0s autopkgtest [05:49:13]: starting date and time: 2024-03-21 05:49:13+0000
  0s autopkgtest [05:49:13]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
  0s autopkgtest [05:49:13]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.h9vcswoc/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base --apt-upgrade r-cran-g.data --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-43.secgroup --name adt-noble-i386-r-cran-g.data-20240321-054913-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
611s autopkgtest [05:59:24]: testbed dpkg architecture: amd64
611s autopkgtest [05:59:24]: testbed apt version: 2.7.12
611s autopkgtest [05:59:24]: test architecture: i386
611s autopkgtest [05:59:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup
611s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
612s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [495 kB]
612s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3812 kB]
612s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB]
612s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
612s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [459 kB]
612s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [704 kB]
612s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B]
612s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [36.6 kB]
612s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B]
612s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B]
612s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB]
613s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1278 kB]
613s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B]
613s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB]
613s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB]
613s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B]
615s Fetched 11.3 MB in 1s (7701 kB/s)
615s Reading package lists...
617s Reading package lists...
617s Building dependency tree...
617s Reading state information...
617s Calculating upgrade...
618s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
618s Reading package lists...
618s Building dependency tree...
618s Reading state information...
618s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
618s sh: Attempting to set up Debian/Ubuntu apt sources automatically
619s sh: Distribution appears to be Ubuntu
619s Reading package lists...
620s Building dependency tree...
620s Reading state information...
620s eatmydata is already the newest version (131-1).
620s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
620s Reading package lists...
620s Building dependency tree...
620s Reading state information...
620s dbus is already the newest version (1.14.10-4ubuntu1).
620s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
620s Reading package lists...
621s Building dependency tree...
621s Reading state information...
621s rng-tools-debian is already the newest version (2.4).
621s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
621s Reading package lists...
621s Building dependency tree...
621s Reading state information...
621s The following packages will be REMOVED:
621s   cloud-init* python3-configobj* python3-debconf*
621s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
621s After this operation, 3252 kB disk space will be freed.
622s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71803 files and directories currently installed.)
622s Removing cloud-init (24.1.1-0ubuntu1) ...
622s Removing python3-configobj (5.0.8-3) ...
622s Removing python3-debconf (1.5.86) ...
622s Processing triggers for man-db (2.12.0-3) ...
623s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71414 files and directories currently installed.)
623s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ...
624s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
624s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
624s invoke-rc.d: policy-rc.d denied execution of try-restart.
624s Reading package lists...
624s Building dependency tree...
624s Reading state information...
624s linux-generic is already the newest version (6.8.0-11.11+1).
624s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
624s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
624s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
624s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
627s Reading package lists...
627s Reading package lists...
627s Building dependency tree...
627s Reading state information...
627s Calculating upgrade...
627s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
627s Reading package lists...
628s Building dependency tree...
628s Reading state information...
628s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
628s autopkgtest [05:59:41]: rebooting testbed after setup commands that affected boot
654s autopkgtest [06:00:07]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024
655s autopkgtest [06:00:08]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-g.data
656s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-g.data 2.4.1-1 (dsc) [2092 B]
656s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-g.data 2.4.1-1 (tar) [118 kB]
656s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-g.data 2.4.1-1 (diff) [3152 B]
656s gpgv: Signature made Thu Feb  1 15:44:23 2024 UTC
656s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
656s gpgv:                issuer "tille@debian.org"
656s gpgv: Can't check signature: No public key
656s dpkg-source: warning: cannot verify inline signature for ./r-cran-g.data_2.4.1-1.dsc: no acceptable signature found
656s autopkgtest [06:00:09]: testing package r-cran-g.data version 2.4.1-1
656s autopkgtest [06:00:09]: build not needed
660s autopkgtest [06:00:13]: test run-unit-test: preparing testbed
663s Note, using file '/tmp/autopkgtest.chpLRS/1-autopkgtest-satdep.dsc' to get the build dependencies
663s Reading package lists...
663s Building dependency tree...
663s Reading state information...
663s Starting pkgProblemResolver with broken count: 0
663s Starting 2 pkgProblemResolver with broken count: 0
663s Done
663s The following NEW packages will be installed:
663s   build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu
663s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-13
663s   g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13
663s   gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu libasan8 libatomic1 libblas3
663s   libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1
663s   libdeflate0 libfontconfig1 libgcc-13-dev libgfortran5 libgomp1
663s   libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libisl23 libitm1 libjbig0
663s   libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 liblsan0 libmpc3 libnsl-dev
663s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
663s   libpaper1 libpixman-1-0 libquadmath0 libsharpyuv0 libsm6 libstdc++-13-dev
663s   libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2
663s   libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1
663s   libxt6 linux-libc-dev r-base-core r-cran-g.data rpcsvc-proto unzip
663s   x11-common xdg-utils zip
664s 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded.
