0s autopkgtest [20:56:45]: starting date and time: 2024-03-23 20:56:45+0000 0s autopkgtest [20:56:45]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [20:56:45]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1e8b8xhd/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-cran-curl --apt-upgrade r-cran-rotl --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-curl/5.2.0+dfsg-1build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-24.secgroup --name adt-noble-i386-r-cran-rotl-20240323-205645-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 205s autopkgtest [21:00:10]: testbed dpkg architecture: amd64 205s autopkgtest [21:00:10]: testbed apt version: 2.7.12 205s autopkgtest [21:00:10]: test architecture: i386 205s autopkgtest [21:00:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 206s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 206s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [495 kB] 206s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3975 kB] 206s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 206s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 206s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [686 kB] 206s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [451 kB] 206s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 206s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 206s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 206s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 206s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1318 kB] 206s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4423 kB] 206s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 206s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [27.1 kB] 206s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [96.1 kB] 206s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 209s Fetched 11.7 MB in 2s (7211 kB/s) 210s Reading package lists... 211s Reading package lists... 212s Building dependency tree... 212s Reading state information... 212s Calculating upgrade... 212s The following packages will be upgraded: 212s libc-bin libc6 locales 212s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 212s Need to get 8176 kB of archives. 212s After this operation, 2048 B of additional disk space will be used. 212s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc6 amd64 2.39-0ubuntu6 [3262 kB] 212s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libc-bin amd64 2.39-0ubuntu6 [682 kB] 212s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 locales all 2.39-0ubuntu6 [4232 kB] 213s Preconfiguring packages ... 213s Fetched 8176 kB in 0s (80.1 MB/s) 213s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 213s Preparing to unpack .../libc6_2.39-0ubuntu6_amd64.deb ... 213s Unpacking libc6:amd64 (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 213s Setting up libc6:amd64 (2.39-0ubuntu6) ... 214s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 214s Preparing to unpack .../libc-bin_2.39-0ubuntu6_amd64.deb ... 214s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 214s Setting up libc-bin (2.39-0ubuntu6) ... 214s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 214s Preparing to unpack .../locales_2.39-0ubuntu6_all.deb ... 214s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 214s Setting up locales (2.39-0ubuntu6) ... 215s Generating locales (this might take a while)... 217s en_US.UTF-8... done 217s Generation complete. 217s Processing triggers for man-db (2.12.0-3) ... 218s Reading package lists... 218s Building dependency tree... 218s Reading state information... 219s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 219s sh: Attempting to set up Debian/Ubuntu apt sources automatically 219s sh: Distribution appears to be Ubuntu 220s Reading package lists... 220s Building dependency tree... 220s Reading state information... 221s eatmydata is already the newest version (131-1). 221s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 221s Reading package lists... 221s Building dependency tree... 221s Reading state information... 221s dbus is already the newest version (1.14.10-4ubuntu1). 221s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 221s Reading package lists... 221s Building dependency tree... 221s Reading state information... 222s rng-tools-debian is already the newest version (2.4). 222s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 222s Reading package lists... 222s Building dependency tree... 222s Reading state information... 222s The following packages will be REMOVED: 222s cloud-init* python3-configobj* python3-debconf* 223s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 223s After this operation, 3256 kB disk space will be freed. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 223s Removing cloud-init (24.1.2-0ubuntu1) ... 223s Removing python3-configobj (5.0.8-3) ... 223s Removing python3-debconf (1.5.86) ... 223s Processing triggers for man-db (2.12.0-3) ... 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 224s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 224s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 224s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 224s invoke-rc.d: policy-rc.d denied execution of try-restart. 224s Reading package lists... 225s Building dependency tree... 225s Reading state information... 225s linux-generic is already the newest version (6.8.0-11.11+1). 225s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 225s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 225s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 225s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 228s Reading package lists... 228s Reading package lists... 228s Building dependency tree... 228s Reading state information... 228s Calculating upgrade... 228s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 228s Reading package lists... 229s Building dependency tree... 229s Reading state information... 229s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 229s autopkgtest [21:00:34]: rebooting testbed after setup commands that affected boot 374s autopkgtest [21:02:59]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 375s autopkgtest [21:03:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-rotl 376s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-rotl 3.1.0-1 (dsc) [2164 B] 376s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-rotl 3.1.0-1 (tar) [514 kB] 376s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-rotl 3.1.0-1 (diff) [3616 B] 376s gpgv: Signature made Mon Jun 26 18:30:34 2023 UTC 376s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 376s gpgv: issuer "tille@debian.org" 376s gpgv: Can't check signature: No public key 376s dpkg-source: warning: cannot verify inline signature for ./r-cran-rotl_3.1.0-1.dsc: no acceptable signature found 376s autopkgtest [21:03:01]: testing package r-cran-rotl version 3.1.0-1 376s autopkgtest [21:03:01]: build not needed 379s autopkgtest [21:03:04]: test run-unit-test: preparing testbed 382s Note, using file '/tmp/autopkgtest.MnmG5x/1-autopkgtest-satdep.dsc' to get the build dependencies 382s Reading package lists... 382s Building dependency tree... 382s Reading state information... 383s Starting pkgProblemResolver with broken count: 0 383s Starting 2 pkgProblemResolver with broken count: 0 383s Done 383s The following NEW packages will be installed: 383s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 383s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-13 383s g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 383s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu libasan8 libatomic1 libblas3 383s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 383s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran5 libgomp1 383s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libisl23 libitm1 libjbig0 383s libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 liblsan0 libmpc3 libpango-1.0-0 383s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 383s libquadmath0 libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data 383s libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 383s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev littler 383s r-base-core r-cran-ape r-cran-askpass r-cran-brio r-cran-callr r-cran-cli 383s r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest 383s r-cran-evaluate r-cran-fansi r-cran-fs r-cran-glue r-cran-hms r-cran-httr 383s r-cran-jsonlite r-cran-lattice r-cran-lifecycle r-cran-littler 383s r-cran-magrittr r-cran-mime r-cran-nlme r-cran-openssl r-cran-pillar 383s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 383s r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress r-cran-ps 383s r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rentrez r-cran-rlang 383s r-cran-rncl r-cran-rotl r-cran-rprojroot r-cran-sys r-cran-testthat 383s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo r-cran-withr r-cran-xml 383s rpcsvc-proto unzip x11-common xdg-utils zip 383s 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. 383s Need to get 130 MB of archives. 383s After this operation, 369 MB of additional disk space will be used. 383s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu6 [20.4 kB] 383s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 383s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 383s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 383s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu6 [2126 kB] 383s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 383s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 383s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 383s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 383s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 383s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 383s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 383s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 383s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 383s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 383s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 383s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 383s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 383s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 383s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 383s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 383s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 383s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 383s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 383s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 383s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 383s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 384s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 384s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 