0s autopkgtest [03:24:11]: starting date and time: 2024-03-22 03:24:11+0000 0s autopkgtest [03:24:11]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [03:24:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.mgldqmw_/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base --apt-upgrade r-bioc-netsam --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-29.secgroup --name adt-noble-i386-r-bioc-netsam-20240322-032411-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 288s autopkgtest [03:28:59]: testbed dpkg architecture: amd64 288s autopkgtest [03:28:59]: testbed apt version: 2.7.12 289s autopkgtest [03:29:00]: test architecture: i386 289s autopkgtest [03:29:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 289s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 289s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 289s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3805 kB] 289s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 289s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 289s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [467 kB] 289s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [703 kB] 289s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 289s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 289s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 289s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 289s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1277 kB] 289s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 289s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 289s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 289s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 289s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 293s Fetched 11.3 MB in 2s (7408 kB/s) 293s Reading package lists... 294s Reading package lists... 295s Building dependency tree... 295s Reading state information... 295s Calculating upgrade... 295s The following packages will be upgraded: 295s cloud-init fonts-ubuntu-console python3-markupsafe 295s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 295s Need to get 629 kB of archives. 295s After this operation, 11.3 kB disk space will be freed. 295s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 295s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 python3-markupsafe amd64 2.1.5-1build1 [12.6 kB] 295s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 cloud-init all 24.1.2-0ubuntu1 [597 kB] 296s Preconfiguring packages ... 296s Fetched 629 kB in 0s (22.5 MB/s) 296s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 296s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 296s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 296s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_amd64.deb ... 296s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 296s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 296s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 297s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 297s Setting up cloud-init (24.1.2-0ubuntu1) ... 298s Setting up python3-markupsafe (2.1.5-1build1) ... 298s Processing triggers for man-db (2.12.0-3) ... 299s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 299s Reading package lists... 299s Building dependency tree... 299s Reading state information... 300s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 300s sh: Attempting to set up Debian/Ubuntu apt sources automatically 300s sh: Distribution appears to be Ubuntu 301s Reading package lists... 301s Building dependency tree... 301s Reading state information... 302s eatmydata is already the newest version (131-1). 302s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 302s Reading package lists... 303s Building dependency tree... 303s Reading state information... 303s dbus is already the newest version (1.14.10-4ubuntu1). 303s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 303s Reading package lists... 303s Building dependency tree... 303s Reading state information... 303s rng-tools-debian is already the newest version (2.4). 303s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 303s Reading package lists... 303s Building dependency tree... 303s Reading state information... 304s The following packages will be REMOVED: 304s cloud-init* python3-configobj* python3-debconf* 304s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 304s After this operation, 3256 kB disk space will be freed. 304s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 304s Removing cloud-init (24.1.2-0ubuntu1) ... 305s Removing python3-configobj (5.0.8-3) ... 305s Removing python3-debconf (1.5.86) ... 305s Processing triggers for man-db (2.12.0-3) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 305s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 306s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 306s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 306s invoke-rc.d: policy-rc.d denied execution of try-restart. 306s Reading package lists... 306s Building dependency tree... 306s Reading state information... 306s linux-generic is already the newest version (6.8.0-11.11+1). 306s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 307s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 307s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 307s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 309s Reading package lists... 309s Reading package lists... 309s Building dependency tree... 309s Reading state information... 309s Calculating upgrade... 309s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 309s Reading package lists... 310s Building dependency tree... 310s Reading state information... 310s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 310s autopkgtest [03:29:21]: rebooting testbed after setup commands that affected boot 342s autopkgtest [03:29:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 343s autopkgtest [03:29:54]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-netsam 344s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-netsam 1.42.0-1 (dsc) [2229 B] 344s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-netsam 1.42.0-1 (tar) [1085 kB] 344s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-netsam 1.42.0-1 (diff) [2576 B] 344s gpgv: Signature made Mon Dec 4 18:45:40 2023 UTC 344s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 344s gpgv: issuer "tille@debian.org" 344s gpgv: Can't check signature: No public key 344s dpkg-source: warning: cannot verify inline signature for ./r-bioc-netsam_1.42.0-1.dsc: no acceptable signature found 344s autopkgtest [03:29:55]: testing package r-bioc-netsam version 1.42.0-1 346s autopkgtest [03:29:57]: build not needed 350s autopkgtest [03:30:01]: test pkg-r-autopkgtest: preparing testbed 356s Note, using file '/tmp/autopkgtest.3KXp0P/1-autopkgtest-satdep.dsc' to get the build dependencies 356s Reading package lists... 357s Building dependency tree... 357s Reading state information... 