0s autopkgtest [03:39:14]: starting date and time: 2024-03-22 03:39:14+0000 0s autopkgtest [03:39:14]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [03:39:14]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.s58tuxrq/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base --apt-upgrade r-bioc-progeny --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-65.secgroup --name adt-noble-i386-r-bioc-progeny-20240322-033914-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 393s autopkgtest [03:45:47]: testbed dpkg architecture: amd64 393s autopkgtest [03:45:47]: testbed apt version: 2.7.12 393s autopkgtest [03:45:47]: test architecture: i386 393s autopkgtest [03:45:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 394s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 394s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [493 kB] 394s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3757 kB] 394s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 394s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 394s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [696 kB] 394s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [460 kB] 394s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 394s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 394s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 394s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 394s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1277 kB] 394s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4267 kB] 394s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 394s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 394s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 394s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 397s Fetched 11.3 MB in 1s (7750 kB/s) 397s Reading package lists... 399s Reading package lists... 400s Building dependency tree... 400s Reading state information... 400s Calculating upgrade... 401s The following packages will be upgraded: 401s cloud-init fonts-ubuntu-console python3-markupsafe 401s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 401s Need to get 629 kB of archives. 401s After this operation, 11.3 kB disk space will be freed. 401s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 401s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 python3-markupsafe amd64 2.1.5-1build1 [12.6 kB] 401s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 cloud-init all 24.1.2-0ubuntu1 [597 kB] 401s Preconfiguring packages ... 401s Fetched 629 kB in 0s (18.1 MB/s) 401s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 401s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 401s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 401s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_amd64.deb ... 401s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 401s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 402s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 402s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 402s Setting up cloud-init (24.1.2-0ubuntu1) ... 403s Setting up python3-markupsafe (2.1.5-1build1) ... 403s Processing triggers for man-db (2.12.0-3) ... 404s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 404s Reading package lists... 405s Building dependency tree... 405s Reading state information... 405s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 405s sh: Attempting to set up Debian/Ubuntu apt sources automatically 405s sh: Distribution appears to be Ubuntu 407s Reading package lists... 407s Building dependency tree... 407s Reading state information... 407s eatmydata is already the newest version (131-1). 407s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 407s Reading package lists... 408s Building dependency tree... 408s Reading state information... 408s dbus is already the newest version (1.14.10-4ubuntu1). 408s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 408s Reading package lists... 408s Building dependency tree... 408s Reading state information... 409s rng-tools-debian is already the newest version (2.4). 409s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 409s Reading package lists... 409s Building dependency tree... 409s Reading state information... 410s The following packages will be REMOVED: 410s cloud-init* python3-configobj* python3-debconf* 410s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 410s After this operation, 3256 kB disk space will be freed. 410s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 410s Removing cloud-init (24.1.2-0ubuntu1) ... 411s Removing python3-configobj (5.0.8-3) ... 411s Removing python3-debconf (1.5.86) ... 411s Processing triggers for man-db (2.12.0-3) ... 411s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 411s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 412s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 412s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 412s invoke-rc.d: policy-rc.d denied execution of try-restart. 412s Reading package lists... 412s Building dependency tree... 412s Reading state information... 413s linux-generic is already the newest version (6.8.0-11.11+1). 413s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 413s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 413s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 413s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 415s Reading package lists... 415s Reading package lists... 415s Building dependency tree... 415s Reading state information... 416s Calculating upgrade... 416s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 416s Reading package lists... 416s Building dependency tree... 416s Reading state information... 416s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 417s autopkgtest [03:46:11]: rebooting testbed after setup commands that affected boot 434s autopkgtest [03:46:28]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 434s autopkgtest [03:46:28]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-progeny 435s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-progeny 1.24.0+ds-1 (dsc) [2213 B] 435s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-progeny 1.24.0+ds-1 (tar) [9768 kB] 435s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-progeny 1.24.0+ds-1 (diff) [3620 B] 436s gpgv: Signature made Thu Nov 30 07:58:53 2023 UTC 436s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 436s gpgv: issuer "tillea@rki.de" 436s gpgv: Can't check signature: No public key 436s dpkg-source: warning: cannot verify inline signature for ./r-bioc-progeny_1.24.0+ds-1.dsc: no acceptable signature found 436s autopkgtest [03:46:30]: testing package r-bioc-progeny version 1.24.0+ds-1 436s autopkgtest [03:46:30]: build not needed 437s autopkgtest [03:46:31]: test pkg-r-autopkgtest: preparing testbed 444s Note, using file '/tmp/autopkgtest.QD4RkX/1-autopkgtest-satdep.dsc' to get the build dependencies 445s Reading package lists... 445s Building dependency tree... 445s Reading state information... 445s Starting pkgProblemResolver with broken count: 0 445s Starting 2 pkgProblemResolver with broken count: 0 445s Done 445s The following NEW packages will be installed: 445s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 445s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 445s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 445s g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 445s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13 445s gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 445s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 445s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 445s libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 libfontconfig1 445s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 445s libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl libisl23 445s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 445s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 445s libjs-highlight.js libjs-jquery libjs-jquery-datatables 445s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 445s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 445s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 445s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 445s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 445s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 445s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 445s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libquadmath0 445s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 445s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 445s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 445s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 445s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 445s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 445s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 445s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocparallel 445s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-decoupler 445s r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 445s r-bioc-genomeinfodbdata r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 445s r-bioc-matrixgenerics r-bioc-progeny r-bioc-s4arrays r-bioc-s4vectors 445s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 445s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-backports 445s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 445s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 445s r-cran-bslib r-cran-cachem r-cran-callr r-cran-catools r-cran-cellranger 445s r-cran-cli r-cran-clipr r-cran-cluster r-cran-codetools r-cran-colorspace 445s r-cran-colourpicker r-cran-commonmark r-cran-cowplot r-cran-cpp11 445s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table r-cran-dbi 445s r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-diffobj r-cran-digest 445s r-cran-dotcall64 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-evaluate 445s r-cran-fansi r-cran-farver r-cran-fastdummies r-cran-fastmap r-cran-filelock 445s r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-formatr r-cran-fs 445s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 445s r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges 445s r-cran-globals r-cran-glue r-cran-goftest r-cran-gplots r-cran-gridextra 445s r-cran-gtable r-cran-gtools r-cran-here r-cran-highr r-cran-hms 445s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 445s r-cran-igraph r-cran-irlba r-cran-isoband r-cran-jquerylib r-cran-jsonlite 445s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 445s r-cran-lattice r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 445s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-magrittr r-cran-mass 445s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 445s r-cran-miniui r-cran-munsell r-cran-nlme r-cran-openssl r-cran-parallelly 445s r-cran-patchwork r-cran-pbapply r-cran-pheatmap r-cran-pillar 445s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 445s r-cran-plogr r-cran-plotly r-cran-plyr r-cran-png r-cran-polyclip 445s r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 445s r-cran-progressr r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 445s r-cran-rann r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy 445s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress 445s r-cran-rcpptoml r-cran-rcurl r-cran-readr r-cran-readxl r-cran-rematch 445s r-cran-rematch2 r-cran-reshape2 r-cran-reticulate r-cran-rlang 445s r-cran-rmarkdown r-cran-rocr r-cran-rprojroot r-cran-rspectra r-cran-rsqlite 445s r-cran-rtsne r-cran-sass r-cran-scales r-cran-scattermore r-cran-sctransform 445s r-cran-seurat r-cran-seuratobject r-cran-shiny r-cran-shinyjs r-cran-sitmo 445s r-cran-snow r-cran-sourcetools r-cran-sp r-cran-spam r-cran-spatstat.data 445s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 445s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stringi r-cran-stringr 445s r-cran-survival r-cran-sys r-cran-tensor r-cran-testthat r-cran-tibble 445s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 445s r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo 445s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 445s r-cran-zoo rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 445s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 445s zlib1g-dev 445s 0 upgraded, 378 newly installed, 0 to remove and 0 not upgraded. 445s Need to get 512 MB of archives. 