384s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 384s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 384s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 384s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 384s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 384s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 384s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 384s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 384s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 384s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 384s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 384s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 384s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 384s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 384s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 384s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 384s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 384s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 384s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 384s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 384s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 384s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 384s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 384s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 384s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 384s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 384s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 384s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 384s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 384s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 384s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 384s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 384s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 384s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 384s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 384s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 384s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 384s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 384s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 384s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 384s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.14-1 [779 kB] 384s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 384s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 384s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 384s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 384s Get:75 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 384s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 384s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 384s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lattice amd64 0.22-5-1 [1342 kB] 384s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nlme amd64 3.1.164-1 [2260 kB] 384s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 384s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 384s Get:82 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-digest amd64 0.6.34-1 [186 kB] 384s Get:83 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ape amd64 5.7-1-1 [2892 kB] 384s Get:84 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 384s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 384s Get:86 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-brio amd64 1.1.4-1 [37.9 kB] 384s Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 384s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 384s Get:89 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-processx amd64 3.8.3-1 [346 kB] 384s Get:90 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-callr all 3.7.3-2 [425 kB] 384s Get:91 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 384s Get:92 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 384s Get:93 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-curl amd64 5.2.0+dfsg-1 [188 kB] 384s Get:94 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 384s Get:95 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 384s Get:96 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-evaluate all 0.23-1 [90.2 kB] 384s Get:97 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 384s Get:98 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fs amd64 1.6.3+dfsg-1 [229 kB] 384s Get:99 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 384s Get:100 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 384s Get:101 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 384s Get:102 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 384s Get:103 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 384s Get:104 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 384s Get:105 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 384s Get:106 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mime amd64 0.12-1 [35.8 kB] 384s Get:107 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-openssl amd64 2.1.1+dfsg-2 [402 kB] 384s Get:108 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 384s Get:109 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 384s Get:110 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 384s Get:111 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 384s Get:112 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 384s Get:113 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 384s Get:114 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 384s Get:115 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgload all 1.3.4-1 [207 kB] 384s Get:116 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 384s Get:117 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 384s Get:118 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 384s Get:119 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 384s Get:120 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 384s Get:121 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml amd64 3.99-0.16.1-1 [1733 kB] 384s Get:122 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rentrez all 1.2.3+dfsg-1 [119 kB] 384s Get:123 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rncl amd64 0.8.7-1 [513 kB] 384s Get:124 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rotl all 3.1.0-1 [541 kB] 384s Get:125 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 384s Get:126 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-testthat amd64 3.2.1-1 [1684 kB] 385s Preconfiguring packages ... 385s Fetched 130 MB in 1s (117 MB/s) 385s Selecting previously unselected package libc-dev-bin. 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 385s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu6_amd64.deb ... 385s Unpacking libc-dev-bin (2.39-0ubuntu6) ... 385s Selecting previously unselected package linux-libc-dev:amd64. 385s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 385s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 385s Selecting previously unselected package libcrypt-dev:amd64. 385s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 385s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 385s Selecting previously unselected package rpcsvc-proto. 385s Preparing to unpack .../003-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 385s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 385s Selecting previously unselected package libc6-dev:amd64. 385s Preparing to unpack .../004-libc6-dev_2.39-0ubuntu6_amd64.deb ... 385s Unpacking libc6-dev:amd64 (2.39-0ubuntu6) ... 385s Selecting previously unselected package libisl23:amd64. 385s Preparing to unpack .../005-libisl23_0.26-3_amd64.deb ... 385s Unpacking libisl23:amd64 (0.26-3) ... 385s Selecting previously unselected package libmpc3:amd64. 385s Preparing to unpack .../006-libmpc3_1.3.1-1_amd64.deb ... 385s Unpacking libmpc3:amd64 (1.3.1-1) ... 385s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 385s Preparing to unpack .../007-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 385s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 386s Selecting previously unselected package cpp-13. 386s Preparing to unpack .../008-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 386s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 386s Selecting previously unselected package cpp-x86-64-linux-gnu. 386s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 386s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 386s Selecting previously unselected package cpp. 386s Preparing to unpack .../010-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 386s Unpacking cpp (4:13.2.0-7ubuntu1) ... 386s Selecting previously unselected package libcc1-0:amd64. 386s Preparing to unpack .../011-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libgomp1:amd64. 386s Preparing to unpack .../012-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libitm1:amd64. 386s Preparing to unpack .../013-libitm1_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libatomic1:amd64. 386s Preparing to unpack .../014-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libasan8:amd64. 386s Preparing to unpack .../015-libasan8_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package liblsan0:amd64. 386s Preparing to unpack .../016-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libtsan2:amd64. 386s Preparing to unpack .../017-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libubsan1:amd64. 386s Preparing to unpack .../018-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libhwasan0:amd64. 386s Preparing to unpack .../019-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libquadmath0:amd64. 386s Preparing to unpack .../020-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 386s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 386s Selecting previously unselected package libgcc-13-dev:amd64. 386s Preparing to unpack .../021-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 386s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 386s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 386s Preparing to unpack .../022-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 386s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package gcc-13. 387s Preparing to unpack .../023-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 387s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package gcc-x86-64-linux-gnu. 387s Preparing to unpack .../024-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 387s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 387s Selecting previously unselected package gcc. 387s Preparing to unpack .../025-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 387s Unpacking gcc (4:13.2.0-7ubuntu1) ... 387s Selecting previously unselected package libstdc++-13-dev:amd64. 