664s Need to get 104 MB of archives.
664s After this operation, 322 MB of additional disk space will be used.
664s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB]
664s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB]
664s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB]
664s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB]
664s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB]
664s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB]
664s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB]
664s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB]
664s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB]
664s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB]
664s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B]
664s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B]
664s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB]
664s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB]
664s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB]
664s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB]
664s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB]
664s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB]
664s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB]
664s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB]
664s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB]
664s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB]
664s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB]
664s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB]
664s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB]
664s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB]
664s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B]
664s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B]
664s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB]
664s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB]
664s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB]
664s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B]
664s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B]
664s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
664s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
664s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
664s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB]
664s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB]
664s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB]
664s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB]
664s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB]
664s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB]
664s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B]
664s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB]
664s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB]
664s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB]
664s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB]
664s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB]
664s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB]
664s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB]
664s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
664s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB]
664s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB]
664s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
664s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB]
664s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB]
664s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB]
664s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB]
664s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB]
664s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB]
664s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB]
664s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB]
664s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B]
664s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB]
664s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB]
664s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB]
664s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB]
664s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB]
664s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB]
664s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB]
664s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B]
664s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB]
664s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB]
664s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB]
664s Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB]
664s Get:76 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
664s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB]
664s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-g.data all 2.4.1-1 [132 kB]
665s Preconfiguring packages ...
665s Fetched 104 MB in 1s (114 MB/s)
665s Selecting previously unselected package libc-dev-bin.
665s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71359 files and directories currently installed.)
665s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_amd64.deb ...
665s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
665s Selecting previously unselected package linux-libc-dev:amd64.
665s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_amd64.deb ...
665s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ...
665s Selecting previously unselected package libcrypt-dev:amd64.
665s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_amd64.deb ...
665s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ...
665s Selecting previously unselected package libtirpc-dev:amd64.
665s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ...
665s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ...
665s Selecting previously unselected package libnsl-dev:amd64.
665s Preparing to unpack .../04-libnsl-dev_1.3.0-3_amd64.deb ...
665s Unpacking libnsl-dev:amd64 (1.3.0-3) ...
665s Selecting previously unselected package rpcsvc-proto.
665s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ...
665s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
666s Selecting previously unselected package libc6-dev:amd64.
666s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_amd64.deb ...
666s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ...
666s Selecting previously unselected package libisl23:amd64.
666s Preparing to unpack .../07-libisl23_0.26-3_amd64.deb ...
666s Unpacking libisl23:amd64 (0.26-3) ...
666s Selecting previously unselected package libmpc3:amd64.
666s Preparing to unpack .../08-libmpc3_1.3.1-1_amd64.deb ...
666s Unpacking libmpc3:amd64 (1.3.1-1) ...
666s Selecting previously unselected package cpp-13-x86-64-linux-gnu.
666s Preparing to unpack .../09-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ...
666s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
666s Selecting previously unselected package cpp-13.
666s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_amd64.deb ...
666s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
666s Selecting previously unselected package cpp-x86-64-linux-gnu.
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666s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
666s Selecting previously unselected package cpp.
666s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ...
666s Unpacking cpp (4:13.2.0-7ubuntu1) ...
666s Selecting previously unselected package libcc1-0:amd64.
666s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libgomp1:amd64.
666s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libitm1:amd64.
666s Preparing to unpack .../15-libitm1_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libatomic1:amd64.
666s Preparing to unpack .../16-libatomic1_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libasan8:amd64.
666s Preparing to unpack .../17-libasan8_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package liblsan0:amd64.
666s Preparing to unpack .../18-liblsan0_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libtsan2:amd64.
666s Preparing to unpack .../19-libtsan2_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libubsan1:amd64.
666s Preparing to unpack .../20-libubsan1_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ...
666s Selecting previously unselected package libhwasan0:amd64.
666s Preparing to unpack .../21-libhwasan0_14-20240303-1ubuntu1_amd64.deb ...
666s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ...
667s Selecting previously unselected package libquadmath0:amd64.
667s Preparing to unpack .../22-libquadmath0_14-20240303-1ubuntu1_amd64.deb ...
667s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ...
667s Selecting previously unselected package libgcc-13-dev:amd64.
667s Preparing to unpack .../23-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ...
667s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ...
667s Selecting previously unselected package gcc-13-x86-64-linux-gnu.
667s Preparing to unpack .../24-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ...
667s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
667s Selecting previously unselected package gcc-13.
667s Preparing to unpack .../25-gcc-13_13.2.0-17ubuntu2_amd64.deb ...
667s Unpacking gcc-13 (13.2.0-17ubuntu2) ...
667s Selecting previously unselected package gcc-x86-64-linux-gnu.
667s Preparing to unpack .../26-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ...