445s After this operation, 1498 MB of additional disk space will be used. 445s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 445s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 446s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 446s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 446s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 446s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 446s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 446s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 446s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 446s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 446s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 446s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 446s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 446s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 446s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 446s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 446s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 446s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 446s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 446s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 446s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 446s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 446s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 446s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 446s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 446s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 446s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 446s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 446s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 446s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 446s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 446s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 446s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 446s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 446s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 446s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 446s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 446s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 446s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 446s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 446s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 446s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 446s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 446s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 446s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 446s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 446s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 446s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 446s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 446s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 446s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 446s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 javascript-common all 11+nmu1 [5936 B] 446s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 446s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 446s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 446s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 446s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 446s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libboost1.83-dev amd64 1.83.0-2ubuntu1 [15.3 MB] 446s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libboost-dev amd64 1.83.0.1ubuntu2 [4308 B] 446s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 446s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 446s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 446s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 446s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 446s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 446s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 446s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 446s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 446s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 446s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 446s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 446s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 446s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 446s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 446s Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 446s Get:76 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 446s Get:77 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 446s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 446s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 446s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 446s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 446s Get:82 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 446s Get:83 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 446s Get:84 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 446s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 446s Get:86 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 446s Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 446s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 446s Get:89 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 446s Get:90 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 446s Get:91 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 446s Get:92 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 446s Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 libkpathsea6 amd64 2023.20230311.66589-9 [62.9 kB] 446s Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 446s Get:95 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 446s Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 447s Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 liblua5.4-0 amd64 5.4.6-3 [166 kB] 447s Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 447s Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 447s Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 447s Get:101 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 447s Get:102 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 447s Get:103 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 447s Get:104 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 447s Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 447s Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 447s Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 447s Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 447s Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 447s Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 447s Get:111 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 447s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 447s Get:113 http://ftpmaster.internal/ubuntu noble/universe amd64 libpotrace0 amd64 1.16-2 [17.2 kB] 447s Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libptexenc1 amd64 2023.20230311.66589-9 [40.4 kB] 447s Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 447s Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 447s Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 447s Get:118 http://ftpmaster.internal/ubuntu noble/main amd64 libsynctex2 amd64 2023.20230311.66589-9 [59.5 kB] 447s Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 447s Get:120 http://ftpmaster.internal/ubuntu noble/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 447s Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 libtexlua53-5 amd64 2023.20230311.66589-9 [122 kB] 447s Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 447s Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 447s Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 447s Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 447s Get:126 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 447s Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] 447s Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 447s Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 libxmu6 amd64 2:1.1.3-3 [49.6 kB] 447s Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 libxpm4 amd64 1:3.5.17-1 [35.9 kB] 447s Get:131 http://ftpmaster.internal/ubuntu noble/main amd64 libxaw7 amd64 2:1.0.14-1 [191 kB] 447s Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 libxi6 amd64 2:1.8.1-1 [32.4 kB] 447s Get:133 http://ftpmaster.internal/ubuntu noble/universe amd64 libzzip-0-13 amd64 0.13.72+dfsg.1-1.1 [27.0 kB] 447s Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 447s Get:135 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 447s Get:136 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 447s Get:137 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 447s Get:138 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 447s Get:139 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 447s Get:140 http://ftpmaster.internal/ubuntu noble/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 447s Get:141 http://ftpmaster.internal/ubuntu noble/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 447s Get:142 http://ftpmaster.internal/ubuntu noble/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 447s Get:143 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc-data all 3.1.3-1 [92.4 kB] 447s Get:144 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc amd64 3.1.3+ds-2 [26.9 MB] 447s Get:145 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 447s Get:146 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 447s Get:147 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 447s Get:148 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 447s Get:149 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 447s Get:150 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 447s Get:151 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 447s Get:152 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biobase amd64 2.62.0-1 [2136 kB] 447s Get:153 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4vectors amd64 0.40.2+dfsg-1 [2056 kB] 447s Get:154 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-iranges amd64 2.36.0-1 [2252 kB] 447s Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dbi all 1.2.2-1 [823 kB] 447s Get:156 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 447s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 447s Get:158 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 447s Get:159 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 447s Get:160 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 447s Get:161 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 447s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 447s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-blob all 1.2.4-1 [49.8 kB] 447s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 447s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 447s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 447s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 447s Get:168 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 447s Get:169 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 447s Get:170 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rsqlite amd64 2.3.4-1 [1364 kB] 447s Get:171 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-curl amd64 5.2.0+dfsg-1 [188 kB] 447s Get:172 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 447s Get:173 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mime amd64 0.12-1 [35.8 kB] 447s Get:174 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 447s Get:175 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 447s Get:176 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-openssl amd64 2.1.1+dfsg-2 [402 kB] 447s Get:177 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 447s Get:178 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 447s Get:179 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-png amd64 0.1-8-1 [40.5 kB] 447s Get:180 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 447s Get:181 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-xvector amd64 0.42.0-1 [621 kB] 447s Get:182 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 447s Get:183 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1 [793 kB] 447s Get:184 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 447s Get:185 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 447s Get:186 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 447s Get:187 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biostrings amd64 2.70.2+dfsg-1 [13.6 MB] 447s Get:188 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 447s Get:189 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 447s Get:190 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 447s Get:191 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 447s Get:192 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 447s Get:193 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 447s Get:194 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 447s Get:195 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 447s Get:196 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 447s Get:197 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyselect amd64 1.2.0+dfsg-1 [218 kB] 447s Get:198 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 447s Get:199 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 447s Get:200 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 447s Get:201 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 447s Get:202 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 448s Get:203 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 448s Get:204 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB] 