387s Preparing to unpack .../026-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 387s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package g++-13-x86-64-linux-gnu. 387s Preparing to unpack .../027-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 387s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package g++-13. 387s Preparing to unpack .../028-g++-13_13.2.0-17ubuntu2_amd64.deb ... 387s Unpacking g++-13 (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package g++-x86-64-linux-gnu. 387s Preparing to unpack .../029-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 387s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 387s Selecting previously unselected package g++. 387s Preparing to unpack .../030-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 387s Unpacking g++ (4:13.2.0-7ubuntu1) ... 387s Selecting previously unselected package build-essential. 387s Preparing to unpack .../031-build-essential_12.10ubuntu1_amd64.deb ... 387s Unpacking build-essential (12.10ubuntu1) ... 387s Selecting previously unselected package fonts-dejavu-mono. 387s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8_all.deb ... 387s Unpacking fonts-dejavu-mono (2.37-8) ... 387s Selecting previously unselected package fonts-dejavu-core. 387s Preparing to unpack .../033-fonts-dejavu-core_2.37-8_all.deb ... 387s Unpacking fonts-dejavu-core (2.37-8) ... 387s Selecting previously unselected package fontconfig-config. 387s Preparing to unpack .../034-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 388s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 388s Selecting previously unselected package libfontconfig1:amd64. 388s Preparing to unpack .../035-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 388s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 388s Selecting previously unselected package fontconfig. 388s Preparing to unpack .../036-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 388s Unpacking fontconfig (2.15.0-1ubuntu1) ... 388s Selecting previously unselected package libblas3:amd64. 388s Preparing to unpack .../037-libblas3_3.12.0-3_amd64.deb ... 388s Unpacking libblas3:amd64 (3.12.0-3) ... 388s Selecting previously unselected package libpixman-1-0:amd64. 388s Preparing to unpack .../038-libpixman-1-0_0.42.2-1_amd64.deb ... 388s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 388s Selecting previously unselected package libxcb-render0:amd64. 388s Preparing to unpack .../039-libxcb-render0_1.15-1_amd64.deb ... 388s Unpacking libxcb-render0:amd64 (1.15-1) ... 388s Selecting previously unselected package libxcb-shm0:amd64. 388s Preparing to unpack .../040-libxcb-shm0_1.15-1_amd64.deb ... 388s Unpacking libxcb-shm0:amd64 (1.15-1) ... 388s Selecting previously unselected package libxrender1:amd64. 388s Preparing to unpack .../041-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 388s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 388s Selecting previously unselected package libcairo2:amd64. 388s Preparing to unpack .../042-libcairo2_1.18.0-1_amd64.deb ... 388s Unpacking libcairo2:amd64 (1.18.0-1) ... 388s Selecting previously unselected package libdatrie1:amd64. 388s Preparing to unpack .../043-libdatrie1_0.2.13-3_amd64.deb ... 388s Unpacking libdatrie1:amd64 (0.2.13-3) ... 388s Selecting previously unselected package libdeflate0:amd64. 388s Preparing to unpack .../044-libdeflate0_1.19-1_amd64.deb ... 388s Unpacking libdeflate0:amd64 (1.19-1) ... 388s Selecting previously unselected package libgfortran5:amd64. 388s Preparing to unpack .../045-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 388s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libgraphite2-3:amd64. 388s Preparing to unpack .../046-libgraphite2-3_1.3.14-2_amd64.deb ... 388s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 388s Selecting previously unselected package libharfbuzz0b:amd64. 388s Preparing to unpack .../047-libharfbuzz0b_8.3.0-2_amd64.deb ... 388s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 388s Selecting previously unselected package x11-common. 388s Preparing to unpack .../048-x11-common_1%3a7.7+23ubuntu2_all.deb ... 388s Unpacking x11-common (1:7.7+23ubuntu2) ... 388s Selecting previously unselected package libice6:amd64. 388s Preparing to unpack .../049-libice6_2%3a1.0.10-1build2_amd64.deb ... 388s Unpacking libice6:amd64 (2:1.0.10-1build2) ... 388s Selecting previously unselected package libjpeg-turbo8:amd64. 388s Preparing to unpack .../050-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 388s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 388s Selecting previously unselected package libjpeg8:amd64. 388s Preparing to unpack .../051-libjpeg8_8c-2ubuntu11_amd64.deb ... 388s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 388s Selecting previously unselected package liblapack3:amd64. 388s Preparing to unpack .../052-liblapack3_3.12.0-3_amd64.deb ... 388s Unpacking liblapack3:amd64 (3.12.0-3) ... 388s Selecting previously unselected package liblerc4:amd64. 388s Preparing to unpack .../053-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 388s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 388s Selecting previously unselected package libthai-data. 388s Preparing to unpack .../054-libthai-data_0.1.29-2_all.deb ... 388s Unpacking libthai-data (0.1.29-2) ... 388s Selecting previously unselected package libthai0:amd64. 388s Preparing to unpack .../055-libthai0_0.1.29-2_amd64.deb ... 388s Unpacking libthai0:amd64 (0.1.29-2) ... 388s Selecting previously unselected package libpango-1.0-0:amd64. 388s Preparing to unpack .../056-libpango-1.0-0_1.51.0+ds-4_amd64.deb ... 388s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ... 389s Selecting previously unselected package libpangoft2-1.0-0:amd64. 389s Preparing to unpack .../057-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ... 389s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 389s Selecting previously unselected package libpangocairo-1.0-0:amd64. 389s Preparing to unpack .../058-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ... 389s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 389s Selecting previously unselected package libpaper1:amd64. 389s Preparing to unpack .../059-libpaper1_1.1.29_amd64.deb ... 389s Unpacking libpaper1:amd64 (1.1.29) ... 389s Selecting previously unselected package libpaper-utils. 389s Preparing to unpack .../060-libpaper-utils_1.1.29_amd64.deb ... 389s Unpacking libpaper-utils (1.1.29) ... 389s Selecting previously unselected package libsharpyuv0:amd64. 389s Preparing to unpack .../061-libsharpyuv0_1.3.2-0.4_amd64.deb ... 389s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ... 389s Selecting previously unselected package libsm6:amd64. 389s Preparing to unpack .../062-libsm6_2%3a1.2.3-1build2_amd64.deb ... 389s Unpacking libsm6:amd64 (2:1.2.3-1build2) ... 389s Selecting previously unselected package libtcl8.6:amd64. 389s Preparing to unpack .../063-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... 389s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... 389s Selecting previously unselected package libjbig0:amd64. 389s Preparing to unpack .../064-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 389s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 389s Selecting previously unselected package libwebp7:amd64. 389s Preparing to unpack .../065-libwebp7_1.3.2-0.4_amd64.deb ... 389s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 389s Selecting previously unselected package libtiff6:amd64. 389s Preparing to unpack .../066-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 389s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 389s Selecting previously unselected package libxft2:amd64. 389s Preparing to unpack .../067-libxft2_2.3.6-1_amd64.deb ... 389s Unpacking libxft2:amd64 (2.3.6-1) ... 389s Selecting previously unselected package libxss1:amd64. 389s Preparing to unpack .../068-libxss1_1%3a1.2.3-1build2_amd64.deb ... 389s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 389s Selecting previously unselected package libtk8.6:amd64. 389s Preparing to unpack .../069-libtk8.6_8.6.14-1_amd64.deb ... 389s Unpacking libtk8.6:amd64 (8.6.14-1) ... 389s Selecting previously unselected package libxt6:amd64. 389s Preparing to unpack .../070-libxt6_1%3a1.2.1-1.1_amd64.deb ... 389s Unpacking libxt6:amd64 (1:1.2.1-1.1) ... 389s Selecting previously unselected package zip. 389s Preparing to unpack .../071-zip_3.0-13_amd64.deb ... 389s Unpacking zip (3.0-13) ... 389s Selecting previously unselected package unzip. 389s Preparing to unpack .../072-unzip_6.0-28ubuntu3_amd64.deb ... 389s Unpacking unzip (6.0-28ubuntu3) ... 389s Selecting previously unselected package xdg-utils. 389s Preparing to unpack .../073-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 389s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 389s Selecting previously unselected package r-base-core. 389s Preparing to unpack .../074-r-base-core_4.3.2-1build1_amd64.deb ... 389s Unpacking r-base-core (4.3.2-1build1) ... 389s Selecting previously unselected package r-cran-littler. 389s Preparing to unpack .../075-r-cran-littler_0.3.19-1_amd64.deb ... 389s Unpacking r-cran-littler (0.3.19-1) ... 390s Selecting previously unselected package littler. 390s Preparing to unpack .../076-littler_0.3.19-1_all.deb ... 390s Unpacking littler (0.3.19-1) ... 390s Selecting previously unselected package r-cran-lattice. 390s Preparing to unpack .../077-r-cran-lattice_0.22-5-1_amd64.deb ... 390s Unpacking r-cran-lattice (0.22-5-1) ... 390s Selecting previously unselected package r-cran-nlme. 390s Preparing to unpack .../078-r-cran-nlme_3.1.164-1_amd64.deb ... 390s Unpacking r-cran-nlme (3.1.164-1) ... 390s Selecting previously unselected package r-cran-pkgkitten. 390s Preparing to unpack .../079-r-cran-pkgkitten_0.2.3-1_all.deb ... 390s Unpacking r-cran-pkgkitten (0.2.3-1) ... 390s Selecting previously unselected package r-cran-rcpp. 390s Preparing to unpack .../080-r-cran-rcpp_1.0.12-1_amd64.deb ... 390s Unpacking r-cran-rcpp (1.0.12-1) ... 390s Selecting previously unselected package r-cran-digest. 390s Preparing to unpack .../081-r-cran-digest_0.6.34-1_amd64.deb ... 390s Unpacking r-cran-digest (0.6.34-1) ... 390s Selecting previously unselected package r-cran-ape. 390s Preparing to unpack .../082-r-cran-ape_5.7-1-1_amd64.deb ... 390s Unpacking r-cran-ape (5.7-1-1) ... 390s Selecting previously unselected package r-cran-sys. 390s Preparing to unpack .../083-r-cran-sys_3.4.2-1_amd64.deb ... 390s Unpacking r-cran-sys (3.4.2-1) ... 390s Selecting previously unselected package r-cran-askpass. 390s Preparing to unpack .../084-r-cran-askpass_1.2.0-1_amd64.deb ... 390s Unpacking r-cran-askpass (1.2.0-1) ... 390s Selecting previously unselected package r-cran-brio. 390s Preparing to unpack .../085-r-cran-brio_1.1.4-1_amd64.deb ... 390s Unpacking r-cran-brio (1.1.4-1) ... 