357s Starting pkgProblemResolver with broken count: 0 357s Starting 2 pkgProblemResolver with broken count: 0 357s Done 357s The following NEW packages will be installed: 357s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 357s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 357s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-13 357s g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 357s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13 357s gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 357s javascript-common libasan8 libatomic1 libblas-dev libblas3 libbz2-dev 357s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 357s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 357s libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 357s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 357s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 357s libjs-highlight.js libjs-jquery libjs-jquery-datatables 357s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 357s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 357s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 357s liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 357s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 357s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 357s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 357s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 357s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 357s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev littler 357s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 357s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 357s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 357s r-bioc-biomart r-bioc-biostrings r-bioc-genomeinfodb r-bioc-genomeinfodbdata 357s r-bioc-go.db r-bioc-impute r-bioc-iranges r-bioc-keggrest r-bioc-netsam 357s r-bioc-org.hs.eg.db r-bioc-preprocesscore r-bioc-s4vectors r-bioc-xvector 357s r-bioc-zlibbioc r-cran-acepack r-cran-askpass r-cran-backports 357s r-cran-base64enc r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 357s r-cran-bslib r-cran-ca r-cran-cachem r-cran-checkmate r-cran-chron 357s r-cran-cli r-cran-cluster r-cran-codetools r-cran-colorspace 357s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table 357s r-cran-dbi r-cran-dbplyr r-cran-deldir r-cran-digest r-cran-doparallel 357s r-cran-dplyr r-cran-dynamictreecut r-cran-ellipsis r-cran-evaluate 357s r-cran-fansi r-cran-farver r-cran-fastcluster r-cran-fastmap r-cran-filelock 357s r-cran-fontawesome r-cran-foreach r-cran-foreign r-cran-formula r-cran-fs 357s r-cran-gclus r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gridextra 357s r-cran-gtable r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable 357s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-igraph 357s r-cran-interp r-cran-isoband r-cran-iterators r-cran-jpeg r-cran-jquerylib 357s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 357s r-cran-latticeextra r-cran-lifecycle r-cran-littler r-cran-magrittr 357s r-cran-markdown r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 357s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 357s r-cran-openssl r-cran-permute r-cran-pillar r-cran-pkgconfig 357s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits r-cran-progress 357s r-cran-promises r-cran-purrr r-cran-qap r-cran-r2html r-cran-r6 357s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen 357s r-cran-rcurl r-cran-registry r-cran-rlang r-cran-rmarkdown r-cran-rpart 357s r-cran-rsqlite r-cran-rstudioapi r-cran-runit r-cran-sass r-cran-scales 357s r-cran-seriation r-cran-shiny r-cran-sourcetools r-cran-stringi 357s r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr 357s r-cran-tidyselect r-cran-tinytex r-cran-tsp r-cran-utf8 r-cran-vctrs 357s r-cran-vegan r-cran-viridis r-cran-viridislite r-cran-wgcna r-cran-withr 357s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 357s unzip x11-common xdg-utils zip zlib1g-dev 357s 0 upgraded, 284 newly installed, 0 to remove and 0 not upgraded. 357s Need to get 406 MB of archives. 357s After this operation, 1430 MB of additional disk space will be used. 357s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 357s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 357s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 357s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 357s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 357s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 357s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 357s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 357s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 357s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 357s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 357s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 357s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 357s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 357s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 357s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 357s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 357s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 357s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 358s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 358s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 358s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 358s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 358s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 358s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 358s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 358s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 358s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 358s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 358s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 358s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 358s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 358s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 358s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 358s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 358s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 358s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 358s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 358s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 358s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 358s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 358s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 358s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 358s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 358s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 358s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 358s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 358s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 358s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 358s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 358s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 javascript-common all 11+nmu1 [5936 B] 358s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 358s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 358s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 358s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 358s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 358s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 358s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 358s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 358s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 358s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 358s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 358s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 358s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 358s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 358s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 358s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 358s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 358s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 358s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 358s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 358s Get:72 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 358s Get:73 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 358s Get:74 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 