667s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
667s Selecting previously unselected package gcc.
667s Preparing to unpack .../27-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ...
667s Unpacking gcc (4:13.2.0-7ubuntu1) ...
667s Selecting previously unselected package libstdc++-13-dev:amd64.
667s Preparing to unpack .../28-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ...
667s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ...
667s Selecting previously unselected package g++-13-x86-64-linux-gnu.
667s Preparing to unpack .../29-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ...
667s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
668s Selecting previously unselected package g++-13.
668s Preparing to unpack .../30-g++-13_13.2.0-17ubuntu2_amd64.deb ...
668s Unpacking g++-13 (13.2.0-17ubuntu2) ...
668s Selecting previously unselected package g++-x86-64-linux-gnu.
668s Preparing to unpack .../31-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ...
668s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
668s Selecting previously unselected package g++.
668s Preparing to unpack .../32-g++_4%3a13.2.0-7ubuntu1_amd64.deb ...
668s Unpacking g++ (4:13.2.0-7ubuntu1) ...
668s Selecting previously unselected package build-essential.
668s Preparing to unpack .../33-build-essential_12.10ubuntu1_amd64.deb ...
668s Unpacking build-essential (12.10ubuntu1) ...
668s Selecting previously unselected package fonts-dejavu-mono.
668s Preparing to unpack .../34-fonts-dejavu-mono_2.37-8_all.deb ...
668s Unpacking fonts-dejavu-mono (2.37-8) ...
668s Selecting previously unselected package fonts-dejavu-core.
668s Preparing to unpack .../35-fonts-dejavu-core_2.37-8_all.deb ...
668s Unpacking fonts-dejavu-core (2.37-8) ...
668s Selecting previously unselected package fontconfig-config.
668s Preparing to unpack .../36-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ...
668s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
668s Selecting previously unselected package libfontconfig1:amd64.
668s Preparing to unpack .../37-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ...
668s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ...
668s Selecting previously unselected package fontconfig.
668s Preparing to unpack .../38-fontconfig_2.15.0-1ubuntu1_amd64.deb ...
668s Unpacking fontconfig (2.15.0-1ubuntu1) ...
668s Selecting previously unselected package libblas3:amd64.
668s Preparing to unpack .../39-libblas3_3.12.0-3_amd64.deb ...
668s Unpacking libblas3:amd64 (3.12.0-3) ...
668s Selecting previously unselected package libpixman-1-0:amd64.
668s Preparing to unpack .../40-libpixman-1-0_0.42.2-1_amd64.deb ...
668s Unpacking libpixman-1-0:amd64 (0.42.2-1) ...
668s Selecting previously unselected package libxcb-render0:amd64.
668s Preparing to unpack .../41-libxcb-render0_1.15-1_amd64.deb ...
668s Unpacking libxcb-render0:amd64 (1.15-1) ...
668s Selecting previously unselected package libxcb-shm0:amd64.
668s Preparing to unpack .../42-libxcb-shm0_1.15-1_amd64.deb ...
668s Unpacking libxcb-shm0:amd64 (1.15-1) ...
668s Selecting previously unselected package libxrender1:amd64.
668s Preparing to unpack .../43-libxrender1_1%3a0.9.10-1.1_amd64.deb ...
668s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ...
668s Selecting previously unselected package libcairo2:amd64.
668s Preparing to unpack .../44-libcairo2_1.18.0-1_amd64.deb ...
668s Unpacking libcairo2:amd64 (1.18.0-1) ...
668s Selecting previously unselected package libdatrie1:amd64.
668s Preparing to unpack .../45-libdatrie1_0.2.13-3_amd64.deb ...
668s Unpacking libdatrie1:amd64 (0.2.13-3) ...
668s Selecting previously unselected package libdeflate0:amd64.
668s Preparing to unpack .../46-libdeflate0_1.19-1_amd64.deb ...
668s Unpacking libdeflate0:amd64 (1.19-1) ...
668s Selecting previously unselected package libgfortran5:amd64.
668s Preparing to unpack .../47-libgfortran5_14-20240303-1ubuntu1_amd64.deb ...
668s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ...
668s Selecting previously unselected package libgraphite2-3:amd64.
668s Preparing to unpack .../48-libgraphite2-3_1.3.14-2_amd64.deb ...
668s Unpacking libgraphite2-3:amd64 (1.3.14-2) ...
669s Selecting previously unselected package libharfbuzz0b:amd64.
669s Preparing to unpack .../49-libharfbuzz0b_8.3.0-2_amd64.deb ...
669s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ...
669s Selecting previously unselected package x11-common.
669s Preparing to unpack .../50-x11-common_1%3a7.7+23ubuntu2_all.deb ...
669s Unpacking x11-common (1:7.7+23ubuntu2) ...
669s Selecting previously unselected package libice6:amd64.