390s Selecting previously unselected package r-cran-ps. 390s Preparing to unpack .../086-r-cran-ps_1.7.6-1_amd64.deb ... 390s Unpacking r-cran-ps (1.7.6-1) ... 390s Selecting previously unselected package r-cran-r6. 390s Preparing to unpack .../087-r-cran-r6_2.5.1-1_all.deb ... 390s Unpacking r-cran-r6 (2.5.1-1) ... 390s Selecting previously unselected package r-cran-processx. 390s Preparing to unpack .../088-r-cran-processx_3.8.3-1_amd64.deb ... 390s Unpacking r-cran-processx (3.8.3-1) ... 390s Selecting previously unselected package r-cran-callr. 390s Preparing to unpack .../089-r-cran-callr_3.7.3-2_all.deb ... 390s Unpacking r-cran-callr (3.7.3-2) ... 390s Selecting previously unselected package r-cran-cli. 390s Preparing to unpack .../090-r-cran-cli_3.6.2-1_amd64.deb ... 390s Unpacking r-cran-cli (3.6.2-1) ... 390s Selecting previously unselected package r-cran-crayon. 390s Preparing to unpack .../091-r-cran-crayon_1.5.2-1_all.deb ... 390s Unpacking r-cran-crayon (1.5.2-1) ... 390s Selecting previously unselected package r-cran-curl. 390s Preparing to unpack .../092-r-cran-curl_5.2.0+dfsg-1_amd64.deb ... 390s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 390s Selecting previously unselected package r-cran-desc. 390s Preparing to unpack .../093-r-cran-desc_1.4.3-1_all.deb ... 390s Unpacking r-cran-desc (1.4.3-1) ... 390s Selecting previously unselected package r-cran-diffobj. 390s Preparing to unpack .../094-r-cran-diffobj_0.3.5-1_amd64.deb ... 390s Unpacking r-cran-diffobj (0.3.5-1) ... 390s Selecting previously unselected package r-cran-evaluate. 390s Preparing to unpack .../095-r-cran-evaluate_0.23-1_all.deb ... 390s Unpacking r-cran-evaluate (0.23-1) ... 390s Selecting previously unselected package r-cran-fansi. 390s Preparing to unpack .../096-r-cran-fansi_1.0.5-1_amd64.deb ... 390s Unpacking r-cran-fansi (1.0.5-1) ... 390s Selecting previously unselected package r-cran-fs. 390s Preparing to unpack .../097-r-cran-fs_1.6.3+dfsg-1_amd64.deb ... 390s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 391s Selecting previously unselected package r-cran-glue. 391s Preparing to unpack .../098-r-cran-glue_1.7.0-1_amd64.deb ... 391s Unpacking r-cran-glue (1.7.0-1) ... 391s Selecting previously unselected package r-cran-rlang. 391s Preparing to unpack .../099-r-cran-rlang_1.1.3-1_amd64.deb ... 391s Unpacking r-cran-rlang (1.1.3-1) ... 391s Selecting previously unselected package r-cran-lifecycle. 391s Preparing to unpack .../100-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 391s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 391s Selecting previously unselected package r-cran-pkgconfig. 391s Preparing to unpack .../101-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 391s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 391s Selecting previously unselected package r-cran-vctrs. 391s Preparing to unpack .../102-r-cran-vctrs_0.6.5-1_amd64.deb ... 391s Unpacking r-cran-vctrs (0.6.5-1) ... 391s Selecting previously unselected package r-cran-hms. 391s Preparing to unpack .../103-r-cran-hms_1.1.3-1_all.deb ... 391s Unpacking r-cran-hms (1.1.3-1) ... 391s Selecting previously unselected package r-cran-jsonlite. 391s Preparing to unpack .../104-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 391s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 391s Selecting previously unselected package r-cran-mime. 391s Preparing to unpack .../105-r-cran-mime_0.12-1_amd64.deb ... 391s Unpacking r-cran-mime (0.12-1) ... 391s Selecting previously unselected package r-cran-openssl. 391s Preparing to unpack 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unselected package r-cran-rprojroot. 391s Preparing to unpack .../112-r-cran-rprojroot_2.0.4-1_all.deb ... 391s Unpacking r-cran-rprojroot (2.0.4-1) ... 391s Selecting previously unselected package r-cran-withr. 391s Preparing to unpack .../113-r-cran-withr_2.5.0-1_all.deb ... 391s Unpacking r-cran-withr (2.5.0-1) ... 391s Selecting previously unselected package r-cran-pkgload. 391s Preparing to unpack .../114-r-cran-pkgload_1.3.4-1_all.deb ... 391s Unpacking r-cran-pkgload (1.3.4-1) ... 391s Selecting previously unselected package r-cran-praise. 391s Preparing to unpack .../115-r-cran-praise_1.0.0-4build1_all.deb ... 391s Unpacking r-cran-praise (1.0.0-4build1) ... 391s Selecting previously unselected package r-cran-prettyunits. 391s Preparing to unpack .../116-r-cran-prettyunits_1.2.0-1_all.deb ... 391s Unpacking r-cran-prettyunits (1.2.0-1) ... 391s Selecting previously unselected package r-cran-progress. 391s Preparing to unpack .../117-r-cran-progress_1.2.3-1_all.deb ... 391s 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Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libwebp7:amd64 (1.3.2-0.4) ... 392s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 392s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libharfbuzz0b:amd64 (8.3.0-2) ... 392s Setting up libthai-data (0.1.29-2) ... 392s Setting up libxss1:amd64 (1:1.2.3-1build2) ... 392s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libisl23:amd64 (0.26-3) ... 392s Setting up libc-dev-bin (2.39-0ubuntu6) ... 392s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 392s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 392s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 392s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 392s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 392s Setting up libice6:amd64 (2:1.0.10-1build2) ... 392s Setting up liblapack3:amd64 (3.12.0-3) ... 392s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 392s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 392s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 393s Setting up libthai0:amd64 (0.1.29-2) ... 393s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 393s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 393s Setting up libc6-dev:amd64 (2.39-0ubuntu6) ... 393s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 393s Setting up libsm6:amd64 (2:1.2.3-1build2) ... 393s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 393s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 393s Setting up fontconfig (2.15.0-1ubuntu1) ... 395s Regenerating fonts cache... done. 395s Setting up libxft2:amd64 (2.3.6-1) ... 395s Setting up cpp-13 (13.2.0-17ubuntu2) ... 395s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 395s Setting up libtk8.6:amd64 (8.6.14-1) ... 395s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ... 395s Setting up libcairo2:amd64 (1.18.0-1) ... 395s Setting up gcc-13 (13.2.0-17ubuntu2) ... 395s Setting up libxt6:amd64 (1:1.2.1-1.1) ... 395s Setting up cpp (4:13.2.0-7ubuntu1) ... 395s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 395s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 395s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 395s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 395s Setting up gcc (4:13.2.0-7ubuntu1) ... 395s Setting up r-base-core (4.3.2-1build1) ... 395s 395s Creating config file /etc/R/Renviron with new version 395s Setting up r-cran-crayon (1.5.2-1) ... 395s Setting up r-cran-lattice (0.22-5-1) ... 395s Setting up r-cran-ps (1.7.6-1) ... 395s Setting up r-cran-nlme (3.1.164-1) ... 395s Setting up r-cran-xml (3.99-0.16.1-1) ... 395s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 395s Setting up r-cran-r6 (2.5.1-1) ... 395s Setting up r-cran-pkgkitten (0.2.3-1) ... 395s Setting up r-cran-magrittr (2.0.3-1) ... 395s Setting up r-cran-littler (0.3.19-1) ... 395s Setting up r-cran-fs (1.6.3+dfsg-1) ... 395s Setting up r-cran-rcpp (1.0.12-1) ... 395s Setting up r-cran-curl (5.2.0+dfsg-1) ... 395s Setting up g++-13 (13.2.0-17ubuntu2) ... 395s Setting up r-cran-brio (1.1.4-1) ... 395s Setting up r-cran-diffobj (0.3.5-1) ... 395s Setting up r-cran-rlang (1.1.3-1) ... 395s Setting up littler (0.3.19-1) ... 395s Setting up r-cran-sys (3.4.2-1) ... 395s Setting up r-cran-withr (2.5.0-1) ... 395s Setting up r-cran-processx (3.8.3-1) ... 395s Setting up r-cran-mime (0.12-1) ... 395s Setting up r-cran-praise (1.0.0-4build1) ... 395s Setting up r-cran-digest (0.6.34-1) ... 395s Setting up r-cran-ape (5.7-1-1) ... 395s Setting up r-cran-evaluate (0.23-1) ... 395s Setting up r-cran-prettyunits (1.2.0-1) ... 395s Setting up r-cran-fansi (1.0.5-1) ... 395s Setting up r-cran-glue (1.7.0-1) ... 395s Setting up r-cran-cli (3.6.2-1) ... 395s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 395s Setting up r-cran-rprojroot (2.0.4-1) ... 395s Setting up r-cran-askpass (1.2.0-1) ... 395s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 395s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 395s Setting up r-cran-utf8 (1.2.4-1) ... 395s Setting up g++ (4:13.2.0-7ubuntu1) ... 395s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 395s Setting up build-essential (12.10ubuntu1) ... 395s Setting up r-cran-vctrs (0.6.5-1) ... 395s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 395s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 395s Setting up r-cran-callr (3.7.3-2) ... 395s Setting up r-cran-desc (1.4.3-1) ... 395s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 395s Setting up r-cran-httr (1.4.7+dfsg-1) ... 395s Setting up r-cran-hms (1.1.3-1) ... 395s Setting up r-cran-pkgbuild (1.4.3-1) ... 395s Setting up r-cran-progress (1.2.3-1) ... 395s Setting up r-cran-pkgload (1.3.4-1) ... 395s Setting up r-cran-rncl (0.8.7-1) ... 395s Setting up r-cran-rentrez (1.2.3+dfsg-1) ... 395s Setting up r-cran-rematch2 (2.1.2-2build1) ... 395s Setting up r-cran-waldo (0.5.2-1build1) ... 395s Setting up r-cran-rotl (3.1.0-1) ... 395s Setting up r-cran-testthat (3.2.1-1) ... 395s Processing triggers for libc-bin (2.39-0ubuntu6) ... 395s Processing triggers for man-db (2.12.0-3) ... 397s Processing triggers for install-info (7.1-3) ... 399s Reading package lists... 400s Building dependency tree... 400s Reading state information... 400s Starting pkgProblemResolver with broken count: 0 400s Starting 2 pkgProblemResolver with broken count: 0 400s Done 401s The following NEW packages will be installed: 401s autopkgtest-satdep 401s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 401s Need to get 0 B/700 B of archives. 401s After this operation, 0 B of additional disk space will be used. 401s Get:1 /tmp/autopkgtest.MnmG5x/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B] 401s Selecting previously unselected package autopkgtest-satdep. 401s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81827 files and directories currently installed.) 401s Preparing to unpack .../2-autopkgtest-satdep.deb ... 401s Unpacking autopkgtest-satdep (0) ... 401s Setting up autopkgtest-satdep (0) ... 403s (Reading database ... 81827 files and directories currently installed.) 403s Removing autopkgtest-satdep (0) ... 