358s Get:75 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 358s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 358s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 358s Get:78 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 358s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 358s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 358s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 358s Get:82 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 358s Get:83 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 358s Get:84 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 358s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 358s Get:86 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 358s Get:87 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 358s Get:88 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 358s Get:89 http://ftpmaster.internal/ubuntu noble/main amd64 liblua5.4-0 amd64 5.4.6-3 [166 kB] 358s Get:90 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 358s Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 358s Get:92 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 358s Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 358s Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 358s Get:95 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 358s Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 358s Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 358s Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 358s Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 358s Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 358s Get:101 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 358s Get:102 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 358s Get:103 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 358s Get:104 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 358s Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 358s Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 358s Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 358s Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 358s Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 358s Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 358s Get:111 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 358s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 358s Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 358s Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] 358s Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 358s Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 358s Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 358s Get:118 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 358s Get:119 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 358s Get:120 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 358s Get:121 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 358s Get:122 http://ftpmaster.internal/ubuntu noble/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 358s Get:123 http://ftpmaster.internal/ubuntu noble/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 358s Get:124 http://ftpmaster.internal/ubuntu noble/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 358s Get:125 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc-data all 3.1.3-1 [92.4 kB] 358s Get:126 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc amd64 3.1.3+ds-2 [26.9 MB] 359s Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 359s Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 359s Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 359s Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 359s Get:131 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 359s Get:132 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 359s Get:133 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 359s Get:134 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biobase amd64 2.62.0-1 [2136 kB] 359s Get:135 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4vectors amd64 0.40.2+dfsg-1 [2056 kB] 359s Get:136 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-iranges amd64 2.36.0-1 [2252 kB] 359s Get:137 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dbi all 1.2.2-1 [823 kB] 359s Get:138 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 359s Get:139 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 359s Get:140 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 359s Get:141 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 359s Get:142 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 359s Get:143 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 359s Get:144 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 359s Get:145 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-blob all 1.2.4-1 [49.8 kB] 359s Get:146 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 359s Get:147 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 359s Get:148 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 359s Get:149 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 359s Get:150 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 359s Get:151 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 359s Get:152 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rsqlite amd64 2.3.4-1 [1364 kB] 359s Get:153 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-curl amd64 5.2.0+dfsg-1 [188 kB] 359s Get:154 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 359s Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mime amd64 0.12-1 [35.8 kB] 359s Get:156 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 359s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 359s Get:158 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-openssl amd64 2.1.1+dfsg-2 [402 kB] 359s Get:159 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 359s Get:160 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 359s Get:161 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-png amd64 0.1-8-1 [40.5 kB] 359s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 359s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-xvector amd64 0.42.0-1 [621 kB] 359s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 359s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1 [793 kB] 359s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 359s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 359s Get:168 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 359s Get:169 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biostrings amd64 2.70.2+dfsg-1 [13.6 MB] 359s Get:170 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 359s Get:171 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 359s Get:172 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 359s Get:173 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 359s Get:174 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 359s Get:175 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 359s Get:176 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 359s Get:177 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 359s Get:178 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 359s Get:179 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyselect amd64 1.2.0+dfsg-1 [218 kB] 359s Get:180 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 359s Get:181 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 359s Get:182 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 359s Get:183 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 359s Get:184 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 359s Get:185 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 359s Get:186 