448s Get:205 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 448s Get:206 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-formatr all 1.14-1 [152 kB] 448s Get:207 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 448s Get:208 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 448s Get:209 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 448s Get:210 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 448s Get:211 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-codetools all 0.2-19-1 [90.5 kB] 448s Get:212 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 448s Get:213 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocparallel amd64 1.36.0-1 [1347 kB] 448s Get:214 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 448s Get:215 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-digest amd64 0.6.34-1 [186 kB] 448s Get:216 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 448s Get:217 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltools amd64 0.5.7-1 [369 kB] 448s Get:218 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-evaluate all 0.23-1 [90.2 kB] 448s Get:219 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xfun amd64 0.41+dfsg-1 [415 kB] 448s Get:220 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 448s Get:221 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-yaml amd64 2.3.8-1 [108 kB] 448s Get:222 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 448s Get:223 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 448s Get:224 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 448s Get:225 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fs amd64 1.6.3+dfsg-1 [229 kB] 448s Get:226 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 448s Get:227 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sass amd64 0.4.8+dfsg-1 [996 kB] 448s Get:228 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 448s Get:229 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 448s Get:230 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytex all 0.49-1 [141 kB] 448s Get:231 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 448s Get:232 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 448s Get:233 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 448s Get:234 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 448s Get:235 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-promises amd64 1.2.1+dfsg-1 [284 kB] 448s Get:236 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httpuv amd64 1.6.14+dfsg-1 [510 kB] 448s Get:237 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 448s Get:238 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 448s Get:239 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 448s Get:240 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 448s Get:241 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 448s Get:242 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 448s Get:243 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 448s Get:244 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 448s Get:245 http://ftpmaster.internal/ubuntu noble/universe amd64 tex-common all 6.18 [32.8 kB] 448s Get:246 http://ftpmaster.internal/ubuntu noble/main amd64 t1utils amd64 1.41-4build2 [61.3 kB] 448s Get:247 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-binaries amd64 2023.20230311.66589-9 [8529 kB] 448s Get:248 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-base all 2023.20240207-1 [21.7 MB] 448s Get:249 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-latex-base all 2023.20240207-1 [1238 kB] 448s Get:250 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 449s Get:251 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 449s Get:252 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml amd64 3.99-0.16.1-1 [1733 kB] 449s Get:253 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 449s Get:254 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 449s Get:255 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 449s Get:256 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml2 amd64 1.3.6-1 [322 kB] 449s Get:257 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 449s Get:258 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-backports amd64 1.4.1-1 [101 kB] 449s Get:259 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 449s Get:260 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lattice amd64 0.22-5-1 [1342 kB] 449s Get:261 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrix amd64 1.6-5-1 [3830 kB] 449s Get:262 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-decoupler all 2.8.0+dfsg-2 [2029 kB] 449s Get:263 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrixstats amd64 1.2.0-1 [488 kB] 449s Get:264 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 449s Get:265 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-abind all 1.4-5-2 [63.6 kB] 449s Get:266 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4arrays amd64 1.2.0+dfsg-1 [501 kB] 449s Get:267 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-sparsearray amd64 1.2.4+dfsg-1 [1195 kB] 449s Get:268 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-delayedarray amd64 0.28.0+dfsg-1 [1787 kB] 449s Get:269 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomicranges amd64 1.54.1+dfsg-1 [1823 kB] 449s Get:270 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 449s Get:271 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-locfit amd64 1.5-9.8-1 [513 kB] 449s Get:272 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 449s Get:273 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 449s Get:274 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mass amd64 7.3-60.0.1-1 [1119 kB] 449s Get:275 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nlme amd64 3.1.164-1 [2260 kB] 449s Get:276 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 449s Get:277 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-farver amd64 2.1.1-1 [1353 kB] 449s Get:278 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 449s Get:279 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 449s Get:280 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-munsell all 0.5.0-2build1 [208 kB] 449s Get:281 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 449s Get:282 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 449s Get:283 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 449s Get:284 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 449s Get:285 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpparmadillo amd64 0.12.8.0.0-1 [862 kB] 449s Get:286 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-deseq2 amd64 1.42.0+dfsg-1 [1226 kB] 449s Get:287 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggrepel amd64 0.9.5-1 [254 kB] 449s Get:288 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 449s Get:289 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 449s Get:290 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 449s Get:291 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-progeny all 1.24.0+ds-1 [8872 kB] 449s Get:292 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-singlecellexperiment all 1.24.0+ds-1 [828 kB] 449s Get:293 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-brio amd64 1.1.4-1 [37.9 kB] 449s Get:294 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 449s Get:295 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-processx amd64 3.8.3-1 [346 kB] 449s Get:296 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-callr all 3.7.3-2 [425 kB] 449s Get:297 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 449s Get:298 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rematch all 2.0.0-1 [18.3 kB] 449s Get:299 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cellranger all 1.1.0-3 [102 kB] 449s Get:300 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-clipr all 0.8.0-1 [53.5 kB] 449s Get:301 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cluster amd64 2.1.6-1 [554 kB] 449s Get:302 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 449s Get:303 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 449s Get:304 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 449s Get:305 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 449s Get:306 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 449s Get:307 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 449s Get:308 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 449s Get:309 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-data.table amd64 1.14.10+dfsg-1 [1837 kB] 449s Get:310 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-deldir amd64 2.0-4-1 [270 kB] 449s Get:311 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 449s Get:312 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 449s Get:313 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 449s Get:314 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 449s Get:315 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 449s Get:316 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastdummies all 1.7.3-2 [49.9 kB] 449s Get:317 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-survival amd64 3.5-8-1 [6120 kB] 450s Get:318 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fitdistrplus all 1.1-11-1 [1902 kB] 450s Get:319 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fnn amd64 1.1.4-1 [122 kB] 450s Get:320 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-globals all 0.16.2-1 [117 kB] 450s Get:321 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 450s Get:322 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-parallelly amd64 1.37.1-1 [365 kB] 450s Get:323 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-future all 1.33.1+dfsg-1 [634 kB] 450s Get:324 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-future.apply all 1.11.1+dfsg-1 [171 kB] 450s Get:325 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 450s Get:326 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gdata all 3.0.0-1 [483 kB] 450s Get:327 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 450s Get:328 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 450s Get:329 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-kernsmooth amd64 2.23-22-1 [91.7 kB] 450s Get:330 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gplots all 3.1.3.1-1 [589 kB] 450s Get:331 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 450s Get:332 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 450s Get:333 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 450s Get:334 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-igraph amd64 1.6.0-1 [4399 kB] 450s Get:335 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-irlba amd64 2.3.5.1-2 [294 kB] 450s Get:336 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 450s Get:337 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-reticulate amd64 1.35.0+dfsg-1 [1195 kB] 450s Get:338 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 450s Get:339 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 450s Get:340 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 450s Get:341 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-patchwork all 1.2.0-1 [3161 kB] 450s Get:342 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 450s Get:343 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 450s Get:344 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 450s Get:345 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgload all 1.3.4-1 [207 kB] 450s Get:346 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 450s Get:347 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-polyclip amd64 1.10-6-1 [113 kB] 450s Get:348 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 450s Get:349 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 450s Get:350 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rann amd64 2.6.1-1build2 [41.9 kB] 450s Get:351 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 450s Get:352 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcppeigen amd64 0.3.3.9.4-1 [1189 kB] 450s Get:353 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 450s Get:354 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 450s Get:355 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 450s Get:356 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vroom amd64 1.6.5-1 [848 kB] 450s Get:357 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-readr amd64 2.1.5-1 [766 kB] 450s Get:358 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-readxl amd64 1.4.3-1 [736 kB] 450s Get:359 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 450s Get:360 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rocr all 1.0-11-2build1 [446 kB] 450s Get:361 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rspectra amd64 0.16-1-1 [413 kB] 450s Get:362 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 450s Get:363 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 450s Get:364 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 450s Get:365 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sp amd64 1:2.1-2+dfsg-1 [1447 kB] 450s Get:366 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spam amd64 2.10-0-1 [2765 kB] 450s Get:367 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-seuratobject amd64 5.0.1-1 [1734 kB] 450s Get:368 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spatstat.utils amd64 3.0-4-1 [361 kB] 450s Get:369 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spatstat.data all 3.0-4-1 [4090 kB] 450s Get:370 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spatstat.geom amd64 3.2-8-1 [3817 kB] 450s Get:371 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spatstat.random amd64 3.2-2-1 [1140 kB] 450s Get:372 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 450s Get:373 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 450s Get:374 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-spatstat.explore amd64 3.2-5-1 [3283 kB] 450s Get:375 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-uwot amd64 0.1.16-2 [642 kB] 450s Get:376 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-seurat amd64 5.0.1-1 [3543 kB] 450s Get:377 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 450s Get:378 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-testthat amd64 3.2.1-1 [1684 kB] 451s Preconfiguring packages ... 