669s Preparing to unpack .../51-libice6_2%3a1.0.10-1build2_amd64.deb ...
669s Unpacking libice6:amd64 (2:1.0.10-1build2) ...
669s Selecting previously unselected package libjpeg-turbo8:amd64.
669s Preparing to unpack .../52-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ...
669s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ...
669s Selecting previously unselected package libjpeg8:amd64.
669s Preparing to unpack .../53-libjpeg8_8c-2ubuntu11_amd64.deb ...
669s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ...
669s Selecting previously unselected package liblapack3:amd64.
669s Preparing to unpack .../54-liblapack3_3.12.0-3_amd64.deb ...
669s Unpacking liblapack3:amd64 (3.12.0-3) ...
669s Selecting previously unselected package liblerc4:amd64.
669s Preparing to unpack .../55-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ...
669s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ...
669s Selecting previously unselected package libthai-data.
669s Preparing to unpack .../56-libthai-data_0.1.29-2_all.deb ...
669s Unpacking libthai-data (0.1.29-2) ...
669s Selecting previously unselected package libthai0:amd64.
669s Preparing to unpack .../57-libthai0_0.1.29-2_amd64.deb ...
669s Unpacking libthai0:amd64 (0.1.29-2) ...
669s Selecting previously unselected package libpango-1.0-0:amd64.
669s Preparing to unpack .../58-libpango-1.0-0_1.51.0+ds-4_amd64.deb ...
669s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ...
669s Selecting previously unselected package libpangoft2-1.0-0:amd64.
669s Preparing to unpack .../59-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ...
669s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ...
669s Selecting previously unselected package libpangocairo-1.0-0:amd64.
669s Preparing to unpack .../60-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ...
669s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ...
669s Selecting previously unselected package libpaper1:amd64.
669s Preparing to unpack .../61-libpaper1_1.1.29_amd64.deb ...
669s Unpacking libpaper1:amd64 (1.1.29) ...
669s Selecting previously unselected package libpaper-utils.
669s Preparing to unpack .../62-libpaper-utils_1.1.29_amd64.deb ...
669s Unpacking libpaper-utils (1.1.29) ...
669s Selecting previously unselected package libsharpyuv0:amd64.
669s Preparing to unpack .../63-libsharpyuv0_1.3.2-0.4_amd64.deb ...
669s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ...
669s Selecting previously unselected package libsm6:amd64.
669s Preparing to unpack .../64-libsm6_2%3a1.2.3-1build2_amd64.deb ...
669s Unpacking libsm6:amd64 (2:1.2.3-1build2) ...
669s Selecting previously unselected package libtcl8.6:amd64.
669s Preparing to unpack .../65-libtcl8.6_8.6.13+dfsg-2_amd64.deb ...
669s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ...
669s Selecting previously unselected package libjbig0:amd64.
669s Preparing to unpack .../66-libjbig0_2.1-6.1ubuntu1_amd64.deb ...
669s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ...
669s Selecting previously unselected package libwebp7:amd64.
669s Preparing to unpack .../67-libwebp7_1.3.2-0.4_amd64.deb ...
669s Unpacking libwebp7:amd64 (1.3.2-0.4) ...
669s Selecting previously unselected package libtiff6:amd64.
669s Preparing to unpack .../68-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ...
669s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ...
669s Selecting previously unselected package libxft2:amd64.
669s Preparing to unpack .../69-libxft2_2.3.6-1_amd64.deb ...
669s Unpacking libxft2:amd64 (2.3.6-1) ...
669s Selecting previously unselected package libxss1:amd64.
669s Preparing to unpack .../70-libxss1_1%3a1.2.3-1build2_amd64.deb ...
669s Unpacking libxss1:amd64 (1:1.2.3-1build2) ...
669s Selecting previously unselected package libtk8.6:amd64.
669s Preparing to unpack .../71-libtk8.6_8.6.13-2_amd64.deb ...
669s Unpacking libtk8.6:amd64 (8.6.13-2) ...
669s Selecting previously unselected package libxt6:amd64.
669s Preparing to unpack .../72-libxt6_1%3a1.2.1-1.1_amd64.deb ...
669s Unpacking libxt6:amd64 (1:1.2.1-1.1) ...
669s Selecting previously unselected package zip.
669s Preparing to unpack .../73-zip_3.0-13_amd64.deb ...
669s Unpacking zip (3.0-13) ...
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669s Preparing to unpack .../74-unzip_6.0-28ubuntu3_amd64.deb ...
669s Unpacking unzip (6.0-28ubuntu3) ...
669s Selecting previously unselected package xdg-utils.
669s Preparing to unpack .../75-xdg-utils_1.1.3-4.1ubuntu3_all.deb ...
669s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ...
669s Selecting previously unselected package r-base-core.