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB] 359s Get:187 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 359s Get:188 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml amd64 3.99-0.16.1-1 [1733 kB] 359s Get:189 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 359s Get:190 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 359s Get:191 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 359s Get:192 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-digest amd64 0.6.34-1 [186 kB] 359s Get:193 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 359s Get:194 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml2 amd64 1.3.6-1 [322 kB] 359s Get:195 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 359s Get:196 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-go.db all 3.18.0-1 [18.7 MB] 359s Get:197 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-impute amd64 1.76.0-1 [663 kB] 359s Get:198 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ca all 0.71.1-2build1 [243 kB] 359s Get:199 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cluster amd64 2.1.6-1 [554 kB] 359s Get:200 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 359s Get:201 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-codetools all 0.2-19-1 [90.5 kB] 359s Get:202 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 359s Get:203 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 359s Get:204 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gclus all 1.3.2-2build1 [406 kB] 359s Get:205 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mass amd64 7.3-60.0.1-1 [1119 kB] 359s Get:206 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-qap amd64 0.1-2-1 [365 kB] 359s Get:207 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-registry all 0.5-1-2build1 [202 kB] 359s Get:208 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tsp amd64 1.2-4-1 [627 kB] 359s Get:209 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 359s Get:210 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lattice amd64 0.22-5-1 [1342 kB] 359s Get:211 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nlme amd64 3.1.164-1 [2260 kB] 359s Get:212 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrix amd64 1.6-5-1 [3830 kB] 359s Get:213 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 359s Get:214 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vegan amd64 2.6-4+dfsg-1 [3089 kB] 360s Get:215 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-seriation amd64 1.5.4-1 [1306 kB] 360s Get:216 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-igraph amd64 1.6.0-1 [4399 kB] 360s Get:217 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dynamictreecut all 1.63-1-3build1 [91.4 kB] 360s Get:218 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastcluster amd64 1.2.6-1 [192 kB] 360s Get:219 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrixstats amd64 1.2.0-1 [488 kB] 360s Get:220 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 360s Get:221 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 360s Get:222 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-farver amd64 2.1.1-1 [1353 kB] 360s Get:223 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 360s Get:224 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-munsell all 0.5.0-2build1 [208 kB] 360s Get:225 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 360s Get:226 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 360s Get:227 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 360s Get:228 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 360s Get:229 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-survival amd64 3.5-8-1 [6120 kB] 360s Get:230 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rpart amd64 4.1.23-1 [661 kB] 360s Get:231 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nnet amd64 7.3-19-2 [112 kB] 360s Get:232 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-foreign amd64 0.8.86-1 [242 kB] 360s Get:233 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 360s Get:234 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-data.table amd64 1.14.10+dfsg-1 [1837 kB] 360s Get:235 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-evaluate all 0.23-1 [90.2 kB] 360s Get:236 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xfun amd64 0.41+dfsg-1 [415 kB] 360s Get:237 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 360s Get:238 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-yaml amd64 2.3.8-1 [108 kB] 360s Get:239 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 360s Get:240 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 360s Get:241 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-backports amd64 1.4.1-1 [101 kB] 360s Get:242 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-checkmate amd64 2.3.1-1 [713 kB] 360s Get:243 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 360s Get:244 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 360s Get:245 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltools amd64 0.5.7-1 [369 kB] 360s Get:246 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 360s Get:247 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fs amd64 1.6.3+dfsg-1 [229 kB] 360s Get:248 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sass amd64 0.4.8+dfsg-1 [996 kB] 360s Get:249 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 360s Get:250 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 360s Get:251 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytex all 0.49-1 [141 kB] 360s Get:252 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 360s Get:253 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 360s Get:254 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 360s Get:255 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 360s Get:256 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-promises amd64 1.2.1+dfsg-1 [284 kB] 360s Get:257 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httpuv amd64 1.6.14+dfsg-1 [510 kB] 360s Get:258 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 360s Get:259 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 360s Get:260 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 360s Get:261 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 360s Get:262 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 360s Get:263 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 360s Get:264 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 360s Get:265 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rstudioapi all 0.15.0-1 [277 kB] 360s Get:266 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltable all 2.4.2-1 [381 kB] 360s Get:267 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 360s Get:268 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-formula all 1.2-5-1 [158 kB] 360s Get:269 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-chron amd64 2.3-61-2 [186 kB] 360s Get:270 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jpeg amd64 0.1-10-1 [31.4 kB] 360s Get:271 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-deldir amd64 2.0-4-1 [270 kB] 360s Get:272 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcppeigen amd64 0.3.3.9.4-1 [1189 kB] 360s Get:273 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-interp amd64 1.1-6-1 [1454 kB] 360s Get:274 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-latticeextra all 0.6-30-1 [2198 kB] 360s Get:275 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-acepack amd64 1.4.2-1 [61.3 kB] 360s Get:276 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-hmisc amd64 5.1-1-1 [3491 kB] 360s Get:277 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-doparallel all 1.0.17-1 [189 kB] 360s Get:278 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-preprocesscore amd64 1.64.0+ds-1 [151 kB] 360s Get:279 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-wgcna amd64 1.72-5-1 [2902 kB] 360s Get:280 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r2html all 2.3.3+dfsg-1 [596 kB] 360s Get:281 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-netsam all 1.42.0-1 [1149 kB] 360s Get:282 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 362s Get:283 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-markdown all 1.12+dfsg-1 [179 kB] 362s Get:284 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 362s Preconfiguring packages ... 