451s Fetched 512 MB in 5s (104 MB/s) 451s Selecting previously unselected package libc-dev-bin. 452s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 452s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 452s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 452s Selecting previously unselected package linux-libc-dev:amd64. 452s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 452s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 452s Selecting previously unselected package libcrypt-dev:amd64. 452s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 452s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 452s Selecting previously unselected package libtirpc-dev:amd64. 452s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 452s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 452s Selecting previously unselected package libnsl-dev:amd64. 452s Preparing to unpack .../004-libnsl-dev_1.3.0-3_amd64.deb ... 452s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 452s Selecting previously unselected package rpcsvc-proto. 452s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 452s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 452s Selecting previously unselected package libc6-dev:amd64. 452s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_amd64.deb ... 452s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 452s Selecting previously unselected package libisl23:amd64. 452s Preparing to unpack .../007-libisl23_0.26-3_amd64.deb ... 452s Unpacking libisl23:amd64 (0.26-3) ... 452s Selecting previously unselected package libmpc3:amd64. 452s Preparing to unpack .../008-libmpc3_1.3.1-1_amd64.deb ... 452s Unpacking libmpc3:amd64 (1.3.1-1) ... 452s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 452s Preparing to unpack .../009-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 452s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 453s Selecting previously unselected package cpp-13. 453s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 453s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 453s Selecting previously unselected package cpp-x86-64-linux-gnu. 453s Preparing to unpack .../011-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 453s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 453s Selecting previously unselected package cpp. 453s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 453s Unpacking cpp (4:13.2.0-7ubuntu1) ... 453s Selecting previously unselected package libcc1-0:amd64. 453s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libgomp1:amd64. 453s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libitm1:amd64. 453s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libatomic1:amd64. 453s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libasan8:amd64. 453s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package liblsan0:amd64. 453s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libtsan2:amd64. 453s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libubsan1:amd64. 453s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libhwasan0:amd64. 453s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libquadmath0:amd64. 453s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 453s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 453s Selecting previously unselected package libgcc-13-dev:amd64. 453s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 453s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 453s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 453s Preparing to unpack .../024-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 453s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 454s Selecting previously unselected package gcc-13. 454s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 454s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 454s Selecting previously unselected package gcc-x86-64-linux-gnu. 454s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 454s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 454s Selecting previously unselected package gcc. 454s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 454s Unpacking gcc (4:13.2.0-7ubuntu1) ... 454s Selecting previously unselected package libstdc++-13-dev:amd64. 454s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 454s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 454s Selecting previously unselected package g++-13-x86-64-linux-gnu. 454s Preparing to unpack .../029-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 454s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 454s Selecting previously unselected package g++-13. 454s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_amd64.deb ... 454s Unpacking g++-13 (13.2.0-17ubuntu2) ... 454s Selecting previously unselected package g++-x86-64-linux-gnu. 454s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 454s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 454s Selecting previously unselected package g++. 454s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 454s Unpacking g++ (4:13.2.0-7ubuntu1) ... 454s Selecting previously unselected package build-essential. 454s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 454s Unpacking build-essential (12.10ubuntu1) ... 454s Selecting previously unselected package dctrl-tools. 454s Preparing to unpack .../034-dctrl-tools_2.24-3build2_amd64.deb ... 454s Unpacking dctrl-tools (2.24-3build2) ... 454s Selecting previously unselected package fonts-dejavu-mono. 454s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 454s Unpacking fonts-dejavu-mono (2.37-8) ... 454s Selecting previously unselected package fonts-dejavu-core. 454s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 454s Unpacking fonts-dejavu-core (2.37-8) ... 454s Selecting previously unselected package fontconfig-config. 454s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 455s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 455s Selecting previously unselected package libfontconfig1:amd64. 455s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 455s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 455s Selecting previously unselected package fontconfig. 455s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 455s Unpacking fontconfig (2.15.0-1ubuntu1) ... 455s Selecting previously unselected package fonts-font-awesome. 455s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 455s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 455s Selecting previously unselected package fonts-glyphicons-halflings. 455s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 455s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 455s Selecting previously unselected package fonts-lmodern. 455s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 455s Unpacking fonts-lmodern (2.005-1) ... 455s Selecting previously unselected package fonts-mathjax. 455s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 455s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 455s Selecting previously unselected package libgfortran5:amd64. 455s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 455s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 455s Selecting previously unselected package libgfortran-13-dev:amd64. 455s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 455s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 455s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 455s Preparing to unpack .../046-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 455s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 455s Selecting previously unselected package gfortran-13. 455s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 455s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 455s Selecting previously unselected package gfortran-x86-64-linux-gnu. 455s Preparing to unpack .../048-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 455s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 455s Selecting previously unselected package gfortran. 455s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 455s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 455s Selecting previously unselected package icu-devtools. 455s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_amd64.deb ... 455s Unpacking icu-devtools (74.2-1ubuntu1) ... 455s Selecting previously unselected package javascript-common. 455s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 455s Unpacking javascript-common (11+nmu1) ... 455s Selecting previously unselected package libio-string-perl. 455s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 455s Unpacking libio-string-perl (1.08-4) ... 455s Selecting previously unselected package liblatex-tounicode-perl. 455s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 455s Unpacking liblatex-tounicode-perl (0.54-2) ... 456s Selecting previously unselected package libbibtex-parser-perl. 456s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 456s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 456s Selecting previously unselected package libblas3:amd64. 456s Preparing to unpack .../055-libblas3_3.12.0-3_amd64.deb ... 456s Unpacking libblas3:amd64 (3.12.0-3) ... 456s Selecting previously unselected package libblas-dev:amd64. 456s Preparing to unpack .../056-libblas-dev_3.12.0-3_amd64.deb ... 456s Unpacking libblas-dev:amd64 (3.12.0-3) ... 456s Selecting previously unselected package libboost1.83-dev:amd64. 456s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_amd64.deb ... 456s Unpacking libboost1.83-dev:amd64 (1.83.0-2ubuntu1) ... 458s Selecting previously unselected package libboost-dev:amd64. 458s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_amd64.deb ... 458s Unpacking libboost-dev:amd64 (1.83.0.1ubuntu2) ... 458s Selecting previously unselected package libbz2-dev:amd64. 458s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 458s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 458s Selecting previously unselected package libpixman-1-0:amd64. 458s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_amd64.deb ... 458s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 458s Selecting previously unselected package libxcb-render0:amd64. 458s Preparing to unpack .../061-libxcb-render0_1.15-1_amd64.deb ... 458s Unpacking libxcb-render0:amd64 (1.15-1) ... 458s Selecting previously unselected package libxcb-shm0:amd64. 458s Preparing to unpack .../062-libxcb-shm0_1.15-1_amd64.deb ... 458s Unpacking libxcb-shm0:amd64 (1.15-1) ... 458s Selecting previously unselected package libxrender1:amd64. 458s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 458s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 458s Selecting previously unselected package libcairo2:amd64. 458s Preparing to unpack .../064-libcairo2_1.18.0-1_amd64.deb ... 458s Unpacking libcairo2:amd64 (1.18.0-1) ... 458s Selecting previously unselected package libdatrie1:amd64. 458s Preparing to unpack .../065-libdatrie1_0.2.13-3_amd64.deb ... 458s Unpacking libdatrie1:amd64 (0.2.13-3) ... 458s Selecting previously unselected package libdeflate0:amd64. 458s Preparing to unpack .../066-libdeflate0_1.19-1_amd64.deb ... 458s Unpacking libdeflate0:amd64 (1.19-1) ... 458s Selecting previously unselected package libgraphite2-3:amd64. 458s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_amd64.deb ... 458s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 458s Selecting previously unselected package libharfbuzz0b:amd64. 458s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_amd64.deb ... 458s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 459s Selecting previously unselected package x11-common. 459s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 459s Unpacking x11-common (1:7.7+23ubuntu2) ... 459s Selecting previously unselected package libice6:amd64. 459s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_amd64.deb ... 