669s Preparing to unpack .../76-r-base-core_4.3.2-1build1_amd64.deb ...
669s Unpacking r-base-core (4.3.2-1build1) ...
670s Selecting previously unselected package r-cran-g.data.
670s Preparing to unpack .../77-r-cran-g.data_2.4.1-1_all.deb ...
670s Unpacking r-cran-g.data (2.4.1-1) ...
670s Setting up libgraphite2-3:amd64 (1.3.14-2) ...
670s Setting up libpixman-1-0:amd64 (0.42.2-1) ...
670s Setting up libsharpyuv0:amd64 (1.3.2-0.4) ...
670s Setting up libpaper1:amd64 (1.1.29) ...
670s 
670s Creating config file /etc/papersize with new version
670s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu1) ...
670s Setting up libxrender1:amd64 (1:0.9.10-1.1) ...
670s Setting up libdatrie1:amd64 (0.2.13-3) ...
670s Setting up libxcb-render0:amd64 (1.15-1) ...
670s Setting up unzip (6.0-28ubuntu3) ...
670s Setting up x11-common (1:7.7+23ubuntu2) ...
670s Setting up libdeflate0:amd64 (1.19-1) ...
670s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ...
670s Setting up libxcb-shm0:amd64 (1.15-1) ...
670s Setting up libpaper-utils (1.1.29) ...
670s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libjbig0:amd64 (2.1-6.1ubuntu1) ...
670s Setting up zip (3.0-13) ...
670s Setting up libblas3:amd64 (3.12.0-3) ...
670s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
670s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ...
670s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
670s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ...
670s Setting up fonts-dejavu-mono (2.37-8) ...
670s Setting up libmpc3:amd64 (1.3.1-1) ...
670s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ...
670s Setting up fonts-dejavu-core (2.37-8) ...
670s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ...
670s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libwebp7:amd64 (1.3.2-0.4) ...
670s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libnsl-dev:amd64 (1.3.0-3) ...
670s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ...
670s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libharfbuzz0b:amd64 (8.3.0-2) ...
670s Setting up libthai-data (0.1.29-2) ...
670s Setting up libxss1:amd64 (1:1.2.3-1build2) ...
670s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libisl23:amd64 (0.26-3) ...
670s Setting up libc-dev-bin (2.39-0ubuntu2) ...
670s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
670s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
670s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ...
670s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ...
670s Setting up libjpeg8:amd64 (8c-2ubuntu11) ...
670s Setting up libice6:amd64 (2:1.0.10-1build2) ...
670s Setting up liblapack3:amd64 (3.12.0-3) ...
670s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
670s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
670s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
671s Setting up libthai0:amd64 (0.1.29-2) ...
671s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ...
671s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ...
671s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ...
671s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ...
671s Setting up libsm6:amd64 (2:1.2.3-1build2) ...
671s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ...
671s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
671s Setting up fontconfig (2.15.0-1ubuntu1) ...
673s Regenerating fonts cache... done.
673s Setting up libxft2:amd64 (2.3.6-1) ...
673s Setting up cpp-13 (13.2.0-17ubuntu2) ...
673s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
673s Setting up libtk8.6:amd64 (8.6.13-2) ...
673s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ...
673s Setting up libcairo2:amd64 (1.18.0-1) ...
673s Setting up gcc-13 (13.2.0-17ubuntu2) ...
673s Setting up libxt6:amd64 (1:1.2.1-1.1) ...
673s Setting up cpp (4:13.2.0-7ubuntu1) ...
673s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ...
673s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ...
673s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
673s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
673s Setting up gcc (4:13.2.0-7ubuntu1) ...
673s Setting up r-base-core (4.3.2-1build1) ...
673s 
673s Creating config file /etc/R/Renviron with new version
673s Setting up r-cran-g.data (2.4.1-1) ...
673s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
673s Setting up g++-13 (13.2.0-17ubuntu2) ...
673s Setting up g++ (4:13.2.0-7ubuntu1) ...
673s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
673s Setting up build-essential (12.10ubuntu1) ...
673s Processing triggers for libc-bin (2.39-0ubuntu2) ...
673s Processing triggers for man-db (2.12.0-3) ...
674s Processing triggers for install-info (7.1-3) ...
681s Reading package lists...
681s Building dependency tree...
681s Reading state information...
681s Starting pkgProblemResolver with broken count: 0
681s Starting 2 pkgProblemResolver with broken count: 0
681s Done
682s The following NEW packages will be installed:
682s   autopkgtest-satdep
682s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
682s Need to get 0 B/700 B of archives.
682s After this operation, 0 B of additional disk space will be used.
682s Get:1 /tmp/autopkgtest.chpLRS/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B]
682s Selecting previously unselected package autopkgtest-satdep.
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682s Preparing to unpack .../2-autopkgtest-satdep.deb ...
682s Unpacking autopkgtest-satdep (0) ...