363s Fetched 406 MB in 4s (90.5 MB/s) 363s Selecting previously unselected package libc-dev-bin. 363s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 363s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 363s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 363s Selecting previously unselected package linux-libc-dev:amd64. 363s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 363s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 363s Selecting previously unselected package libcrypt-dev:amd64. 363s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 363s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 363s Selecting previously unselected package libtirpc-dev:amd64. 363s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 363s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 363s Selecting previously unselected package libnsl-dev:amd64. 363s Preparing to unpack .../004-libnsl-dev_1.3.0-3_amd64.deb ... 363s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 363s Selecting previously unselected package rpcsvc-proto. 363s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 363s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 363s Selecting previously unselected package libc6-dev:amd64. 363s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_amd64.deb ... 363s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 363s Selecting previously unselected package libisl23:amd64. 363s Preparing to unpack .../007-libisl23_0.26-3_amd64.deb ... 363s Unpacking libisl23:amd64 (0.26-3) ... 363s Selecting previously unselected package libmpc3:amd64. 363s Preparing to unpack .../008-libmpc3_1.3.1-1_amd64.deb ... 363s Unpacking libmpc3:amd64 (1.3.1-1) ... 363s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 363s Preparing to unpack .../009-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 363s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 364s Selecting previously unselected package cpp-13. 364s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 364s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 364s Selecting previously unselected package cpp-x86-64-linux-gnu. 364s Preparing to unpack .../011-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 364s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 364s Selecting previously unselected package cpp. 364s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 364s Unpacking cpp (4:13.2.0-7ubuntu1) ... 364s Selecting previously unselected package libcc1-0:amd64. 364s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libgomp1:amd64. 364s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libitm1:amd64. 364s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libatomic1:amd64. 364s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libasan8:amd64. 364s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package liblsan0:amd64. 364s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libtsan2:amd64. 364s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libubsan1:amd64. 364s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libhwasan0:amd64. 364s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libquadmath0:amd64. 364s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 364s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 364s Selecting previously unselected package libgcc-13-dev:amd64. 364s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 364s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 364s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 364s Preparing to unpack .../024-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 364s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 365s Selecting previously unselected package gcc-13. 365s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 365s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 365s Selecting previously unselected package gcc-x86-64-linux-gnu. 365s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 365s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 365s Selecting previously unselected package gcc. 365s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 365s Unpacking gcc (4:13.2.0-7ubuntu1) ... 365s Selecting previously unselected package libstdc++-13-dev:amd64. 365s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 365s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 365s Selecting previously unselected package g++-13-x86-64-linux-gnu. 365s Preparing to unpack .../029-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 365s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 365s Selecting previously unselected package g++-13. 365s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_amd64.deb ... 365s Unpacking g++-13 (13.2.0-17ubuntu2) ... 365s Selecting previously unselected package g++-x86-64-linux-gnu. 365s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 365s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 365s Selecting previously unselected package g++. 365s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 365s Unpacking g++ (4:13.2.0-7ubuntu1) ... 365s Selecting previously unselected package build-essential. 365s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 365s Unpacking build-essential (12.10ubuntu1) ... 365s Selecting previously unselected package dctrl-tools. 365s Preparing to unpack .../034-dctrl-tools_2.24-3build2_amd64.deb ... 365s Unpacking dctrl-tools (2.24-3build2) ... 365s Selecting previously unselected package fonts-dejavu-mono. 365s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 365s Unpacking fonts-dejavu-mono (2.37-8) ... 365s Selecting previously unselected package fonts-dejavu-core. 365s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 365s Unpacking fonts-dejavu-core (2.37-8) ... 365s Selecting previously unselected package fontconfig-config. 365s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 366s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 366s Selecting previously unselected package libfontconfig1:amd64. 366s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 366s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 366s Selecting previously unselected package fontconfig. 366s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 366s Unpacking fontconfig (2.15.0-1ubuntu1) ... 366s Selecting previously unselected package fonts-font-awesome. 366s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 366s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 366s Selecting previously unselected package fonts-glyphicons-halflings. 366s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 366s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 366s Selecting previously unselected package fonts-mathjax. 366s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 366s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 366s Selecting previously unselected package libgfortran5:amd64. 366s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 366s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 366s Selecting previously unselected package libgfortran-13-dev:amd64. 