459s Unpacking libice6:amd64 (2:1.0.10-1build2) ... 459s Selecting previously unselected package libicu-dev:amd64. 459s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_amd64.deb ... 459s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ... 459s Selecting previously unselected package libjpeg-turbo8:amd64. 459s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 459s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 459s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 459s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ... 459s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 459s Selecting previously unselected package libjpeg8:amd64. 459s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_amd64.deb ... 459s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 459s Selecting previously unselected package libjpeg8-dev:amd64. 459s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 459s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 459s Selecting previously unselected package libjpeg-dev:amd64. 459s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 459s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 459s Selecting previously unselected package libjs-bootstrap. 459s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 459s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 459s Selecting previously unselected package libjs-popper.js. 459s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 459s Unpacking libjs-popper.js (1.16.1+ds-6) ... 459s Selecting previously unselected package libjs-bootstrap4. 459s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 459s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 459s Selecting previously unselected package libjs-d3. 459s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 459s Unpacking libjs-d3 (3.5.17-4) ... 459s Selecting previously unselected package libjs-es5-shim. 459s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 459s Unpacking libjs-es5-shim (4.6.7-2) ... 459s Selecting previously unselected package libjs-highlight.js. 459s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 459s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 459s Selecting previously unselected package libjs-jquery. 459s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 459s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 460s Selecting previously unselected package libjs-jquery-datatables. 460s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 460s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 460s Selecting previously unselected package libjs-sifter.js. 460s Preparing to unpack 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previously unselected package libpangoft2-1.0-0:amd64. 460s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ... 460s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 460s Selecting previously unselected package libpangocairo-1.0-0:amd64. 460s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ... 460s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 460s Selecting previously unselected package libpaper1:amd64. 460s Preparing to unpack .../103-libpaper1_1.1.29_amd64.deb ... 460s Unpacking libpaper1:amd64 (1.1.29) ... 461s Selecting previously unselected package libpaper-utils. 461s Preparing to unpack .../104-libpaper-utils_1.1.29_amd64.deb ... 461s Unpacking libpaper-utils (1.1.29) ... 461s Selecting previously unselected package libpcre2-16-0:amd64. 461s Preparing to unpack .../105-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ... 461s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 461s Selecting previously unselected package libpcre2-32-0:amd64. 461s Preparing to unpack .../106-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ... 461s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 461s Selecting previously unselected package libpcre2-posix3:amd64. 461s Preparing to unpack .../107-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ... 461s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 461s Selecting previously unselected package libpcre2-dev:amd64. 461s Preparing to unpack .../108-libpcre2-dev_10.42-4ubuntu1_amd64.deb ... 461s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ... 461s Selecting previously unselected package libpkgconf3:amd64. 461s Preparing to unpack .../109-libpkgconf3_1.8.1-2_amd64.deb ... 461s Unpacking libpkgconf3:amd64 (1.8.1-2) ... 461s Selecting previously unselected package zlib1g-dev:amd64. 461s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ... 461s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 461s Selecting previously unselected package libpng-dev:amd64. 461s 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(2.1-6.1ubuntu1) ... 461s Selecting previously unselected package libwebp7:amd64. 461s Preparing to unpack .../122-libwebp7_1.3.2-0.4_amd64.deb ... 461s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 461s Selecting previously unselected package libtiff6:amd64. 461s Preparing to unpack .../123-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 461s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 461s Selecting previously unselected package libxft2:amd64. 461s Preparing to unpack .../124-libxft2_2.3.6-1_amd64.deb ... 461s Unpacking libxft2:amd64 (2.3.6-1) ... 461s Selecting previously unselected package libxss1:amd64. 461s Preparing to unpack .../125-libxss1_1%3a1.2.3-1build2_amd64.deb ... 461s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 461s Selecting previously unselected package libtk8.6:amd64. 461s Preparing to unpack .../126-libtk8.6_8.6.13-2_amd64.deb ... 461s Unpacking libtk8.6:amd64 (8.6.13-2) ... 461s Selecting previously unselected package libxt6:amd64. 461s Preparing to unpack .../127-libxt6_1%3a1.2.1-1.1_amd64.deb ... 461s Unpacking libxt6:amd64 (1:1.2.1-1.1) ... 461s Selecting previously unselected package libxmu6:amd64. 462s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_amd64.deb ... 462s Unpacking libxmu6:amd64 (2:1.1.3-3) ... 462s Selecting previously unselected package libxpm4:amd64. 462s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_amd64.deb ... 462s Unpacking libxpm4:amd64 (1:3.5.17-1) ... 462s Selecting previously unselected package libxaw7:amd64. 462s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_amd64.deb ... 462s Unpacking libxaw7:amd64 (2:1.0.14-1) ... 462s Selecting previously unselected package libxi6:amd64. 462s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_amd64.deb ... 462s Unpacking libxi6:amd64 (2:1.8.1-1) ... 462s Selecting previously unselected package libzzip-0-13:amd64. 462s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_amd64.deb ... 462s Unpacking libzzip-0-13:amd64 (0.13.72+dfsg.1-1.1) ... 462s Selecting previously unselected package zip. 462s Preparing to unpack .../133-zip_3.0-13_amd64.deb ... 462s Unpacking zip (3.0-13) ... 463s Selecting previously unselected package unzip. 463s Preparing to unpack .../134-unzip_6.0-28ubuntu3_amd64.deb ... 463s Unpacking unzip (6.0-28ubuntu3) ... 463s Selecting previously unselected package xdg-utils. 463s Preparing to unpack .../135-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 463s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 463s Selecting previously unselected package r-base-core. 463s Preparing to unpack .../136-r-base-core_4.3.2-1build1_amd64.deb ... 463s Unpacking r-base-core (4.3.2-1build1) ... 463s Selecting previously unselected package r-cran-littler. 463s Preparing to unpack .../137-r-cran-littler_0.3.19-1_amd64.deb ... 463s Unpacking r-cran-littler (0.3.19-1) ... 463s Selecting previously unselected package littler. 463s Preparing to unpack .../138-littler_0.3.19-1_all.deb ... 463s Unpacking littler (0.3.19-1) ... 463s Selecting previously unselected package node-bootstrap-sass. 463s Preparing to unpack .../139-node-bootstrap-sass_3.4.3-2_all.deb ... 463s Unpacking node-bootstrap-sass (3.4.3-2) ... 463s Selecting previously unselected package node-html5shiv. 463s Preparing to unpack .../140-node-html5shiv_3.7.3+dfsg-5_all.deb ... 463s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 463s Selecting previously unselected package node-normalize.css. 463s Preparing to unpack .../141-node-normalize.css_8.0.1-5_all.deb ... 463s Unpacking node-normalize.css (8.0.1-5) ... 463s Selecting previously unselected package pandoc-data. 463s Preparing to unpack .../142-pandoc-data_3.1.3-1_all.deb ... 463s Unpacking pandoc-data (3.1.3-1) ... 463s Selecting previously unselected package pandoc. 463s Preparing to unpack .../143-pandoc_3.1.3+ds-2_amd64.deb ... 463s Unpacking pandoc (3.1.3+ds-2) ... 463s Selecting previously unselected package pkgconf-bin. 463s Preparing to unpack .../144-pkgconf-bin_1.8.1-2_amd64.deb ... 463s 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Preparing to unpack .../150-r-bioc-biocgenerics_0.48.1-2_all.deb ... 464s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 464s Selecting previously unselected package r-bioc-biobase. 464s Preparing to unpack .../151-r-bioc-biobase_2.62.0-1_amd64.deb ... 464s Unpacking r-bioc-biobase (2.62.0-1) ... 464s Selecting previously unselected package r-bioc-s4vectors. 464s Preparing to unpack .../152-r-bioc-s4vectors_0.40.2+dfsg-1_amd64.deb ... 464s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 464s Selecting previously unselected package r-bioc-iranges. 464s Preparing to unpack .../153-r-bioc-iranges_2.36.0-1_amd64.deb ... 464s Unpacking r-bioc-iranges (2.36.0-1) ... 464s Selecting previously unselected package r-cran-dbi. 464s Preparing to unpack .../154-r-cran-dbi_1.2.2-1_all.deb ... 464s Unpacking r-cran-dbi (1.2.2-1) ... 464s Selecting previously unselected package r-cran-bit. 464s Preparing to unpack .../155-r-cran-bit_4.0.5-1_amd64.deb ... 464s Unpacking r-cran-bit (4.0.5-1) ... 464s Selecting previously unselected package r-cran-bit64. 464s Preparing to unpack .../156-r-cran-bit64_4.0.5-1_amd64.deb ... 464s Unpacking r-cran-bit64 (4.0.5-1) ... 464s Selecting previously unselected package r-cran-rlang. 464s Preparing to unpack .../157-r-cran-rlang_1.1.3-1_amd64.deb ... 464s Unpacking r-cran-rlang (1.1.3-1) ... 464s Selecting previously unselected package r-cran-cli. 464s Preparing to unpack .../158-r-cran-cli_3.6.2-1_amd64.deb ... 464s Unpacking r-cran-cli (3.6.2-1) ... 464s Selecting previously unselected package r-cran-glue. 464s Preparing to unpack .../159-r-cran-glue_1.7.0-1_amd64.deb ... 464s Unpacking r-cran-glue (1.7.0-1) ... 464s Selecting previously unselected package r-cran-lifecycle. 464s Preparing to unpack .../160-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 464s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 464s Selecting previously unselected package r-cran-vctrs. 464s Preparing to unpack .../161-r-cran-vctrs_0.6.5-1_amd64.deb ... 464s Unpacking r-cran-vctrs (0.6.5-1) ... 464s Selecting previously unselected package r-cran-blob. 464s Preparing to unpack .../162-r-cran-blob_1.2.4-1_all.deb ... 464s Unpacking r-cran-blob (1.2.4-1) ... 464s Selecting previously unselected package r-cran-fastmap. 464s Preparing to unpack .../163-r-cran-fastmap_1.1.1-1_amd64.deb ... 464s Unpacking r-cran-fastmap (1.1.1-1) ... 464s Selecting previously unselected package r-cran-cachem. 464s Preparing to unpack .../164-r-cran-cachem_1.0.8-1_amd64.deb ... 464s Unpacking r-cran-cachem (1.0.8-1) ... 464s Selecting previously unselected package r-cran-memoise. 464s Preparing to unpack .../165-r-cran-memoise_2.0.1-1_all.deb ... 464s Unpacking r-cran-memoise (2.0.1-1) ... 464s Selecting previously unselected package r-cran-pkgconfig. 464s Preparing to unpack .../166-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 464s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 464s Selecting previously unselected package r-cran-plogr. 464s Preparing to unpack .../167-r-cran-plogr_0.2.0-3build1_all.deb ... 464s Unpacking r-cran-plogr (0.2.0-3build1) ... 464s Selecting previously unselected package r-cran-cpp11. 464s Preparing to unpack .../168-r-cran-cpp11_0.4.7-1_all.deb ... 464s Unpacking r-cran-cpp11 (0.4.7-1) ... 464s Selecting previously unselected package r-cran-rsqlite. 464s Preparing to unpack .../169-r-cran-rsqlite_2.3.4-1_amd64.deb ... 464s Unpacking r-cran-rsqlite (2.3.4-1) ... 464s Selecting previously unselected package r-cran-curl. 464s Preparing to unpack .../170-r-cran-curl_5.2.0+dfsg-1_amd64.deb ... 464s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 464s Selecting previously unselected package r-cran-jsonlite. 465s Preparing to unpack .../171-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 465s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 465s Selecting previously unselected package r-cran-mime. 465s Preparing to unpack .../172-r-cran-mime_0.12-1_amd64.deb ... 465s Unpacking r-cran-mime (0.12-1) ... 465s Selecting previously unselected package r-cran-sys. 465s Preparing to unpack .../173-r-cran-sys_3.4.2-1_amd64.deb ... 465s Unpacking r-cran-sys (3.4.2-1) ... 465s Selecting previously unselected package r-cran-askpass. 465s Preparing to unpack .../174-r-cran-askpass_1.2.0-1_amd64.deb ... 465s Unpacking r-cran-askpass (1.2.0-1) ... 