682s Setting up autopkgtest-satdep (0) ...
684s (Reading database ... 76407 files and directories currently installed.)
684s Removing autopkgtest-satdep (0) ...
684s autopkgtest [06:00:37]: test run-unit-test: [-----------------------
684s 
684s R version 4.3.2 (2023-10-31) -- "Eye Holes"
684s Copyright (C) 2023 The R Foundation for Statistical Computing
684s Platform: x86_64-pc-linux-gnu (64-bit)
684s 
684s R is free software and comes with ABSOLUTELY NO WARRANTY.
684s You are welcome to redistribute it under certain conditions.
684s Type 'license()' or 'licence()' for distribution details.
684s 
684s R is a collaborative project with many contributors.
684s Type 'contributors()' for more information and
684s 'citation()' on how to cite R or R packages in publications.
684s 
684s Type 'demo()' for some demos, 'help()' for on-line help, or
684s 'help.start()' for an HTML browser interface to help.
684s Type 'q()' to quit R.
684s 
684s >   Stangle("g.data.Rnw")
685s Writing to file g.data.R 
685s >   source("g.data.R", echo=TRUE)
685s 
685s > options(width = 80, digits = 4, scipen = 5)
685s 
685s > if ("package:g.data" %in% search()) detach("package:g.data")
685s 
685s > require(g.data)
685s Loading required package: g.data
685s 
685s > (ddp <- tempfile("newdir"))
685s [1] "/tmp/RtmpSsSu6y/newdira591a6affc9"
685s 
685s > g.data.attach(ddp)
685s 
685s > search()[1:3]
685s [1] ".GlobalEnv"        "newdira591a6affc9" "package:g.data"   
685s 
685s > assign("m1", matrix(1, 5000, 1000), 2)
685s 
685s > assign("m2", matrix(2, 5000, 1000), 2)
685s 
685s > ls(2)
685s [1] "m1" "m2"
685s 
685s > g.data.save()
685s 
685s > detach(2)
685s 
685s > g.data.attach(ddp)
685s 
685s > ls(2)
685s [1] "m1" "m2"
685s 
685s > system.time(print(dim(m1)))
685s [1] 5000 1000
685s    user  system elapsed 
685s   0.071   0.016   0.088 
685s 
685s > system.time(print(dim(m1)))
685s [1] 5000 1000
685s    user  system elapsed 
685s       0       0       0 
685s 
685s > find("m1")
685s [1] "newdira591a6affc9"
685s 
685s > assign("m3", m1 * 10, 2)
685s 
685s > g.data.save()
686s 
686s > detach(2)
686s 
686s > mym2 <- g.data.get("m2", ddp)
686s 
686s > g.data.put("m4", matrix(1:12, 3, 4), ddp)
686s 
686s > unlink(ddp, recursive = TRUE)
686s 
686s > ddp <- tempfile("newdir")
686s 
686s > y <- list(m1 = 1:1000, m2 = 2:1001)
686s 
686s > attach(y)
686s 
686s > search()[1:3]
686s [1] ".GlobalEnv"     "y"              "package:g.data"
686s 
686s > ls(2)
686s [1] "m1" "m2"
686s 
686s > g.data.save(ddp)
686s 
686s > detach(2)
686s 
686s > unlink(ddp, recursive = TRUE)
686s Warning message:
686s In g.data.attach(ddp) : New DDP: /tmp/RtmpSsSu6y/newdira591a6affc9
686s > 
687s autopkgtest [06:00:40]: test run-unit-test: -----------------------]
687s run-unit-test        PASS
687s autopkgtest [06:00:40]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
687s autopkgtest [06:00:40]: test pkg-r-autopkgtest: preparing testbed
689s Note, using file '/tmp/autopkgtest.chpLRS/3-autopkgtest-satdep.dsc' to get the build dependencies
689s Reading package lists...
689s Building dependency tree...
689s Reading state information...
690s Starting pkgProblemResolver with broken count: 0
690s Starting 2 pkgProblemResolver with broken count: 0
690s Done
690s The following NEW packages will be installed:
690s   dctrl-tools gfortran gfortran-13 gfortran-13-x86-64-linux-gnu
690s   gfortran-x86-64-linux-gnu icu-devtools libblas-dev libbz2-dev
690s   libgfortran-13-dev libicu-dev libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev
690s   liblapack-dev liblzma-dev libncurses-dev libpcre2-16-0 libpcre2-32-0
690s   libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev
690s   pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
690s 0 upgraded, 29 newly installed, 0 to remove and 0 not upgraded.
690s Need to get 33.6 MB of archives.
690s After this operation, 130 MB of additional disk space will be used.