366s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 366s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 366s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 366s Preparing to unpack .../045-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 366s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 366s Selecting previously unselected package gfortran-13. 366s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 366s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 366s Selecting previously unselected package gfortran-x86-64-linux-gnu. 366s Preparing to unpack .../047-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 366s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 366s Selecting previously unselected package gfortran. 366s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 366s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 366s Selecting previously unselected package icu-devtools. 366s Preparing to unpack .../049-icu-devtools_74.2-1ubuntu1_amd64.deb ... 366s Unpacking icu-devtools (74.2-1ubuntu1) ... 366s Selecting previously unselected package javascript-common. 366s Preparing to unpack .../050-javascript-common_11+nmu1_all.deb ... 366s Unpacking javascript-common (11+nmu1) ... 366s Selecting previously unselected package libblas3:amd64. 366s Preparing to unpack .../051-libblas3_3.12.0-3_amd64.deb ... 366s Unpacking libblas3:amd64 (3.12.0-3) ... 367s Selecting previously unselected package libblas-dev:amd64. 367s Preparing to unpack .../052-libblas-dev_3.12.0-3_amd64.deb ... 367s Unpacking libblas-dev:amd64 (3.12.0-3) ... 367s Selecting previously unselected package libbz2-dev:amd64. 367s Preparing to unpack .../053-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 367s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 367s Selecting previously unselected package libpixman-1-0:amd64. 367s Preparing to unpack .../054-libpixman-1-0_0.42.2-1_amd64.deb ... 367s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 367s Selecting previously unselected package libxcb-render0:amd64. 367s Preparing to unpack .../055-libxcb-render0_1.15-1_amd64.deb ... 367s Unpacking libxcb-render0:amd64 (1.15-1) ... 367s Selecting previously unselected package libxcb-shm0:amd64. 367s Preparing to unpack .../056-libxcb-shm0_1.15-1_amd64.deb ... 367s Unpacking libxcb-shm0:amd64 (1.15-1) ... 367s Selecting previously unselected package libxrender1:amd64. 367s Preparing to unpack .../057-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 367s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 367s Selecting previously unselected package libcairo2:amd64. 367s Preparing to unpack .../058-libcairo2_1.18.0-1_amd64.deb ... 367s Unpacking libcairo2:amd64 (1.18.0-1) ... 367s Selecting previously unselected package libdatrie1:amd64. 367s Preparing to unpack .../059-libdatrie1_0.2.13-3_amd64.deb ... 367s Unpacking libdatrie1:amd64 (0.2.13-3) ... 367s Selecting previously unselected package libdeflate0:amd64. 367s Preparing to unpack .../060-libdeflate0_1.19-1_amd64.deb ... 367s Unpacking libdeflate0:amd64 (1.19-1) ... 367s Selecting previously unselected package libgraphite2-3:amd64. 367s Preparing to unpack .../061-libgraphite2-3_1.3.14-2_amd64.deb ... 367s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 367s Selecting previously unselected package libharfbuzz0b:amd64. 367s Preparing to unpack .../062-libharfbuzz0b_8.3.0-2_amd64.deb ... 367s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 367s Selecting previously unselected package x11-common. 367s Preparing to unpack .../063-x11-common_1%3a7.7+23ubuntu2_all.deb ... 367s Unpacking x11-common (1:7.7+23ubuntu2) ... 367s Selecting previously unselected package libice6:amd64. 367s Preparing to unpack .../064-libice6_2%3a1.0.10-1build2_amd64.deb ... 367s Unpacking libice6:amd64 (2:1.0.10-1build2) ... 367s Selecting previously unselected package libicu-dev:amd64. 367s Preparing to unpack .../065-libicu-dev_74.2-1ubuntu1_amd64.deb ... 367s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ... 367s Selecting previously unselected package libjpeg-turbo8:amd64. 367s Preparing to unpack .../066-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 367s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 367s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 367s Preparing to unpack .../067-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ... 367s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 367s Selecting previously unselected package libjpeg8:amd64. 367s Preparing to unpack .../068-libjpeg8_8c-2ubuntu11_amd64.deb ... 367s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 367s Selecting previously unselected package libjpeg8-dev:amd64. 367s Preparing to unpack .../069-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 367s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 367s Selecting previously unselected package libjpeg-dev:amd64. 367s Preparing to unpack .../070-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 367s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 367s Selecting previously unselected package libjs-bootstrap. 367s Preparing to unpack .../071-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 367s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 367s Selecting previously unselected package libjs-popper.js. 367s Preparing to unpack .../072-libjs-popper.js_1.16.1+ds-6_all.deb ... 367s Unpacking libjs-popper.js (1.16.1+ds-6) ... 367s Selecting previously unselected package libjs-bootstrap4. 367s Preparing to unpack .../073-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 367s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 367s Selecting previously unselected package libjs-d3. 368s Preparing to unpack .../074-libjs-d3_3.5.17-4_all.deb ... 368s Unpacking libjs-d3 (3.5.17-4) ... 368s Selecting previously unselected package libjs-es5-shim. 368s Preparing to unpack .../075-libjs-es5-shim_4.6.7-2_all.deb ... 368s Unpacking libjs-es5-shim (4.6.7-2) ... 368s Selecting previously unselected package libjs-highlight.js. 368s Preparing to unpack .../076-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 368s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 368s Selecting previously unselected package libjs-jquery. 368s Preparing to unpack .../077-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 368s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 368s Selecting previously unselected package libjs-jquery-datatables. 368s Preparing to unpack .../078-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 368s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 368s Selecting previously unselected package libjs-sifter.js. 368s Preparing to unpack .../079-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 368s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 368s Selecting previously unselected package libjs-microplugin.js. 368s Preparing to unpack .../080-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 368s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 368s Selecting previously unselected package libjs-jquery-selectize.js. 368s Preparing to unpack .../081-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 368s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 368s Selecting previously unselected package libjs-jquery-ui. 368s Preparing to unpack .../082-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 368s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 368s Selecting previously unselected package libjs-json. 368s Preparing to unpack .../083-libjs-json_0~20221030+~1.0.8-1_all.deb ... 368s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 368s Selecting previously unselected package libjs-prettify. 