unselected package ruby-facade. 778s Preparing to unpack .../59-ruby-facade_1.2.1-1_all.deb ... 778s Unpacking ruby-facade (1.2.1-1) ... 778s Selecting previously unselected package ruby-pathname2. 778s Preparing to unpack .../60-ruby-pathname2_1.8.2-2_all.deb ... 778s Unpacking ruby-pathname2 (1.8.2-2) ... 778s Selecting previously unselected package ruby-fixwhich. 778s Preparing to unpack .../61-ruby-fixwhich_1.0.2-2_all.deb ... 778s Unpacking ruby-fixwhich (1.0.2-2) ... 778s Selecting previously unselected package ruby-threach. 778s Preparing to unpack .../62-ruby-threach_0.2.0-2_all.deb ... 778s Unpacking ruby-threach (0.2.0-2) ... 778s Selecting previously unselected package ruby-crb-blast. 778s Preparing to unpack .../63-ruby-crb-blast_0.6.9-5_all.deb ... 778s Unpacking ruby-crb-blast (0.6.9-5) ... 778s Selecting previously unselected package ruby-shoulda-context. 778s Preparing to unpack .../64-ruby-shoulda-context_2.0.0-2_all.deb ... 778s Unpacking ruby-shoulda-context (2.0.0-2) ... 778s Selecting previously unselected package ruby-shoulda-matchers. 778s Preparing to unpack .../65-ruby-shoulda-matchers_4.3.0-2_all.deb ... 778s Unpacking ruby-shoulda-matchers (4.3.0-2) ... 778s Selecting previously unselected package ruby-shoulda. 778s Preparing to unpack .../66-ruby-shoulda_4.0.0-3_all.deb ... 778s Unpacking ruby-shoulda (4.0.0-3) ... 778s Setting up ncbi-data (6.1.20170106+dfsg1-10) ... 778s Setting up ruby-facade (1.2.1-1) ... 778s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 778s Setting up rubygems-integration (1.18) ... 778s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 778s Setting up ruby-concurrent (1.1.6+dfsg-5build3) ... 778s Setting up help2man (1.49.3) ... 778s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 778s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 778s Setting up libmbedcrypto7:amd64 (2.28.7-1ubuntu1) ... 778s Setting up ruby-net-telnet (0.2.0-1) ... 778s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 778s Setting up libmpc3:amd64 (1.3.1-1) ... 778s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 778s Setting up ruby-i18n (1.14.1-1) ... 778s Setting up ruby-webrick (1.8.1-1) ... 778s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 778s Setting up libnsl-dev:amd64 (1.3.0-3) ... 778s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 778s Setting up ruby-pathname2 (1.8.2-2) ... 778s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 778s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 778s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 778s Setting up libisl23:amd64 (0.26-3) ... 778s Setting up libc-dev-bin (2.39-0ubuntu2) ... 778s Setting up ruby-xmlrpc (0.3.2-2) ... 778s Setting up ruby-zeitwerk (2.6.8-1) ... 778s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 778s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 778s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 778s Setting up ruby-bio (2.0.5-1) ... 778s Setting up libmbedx509-1:amd64 (2.28.7-1ubuntu1) ... 778s Setting up libmbedtls14:amd64 (2.28.7-1ubuntu1) ... 778s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 778s Setting up ruby-tzinfo (2.0.6-1) ... 778s Setting up ncbi-blast+ (2.12.0+ds-4) ... 778s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 778s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 778s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 778s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 778s Setting up cpp-13 (13.2.0-17ubuntu2) ... 778s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 778s Setting up gcc-13 (13.2.0-17ubuntu2) ... 778s Setting up cpp (4:13.2.0-7ubuntu1) ... 778s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 778s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 778s Setting up gcc (4:13.2.0-7ubuntu1) ... 778s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 778s Setting up g++-13 (13.2.0-17ubuntu2) ... 778s Setting up g++ (4:13.2.0-7ubuntu1) ... 778s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 778s Setting up build-essential (12.10ubuntu1) ... 778s Setting up ruby-rubygems (3.4.20-1) ... 778s Setting up ruby3.1 (3.1.2-7ubuntu4) ... 778s Setting up libruby:amd64 (1:3.1+1) ... 778s Setting up ruby (1:3.1+1) ... 778s Setting up ruby-threach (0.2.0-2) ... 778s Setting up rake (13.0.6-3) ... 778s Setting up ruby-sdbm:amd64 (1.0.0-5build3) ... 778s Setting up libruby3.1:amd64 (3.1.2-7ubuntu4) ... 778s Setting up ruby-fixwhich (1.0.2-2) ... 778s Setting up ruby-activesupport (2:6.1.7.3+dfsg-3) ... 778s Setting up ruby-shoulda-context (2.0.0-2) ... 778s Setting up ruby-trollop (2.0-2.1) ... 778s Setting up gem2deb-test-runner (2.2.2) ... 778s Setting up ruby-crb-blast (0.6.9-5) ... 778s Setting up ruby-shoulda-matchers (4.3.0-2) ... 778s Setting up ruby-shoulda (4.0.0-3) ... 778s Processing triggers for libc-bin (2.39-0ubuntu2) ... 778s Processing triggers for man-db (2.12.0-3) ... 780s Processing triggers for install-info (7.1-3) ... 786s Reading package lists... 787s Building dependency tree... 787s Reading state information... 787s Starting pkgProblemResolver with broken count: 0 787s Starting 2 pkgProblemResolver with broken count: 0 787s Done 787s The following NEW packages will be installed: 787s autopkgtest-satdep 787s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 787s Need to get 0 B/704 B of archives. 