690s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB]
690s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB]
690s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB]
690s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB]
690s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B]
690s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B]
690s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB]
690s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB]
690s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB]
690s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB]
690s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB]
690s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B]
690s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B]
690s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB]
691s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB]
691s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB]
691s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB]
691s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B]
691s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB]
691s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB]
691s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB]
691s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB]
691s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB]
691s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB]
691s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB]
691s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B]
691s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB]
691s Get:28 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B]
691s Get:29 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
691s Fetched 33.6 MB in 0s (83.5 MB/s)
691s Selecting previously unselected package dctrl-tools.
691s (Reading database ... 
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(Reading database ... 76407 files and directories currently installed.)
691s Preparing to unpack .../00-dctrl-tools_2.24-3build2_amd64.deb ...
691s Unpacking dctrl-tools (2.24-3build2) ...
691s Selecting previously unselected package libgfortran-13-dev:amd64.
691s Preparing to unpack .../01-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ...
691s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ...
691s Selecting previously unselected package gfortran-13-x86-64-linux-gnu.
691s Preparing to unpack .../02-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ...
691s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
691s Selecting previously unselected package gfortran-13.
691s Preparing to unpack .../03-gfortran-13_13.2.0-17ubuntu2_amd64.deb ...
691s Unpacking gfortran-13 (13.2.0-17ubuntu2) ...
691s Selecting previously unselected package gfortran-x86-64-linux-gnu.
691s Preparing to unpack .../04-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ...
691s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
691s Selecting previously unselected package gfortran.
691s Preparing to unpack .../05-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ...
691s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
691s Selecting previously unselected package icu-devtools.
691s Preparing to unpack .../06-icu-devtools_74.2-1ubuntu1_amd64.deb ...
691s Unpacking icu-devtools (74.2-1ubuntu1) ...
691s Selecting previously unselected package libblas-dev:amd64.
691s Preparing to unpack .../07-libblas-dev_3.12.0-3_amd64.deb ...
691s Unpacking libblas-dev:amd64 (3.12.0-3) ...
691s Selecting previously unselected package libbz2-dev:amd64.
691s Preparing to unpack .../08-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ...
691s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ...
691s Selecting previously unselected package libicu-dev:amd64.
691s Preparing to unpack .../09-libicu-dev_74.2-1ubuntu1_amd64.deb ...
691s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ...
692s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
692s Preparing to unpack .../10-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ...
692s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ...
692s Selecting previously unselected package libjpeg8-dev:amd64.
692s Preparing to unpack .../11-libjpeg8-dev_8c-2ubuntu11_amd64.deb ...
692s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ...
692s Selecting previously unselected package libjpeg-dev:amd64.
692s Preparing to unpack .../12-libjpeg-dev_8c-2ubuntu11_amd64.deb ...
692s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ...
692s Selecting previously unselected package liblapack-dev:amd64.
692s Preparing to unpack .../13-liblapack-dev_3.12.0-3_amd64.deb ...
692s Unpacking liblapack-dev:amd64 (3.12.0-3) ...
692s Selecting previously unselected package libncurses-dev:amd64.
692s Preparing to unpack .../14-libncurses-dev_6.4+20240113-1ubuntu1_amd64.deb ...
692s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ...
692s Selecting previously unselected package libpcre2-16-0:amd64.
692s Preparing to unpack .../15-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ...
692s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ...
692s Selecting previously unselected package libpcre2-32-0:amd64.
692s Preparing to unpack .../16-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ...
692s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ...
692s Selecting previously unselected package libpcre2-posix3:amd64.
692s Preparing to unpack .../17-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ...
692s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ...
692s Selecting previously unselected package libpcre2-dev:amd64.
692s Preparing to unpack .../18-libpcre2-dev_10.42-4ubuntu1_amd64.deb ...
692s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ...
692s Selecting previously unselected package libpkgconf3:amd64.
692s Preparing to unpack .../19-libpkgconf3_1.8.1-2_amd64.deb ...
692s Unpacking libpkgconf3:amd64 (1.8.1-2) ...
692s Selecting previously unselected package zlib1g-dev:amd64.
692s Preparing to unpack .../20-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ...
692s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ...
692s Selecting previously unselected package libpng-dev:amd64.
692s Preparing to unpack .../21-libpng-dev_1.6.43-1_amd64.deb ...
692s Unpacking libpng-dev:amd64 (1.6.43-1) ...
692s Selecting previously unselected package libreadline-dev:amd64.
692s Preparing to unpack .../22-libreadline-dev_8.2-3_amd64.deb ...
692s Unpacking libreadline-dev:amd64 (8.2-3) ...
692s Selecting previously unselected package pkgconf-bin.
692s Preparing to unpack .../23-pkgconf-bin_1.8.1-2_amd64.deb ...
692s Unpacking pkgconf-bin (1.8.1-2) ...
692s Selecting previously unselected package pkgconf:amd64.