403s autopkgtest [21:03:28]: test run-unit-test: [----------------------- 403s 403s R version 4.3.2 (2023-10-31) -- "Eye Holes" 403s Copyright (C) 2023 The R Foundation for Statistical Computing 403s Platform: x86_64-pc-linux-gnu (64-bit) 403s 403s R is free software and comes with ABSOLUTELY NO WARRANTY. 403s You are welcome to redistribute it under certain conditions. 403s Type 'license()' or 'licence()' for distribution details. 403s 403s R is a collaborative project with many contributors. 403s Type 'contributors()' for more information and 403s 'citation()' on how to cite R or R packages in publications. 403s 403s Type 'demo()' for some demos, 'help()' for on-line help, or 403s 'help.start()' for an HTML browser interface to help. 403s Type 'q()' to quit R. 403s 403s > ### 403s > library(testthat) 403s > test_check("rotl") 403s Loading required package: rotl 405s [ FAIL 0 | WARN 0 | SKIP 206 | PASS 37 ] 405s 405s == Skipped tests (206) ========================================================= 407s * On CRAN (206): 'test-api-studies.R:9:3', 'test-api-studies.R:17:3', 407s 'test-api-studies.R:25:3', 'test-api-studies.R:33:3', 407s 'test-api-studies.R:44:3', 'test-api-studies.R:52:3', 407s 'test-api-studies.R:65:3', 'test-api-studies.R:73:3', 407s 'test-api-studies.R:81:3', 'test-api-studies.R:89:3', 407s 'test-api-studies.R:97:3', 'test-api-studies.R:105:3', 407s 'test-api-studies.R:113:3', 'test-api-studies.R:122:3', 407s 'test-api-studies.R:135:3', 'test-api-studies.R:143:3', 407s 'test-api-studies.R:156:3', 'test-api-studies.R:164:3', 407s 'test-api-studies.R:172:3', 'test-api-studies.R:180:3', 407s 'test-api-studies.R:188:3', 'test-api-studies.R:201:3', 407s 'test-api-studies.R:209:3', 'test-api-studies.R:217:3', 407s 'test-api-studies.R:225:3', 'test-api-studies.R:233:3', 407s 'test-api-studies.R:241:3', 'test-api-studies.R:249:3', 407s 'test-api-taxonomy.R:10:3', 'test-api-taxonomy.R:18:3', 407s 'test-api-taxonomy.R:26:3', 'test-api-taxonomy.R:34:3', 407s 'test-api-taxonomy.R:50:3', 'test-api-taxonomy.R:72:3', 407s 'test-api-taxonomy.R:80:3', 'test-api-taxonomy.R:88:3', 407s 'test-api-taxonomy.R:102:3', 'test-api-taxonomy.R:110:3', 407s 'test-api-tnrs.R:9:3', 'test-api-tnrs.R:17:3', 'test-api-tnrs.R:25:3', 407s 'test-api-tnrs.R:33:3', 'test-api-tnrs.R:41:3', 'test-api-tnrs.R:49:3', 407s 'test-api-tnrs.R:58:3', 'test-api-tnrs.R:71:3', 'test-api-tnrs.R:79:3', 407s 'test-api-tol.R:8:3', 'test-api-tol.R:20:3', 'test-api-tol.R:32:3', 407s 'test-api-tol.R:44:3', 'test-api-tol.R:52:3', 'test-api-tol.R:64:3', 407s 'test-api-tol.R:72:3', 'test-api-tol.R:80:3', 'test-base.R:4:3', 407s 'test-base.R:10:3', 'test-base.R:16:3', 'test-deduplicate_labels.R:42:3', 407s 'test-external.R:9:3', 'test-external.R:15:3', 'test-external.R:25:3', 407s 'test-external.R:35:3', 'test-match_names.R:25:3', 'test-match_names.R:33:3', 407s 'test-match_names.R:44:3', 'test-match_names.R:55:3', 407s 'test-match_names.R:66:3', 'test-match_names.R:74:3', 407s 'test-match_names.R:82:3', 'test-match_names.R:90:3', 407s 'test-match_names.R:106:3', 'test-match_names.R:118:3', 407s 'test-match_names.R:126:3', 'test-match_names.R:134:3', 407s 'test-match_names.R:143:3', 'test-match_names.R:167:3', 407s 'test-match_names.R:173:3', 'test-match_names.R:179:3', 407s 'test-match_names.R:187:3', 'test-match_names.R:194:3', 407s 'test-match_names.R:200:3', 'test-match_names.R:224:3', 407s 'test-match_names.R:235:3', 'test-match_names.R:241:3', 407s 'test-match_names.R:248:3', 'test-match_names.R:256:3', 407s 'test-match_names.R:265:3', 'test-match_names.R:276:3', 407s 'test-match_names.R:284:3', 'test-match_names.R:293:3', 407s 'test-match_names.R:311:3', 'test-match_names.R:319:3', 407s 'test-match_names.R:331:3', 'test-match_names.R:349:3', 407s 'test-match_names.R:360:3', 'test-match_names.R:374:3', 407s 'test-match_names.R:386:3', 'test-match_names.R:407:3', 407s 'test-match_names.R:417:3', 'test-match_names.R:427:3', 407s 'test-match_names.R:437:3', 'test-match_names.R:462:3', 407s 'test-match_names.R:471:3', 'test-match_names.R:478:3', 407s 'test-match_names.R:485:3', 'test-taxonomy.R:8:3', 'test-taxonomy.R:14:3', 407s 'test-taxonomy.R:25:3', 'test-taxonomy.R:33:3', 'test-taxonomy.R:40:3', 407s 'test-taxonomy.R:46:3', 'test-taxonomy.R:53:3', 'test-taxonomy.R:64:3', 407s 'test-taxonomy.R:83:3', 'test-taxonomy.R:102:3', 'test-taxonomy.R:119:3', 407s 'test-taxonomy.R:138:3', 'test-taxonomy.R:157:3', 'test-taxonomy.R:170:3', 407s 'test-taxonomy.R:178:3', 'test-taxonomy.R:186:3', 'test-taxonomy.R:194:3', 407s 'test-taxonomy.R:202:3', 'test-taxonomy.R:210:3', 'test-taxonomy.R:220:3', 407s 'test-taxonomy.R:229:3', 'test-taxonomy.R:243:3', 'test-taxonomy.R:250:3', 407s 'test-taxonomy.R:258:3', 'test-taxonomy.R:266:3', 'test-taxonomy.R:272:3', 407s 'test-taxonomy.R:278:3', 'test-taxonomy.R:287:3', 'test-taxonomy.R:306:3', 407s 'test-taxonomy.R:312:3', 'test-taxonomy.R:320:3', 'test-taxonomy.R:328:3', 407s 'test-taxonomy.R:337:3', 'test-taxonomy.R:349:3', 'test-taxonomy.R:369:3', 407s 'test-taxonomy.R:381:3', 'test-taxonomy.R:395:3', 'test-taxonomy.R:403:3', 407s 'test-taxonomy.R:410:3', 'test-taxonomy.R:418:3', 'test-taxonomy.R:429:3', 407s 'test-taxonomy.R:437:3', 'test-taxonomy.R:445:3', 'test-taxonomy.R:453:3', 407s 'test-taxonomy.R:470:3', 'test-tnrs.R:8:3', 'test-tnrs.R:16:3', 407s 'test-tnrs.R:24:3', 'test-tnrs.R:32:3', 'test-tnrs.R:38:3', 407s 'test-tnrs.R:47:3', 'test-tnrs.R:67:3', 'test-tnrs.R:78:3', 407s 'test-tol.R:12:3', 'test-tol.R:40:3', 'test-tol.R:49:3', 'test-tol.R:59:3', 407s 'test-tol.R:69:3', 'test-tol.R:79:3', 'test-tol.R:91:3', 'test-tol.R:104:3', 407s 'test-tol.R:117:3', 'test-tol.R:125:3', 'test-tol.R:133:3', 407s 'test-tol.R:147:3', 'test-tol.R:152:3', 'test-tol.R:160:3', 407s 'test-tol.R:168:3', 'test-tol.R:176:3', 'test-tol.R:191:3', 407s 'test-tol.R:199:3', 'test-tol.R:211:3', 'test-tol.R:230:3', 407s 'test-tol.R:238:3', 'test-tol.R:250:3', 'test-tol.R:287:3', 407s 'test-tol.R:327:3', 'test-tol.R:335:3', 'test-tol.R:342:3', 407s 'test-tol.R:350:3', 'test-tol.R:361:3', 'test-tol.R:369:3', 407s 'test-tol.R:377:3', 'test-tol.R:390:3', 'test-tol.R:408:3', 407s 'test-tol.R:422:3', 'test-tol.R:431:3', 'test-tol.R:441:3', 407s 'test-tol.R:451:3', 'test-tol.R:461:3', 'test-tol.R:472:3', 407s 'test-tol.R:479:3', 'test-tol.R:492:3', 'test-tol.R:509:3', 407s 'test-tol.R:517:3', 'test-tol.R:524:3', 'test-tol.R:532:3', 407s 'test-tol.R:543:3', 'test-tol.R:551:3', 'test-tol.R:559:3' 407s 407s [ FAIL 0 | WARN 0 | SKIP 206 | PASS 37 ] 407s > 408s autopkgtest [21:03:33]: test run-unit-test: -----------------------] 408s autopkgtest [21:03:33]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 408s run-unit-test PASS 408s autopkgtest [21:03:33]: test pkg-r-autopkgtest: preparing testbed 411s Note, using file '/tmp/autopkgtest.MnmG5x/3-autopkgtest-satdep.dsc' to get the build dependencies 411s Reading package lists... 411s Building dependency tree... 411s Reading state information... 411s Starting pkgProblemResolver with broken count: 0 411s Starting 2 pkgProblemResolver with broken count: 0 411s Done 412s The following NEW packages will be installed: 412s dctrl-tools fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 412s gfortran gfortran-13 gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu 412s icu-devtools javascript-common libblas-dev libbz2-dev libgfortran-13-dev 412s libicu-dev libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjs-bootstrap 412s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 412s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 412s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 412s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 412s liblapack-dev liblua5.4-0 liblzma-dev libncurses-dev libpcre2-16-0 412s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev 412s libreadline-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 412s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 412s r-cran-ade4 r-cran-base64enc r-cran-bslib r-cran-cachem r-cran-cellranger 412s r-cran-commonmark r-cran-cpp11 r-cran-dplyr r-cran-ellipsis r-cran-fastmap 412s r-cran-fontawesome r-cran-generics r-cran-highr r-cran-htmltools 412s r-cran-httpuv r-cran-jquerylib r-cran-knitr r-cran-later r-cran-mass 412s r-cran-memoise r-cran-phylobase r-cran-pixmap r-cran-plyr r-cran-promises 412s r-cran-purrr r-cran-rappdirs r-cran-rcpparmadillo r-cran-readxl 412s r-cran-rematch r-cran-reshape2 r-cran-rmarkdown r-cran-rnexml r-cran-sass 412s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-stringi r-cran-stringr 412s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-uuid r-cran-xfun 412s r-cran-xml2 r-cran-xtable r-cran-yaml zlib1g-dev 412s 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. 412s Need to get 105 MB of archives. 412s After this operation, 463 MB of additional disk space will be used. 412s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 412s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 412s Get:3 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 412s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 412s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 412s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 412s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 412s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 412s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 412s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 412s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 javascript-common all 11+nmu1 [5936 B] 412s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 412s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 412s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 412s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 412s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 412s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 412s Get:18 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 412s Get:19 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 412s Get:20 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 412s Get:21 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 412s Get:22 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 412s Get:23 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 412s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 412s Get:25 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 412s Get:26 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 412s Get:27 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 412s Get:28 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 412s Get:29 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 412s Get:30 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 412s Get:31 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 412s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 413s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 liblua5.4-0 amd64 5.4.6-3 [166 kB] 413s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 