465s Selecting previously unselected package r-cran-openssl. 465s Preparing to unpack .../175-r-cran-openssl_2.1.1+dfsg-2_amd64.deb ... 465s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 465s Selecting previously unselected package r-cran-r6. 465s Preparing to unpack .../176-r-cran-r6_2.5.1-1_all.deb ... 465s Unpacking r-cran-r6 (2.5.1-1) ... 465s Selecting previously unselected package r-cran-httr. 465s Preparing to unpack .../177-r-cran-httr_1.4.7+dfsg-1_all.deb ... 465s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 465s Selecting previously unselected package r-cran-png. 465s Preparing to unpack .../178-r-cran-png_0.1-8-1_amd64.deb ... 465s Unpacking r-cran-png (0.1-8-1) ... 465s Selecting previously unselected package r-bioc-zlibbioc. 465s Preparing to unpack .../179-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 465s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 465s Selecting previously unselected package r-bioc-xvector. 465s Preparing to unpack .../180-r-bioc-xvector_0.42.0-1_amd64.deb ... 465s Unpacking r-bioc-xvector (0.42.0-1) ... 465s Selecting previously unselected package r-cran-bitops. 465s Preparing to unpack .../181-r-cran-bitops_1.0-7-1_amd64.deb ... 465s Unpacking r-cran-bitops (1.0-7-1) ... 465s Selecting previously unselected package r-cran-rcurl. 465s Preparing to unpack .../182-r-cran-rcurl_1.98-1.14+dfsg-1_amd64.deb ... 465s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 465s Selecting previously unselected package r-bioc-genomeinfodbdata. 465s Preparing to unpack .../183-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 465s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 465s Selecting previously unselected package r-bioc-genomeinfodb. 465s Preparing to unpack .../184-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 465s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 465s Selecting previously unselected package r-cran-crayon. 465s Preparing to unpack .../185-r-cran-crayon_1.5.2-1_all.deb ... 465s Unpacking r-cran-crayon (1.5.2-1) ... 465s Selecting previously unselected package r-bioc-biostrings. 465s Preparing to unpack .../186-r-bioc-biostrings_2.70.2+dfsg-1_amd64.deb ... 465s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 465s Selecting previously unselected package r-bioc-keggrest. 465s Preparing to unpack .../187-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 465s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 465s Selecting previously unselected package r-bioc-annotationdbi. 465s Preparing to unpack .../188-r-bioc-annotationdbi_1.64.1-1_all.deb ... 465s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 465s Selecting previously unselected package r-cran-generics. 465s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 465s Unpacking r-cran-generics (0.1.3-1) ... 466s Selecting previously unselected package r-cran-magrittr. 466s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_amd64.deb ... 466s Unpacking r-cran-magrittr (2.0.3-1) ... 466s Selecting previously unselected package r-cran-fansi. 466s Preparing to unpack .../191-r-cran-fansi_1.0.5-1_amd64.deb ... 466s Unpacking r-cran-fansi (1.0.5-1) ... 466s Selecting previously unselected package r-cran-utf8. 466s Preparing to unpack .../192-r-cran-utf8_1.2.4-1_amd64.deb ... 466s Unpacking r-cran-utf8 (1.2.4-1) ... 466s Selecting previously unselected package r-cran-pillar. 466s Preparing to unpack .../193-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 466s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 466s Selecting previously unselected package r-cran-tibble. 466s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 466s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 466s Selecting previously unselected package r-cran-withr. 466s Preparing to unpack .../195-r-cran-withr_2.5.0-1_all.deb ... 466s Unpacking r-cran-withr (2.5.0-1) ... 466s Selecting previously unselected package r-cran-tidyselect. 466s Preparing to unpack .../196-r-cran-tidyselect_1.2.0+dfsg-1_amd64.deb ... 466s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 466s Selecting previously unselected package r-cran-dplyr. 466s Preparing to unpack .../197-r-cran-dplyr_1.1.4-1_amd64.deb ... 466s Unpacking r-cran-dplyr (1.1.4-1) ... 466s Selecting previously unselected package r-cran-purrr. 466s Preparing to unpack .../198-r-cran-purrr_1.0.2-1_amd64.deb ... 466s Unpacking r-cran-purrr (1.0.2-1) ... 466s Selecting previously unselected package r-cran-stringi. 466s Preparing to unpack .../199-r-cran-stringi_1.8.3-1_amd64.deb ... 466s Unpacking r-cran-stringi (1.8.3-1) ... 466s Selecting previously unselected package r-cran-stringr. 466s Preparing to unpack .../200-r-cran-stringr_1.5.1-1_all.deb ... 466s Unpacking r-cran-stringr (1.5.1-1) ... 466s Selecting previously unselected package r-cran-tidyr. 466s Preparing to unpack .../201-r-cran-tidyr_1.3.1-1_amd64.deb ... 466s Unpacking r-cran-tidyr (1.3.1-1) ... 466s Selecting previously unselected package r-cran-dbplyr. 466s Preparing to unpack .../202-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 466s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 466s Selecting previously unselected package r-cran-filelock. 466s Preparing to unpack .../203-r-cran-filelock_1.0.3-1_amd64.deb ... 466s Unpacking r-cran-filelock (1.0.3-1) ... 466s Selecting previously unselected package r-bioc-biocfilecache. 466s Preparing to unpack .../204-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 466s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 466s Selecting previously unselected package r-cran-formatr. 466s Preparing to unpack .../205-r-cran-formatr_1.14-1_all.deb ... 466s Unpacking r-cran-formatr (1.14-1) ... 466s Selecting previously unselected package r-cran-lambda.r. 466s Preparing to unpack .../206-r-cran-lambda.r_1.2.4-2build1_all.deb ... 466s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 466s Selecting previously unselected package r-cran-futile.options. 466s Preparing to unpack .../207-r-cran-futile.options_1.0.1-3build1_all.deb ... 466s Unpacking r-cran-futile.options (1.0.1-3build1) ... 466s Selecting previously unselected package r-cran-futile.logger. 466s Preparing to unpack .../208-r-cran-futile.logger_1.4.3-4build1_all.deb ... 466s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 466s Selecting previously unselected package r-cran-snow. 466s Preparing to unpack .../209-r-cran-snow_1%3a0.4.4-2_all.deb ... 466s Unpacking r-cran-snow (1:0.4.4-2) ... 466s Selecting previously unselected package r-cran-codetools. 466s Preparing to unpack .../210-r-cran-codetools_0.2-19-1_all.deb ... 466s Unpacking r-cran-codetools (0.2-19-1) ... 466s Selecting previously unselected package r-cran-bh. 466s Preparing to unpack .../211-r-cran-bh_1.84.0-1_all.deb ... 466s Unpacking r-cran-bh (1.84.0-1) ... 467s Selecting previously unselected package r-bioc-biocparallel. 467s Preparing to unpack .../212-r-bioc-biocparallel_1.36.0-1_amd64.deb ... 467s Unpacking r-bioc-biocparallel (1.36.0-1) ... 467s Selecting previously unselected package r-cran-base64enc. 467s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3_amd64.deb ... 467s Unpacking r-cran-base64enc (0.1-3-3) ... 467s Selecting previously unselected package r-cran-digest. 467s Preparing to unpack .../214-r-cran-digest_0.6.34-1_amd64.deb ... 467s Unpacking r-cran-digest (0.6.34-1) ... 467s Selecting previously unselected package r-cran-ellipsis. 467s Preparing to unpack .../215-r-cran-ellipsis_0.3.2-2_amd64.deb ... 467s Unpacking r-cran-ellipsis (0.3.2-2) ... 467s Selecting previously unselected package r-cran-htmltools. 467s Preparing to unpack .../216-r-cran-htmltools_0.5.7-1_amd64.deb ... 467s Unpacking r-cran-htmltools (0.5.7-1) ... 467s Selecting previously unselected package r-cran-evaluate. 467s Preparing to unpack .../217-r-cran-evaluate_0.23-1_all.deb ... 467s Unpacking r-cran-evaluate (0.23-1) ... 467s Selecting previously unselected package r-cran-xfun. 467s Preparing to unpack .../218-r-cran-xfun_0.41+dfsg-1_amd64.deb ... 467s Unpacking r-cran-xfun (0.41+dfsg-1) ... 467s Selecting previously unselected package r-cran-highr. 467s Preparing to unpack .../219-r-cran-highr_0.10+dfsg-1_all.deb ... 467s Unpacking r-cran-highr (0.10+dfsg-1) ... 467s Selecting previously unselected package r-cran-yaml. 467s Preparing to unpack .../220-r-cran-yaml_2.3.8-1_amd64.deb ... 467s Unpacking r-cran-yaml (2.3.8-1) ... 467s Selecting previously unselected package libjs-mathjax. 467s Preparing to unpack .../221-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 467s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 468s Selecting previously unselected package r-cran-knitr. 468s Preparing to unpack .../222-r-cran-knitr_1.45+dfsg-1_all.deb ... 468s Unpacking r-cran-knitr (1.45+dfsg-1) ... 468s Selecting previously unselected package r-cran-jquerylib. 468s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 468s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 468s Selecting previously unselected package r-cran-fs. 468s Preparing to unpack .../224-r-cran-fs_1.6.3+dfsg-1_amd64.deb ... 468s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 468s Selecting previously unselected package r-cran-rappdirs. 468s Preparing to unpack .../225-r-cran-rappdirs_0.3.3-1_amd64.deb ... 468s Unpacking r-cran-rappdirs (0.3.3-1) ... 468s Selecting previously unselected package r-cran-sass. 468s Preparing to unpack .../226-r-cran-sass_0.4.8+dfsg-1_amd64.deb ... 468s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 468s Selecting previously unselected package r-cran-bslib. 468s Preparing to unpack .../227-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 468s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 468s Selecting previously unselected package r-cran-fontawesome. 468s Preparing to unpack .../228-r-cran-fontawesome_0.5.2-1_all.deb ... 468s Unpacking r-cran-fontawesome (0.5.2-1) ... 468s Selecting previously unselected package r-cran-tinytex. 468s Preparing to unpack .../229-r-cran-tinytex_0.49-1_all.deb ... 468s Unpacking r-cran-tinytex (0.49-1) ... 468s Selecting previously unselected package libjs-modernizr. 468s Preparing to unpack .../230-libjs-modernizr_2.6.2+ds1-5_all.deb ... 468s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 468s Selecting previously unselected package r-cran-pkgkitten. 468s Preparing to unpack .../231-r-cran-pkgkitten_0.2.3-1_all.deb ... 468s Unpacking r-cran-pkgkitten (0.2.3-1) ... 468s Selecting previously unselected package r-cran-rcpp. 468s Preparing to unpack .../232-r-cran-rcpp_1.0.12-1_amd64.deb ... 468s Unpacking r-cran-rcpp (1.0.12-1) ... 468s Selecting previously unselected package r-cran-later. 468s Preparing to unpack .../233-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 468s Unpacking r-cran-later (1.3.2+dfsg-1) ... 468s Selecting previously unselected package r-cran-promises. 468s Preparing to unpack .../234-r-cran-promises_1.2.1+dfsg-1_amd64.deb ... 468s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 468s Selecting previously unselected package r-cran-httpuv. 468s Preparing to unpack .../235-r-cran-httpuv_1.6.14+dfsg-1_amd64.deb ... 468s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 469s Selecting previously unselected package r-cran-xtable. 469s Preparing to unpack .../236-r-cran-xtable_1%3a1.8-4-2_all.deb ... 469s Unpacking r-cran-xtable (1:1.8-4-2) ... 469s Selecting previously unselected package r-cran-sourcetools. 469s Preparing to unpack .../237-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 469s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 469s Selecting previously unselected package r-cran-commonmark. 469s Preparing to unpack .../238-r-cran-commonmark_1.9.1-1_amd64.deb ... 469s Unpacking r-cran-commonmark (1.9.1-1) ... 469s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 469s Preparing to unpack .../239-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 469s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 469s Selecting previously unselected package r-cran-shiny. 469s Preparing to unpack .../240-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 469s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 469s Selecting previously unselected package r-cran-rmarkdown. 469s Preparing to unpack .../241-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 469s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 469s Selecting previously unselected package r-cran-bookdown. 469s Preparing to unpack .../242-r-cran-bookdown_0.37+dfsg-1_all.deb ... 469s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 469s Selecting previously unselected package r-cran-biocmanager. 469s Preparing to unpack .../243-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 469s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 469s Selecting previously unselected package tex-common. 469s Preparing to unpack .../244-tex-common_6.18_all.deb ... 469s Unpacking tex-common (6.18) ... 469s Selecting previously unselected package t1utils. 469s Preparing to unpack .../245-t1utils_1.41-4build2_amd64.deb ... 469s Unpacking t1utils (1.41-4build2) ... 469s Selecting previously unselected package texlive-binaries. 