692s Preparing to unpack .../24-pkgconf_1.8.1-2_amd64.deb ...
692s Unpacking pkgconf:amd64 (1.8.1-2) ...
692s Selecting previously unselected package pkg-config:amd64.
692s Preparing to unpack .../25-pkg-config_1.8.1-2_amd64.deb ...
692s Unpacking pkg-config:amd64 (1.8.1-2) ...
692s Selecting previously unselected package liblzma-dev:amd64.
692s Preparing to unpack .../26-liblzma-dev_5.4.5-0.3_amd64.deb ...
692s Unpacking liblzma-dev:amd64 (5.4.5-0.3) ...
692s Selecting previously unselected package r-base-dev.
692s Preparing to unpack .../27-r-base-dev_4.3.2-1build1_all.deb ...
692s Unpacking r-base-dev (4.3.2-1build1) ...
692s Selecting previously unselected package pkg-r-autopkgtest.
692s Preparing to unpack .../28-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
692s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
692s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ...
692s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ...
692s Setting up libreadline-dev:amd64 (8.2-3) ...
692s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu1) ...
692s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu1) ...
692s Setting up libpkgconf3:amd64 (1.8.1-2) ...
692s Setting up icu-devtools (74.2-1ubuntu1) ...
692s Setting up pkgconf-bin (1.8.1-2) ...
692s Setting up liblzma-dev:amd64 (5.4.5-0.3) ...
692s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ...
692s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu1) ...
692s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ...
692s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ...
692s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ...
692s Setting up libblas-dev:amd64 (3.12.0-3) ...
692s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
692s Setting up dctrl-tools (2.24-3build2) ...
692s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ...
692s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ...
692s Setting up libpng-dev:amd64 (1.6.43-1) ...
692s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ...
692s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
692s Setting up pkgconf:amd64 (1.8.1-2) ...
692s Setting up gfortran-13 (13.2.0-17ubuntu2) ...
692s Setting up liblapack-dev:amd64 (3.12.0-3) ...
692s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
692s Setting up pkg-config:amd64 (1.8.1-2) ...
692s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
692s Setting up gfortran (4:13.2.0-7ubuntu1) ...
692s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
692s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
692s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
692s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
692s Setting up r-base-dev (4.3.2-1build1) ...
692s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
692s Processing triggers for libc-bin (2.39-0ubuntu2) ...
692s Processing triggers for man-db (2.12.0-3) ...
693s Processing triggers for install-info (7.1-3) ...
697s Reading package lists...
697s Building dependency tree...
697s Reading state information...
697s Starting pkgProblemResolver with broken count: 0
697s Starting 2 pkgProblemResolver with broken count: 0
697s Done
698s The following NEW packages will be installed:
698s   autopkgtest-satdep
698s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
698s Need to get 0 B/700 B of archives.
698s After this operation, 0 B of additional disk space will be used.
698s Get:1 /tmp/autopkgtest.chpLRS/4-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B]
698s Selecting previously unselected package autopkgtest-satdep.
698s (Reading database ... 
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698s Preparing to unpack .../4-autopkgtest-satdep.deb ...
698s Unpacking autopkgtest-satdep (0) ...
698s Setting up autopkgtest-satdep (0) ...
700s (Reading database ... 77136 files and directories currently installed.)
700s Removing autopkgtest-satdep (0) ...
700s autopkgtest [06:00:53]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
700s autopkgtest [06:00:53]: test pkg-r-autopkgtest: [-----------------------
700s Test: Try to load the R library g.data
700s 
700s R version 4.3.2 (2023-10-31) -- "Eye Holes"
700s Copyright (C) 2023 The R Foundation for Statistical Computing
700s Platform: x86_64-pc-linux-gnu (64-bit)
700s 
700s R is free software and comes with ABSOLUTELY NO WARRANTY.
700s You are welcome to redistribute it under certain conditions.
700s Type 'license()' or 'licence()' for distribution details.
700s 
700s R is a collaborative project with many contributors.
700s Type 'contributors()' for more information and
700s 'citation()' on how to cite R or R packages in publications.
700s 
700s Type 'demo()' for some demos, 'help()' for on-line help, or
700s 'help.start()' for an HTML browser interface to help.
700s Type 'q()' to quit R.
700s 
700s > library('g.data')
700s > 
700s > 
700s Other tests are currently unsupported!
700s They will be progressively added.
700s autopkgtest [06:00:53]: test pkg-r-autopkgtest: -----------------------]
701s autopkgtest [06:00:54]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
701s pkg-r-autopkgtest    PASS
701s autopkgtest [06:00:54]: @@@@@@@@@@@@@@@@@@@@ summary
701s run-unit-test        PASS
701s pkg-r-autopkgtest    PASS
718s Creating nova instance adt-noble-i386-r-cran-g.data-20240321-054913-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)...