413s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 413s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 413s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 413s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 413s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 413s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 413s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 413s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 413s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 413s Get:44 http://ftpmaster.internal/ubuntu noble/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 413s Get:45 http://ftpmaster.internal/ubuntu noble/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 413s Get:46 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc-data all 3.1.3-1 [92.4 kB] 413s Get:47 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc amd64 3.1.3+ds-2 [26.9 MB] 413s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 413s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 413s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 413s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 413s Get:52 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 413s Get:53 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 413s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mass amd64 7.3-60.0.1-1 [1119 kB] 413s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pixmap all 0.4-12-1 [201 kB] 413s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sp amd64 1:2.1-2+dfsg-1 [1447 kB] 413s Get:57 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpparmadillo amd64 0.12.8.0.0-1 [862 kB] 413s Get:58 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ade4 amd64 1.7-22-1 [5333 kB] 413s Get:59 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 413s Get:60 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 413s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 413s Get:62 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 413s Get:63 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltools amd64 0.5.7-1 [369 kB] 413s Get:64 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 413s Get:65 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 413s Get:66 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 413s Get:67 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sass amd64 0.4.8+dfsg-1 [996 kB] 413s Get:68 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 413s Get:69 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rematch all 2.0.0-1 [18.3 kB] 413s Get:70 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cellranger all 1.1.0-3 [102 kB] 413s Get:71 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 413s Get:72 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 413s Get:73 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 413s Get:74 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyselect amd64 1.2.0+dfsg-1 [218 kB] 413s Get:75 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 413s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 413s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xfun amd64 0.41+dfsg-1 [415 kB] 413s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 413s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 413s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-promises amd64 1.2.1+dfsg-1 [284 kB] 413s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httpuv amd64 1.6.14+dfsg-1 [510 kB] 413s Get:82 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-yaml amd64 2.3.8-1 [108 kB] 413s Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 413s Get:84 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 413s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 413s Get:86 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 413s Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 413s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 413s Get:89 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-uuid amd64 1.2-0-1 [47.6 kB] 413s Get:90 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 413s Get:91 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 413s Get:92 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml2 amd64 1.3.6-1 [322 kB] 413s Get:93 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rnexml all 2.4.11+ds-1 [744 kB] 413s Get:94 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-phylobase amd64 0.8.12-1 [693 kB] 413s Get:95 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-readxl amd64 1.4.3-1 [736 kB] 413s Get:96 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytex all 0.49-1 [141 kB] 413s Get:97 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 413s Get:98 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 413s Get:99 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 413s Get:100 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 413s Get:101 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 413s Get:102 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 414s Fetched 105 MB in 1s (78.4 MB/s) 414s Selecting previously unselected package dctrl-tools. 414s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81827 files and directories currently installed.) 414s Preparing to unpack .../000-dctrl-tools_2.24-3build2_amd64.deb ... 414s Unpacking dctrl-tools (2.24-3build2) ... 414s Selecting previously unselected package fonts-font-awesome. 414s Preparing to unpack .../001-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 414s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 414s Selecting previously unselected package fonts-glyphicons-halflings. 414s Preparing to unpack .../002-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 414s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 414s Selecting previously unselected package fonts-mathjax. 414s Preparing to unpack .../003-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 414s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 414s Selecting previously unselected package libgfortran-13-dev:amd64. 414s Preparing to unpack .../004-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 414s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 414s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 414s Preparing to unpack .../005-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 414s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 414s Selecting previously unselected package gfortran-13. 414s Preparing to unpack .../006-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 414s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 414s Selecting previously unselected package gfortran-x86-64-linux-gnu. 414s Preparing to unpack .../007-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 414s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 414s Selecting previously unselected package gfortran. 414s Preparing to unpack .../008-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 414s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 414s Selecting previously unselected package icu-devtools. 414s Preparing to unpack .../009-icu-devtools_74.2-1ubuntu1_amd64.deb ... 414s Unpacking icu-devtools (74.2-1ubuntu1) ... 414s Selecting previously unselected package javascript-common. 414s Preparing to unpack .../010-javascript-common_11+nmu1_all.deb ... 415s Unpacking javascript-common (11+nmu1) ... 415s Selecting previously unselected package libblas-dev:amd64. 415s Preparing to unpack .../011-libblas-dev_3.12.0-3_amd64.deb ... 415s Unpacking libblas-dev:amd64 (3.12.0-3) ... 415s Selecting previously unselected package libbz2-dev:amd64. 415s Preparing to unpack .../012-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 415s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 415s Selecting previously unselected package libicu-dev:amd64. 415s Preparing to unpack .../013-libicu-dev_74.2-1ubuntu1_amd64.deb ... 415s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ... 415s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 415s Preparing to unpack .../014-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ... 415s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 415s Selecting previously unselected package libjpeg8-dev:amd64. 415s Preparing to unpack .../015-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 415s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 415s Selecting previously unselected package libjpeg-dev:amd64. 415s Preparing to unpack .../016-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 415s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 415s Selecting previously unselected package libjs-bootstrap. 415s Preparing to unpack .../017-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 415s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 415s Selecting previously unselected package libjs-popper.js. 415s Preparing to unpack .../018-libjs-popper.js_1.16.1+ds-6_all.deb ... 415s Unpacking libjs-popper.js (1.16.1+ds-6) ... 415s Selecting previously unselected package libjs-bootstrap4. 415s Preparing to unpack .../019-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 415s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 415s Selecting previously unselected package libjs-d3. 415s Preparing to unpack .../020-libjs-d3_3.5.17-4_all.deb ... 415s Unpacking libjs-d3 (3.5.17-4) ... 415s Selecting previously unselected package libjs-es5-shim. 415s Preparing to unpack .../021-libjs-es5-shim_4.6.7-2_all.deb ... 415s Unpacking libjs-es5-shim (4.6.7-2) ... 415s Selecting previously unselected package libjs-highlight.js. 415s Preparing to unpack .../022-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 415s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 415s Selecting previously unselected package libjs-jquery. 415s Preparing to unpack .../023-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 415s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 415s Selecting previously unselected package libjs-jquery-datatables. 415s Preparing to unpack .../024-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 415s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 415s Selecting previously unselected package libjs-sifter.js. 415s Preparing to unpack .../025-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 415s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 415s Selecting previously unselected package libjs-microplugin.js. 415s Preparing to unpack .../026-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 415s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 415s Selecting previously unselected package libjs-jquery-selectize.js. 415s Preparing to unpack .../027-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 415s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 415s Selecting previously unselected package libjs-jquery-ui. 415s Preparing to unpack .../028-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 415s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 415s Selecting previously unselected package libjs-json. 416s Preparing to unpack .../029-libjs-json_0~20221030+~1.0.8-1_all.deb ... 