368s Preparing to unpack .../084-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 368s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 368s Selecting previously unselected package liblapack3:amd64. 368s Preparing to unpack .../085-liblapack3_3.12.0-3_amd64.deb ... 368s Unpacking liblapack3:amd64 (3.12.0-3) ... 368s Selecting previously unselected package liblapack-dev:amd64. 368s Preparing to unpack .../086-liblapack-dev_3.12.0-3_amd64.deb ... 368s Unpacking liblapack-dev:amd64 (3.12.0-3) ... 368s Selecting previously unselected package liblerc4:amd64. 368s Preparing to unpack .../087-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 368s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 368s Selecting previously unselected package liblua5.4-0:amd64. 368s Preparing to unpack .../088-liblua5.4-0_5.4.6-3_amd64.deb ... 368s Unpacking liblua5.4-0:amd64 (5.4.6-3) ... 368s Selecting previously unselected package libncurses-dev:amd64. 368s Preparing to unpack .../089-libncurses-dev_6.4+20240113-1ubuntu1_amd64.deb ... 368s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 368s Selecting previously unselected package libthai-data. 368s Preparing to unpack .../090-libthai-data_0.1.29-2_all.deb ... 368s Unpacking libthai-data (0.1.29-2) ... 368s Selecting previously unselected package libthai0:amd64. 368s Preparing to unpack .../091-libthai0_0.1.29-2_amd64.deb ... 368s Unpacking libthai0:amd64 (0.1.29-2) ... 368s Selecting previously unselected package libpango-1.0-0:amd64. 368s Preparing to unpack .../092-libpango-1.0-0_1.51.0+ds-4_amd64.deb ... 368s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ... 368s Selecting previously unselected package libpangoft2-1.0-0:amd64. 368s Preparing to unpack .../093-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ... 368s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 368s Selecting previously unselected package libpangocairo-1.0-0:amd64. 368s Preparing to unpack .../094-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ... 368s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 368s Selecting previously unselected package libpaper1:amd64. 368s Preparing to unpack .../095-libpaper1_1.1.29_amd64.deb ... 368s Unpacking libpaper1:amd64 (1.1.29) ... 368s Selecting previously unselected package libpaper-utils. 368s Preparing to unpack .../096-libpaper-utils_1.1.29_amd64.deb ... 368s Unpacking libpaper-utils (1.1.29) ... 368s Selecting previously unselected package libpcre2-16-0:amd64. 368s Preparing to unpack .../097-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ... 368s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 369s Selecting previously unselected package libpcre2-32-0:amd64. 369s Preparing to unpack .../098-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ... 369s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 369s Selecting previously unselected package libpcre2-posix3:amd64. 369s Preparing to unpack .../099-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ... 369s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 369s Selecting previously unselected package libpcre2-dev:amd64. 369s Preparing to unpack .../100-libpcre2-dev_10.42-4ubuntu1_amd64.deb ... 369s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ... 369s Selecting previously unselected package libpkgconf3:amd64. 369s Preparing to unpack .../101-libpkgconf3_1.8.1-2_amd64.deb ... 369s Unpacking libpkgconf3:amd64 (1.8.1-2) ... 369s Selecting previously unselected package zlib1g-dev:amd64. 369s Preparing to unpack .../102-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ... 369s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 369s Selecting previously unselected package libpng-dev:amd64. 369s Preparing to unpack .../103-libpng-dev_1.6.43-1_amd64.deb ... 369s Unpacking libpng-dev:amd64 (1.6.43-1) ... 369s Selecting previously unselected package libreadline-dev:amd64. 369s Preparing to unpack .../104-libreadline-dev_8.2-3_amd64.deb ... 369s Unpacking libreadline-dev:amd64 (8.2-3) ... 369s Selecting previously unselected package libsharpyuv0:amd64. 369s Preparing to unpack .../105-libsharpyuv0_1.3.2-0.4_amd64.deb ... 369s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ... 369s Selecting previously unselected package libsm6:amd64. 369s Preparing to unpack .../106-libsm6_2%3a1.2.3-1build2_amd64.deb ... 369s Unpacking libsm6:amd64 (2:1.2.3-1build2) ... 369s Selecting previously unselected package libtcl8.6:amd64. 369s Preparing to unpack .../107-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... 369s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... 369s Selecting previously unselected package libjbig0:amd64. 369s Preparing to unpack .../108-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 369s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 369s Selecting previously unselected package libwebp7:amd64. 369s Preparing to unpack .../109-libwebp7_1.3.2-0.4_amd64.deb ... 369s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 369s Selecting previously unselected package libtiff6:amd64. 369s Preparing to unpack .../110-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 369s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 369s Selecting previously unselected package libxft2:amd64. 369s Preparing to unpack .../111-libxft2_2.3.6-1_amd64.deb ... 369s Unpacking libxft2:amd64 (2.3.6-1) ... 369s Selecting previously unselected package libxss1:amd64. 369s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build2_amd64.deb ... 369s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 369s Selecting previously unselected package libtk8.6:amd64. 369s Preparing to unpack .../113-libtk8.6_8.6.13-2_amd64.deb ... 369s Unpacking libtk8.6:amd64 (8.6.13-2) ... 369s Selecting previously unselected package libxt6:amd64. 369s Preparing to unpack .../114-libxt6_1%3a1.2.1-1.1_amd64.deb ... 369s Unpacking libxt6:amd64 (1:1.2.1-1.1) ... 369s Selecting previously unselected package zip. 369s Preparing to unpack .../115-zip_3.0-13_amd64.deb ... 369s Unpacking zip (3.0-13) ... 369s Selecting previously unselected package unzip. 369s Preparing to unpack .../116-unzip_6.0-28ubuntu3_amd64.deb ... 369s Unpacking unzip (6.0-28ubuntu3) ... 369s Selecting previously unselected package xdg-utils. 369s Preparing to unpack .../117-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 369s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 369s Selecting previously unselected package r-base-core. 369s Preparing to unpack .../118-r-base-core_4.3.2-1build1_amd64.deb ... 369s Unpacking r-base-core (4.3.2-1build1) ... 370s Selecting previously unselected package r-cran-littler. 370s Preparing to unpack .../119-r-cran-littler_0.3.19-1_amd64.deb ... 370s Unpacking r-cran-littler (0.3.19-1) ... 370s Selecting previously unselected package littler. 370s Preparing to unpack .../120-littler_0.3.19-1_all.deb ... 370s Unpacking littler (0.3.19-1) ... 370s Selecting previously unselected package node-bootstrap-sass. 370s Preparing to unpack .../121-node-bootstrap-sass_3.4.3-2_all.deb ... 370s Unpacking node-bootstrap-sass (3.4.3-2) ... 370s Selecting previously unselected package node-html5shiv. 370s Preparing to unpack .../122-node-html5shiv_3.7.3+dfsg-5_all.deb ... 370s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 370s Selecting previously unselected package node-normalize.css. 370s Preparing to unpack .../123-node-normalize.css_8.0.1-5_all.deb ... 370s Unpacking node-normalize.css (8.0.1-5) ... 370s Selecting previously unselected package pandoc-data. 370s Preparing to unpack .../124-pandoc-data_3.1.3-1_all.deb ... 370s Unpacking pandoc-data (3.1.3-1) ... 370s Selecting previously unselected package pandoc. 