469s Preparing to unpack .../246-texlive-binaries_2023.20230311.66589-9_amd64.deb ... 469s Unpacking texlive-binaries (2023.20230311.66589-9) ... 469s Selecting previously unselected package texlive-base. 469s Preparing to unpack .../247-texlive-base_2023.20240207-1_all.deb ... 469s Unpacking texlive-base (2023.20240207-1) ... 471s Selecting previously unselected package texlive-latex-base. 471s Preparing to unpack .../248-texlive-latex-base_2023.20240207-1_all.deb ... 471s Unpacking texlive-latex-base (2023.20240207-1) ... 471s Selecting previously unselected package texlive-bibtex-extra. 471s Preparing to unpack .../249-texlive-bibtex-extra_2023.20240207-1_all.deb ... 471s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 475s Selecting previously unselected package r-bioc-biocstyle. 475s Preparing to unpack .../250-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 475s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 475s Selecting previously unselected package r-cran-xml. 475s Preparing to unpack .../251-r-cran-xml_3.99-0.16.1-1_amd64.deb ... 475s Unpacking r-cran-xml (3.99-0.16.1-1) ... 475s Selecting previously unselected package r-cran-hms. 475s Preparing to unpack .../252-r-cran-hms_1.1.3-1_all.deb ... 475s Unpacking r-cran-hms (1.1.3-1) ... 475s Selecting previously unselected package r-cran-prettyunits. 475s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 475s Unpacking r-cran-prettyunits (1.2.0-1) ... 475s Selecting previously unselected package r-cran-progress. 475s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 475s Unpacking r-cran-progress (1.2.3-1) ... 475s Selecting previously unselected package r-cran-xml2. 475s Preparing to unpack .../255-r-cran-xml2_1.3.6-1_amd64.deb ... 475s Unpacking r-cran-xml2 (1.3.6-1) ... 475s Selecting previously unselected package r-bioc-biomart. 475s Preparing to unpack .../256-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 475s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 475s Selecting previously unselected package r-cran-backports. 475s Preparing to unpack .../257-r-cran-backports_1.4.1-1_amd64.deb ... 475s Unpacking r-cran-backports (1.4.1-1) ... 475s Selecting previously unselected package r-cran-broom. 475s Preparing to unpack .../258-r-cran-broom_1.0.5+dfsg-1_all.deb ... 475s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 475s Selecting previously unselected package r-cran-lattice. 475s Preparing to unpack .../259-r-cran-lattice_0.22-5-1_amd64.deb ... 475s Unpacking r-cran-lattice (0.22-5-1) ... 475s Selecting previously unselected package r-cran-matrix. 475s Preparing to unpack .../260-r-cran-matrix_1.6-5-1_amd64.deb ... 475s Unpacking r-cran-matrix (1.6-5-1) ... 475s Selecting previously unselected package r-bioc-decoupler. 475s Preparing to unpack .../261-r-bioc-decoupler_2.8.0+dfsg-2_all.deb ... 475s Unpacking r-bioc-decoupler (2.8.0+dfsg-2) ... 475s Selecting previously unselected package r-cran-matrixstats. 475s Preparing to unpack .../262-r-cran-matrixstats_1.2.0-1_amd64.deb ... 475s Unpacking r-cran-matrixstats (1.2.0-1) ... 475s Selecting previously unselected package r-bioc-matrixgenerics. 475s Preparing to unpack .../263-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 475s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 475s Selecting previously unselected package r-cran-abind. 475s Preparing to unpack .../264-r-cran-abind_1.4-5-2_all.deb ... 475s Unpacking r-cran-abind (1.4-5-2) ... 475s Selecting previously unselected package r-bioc-s4arrays. 475s Preparing to unpack .../265-r-bioc-s4arrays_1.2.0+dfsg-1_amd64.deb ... 475s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 475s Selecting previously unselected package r-bioc-sparsearray. 476s Preparing to unpack .../266-r-bioc-sparsearray_1.2.4+dfsg-1_amd64.deb ... 476s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 476s Selecting previously unselected package r-bioc-delayedarray. 476s Preparing to unpack .../267-r-bioc-delayedarray_0.28.0+dfsg-1_amd64.deb ... 476s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 476s Selecting previously unselected package r-bioc-genomicranges. 476s Preparing to unpack .../268-r-bioc-genomicranges_1.54.1+dfsg-1_amd64.deb ... 476s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 476s Selecting previously unselected package r-bioc-summarizedexperiment. 476s Preparing to unpack .../269-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 476s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 476s Selecting previously unselected package r-cran-locfit. 476s Preparing to unpack .../270-r-cran-locfit_1.5-9.8-1_amd64.deb ... 476s Unpacking r-cran-locfit (1.5-9.8-1) ... 476s Selecting previously unselected package r-cran-gtable. 476s Preparing to unpack .../271-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 476s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 476s Selecting previously unselected package r-cran-isoband. 476s Preparing to unpack .../272-r-cran-isoband_0.2.7-1_amd64.deb ... 476s Unpacking r-cran-isoband (0.2.7-1) ... 476s Selecting previously unselected package r-cran-mass. 476s Preparing to unpack .../273-r-cran-mass_7.3-60.0.1-1_amd64.deb ... 476s Unpacking r-cran-mass (7.3-60.0.1-1) ... 476s Selecting previously unselected package r-cran-nlme. 476s Preparing to unpack .../274-r-cran-nlme_3.1.164-1_amd64.deb ... 476s Unpacking r-cran-nlme (3.1.164-1) ... 476s Selecting previously unselected package r-cran-mgcv. 476s Preparing to unpack .../275-r-cran-mgcv_1.9-1-1_amd64.deb ... 476s Unpacking r-cran-mgcv (1.9-1-1) ... 476s Selecting previously unselected package r-cran-farver. 476s Preparing to unpack .../276-r-cran-farver_2.1.1-1_amd64.deb ... 476s Unpacking r-cran-farver (2.1.1-1) ... 476s Selecting previously unselected package r-cran-labeling. 476s Preparing to unpack .../277-r-cran-labeling_0.4.3-1_all.deb ... 476s Unpacking r-cran-labeling (0.4.3-1) ... 476s Selecting previously unselected package r-cran-colorspace. 476s Preparing to unpack .../278-r-cran-colorspace_2.1-0+dfsg-1_amd64.deb ... 476s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 476s Selecting previously unselected package r-cran-munsell. 476s Preparing to unpack .../279-r-cran-munsell_0.5.0-2build1_all.deb ... 476s Unpacking r-cran-munsell (0.5.0-2build1) ... 476s Selecting previously unselected package r-cran-rcolorbrewer. 476s Preparing to unpack .../280-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 476s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 476s Selecting previously unselected package r-cran-viridislite. 476s Preparing to unpack .../281-r-cran-viridislite_0.4.2-2_all.deb ... 476s Unpacking r-cran-viridislite (0.4.2-2) ... 476s Selecting previously unselected package r-cran-scales. 476s Preparing to unpack .../282-r-cran-scales_1.3.0-1_all.deb ... 476s Unpacking r-cran-scales (1.3.0-1) ... 476s Selecting previously unselected package r-cran-ggplot2. 476s Preparing to unpack .../283-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 476s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 477s Selecting previously unselected package r-cran-rcpparmadillo. 477s Preparing to unpack .../284-r-cran-rcpparmadillo_0.12.8.0.0-1_amd64.deb ... 477s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 477s Selecting previously unselected package r-bioc-deseq2. 477s Preparing to unpack .../285-r-bioc-deseq2_1.42.0+dfsg-1_amd64.deb ... 477s Unpacking r-bioc-deseq2 (1.42.0+dfsg-1) ... 477s Selecting previously unselected package r-cran-ggrepel. 477s Preparing to unpack .../286-r-cran-ggrepel_0.9.5-1_amd64.deb ... 477s Unpacking r-cran-ggrepel (0.9.5-1) ... 477s Selecting previously unselected package r-cran-gridextra. 477s Preparing to unpack .../287-r-cran-gridextra_2.3-3build1_all.deb ... 477s Unpacking r-cran-gridextra (2.3-3build1) ... 477s Selecting previously unselected package r-cran-plyr. 477s Preparing to unpack .../288-r-cran-plyr_1.8.9-1_amd64.deb ... 477s Unpacking r-cran-plyr (1.8.9-1) ... 477s Selecting previously unselected package r-cran-reshape2. 477s Preparing to unpack .../289-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 477s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 477s Selecting previously unselected package r-bioc-progeny. 477s Preparing to unpack .../290-r-bioc-progeny_1.24.0+ds-1_all.deb ... 477s Unpacking r-bioc-progeny (1.24.0+ds-1) ... 477s Selecting previously unselected package r-bioc-singlecellexperiment. 477s Preparing to unpack .../291-r-bioc-singlecellexperiment_1.24.0+ds-1_all.deb ... 477s Unpacking r-bioc-singlecellexperiment (1.24.0+ds-1) ... 477s Selecting previously unselected package r-cran-brio. 477s Preparing to unpack .../292-r-cran-brio_1.1.4-1_amd64.deb ... 477s Unpacking r-cran-brio (1.1.4-1) ... 477s Selecting previously unselected package r-cran-ps. 477s Preparing to unpack .../293-r-cran-ps_1.7.6-1_amd64.deb ... 477s Unpacking r-cran-ps (1.7.6-1) ... 477s Selecting previously unselected package r-cran-processx. 477s Preparing to unpack .../294-r-cran-processx_3.8.3-1_amd64.deb ... 477s Unpacking r-cran-processx (3.8.3-1) ... 477s Selecting previously unselected package r-cran-callr. 477s Preparing to unpack .../295-r-cran-callr_3.7.3-2_all.deb ... 477s Unpacking r-cran-callr (3.7.3-2) ... 477s Selecting previously unselected package r-cran-catools. 477s Preparing to unpack .../296-r-cran-catools_1.18.2-1_amd64.deb ... 477s Unpacking r-cran-catools (1.18.2-1) ... 477s Selecting previously unselected package r-cran-rematch. 477s Preparing to unpack .../297-r-cran-rematch_2.0.0-1_all.deb ... 477s Unpacking r-cran-rematch (2.0.0-1) ... 477s Selecting previously unselected package r-cran-cellranger. 477s Preparing to unpack .../298-r-cran-cellranger_1.1.0-3_all.deb ... 477s Unpacking r-cran-cellranger (1.1.0-3) ... 477s Selecting previously unselected package r-cran-clipr. 477s Preparing to unpack .../299-r-cran-clipr_0.8.0-1_all.deb ... 477s Unpacking r-cran-clipr (0.8.0-1) ... 477s Selecting previously unselected package r-cran-cluster. 477s Preparing to unpack .../300-r-cran-cluster_2.1.6-1_amd64.deb ... 477s Unpacking r-cran-cluster (2.1.6-1) ... 478s Selecting previously unselected package r-cran-htmlwidgets. 478s Preparing to unpack .../301-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 478s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 478s Selecting previously unselected package r-cran-miniui. 478s Preparing to unpack .../302-r-cran-miniui_0.1.1.1-3build1_all.deb ... 478s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 478s Selecting previously unselected package r-cran-shinyjs. 478s Preparing to unpack .../303-r-cran-shinyjs_2.1.0-1_all.deb ... 478s Unpacking r-cran-shinyjs (2.1.0-1) ... 478s Selecting previously unselected package r-cran-colourpicker. 478s Preparing to unpack .../304-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 478s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 478s Selecting previously unselected package r-cran-cowplot. 478s Preparing to unpack .../305-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 478s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 478s Selecting previously unselected package r-cran-lazyeval. 478s Preparing to unpack .../306-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 478s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 478s Selecting previously unselected package r-cran-crosstalk. 478s Preparing to unpack .../307-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 478s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 478s Selecting previously unselected package r-cran-data.table. 478s Preparing to unpack .../308-r-cran-data.table_1.14.10+dfsg-1_amd64.deb ... 478s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 478s Selecting previously unselected package r-cran-deldir. 478s Preparing to unpack .../309-r-cran-deldir_2.0-4-1_amd64.deb ... 478s Unpacking r-cran-deldir (2.0-4-1) ... 478s Selecting previously unselected package r-cran-desc. 478s Preparing to unpack .../310-r-cran-desc_1.4.3-1_all.deb ... 478s Unpacking r-cran-desc (1.4.3-1) ... 478s Selecting previously unselected package r-cran-diffobj. 478s Preparing to unpack .../311-r-cran-diffobj_0.3.5-1_amd64.deb ... 478s Unpacking r-cran-diffobj (0.3.5-1) ... 478s Selecting previously unselected package r-cran-dotcall64. 478s Preparing to unpack .../312-r-cran-dotcall64_1.1-1-1_amd64.deb ... 478s Unpacking r-cran-dotcall64 (1.1-1-1) ... 478s Selecting previously unselected package r-cran-sitmo. 478s Preparing to unpack .../313-r-cran-sitmo_2.0.2-1_amd64.deb ... 478s Unpacking r-cran-sitmo (2.0.2-1) ... 478s Selecting previously unselected package r-cran-dqrng. 478s Preparing to unpack .../314-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 478s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 478s Selecting previously unselected package r-cran-fastdummies. 478s Preparing to unpack .../315-r-cran-fastdummies_1.7.3-2_all.deb ... 478s Unpacking r-cran-fastdummies (1.7.3-2) ... 478s Selecting previously unselected package r-cran-survival. 478s Preparing to unpack .../316-r-cran-survival_3.5-8-1_amd64.deb ... 478s Unpacking r-cran-survival (3.5-8-1) ... 