416s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 416s Selecting previously unselected package libjs-prettify. 416s Preparing to unpack .../030-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 416s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 416s Selecting previously unselected package liblapack-dev:amd64. 416s Preparing to unpack .../031-liblapack-dev_3.12.0-3_amd64.deb ... 416s Unpacking liblapack-dev:amd64 (3.12.0-3) ... 416s Selecting previously unselected package liblua5.4-0:amd64. 416s Preparing to unpack .../032-liblua5.4-0_5.4.6-3_amd64.deb ... 416s Unpacking liblua5.4-0:amd64 (5.4.6-3) ... 416s Selecting previously unselected package libncurses-dev:amd64. 416s Preparing to unpack .../033-libncurses-dev_6.4+20240113-1ubuntu1_amd64.deb ... 416s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 416s Selecting previously unselected package libpcre2-16-0:amd64. 416s Preparing to unpack .../034-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ... 416s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 416s Selecting previously unselected package libpcre2-32-0:amd64. 416s Preparing to unpack .../035-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ... 416s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 416s Selecting previously unselected package libpcre2-posix3:amd64. 416s Preparing to unpack .../036-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ... 416s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 416s Selecting previously unselected package libpcre2-dev:amd64. 416s Preparing to unpack .../037-libpcre2-dev_10.42-4ubuntu1_amd64.deb ... 416s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ... 416s Selecting previously unselected package libpkgconf3:amd64. 416s Preparing to unpack .../038-libpkgconf3_1.8.1-2_amd64.deb ... 416s Unpacking libpkgconf3:amd64 (1.8.1-2) ... 416s Selecting previously unselected package zlib1g-dev:amd64. 416s Preparing to unpack .../039-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ... 416s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 416s Selecting previously unselected package libpng-dev:amd64. 416s Preparing to unpack .../040-libpng-dev_1.6.43-1_amd64.deb ... 416s Unpacking libpng-dev:amd64 (1.6.43-1) ... 416s Selecting previously unselected package libreadline-dev:amd64. 416s Preparing to unpack .../041-libreadline-dev_8.2-3_amd64.deb ... 416s Unpacking libreadline-dev:amd64 (8.2-3) ... 416s Selecting previously unselected package node-bootstrap-sass. 416s Preparing to unpack .../042-node-bootstrap-sass_3.4.3-2_all.deb ... 416s Unpacking node-bootstrap-sass (3.4.3-2) ... 416s Selecting previously unselected package node-html5shiv. 416s Preparing to unpack .../043-node-html5shiv_3.7.3+dfsg-5_all.deb ... 416s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 416s Selecting previously unselected package node-normalize.css. 416s Preparing to unpack .../044-node-normalize.css_8.0.1-5_all.deb ... 416s Unpacking node-normalize.css (8.0.1-5) ... 416s Selecting previously unselected package pandoc-data. 416s Preparing to unpack .../045-pandoc-data_3.1.3-1_all.deb ... 416s Unpacking pandoc-data (3.1.3-1) ... 416s Selecting previously unselected package pandoc. 416s Preparing to unpack .../046-pandoc_3.1.3+ds-2_amd64.deb ... 416s Unpacking pandoc (3.1.3+ds-2) ... 417s Selecting previously unselected package pkgconf-bin. 417s Preparing to unpack .../047-pkgconf-bin_1.8.1-2_amd64.deb ... 417s Unpacking pkgconf-bin (1.8.1-2) ... 417s Selecting previously unselected package pkgconf:amd64. 417s Preparing to unpack .../048-pkgconf_1.8.1-2_amd64.deb ... 417s Unpacking pkgconf:amd64 (1.8.1-2) ... 417s Selecting previously unselected package pkg-config:amd64. 417s Preparing to unpack .../049-pkg-config_1.8.1-2_amd64.deb ... 417s Unpacking pkg-config:amd64 (1.8.1-2) ... 417s Selecting previously unselected package liblzma-dev:amd64. 417s Preparing to unpack .../050-liblzma-dev_5.4.5-0.3_amd64.deb ... 417s Unpacking liblzma-dev:amd64 (5.4.5-0.3) ... 417s Selecting previously unselected package r-base-dev. 417s Preparing to unpack .../051-r-base-dev_4.3.2-1build1_all.deb ... 417s Unpacking r-base-dev (4.3.2-1build1) ... 417s Selecting previously unselected package pkg-r-autopkgtest. 417s Preparing to unpack .../052-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 417s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 417s Selecting previously unselected package r-cran-mass. 417s Preparing to unpack .../053-r-cran-mass_7.3-60.0.1-1_amd64.deb ... 417s Unpacking r-cran-mass (7.3-60.0.1-1) ... 417s Selecting previously unselected package r-cran-pixmap. 417s Preparing to unpack .../054-r-cran-pixmap_0.4-12-1_all.deb ... 417s Unpacking r-cran-pixmap (0.4-12-1) ... 417s Selecting previously unselected package r-cran-sp. 417s Preparing to unpack .../055-r-cran-sp_1%3a2.1-2+dfsg-1_amd64.deb ... 417s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 417s Selecting previously unselected package r-cran-rcpparmadillo. 417s Preparing to unpack .../056-r-cran-rcpparmadillo_0.12.8.0.0-1_amd64.deb ... 417s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 417s Selecting previously unselected package r-cran-ade4. 418s Preparing to unpack .../057-r-cran-ade4_1.7-22-1_amd64.deb ... 418s Unpacking r-cran-ade4 (1.7-22-1) ... 418s Selecting previously unselected package r-cran-base64enc. 418s Preparing to unpack .../058-r-cran-base64enc_0.1-3-3_amd64.deb ... 418s Unpacking r-cran-base64enc (0.1-3-3) ... 418s Selecting previously unselected package r-cran-fastmap. 418s Preparing to unpack .../059-r-cran-fastmap_1.1.1-1_amd64.deb ... 418s Unpacking r-cran-fastmap (1.1.1-1) ... 418s Selecting previously unselected package r-cran-cachem. 418s Preparing to unpack .../060-r-cran-cachem_1.0.8-1_amd64.deb ... 418s Unpacking r-cran-cachem (1.0.8-1) ... 418s Selecting previously unselected package r-cran-ellipsis. 418s Preparing to unpack .../061-r-cran-ellipsis_0.3.2-2_amd64.deb ... 418s Unpacking r-cran-ellipsis (0.3.2-2) ... 418s Selecting previously unselected package r-cran-htmltools. 418s Preparing to unpack .../062-r-cran-htmltools_0.5.7-1_amd64.deb ... 418s Unpacking r-cran-htmltools (0.5.7-1) ... 418s Selecting previously unselected package r-cran-jquerylib. 418s Preparing to unpack .../063-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 418s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 418s Selecting previously unselected package r-cran-memoise. 418s Preparing to unpack .../064-r-cran-memoise_2.0.1-1_all.deb ... 418s Unpacking r-cran-memoise (2.0.1-1) ... 418s Selecting previously unselected package r-cran-rappdirs. 418s Preparing to unpack .../065-r-cran-rappdirs_0.3.3-1_amd64.deb ... 418s Unpacking r-cran-rappdirs (0.3.3-1) ... 418s Selecting previously unselected package r-cran-sass. 418s Preparing to unpack .../066-r-cran-sass_0.4.8+dfsg-1_amd64.deb ... 418s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 418s Selecting previously unselected package r-cran-bslib. 418s Preparing to unpack .../067-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 418s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 418s Selecting previously unselected package r-cran-rematch. 418s Preparing to unpack .../068-r-cran-rematch_2.0.0-1_all.deb ... 418s Unpacking r-cran-rematch (2.0.0-1) ... 418s Selecting previously unselected package r-cran-cellranger. 418s Preparing to unpack .../069-r-cran-cellranger_1.1.0-3_all.deb ... 418s Unpacking r-cran-cellranger (1.1.0-3) ... 418s Selecting previously unselected package r-cran-commonmark. 418s Preparing to unpack .../070-r-cran-commonmark_1.9.1-1_amd64.deb ... 418s Unpacking r-cran-commonmark (1.9.1-1) ... 418s Selecting previously unselected package r-cran-cpp11. 418s Preparing to unpack .../071-r-cran-cpp11_0.4.7-1_all.deb ... 418s Unpacking r-cran-cpp11 (0.4.7-1) ... 418s Selecting previously unselected package r-cran-generics. 418s Preparing to unpack .../072-r-cran-generics_0.1.3-1_all.deb ... 418s Unpacking r-cran-generics (0.1.3-1) ... 418s Selecting previously unselected package r-cran-tidyselect. 418s Preparing to unpack .../073-r-cran-tidyselect_1.2.0+dfsg-1_amd64.deb ... 418s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 418s Selecting previously unselected package r-cran-dplyr. 418s Preparing to unpack .../074-r-cran-dplyr_1.1.4-1_amd64.deb ... 418s Unpacking r-cran-dplyr (1.1.4-1) ... 418s Selecting previously unselected package r-cran-fontawesome. 418s Preparing to unpack .../075-r-cran-fontawesome_0.5.2-1_all.deb ... 418s Unpacking r-cran-fontawesome (0.5.2-1) ... 418s Selecting previously unselected package r-cran-xfun. 418s Preparing to unpack .../076-r-cran-xfun_0.41+dfsg-1_amd64.deb ... 418s Unpacking r-cran-xfun (0.41+dfsg-1) ... 418s Selecting previously unselected package r-cran-highr. 418s Preparing to unpack .../077-r-cran-highr_0.10+dfsg-1_all.deb ... 418s Unpacking r-cran-highr (0.10+dfsg-1) ... 419s Selecting previously unselected package r-cran-later. 419s Preparing to unpack .../078-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 419s Unpacking r-cran-later (1.3.2+dfsg-1) ... 419s Selecting previously unselected package r-cran-promises. 419s Preparing to unpack .../079-r-cran-promises_1.2.1+dfsg-1_amd64.deb ... 419s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 419s Selecting previously unselected package r-cran-httpuv. 419s Preparing to unpack .../080-r-cran-httpuv_1.6.14+dfsg-1_amd64.deb ... 419s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 419s Selecting previously unselected package r-cran-yaml. 419s Preparing to unpack .../081-r-cran-yaml_2.3.8-1_amd64.deb ... 419s Unpacking r-cran-yaml (2.3.8-1) ... 419s Selecting previously unselected package libjs-mathjax. 419s Preparing to unpack .../082-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 419s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 419s Selecting previously unselected package r-cran-knitr. 419s Preparing to unpack .../083-r-cran-knitr_1.45+dfsg-1_all.deb ... 419s Unpacking r-cran-knitr (1.45+dfsg-1) ... 420s Selecting previously unselected package r-cran-plyr. 420s Preparing to unpack .../084-r-cran-plyr_1.8.9-1_amd64.deb ... 420s Unpacking r-cran-plyr (1.8.9-1) ... 420s Selecting previously unselected package r-cran-stringi. 420s Preparing to unpack .../085-r-cran-stringi_1.8.3-1_amd64.deb ... 420s Unpacking r-cran-stringi (1.8.3-1) ... 420s Selecting previously unselected package r-cran-stringr. 420s Preparing to unpack .../086-r-cran-stringr_1.5.1-1_all.deb ... 420s Unpacking r-cran-stringr (1.5.1-1) ... 420s Selecting previously unselected package r-cran-reshape2. 