787s After this operation, 0 B of additional disk space will be used. 787s Get:1 /tmp/autopkgtest.iaVgqD/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [704 B] 788s Selecting previously unselected package autopkgtest-satdep. 788s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78944 files and directories currently installed.) 788s Preparing to unpack .../2-autopkgtest-satdep.deb ... 788s Unpacking autopkgtest-satdep (0) ... 788s Setting up autopkgtest-satdep (0) ... 789s (Reading database ... 78944 files and directories currently installed.) 789s Removing autopkgtest-satdep (0) ... 790s autopkgtest [02:06:33]: test gem2deb-test-runner: gem2deb-test-runner --autopkgtest --check-dependencies 2>&1 790s autopkgtest [02:06:33]: test gem2deb-test-runner: [----------------------- 790s 790s ┌──────────────────────────────────────────────────────────────────────────────┐ 790s │ Checking Rubygems dependency resolution on ruby3.1 │ 790s └──────────────────────────────────────────────────────────────────────────────┘ 790s 790s RUBYLIB=. GEM_PATH= ruby3.1 -e gem\ \"crb-blast\" 790s mv lib ./.gem2deb.lib 790s mv ./.gem2deb.lib lib 790s 790s ┌──────────────────────────────────────────────────────────────────────────────┐ 790s │ Run tests for ruby3.1 from debian/ruby-tests.rake │ 790s └──────────────────────────────────────────────────────────────────────────────┘ 790s 790s RUBYLIB=. GEM_PATH= ruby3.1 -S rake --rakelibdir /gem2deb-nonexistent -f debian/ruby-tests.rake 790s mv lib ./.gem2deb.lib 790s /usr/bin/ruby3.1 -w -I"test" /usr/lib/ruby/gems/3.1.0/gems/rake-13.0.6/lib/rake/rake_test_loader.rb "test/test_test.rb" "test/test_bin.rb" "test/test_test.rb" "test/test_test2.rb" "test/test_test3.rb" -v 790s /usr/lib/ruby/vendor_ruby/fixwhich.rb:3: warning: assigned but unused variable - e 790s /usr/lib/ruby/vendor_ruby/pathname2.rb:211: warning: method redefined; discarding old children 790s /usr/share/rubygems-integration/all/gems/facade-1.2.1/lib/facade.rb:40: warning: previous definition of children was here 790s /usr/lib/ruby/vendor_ruby/threach.rb:7: warning: `*' interpreted as argument prefix 790s /tmp/autopkgtest.iaVgqD/build.ALR/src/test/test_test3.rb:29: warning: assigned but unused variable - blaster 790s /tmp/autopkgtest.iaVgqD/build.ALR/src/test/test_test3.rb:45: warning: assigned but unused variable - dbs 790s /tmp/autopkgtest.iaVgqD/build.ALR/src/test/test_test3.rb:46: warning: assigned but unused variable - run 790s /tmp/autopkgtest.iaVgqD/build.ALR/src/test/test_test3.rb:47: warning: assigned but unused variable - load 790s Loaded suite /usr/lib/ruby/gems/3.1.0/gems/rake-13.0.6/lib/rake/rake_test_loader 790s Started 790s Test2CRBBlast: 791s test: crb-blast should add secondary hits. : .: (0.331787) 791s test: crb-blast should break input file into no more pieces than there are sequences. : .: (0.280341) 791s test: crb-blast should break input file into pieces. :.: (0.283262) 792s test: crb-blast should find reciprocals. : .: (0.390100) 792s test: crb-blast should get non reciprocal hits. : .: (0.384948) 792s test: crb-blast should load output should check if the databases exist. : .: (0.318087) 793s test: crb-blast should run blast should check if the databases exist yet. : .: (0.377144) 793s test: crb-blast should setup2 should run ok. : .: (0.346627) 793s Test3CRBBlast: 793s test: crb-blast should raise error when files don't exist. : .: (0.000891) 794s test: crb-blast should run. : .: (0.412602) 794s test: crb-blast should work for query sequences with pipes. : .: (0.248860) 794s TestBinary: 794s test: crb-blast should run binary. : .: (0.158466) 794s TestCRBBlast: 794s test: crb-blast should check if contig has reciprocal hit. : .: (0.364810) 795s test: crb-blast should determine that the target is a protein sequence. : .: (0.393869) 795s test: crb-blast should find reciprocals. : .: (0.353048) 795s test: crb-blast should get number of reciprocals. : .: (0.352989) 796s test: crb-blast should get query results. : .: (0.378881) 796s test: crb-blast should load outputs. : .: (0.334823) 796s test: crb-blast should not find fake scaffold name. : .: (0.303915) 797s test: crb-blast should output all reciprocal hits. : .: (0.297215) 797s test: crb-blast should run blast. : .: (0.336825) 797s test: crb-blast should setup should run ok. : .: (0.320673) 797s 797s Finished in 6.973339186 seconds. 797s ------------------------------------------------------------------------------- 797s 22 tests, 42 assertions, 0 failures, 0 errors, 0 pendings, 0 omissions, 0 notifications 797s 100% passed 797s ------------------------------------------------------------------------------- 797s 3.15 tests/s, 6.02 assertions/s 797s mv ./.gem2deb.lib lib 798s autopkgtest [02:06:41]: test gem2deb-test-runner: -----------------------] 798s gem2deb-test-runner PASS 798s autopkgtest [02:06:41]: test gem2deb-test-runner: - - - - - - - - - - results - - - - - - - - - - 798s autopkgtest [02:06:41]: @@@@@@@@@@@@@@@@@@@@ summary 798s gem2deb-test-runner PASS 808s Creating nova instance adt-noble-i386-ruby-crb-blast-20240322-015323-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240321.img (UUID 6f9effbc-61d8-4d0a-a7e9-883547f42ac1)...