478s Selecting previously unselected package r-cran-fitdistrplus. 478s Preparing to unpack .../317-r-cran-fitdistrplus_1.1-11-1_all.deb ... 478s Unpacking r-cran-fitdistrplus (1.1-11-1) ... 479s Selecting previously unselected package r-cran-fnn. 479s Preparing to unpack .../318-r-cran-fnn_1.1.4-1_amd64.deb ... 479s Unpacking r-cran-fnn (1.1.4-1) ... 479s Selecting previously unselected package r-cran-globals. 479s Preparing to unpack .../319-r-cran-globals_0.16.2-1_all.deb ... 479s Unpacking r-cran-globals (0.16.2-1) ... 479s Selecting previously unselected package r-cran-listenv. 479s Preparing to unpack .../320-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 479s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 479s Selecting previously unselected package r-cran-parallelly. 479s Preparing to unpack .../321-r-cran-parallelly_1.37.1-1_amd64.deb ... 479s Unpacking r-cran-parallelly (1.37.1-1) ... 479s Selecting previously unselected package r-cran-future. 479s Preparing to unpack .../322-r-cran-future_1.33.1+dfsg-1_all.deb ... 479s Unpacking r-cran-future (1.33.1+dfsg-1) ... 479s Selecting previously unselected package r-cran-future.apply. 479s Preparing to unpack .../323-r-cran-future.apply_1.11.1+dfsg-1_all.deb ... 479s Unpacking r-cran-future.apply (1.11.1+dfsg-1) ... 479s Selecting previously unselected package r-cran-gtools. 479s Preparing to unpack .../324-r-cran-gtools_3.9.5-1_amd64.deb ... 479s Unpacking r-cran-gtools (3.9.5-1) ... 479s Selecting previously unselected package r-cran-gdata. 479s Preparing to unpack .../325-r-cran-gdata_3.0.0-1_all.deb ... 479s Unpacking r-cran-gdata (3.0.0-1) ... 479s Selecting previously unselected package r-cran-ggridges. 479s Preparing to unpack .../326-r-cran-ggridges_0.5.6-1_all.deb ... 479s Unpacking r-cran-ggridges (0.5.6-1) ... 479s Selecting previously unselected package r-cran-goftest. 479s Preparing to unpack .../327-r-cran-goftest_1.2-3-1_amd64.deb ... 479s Unpacking r-cran-goftest (1.2-3-1) ... 479s Selecting previously unselected package r-cran-kernsmooth. 479s Preparing to unpack .../328-r-cran-kernsmooth_2.23-22-1_amd64.deb ... 479s Unpacking r-cran-kernsmooth (2.23-22-1) ... 479s Selecting previously unselected package r-cran-gplots. 479s Preparing to unpack .../329-r-cran-gplots_3.1.3.1-1_all.deb ... 479s Unpacking r-cran-gplots (3.1.3.1-1) ... 479s Selecting previously unselected package r-cran-rprojroot. 479s Preparing to unpack .../330-r-cran-rprojroot_2.0.4-1_all.deb ... 479s Unpacking r-cran-rprojroot (2.0.4-1) ... 479s Selecting previously unselected package r-cran-here. 479s Preparing to unpack .../331-r-cran-here_1.0.1-2_all.deb ... 479s Unpacking r-cran-here (1.0.1-2) ... 479s Selecting previously unselected package r-cran-ica. 479s Preparing to unpack .../332-r-cran-ica_1.0-3-1_all.deb ... 479s Unpacking r-cran-ica (1.0-3-1) ... 479s Selecting previously unselected package r-cran-igraph. 479s Preparing to unpack .../333-r-cran-igraph_1.6.0-1_amd64.deb ... 479s Unpacking r-cran-igraph (1.6.0-1) ... 479s Selecting previously unselected package r-cran-irlba. 479s Preparing to unpack .../334-r-cran-irlba_2.3.5.1-2_amd64.deb ... 479s Unpacking r-cran-irlba (2.3.5.1-2) ... 479s Selecting previously unselected package r-cran-rcpptoml. 479s Preparing to unpack .../335-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 479s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 479s Selecting previously unselected package r-cran-reticulate. 479s Preparing to unpack .../336-r-cran-reticulate_1.35.0+dfsg-1_amd64.deb ... 479s Unpacking r-cran-reticulate (1.35.0+dfsg-1) ... 480s Selecting previously unselected package r-cran-leiden. 480s Preparing to unpack .../337-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 480s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 480s Selecting previously unselected package r-cran-zoo. 480s Preparing to unpack .../338-r-cran-zoo_1.8-12-2_amd64.deb ... 480s Unpacking r-cran-zoo (1.8-12-2) ... 480s Selecting previously unselected package r-cran-lmtest. 480s Preparing to unpack .../339-r-cran-lmtest_0.9.40-1_amd64.deb ... 480s Unpacking r-cran-lmtest (0.9.40-1) ... 480s Selecting previously unselected package r-cran-patchwork. 480s Preparing to unpack .../340-r-cran-patchwork_1.2.0-1_all.deb ... 480s Unpacking r-cran-patchwork (1.2.0-1) ... 480s Selecting previously unselected package r-cran-pbapply. 480s Preparing to unpack .../341-r-cran-pbapply_1.7-2-1_all.deb ... 480s Unpacking r-cran-pbapply (1.7-2-1) ... 480s Selecting previously unselected package r-cran-pheatmap. 480s Preparing to unpack .../342-r-cran-pheatmap_1.0.12-2build1_all.deb ... 480s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 480s Selecting previously unselected package r-cran-pkgbuild. 480s Preparing to unpack .../343-r-cran-pkgbuild_1.4.3-1_all.deb ... 480s Unpacking r-cran-pkgbuild (1.4.3-1) ... 480s Selecting previously unselected package r-cran-pkgload. 480s Preparing to unpack .../344-r-cran-pkgload_1.3.4-1_all.deb ... 480s Unpacking r-cran-pkgload (1.3.4-1) ... 480s Selecting previously unselected package r-cran-plotly. 480s Preparing to unpack .../345-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 480s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 480s Selecting previously unselected package r-cran-polyclip. 480s Preparing to unpack .../346-r-cran-polyclip_1.10-6-1_amd64.deb ... 480s Unpacking r-cran-polyclip (1.10-6-1) ... 480s Selecting previously unselected package r-cran-praise. 480s Preparing to unpack .../347-r-cran-praise_1.0.0-4build1_all.deb ... 480s Unpacking r-cran-praise (1.0.0-4build1) ... 480s Selecting previously unselected package r-cran-progressr. 480s Preparing to unpack .../348-r-cran-progressr_0.14.0-1_all.deb ... 480s Unpacking r-cran-progressr (0.14.0-1) ... 480s Selecting previously unselected package r-cran-rann. 480s Preparing to unpack .../349-r-cran-rann_2.6.1-1build2_amd64.deb ... 480s Unpacking r-cran-rann (2.6.1-1build2) ... 480s Selecting previously unselected package r-cran-rcppannoy. 480s Preparing to unpack .../350-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 480s Unpacking r-cran-rcppannoy (0.0.22-1) ... 480s Selecting previously unselected package r-cran-rcppeigen. 480s Preparing to unpack .../351-r-cran-rcppeigen_0.3.3.9.4-1_amd64.deb ... 480s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 481s Selecting previously unselected package r-cran-rcpphnsw. 481s Preparing to unpack .../352-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 481s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 481s Selecting previously unselected package r-cran-rcppprogress. 481s Preparing to unpack .../353-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 481s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 481s Selecting previously unselected package r-cran-tzdb. 481s Preparing to unpack .../354-r-cran-tzdb_0.4.0-2_amd64.deb ... 481s Unpacking r-cran-tzdb (0.4.0-2) ... 481s Selecting previously unselected package r-cran-vroom. 481s Preparing to unpack .../355-r-cran-vroom_1.6.5-1_amd64.deb ... 481s Unpacking r-cran-vroom (1.6.5-1) ... 481s Selecting previously unselected package r-cran-readr. 481s Preparing to unpack .../356-r-cran-readr_2.1.5-1_amd64.deb ... 481s Unpacking r-cran-readr (2.1.5-1) ... 481s Selecting previously unselected package r-cran-readxl. 481s Preparing to unpack .../357-r-cran-readxl_1.4.3-1_amd64.deb ... 481s Unpacking r-cran-readxl (1.4.3-1) ... 481s Selecting previously unselected package r-cran-rematch2. 481s Preparing to unpack .../358-r-cran-rematch2_2.1.2-2build1_all.deb ... 481s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 481s Selecting previously unselected package r-cran-rocr. 481s Preparing to unpack .../359-r-cran-rocr_1.0-11-2build1_all.deb ... 481s Unpacking r-cran-rocr (1.0-11-2build1) ... 481s Selecting previously unselected package r-cran-rspectra. 481s Preparing to unpack .../360-r-cran-rspectra_0.16-1-1_amd64.deb ... 481s Unpacking r-cran-rspectra (0.16-1-1) ... 481s Selecting previously unselected package r-cran-rtsne. 481s Preparing to unpack .../361-r-cran-rtsne_0.17-1_amd64.deb ... 481s Unpacking r-cran-rtsne (0.17-1) ... 481s Selecting previously unselected package r-cran-scattermore. 481s Preparing to unpack .../362-r-cran-scattermore_1.2-1_amd64.deb ... 481s Unpacking r-cran-scattermore (1.2-1) ... 481s Selecting previously unselected package r-cran-sctransform. 481s Preparing to unpack .../363-r-cran-sctransform_0.4.1-1_amd64.deb ... 481s Unpacking r-cran-sctransform (0.4.1-1) ... 481s Selecting previously unselected package r-cran-sp. 481s Preparing to unpack .../364-r-cran-sp_1%3a2.1-2+dfsg-1_amd64.deb ... 481s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 481s Selecting previously unselected package r-cran-spam. 481s Preparing to unpack .../365-r-cran-spam_2.10-0-1_amd64.deb ... 481s Unpacking r-cran-spam (2.10-0-1) ... 481s Selecting previously unselected package r-cran-seuratobject. 481s Preparing to unpack .../366-r-cran-seuratobject_5.0.1-1_amd64.deb ... 481s Unpacking r-cran-seuratobject (5.0.1-1) ... 481s Selecting previously unselected package r-cran-spatstat.utils. 481s Preparing to unpack .../367-r-cran-spatstat.utils_3.0-4-1_amd64.deb ... 481s Unpacking r-cran-spatstat.utils (3.0-4-1) ... 481s Selecting previously unselected package r-cran-spatstat.data. 481s Preparing to unpack .../368-r-cran-spatstat.data_3.0-4-1_all.deb ... 481s Unpacking r-cran-spatstat.data (3.0-4-1) ... 482s Selecting previously unselected package r-cran-spatstat.geom. 482s Preparing to unpack .../369-r-cran-spatstat.geom_3.2-8-1_amd64.deb ... 482s Unpacking r-cran-spatstat.geom (3.2-8-1) ... 482s Selecting previously unselected package r-cran-spatstat.random. 482s Preparing to unpack .../370-r-cran-spatstat.random_3.2-2-1_amd64.deb 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r-bioc-singlecellexperiment (1.24.0+ds-1) ... 488s Setting up r-bioc-decoupler (2.8.0+dfsg-2) ... 488s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 488s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 488s Setting up r-bioc-progeny (1.24.0+ds-1) ... 488s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 488s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 488s Setting up r-cran-seurat (5.0.1-1) ... 488s Processing triggers for man-db (2.12.0-3) ... 489s Processing triggers for install-info (7.1-3) ... 489s Processing triggers for libc-bin (2.39-0ubuntu2) ... 489s Processing triggers for tex-common (6.18) ... 490s Running updmap-sys. This may take some time... done. 490s Running mktexlsr /var/lib/texmf ... done. 490s Building format(s) --all. 521s This may take some time... done. 526s Reading package lists... 526s Building dependency tree... 526s Reading state information... 526s Starting pkgProblemResolver with broken count: 0 526s Starting 2 pkgProblemResolver with broken count: 0 526s Done 527s The following NEW packages will be installed: 527s autopkgtest-satdep 527s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 527s Need to get 0 B/696 B of archives. 527s After this operation, 0 B of additional disk space will be used. 527s Get:1 /tmp/autopkgtest.QD4RkX/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 527s Selecting previously unselected package autopkgtest-satdep. 527s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 130314 files and directories currently installed.) 527s Preparing to unpack .../2-autopkgtest-satdep.deb ... 527s Unpacking autopkgtest-satdep (0) ... 527s Setting up autopkgtest-satdep (0) ... 529s (Reading database ... 130314 files and directories currently installed.) 529s Removing autopkgtest-satdep (0) ... 529s autopkgtest [03:48:03]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 529s autopkgtest [03:48:03]: test pkg-r-autopkgtest: [----------------------- 529s Test: Try to load the R library progeny 529s 529s R version 4.3.2 (2023-10-31) -- "Eye Holes" 529s Copyright (C) 2023 The R Foundation for Statistical Computing 529s Platform: x86_64-pc-linux-gnu (64-bit) 529s 529s R is free software and comes with ABSOLUTELY NO WARRANTY. 529s You are welcome to redistribute it under certain conditions. 529s Type 'license()' or 'licence()' for distribution details. 529s 529s R is a collaborative project with many contributors. 529s Type 'contributors()' for more information and 529s 'citation()' on how to cite R or R packages in publications. 529s 529s Type 'demo()' for some demos, 'help()' for on-line help, or 529s 'help.start()' for an HTML browser interface to help. 529s Type 'q()' to quit R. 529s 530s > library('progeny') 530s > 530s > 530s Other tests are currently unsupported! 530s They will be progressively added. 531s autopkgtest [03:48:05]: test pkg-r-autopkgtest: -----------------------] 531s pkg-r-autopkgtest PASS 531s autopkgtest [03:48:05]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 531s autopkgtest [03:48:05]: @@@@@@@@@@@@@@@@@@@@ summary 531s pkg-r-autopkgtest PASS 541s Creating nova instance adt-noble-i386-r-bioc-progeny-20240322-033914-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240321.img (UUID 6f9effbc-61d8-4d0a-a7e9-883547f42ac1)...