420s Preparing to unpack .../087-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 420s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 420s Selecting previously unselected package r-cran-uuid. 420s Preparing to unpack .../088-r-cran-uuid_1.2-0-1_amd64.deb ... 420s Unpacking r-cran-uuid (1.2-0-1) ... 420s Selecting previously unselected package r-cran-purrr. 420s Preparing to unpack .../089-r-cran-purrr_1.0.2-1_amd64.deb ... 420s Unpacking r-cran-purrr (1.0.2-1) ... 420s Selecting previously unselected package r-cran-tidyr. 420s Preparing to unpack .../090-r-cran-tidyr_1.3.1-1_amd64.deb ... 420s Unpacking r-cran-tidyr (1.3.1-1) ... 420s Selecting previously unselected package r-cran-xml2. 420s Preparing to unpack .../091-r-cran-xml2_1.3.6-1_amd64.deb ... 420s Unpacking r-cran-xml2 (1.3.6-1) ... 420s Selecting previously unselected package r-cran-rnexml. 420s Preparing to unpack .../092-r-cran-rnexml_2.4.11+ds-1_all.deb ... 420s Unpacking r-cran-rnexml (2.4.11+ds-1) ... 420s Selecting previously unselected package r-cran-phylobase. 420s Preparing to unpack .../093-r-cran-phylobase_0.8.12-1_amd64.deb ... 420s Unpacking r-cran-phylobase (0.8.12-1) ... 420s Selecting previously unselected package r-cran-readxl. 420s Preparing to unpack .../094-r-cran-readxl_1.4.3-1_amd64.deb ... 420s Unpacking r-cran-readxl (1.4.3-1) ... 420s Selecting previously unselected package r-cran-tinytex. 420s Preparing to unpack .../095-r-cran-tinytex_0.49-1_all.deb ... 420s Unpacking r-cran-tinytex (0.49-1) ... 420s Selecting previously unselected package libjs-modernizr. 420s Preparing to unpack .../096-libjs-modernizr_2.6.2+ds1-5_all.deb ... 420s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 420s Selecting previously unselected package r-cran-xtable. 420s Preparing to unpack .../097-r-cran-xtable_1%3a1.8-4-2_all.deb ... 420s Unpacking r-cran-xtable (1:1.8-4-2) ... 420s Selecting previously unselected package r-cran-sourcetools. 420s Preparing to unpack .../098-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 420s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 420s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 420s Preparing to unpack .../099-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 420s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 420s Selecting previously unselected package r-cran-shiny. 420s Preparing to unpack .../100-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 420s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 420s Selecting previously unselected package r-cran-rmarkdown. 420s Preparing to unpack .../101-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 420s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 420s Setting up libjs-json (0~20221030+~1.0.8-1) ... 420s Setting up javascript-common (11+nmu1) ... 420s Setting up r-cran-ellipsis (0.3.2-2) ... 420s Setting up r-cran-rematch (2.0.0-1) ... 420s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 420s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 420s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 420s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 420s Setting up libjs-popper.js (1.16.1+ds-6) ... 420s Setting up r-cran-uuid (1.2-0-1) ... 420s Setting up r-cran-xfun (0.41+dfsg-1) ... 420s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 420s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 420s Setting up r-cran-generics (0.1.3-1) ... 420s Setting up r-cran-base64enc (0.1-3-3) ... 420s Setting up r-cran-cellranger (1.1.0-3) ... 421s Setting up r-cran-yaml (2.3.8-1) ... 421s Setting up node-html5shiv (3.7.3+dfsg-5) ... 421s Setting up r-cran-mass (7.3-60.0.1-1) ... 421s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 421s Setting up libreadline-dev:amd64 (8.2-3) ... 421s Setting up libjs-modernizr (2.6.2+ds1-5) ... 421s Setting up r-cran-xtable (1:1.8-4-2) ... 421s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 421s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 421s Setting up libjs-es5-shim (4.6.7-2) ... 421s Setting up r-cran-fastmap (1.1.1-1) ... 421s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 421s Setting up r-cran-sp (1:2.1-2+dfsg-1) ... 421s Setting up libpkgconf3:amd64 (1.8.1-2) ... 421s Setting up r-cran-stringi (1.8.3-1) ... 421s Setting up r-cran-cpp11 (0.4.7-1) ... 421s Setting up r-cran-plyr (1.8.9-1) ... 421s Setting up libjs-d3 (3.5.17-4) ... 421s Setting up r-cran-purrr (1.0.2-1) ... 421s Setting up icu-devtools (74.2-1ubuntu1) ... 421s Setting up r-cran-sourcetools (0.1.7-1-1) ... 421s Setting up pkgconf-bin (1.8.1-2) ... 421s Setting up r-cran-later (1.3.2+dfsg-1) ... 421s Setting up r-cran-htmltools (0.5.7-1) ... 421s Setting up r-cran-tinytex (0.49-1) ... 421s Setting up liblzma-dev:amd64 (5.4.5-0.3) ... 421s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 421s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 421s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 421s Setting up r-cran-pixmap (0.4-12-1) ... 421s Setting up r-cran-cachem (1.0.8-1) ... 421s Setting up liblua5.4-0:amd64 (5.4.6-3) ... 421s Setting up r-cran-dplyr (1.1.4-1) ... 421s Setting up node-bootstrap-sass (3.4.3-2) ... 421s Setting up r-cran-rcpparmadillo (0.12.8.0.0-1) ... 421s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 421s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 421s Setting up r-cran-commonmark (1.9.1-1) ... 421s Setting up pandoc-data (3.1.3-1) ... 421s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 421s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 421s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 421s Setting up node-normalize.css (8.0.1-5) ... 421s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ... 421s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 421s Setting up r-cran-rappdirs (0.3.3-1) ... 421s Setting up libblas-dev:amd64 (3.12.0-3) ... 421s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 421s Setting up dctrl-tools (2.24-3build2) ... 421s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 421s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 421s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 421s Setting up r-cran-readxl (1.4.3-1) ... 421s Setting up r-cran-stringr (1.5.1-1) ... 421s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ... 421s Setting up r-cran-xml2 (1.3.6-1) ... 421s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 421s Setting up libpng-dev:amd64 (1.6.43-1) ... 421s Setting up r-cran-highr (0.10+dfsg-1) ... 421s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 421s Setting up r-cran-fontawesome (0.5.2-1) ... 421s Setting up r-cran-ade4 (1.7-22-1) ... 421s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 421s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 421s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 421s Setting up pkgconf:amd64 (1.8.1-2) ... 421s Setting up r-cran-reshape2 (1.4.4-2build1) ... 421s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 421s Setting up pandoc (3.1.3+ds-2) ... 421s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 421s Setting up r-cran-memoise (2.0.1-1) ... 421s Setting up liblapack-dev:amd64 (3.12.0-3) ... 421s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 421s Setting up r-cran-promises (1.2.1+dfsg-1) ... 421s Setting up pkg-config:amd64 (1.8.1-2) ... 421s Setting up r-cran-tidyr (1.3.1-1) ... 421s Setting up r-cran-knitr (1.45+dfsg-1) ... 421s Setting up r-cran-rnexml (2.4.11+ds-1) ... 421s Setting up r-cran-sass (0.4.8+dfsg-1) ... 421s Setting up r-cran-phylobase (0.8.12-1) ... 421s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 421s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 421s Setting up gfortran (4:13.2.0-7ubuntu1) ... 421s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 421s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 421s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 421s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 421s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 421s Setting up r-base-dev (4.3.2-1build1) ... 421s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 421s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 421s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 421s Processing triggers for fontconfig (2.15.0-1ubuntu1) ... 421s Processing triggers for libc-bin (2.39-0ubuntu6) ... 421s Processing triggers for man-db (2.12.0-3) ... 421s Processing triggers for install-info (7.1-3) ... 428s Reading package lists... 428s Building dependency tree... 428s Reading state information... 428s Starting pkgProblemResolver with broken count: 0 428s Starting 2 pkgProblemResolver with broken count: 0 428s Done 428s The following NEW packages will be installed: 428s autopkgtest-satdep 428s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 428s Need to get 0 B/696 B of archives. 428s After this operation, 0 B of additional disk space will be used. 428s Get:1 /tmp/autopkgtest.MnmG5x/4-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 428s Selecting previously unselected package autopkgtest-satdep. 428s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 94064 files and directories currently installed.) 428s Preparing to unpack .../4-autopkgtest-satdep.deb ... 428s Unpacking autopkgtest-satdep (0) ... 428s Setting up autopkgtest-satdep (0) ... 430s (Reading database ... 94064 files and directories currently installed.) 430s Removing autopkgtest-satdep (0) ... 430s autopkgtest [21:03:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 430s autopkgtest [21:03:55]: test pkg-r-autopkgtest: [----------------------- 430s Test: Try to load the R library rotl 431s 431s R version 4.3.2 (2023-10-31) -- "Eye Holes" 431s Copyright (C) 2023 The R Foundation for Statistical Computing 431s Platform: x86_64-pc-linux-gnu (64-bit) 431s 431s R is free software and comes with ABSOLUTELY NO WARRANTY. 431s You are welcome to redistribute it under certain conditions. 431s Type 'license()' or 'licence()' for distribution details. 431s 431s R is a collaborative project with many contributors. 431s Type 'contributors()' for more information and 431s 'citation()' on how to cite R or R packages in publications. 431s 431s Type 'demo()' for some demos, 'help()' for on-line help, or 431s 'help.start()' for an HTML browser interface to help. 431s Type 'q()' to quit R. 431s 431s > library('rotl') 431s > 431s > 431s Other tests are currently unsupported! 431s They will be progressively added. 432s autopkgtest [21:03:57]: test pkg-r-autopkgtest: -----------------------] 432s autopkgtest [21:03:57]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 432s pkg-r-autopkgtest PASS 432s autopkgtest [21:03:57]: @@@@@@@@@@@@@@@@@@@@ summary 432s run-unit-test PASS 432s pkg-r-autopkgtest PASS 441s Creating nova instance adt-noble-i386-r-cran-rotl-20240323-205645-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240323.img (UUID 5df8a563-0957-4fdd-8453-862df650aaf8)...