370s Preparing to unpack .../125-pandoc_3.1.3+ds-2_amd64.deb ... 370s Unpacking pandoc (3.1.3+ds-2) ... 371s Selecting previously unselected package pkgconf-bin. 371s Preparing to unpack .../126-pkgconf-bin_1.8.1-2_amd64.deb ... 371s Unpacking pkgconf-bin (1.8.1-2) ... 371s Selecting previously unselected package pkgconf:amd64. 371s Preparing to unpack .../127-pkgconf_1.8.1-2_amd64.deb ... 371s Unpacking pkgconf:amd64 (1.8.1-2) ... 371s Selecting previously unselected package pkg-config:amd64. 371s Preparing to unpack .../128-pkg-config_1.8.1-2_amd64.deb ... 371s Unpacking pkg-config:amd64 (1.8.1-2) ... 371s Selecting previously unselected package liblzma-dev:amd64. 371s Preparing to unpack .../129-liblzma-dev_5.4.5-0.3_amd64.deb ... 371s Unpacking liblzma-dev:amd64 (5.4.5-0.3) ... 371s Selecting previously unselected package r-base-dev. 371s Preparing to unpack .../130-r-base-dev_4.3.2-1build1_all.deb ... 371s Unpacking r-base-dev (4.3.2-1build1) ... 371s Selecting previously unselected package pkg-r-autopkgtest. 371s Preparing to unpack .../131-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 371s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 371s Selecting previously unselected package r-bioc-biocgenerics. 371s Preparing to unpack .../132-r-bioc-biocgenerics_0.48.1-2_all.deb ... 371s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 371s Selecting previously unselected package r-bioc-biobase. 371s Preparing to unpack .../133-r-bioc-biobase_2.62.0-1_amd64.deb ... 371s Unpacking r-bioc-biobase (2.62.0-1) ... 371s Selecting previously unselected package r-bioc-s4vectors. 371s Preparing to unpack .../134-r-bioc-s4vectors_0.40.2+dfsg-1_amd64.deb ... 371s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 371s Selecting previously unselected package r-bioc-iranges. 371s Preparing to unpack .../135-r-bioc-iranges_2.36.0-1_amd64.deb ... 371s Unpacking r-bioc-iranges (2.36.0-1) ... 371s Selecting previously unselected package r-cran-dbi. 371s Preparing to unpack .../136-r-cran-dbi_1.2.2-1_all.deb ... 371s Unpacking r-cran-dbi (1.2.2-1) ... 371s Selecting previously unselected package r-cran-bit. 371s Preparing to unpack .../137-r-cran-bit_4.0.5-1_amd64.deb ... 371s Unpacking r-cran-bit (4.0.5-1) ... 371s Selecting previously unselected package r-cran-bit64. 371s Preparing to unpack .../138-r-cran-bit64_4.0.5-1_amd64.deb ... 371s Unpacking r-cran-bit64 (4.0.5-1) ... 371s Selecting previously unselected package r-cran-rlang. 371s Preparing to unpack .../139-r-cran-rlang_1.1.3-1_amd64.deb ... 371s Unpacking r-cran-rlang (1.1.3-1) ... 371s Selecting previously unselected package r-cran-cli. 371s Preparing to unpack .../140-r-cran-cli_3.6.2-1_amd64.deb ... 371s Unpacking r-cran-cli (3.6.2-1) ... 371s Selecting previously unselected package r-cran-glue. 371s Preparing to unpack .../141-r-cran-glue_1.7.0-1_amd64.deb ... 371s Unpacking r-cran-glue (1.7.0-1) ... 371s Selecting previously unselected package r-cran-lifecycle. 371s Preparing to unpack .../142-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 371s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 371s Selecting previously unselected package r-cran-vctrs. 371s Preparing to unpack .../143-r-cran-vctrs_0.6.5-1_amd64.deb ... 371s Unpacking r-cran-vctrs (0.6.5-1) ... 371s Selecting previously unselected package r-cran-blob. 372s Preparing to unpack .../144-r-cran-blob_1.2.4-1_all.deb ... 372s Unpacking r-cran-blob (1.2.4-1) ... 372s Selecting previously unselected package r-cran-fastmap. 372s Preparing to unpack .../145-r-cran-fastmap_1.1.1-1_amd64.deb ... 372s Unpacking r-cran-fastmap (1.1.1-1) ... 372s Selecting previously unselected package r-cran-cachem. 372s Preparing to unpack .../146-r-cran-cachem_1.0.8-1_amd64.deb ... 372s Unpacking r-cran-cachem (1.0.8-1) ... 372s Selecting previously unselected package r-cran-memoise. 372s Preparing to unpack .../147-r-cran-memoise_2.0.1-1_all.deb ... 372s Unpacking r-cran-memoise (2.0.1-1) ... 372s Selecting previously unselected package r-cran-pkgconfig. 372s Preparing to unpack .../148-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 372s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 372s Selecting previously unselected package r-cran-plogr. 372s Preparing to unpack .../149-r-cran-plogr_0.2.0-3build1_all.deb ... 372s Unpacking r-cran-plogr (0.2.0-3build1) ... 372s Selecting previously unselected package r-cran-cpp11. 372s Preparing to unpack .../150-r-cran-cpp11_0.4.7-1_all.deb ... 372s Unpacking r-cran-cpp11 (0.4.7-1) ... 372s Selecting previously unselected package r-cran-rsqlite. 372s Preparing to unpack .../151-r-cran-rsqlite_2.3.4-1_amd64.deb ... 372s Unpacking r-cran-rsqlite (2.3.4-1) ... 372s Selecting previously unselected package r-cran-curl. 372s Preparing to unpack .../152-r-cran-curl_5.2.0+dfsg-1_amd64.deb ... 372s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 372s Selecting previously unselected package r-cran-jsonlite. 372s Preparing to unpack .../153-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 372s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 372s Selecting previously unselected package r-cran-mime. 372s Preparing to unpack .../154-r-cran-mime_0.12-1_amd64.deb ... 372s Unpacking r-cran-mime (0.12-1) ... 372s Selecting previously unselected package r-cran-sys. 372s Preparing to unpack .../155-r-cran-sys_3.4.2-1_amd64.deb ... 372s Unpacking r-cran-sys (3.4.2-1) ... 372s Selecting previously unselected package r-cran-askpass. 372s Preparing to unpack .../156-r-cran-askpass_1.2.0-1_amd64.deb ... 372s Unpacking r-cran-askpass (1.2.0-1) ... 372s Selecting previously unselected package r-cran-openssl. 372s Preparing to unpack .../157-r-cran-openssl_2.1.1+dfsg-2_amd64.deb ... 372s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 372s Selecting previously unselected package r-cran-r6. 372s Preparing to unpack .../158-r-cran-r6_2.5.1-1_all.deb ... 372s Unpacking r-cran-r6 (2.5.1-1) ... 372s Selecting previously unselected package r-cran-httr. 372s Preparing to unpack .../159-r-cran-httr_1.4.7+dfsg-1_all.deb ... 372s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 372s Selecting previously unselected package r-cran-png. 372s Preparing to unpack .../160-r-cran-png_0.1-8-1_amd64.deb ... 372s Unpacking r-cran-png (0.1-8-1) ... 372s Selecting previously unselected package r-bioc-zlibbioc. 372s Preparing to unpack .../161-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 372s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 372s Selecting previously unselected package r-bioc-xvector. 372s Preparing to unpack .../162-r-bioc-xvector_0.42.0-1_amd64.deb ... 372s Unpacking r-bioc-xvector (0.42.0-1) ... 372s Selecting previously unselected package r-cran-bitops. 372s Preparing to unpack .../163-r-cran-bitops_1.0-7-1_amd64.deb ... 372s Unpacking r-cran-bitops (1.0-7-1) ... 372s Selecting previously unselected package r-cran-rcurl. 372s Preparing to unpack .../164-r-cran-rcurl_1.98-1.14+dfsg-1_amd64.deb ... 372s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 372s Selecting previously unselected package r-bioc-genomeinfodbdata. 372s Preparing to unpack .../165-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 372s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 372s Selecting previously unselected package r-bioc-genomeinfodb. 372s Preparing to unpack .../166-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 372s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 372s Selecting previously unselected package r-cran-crayon. 372s Preparing to unpack .../167-r-cran-crayon_1.5.2-1_all.deb ... 372s Unpacking r-cran-crayon (1.5.2-1) ... 372s Selecting previously unselected package r-bioc-biostrings. 372s Preparing to unpack .../168-r-bioc-biostrings_2.70.2+dfsg-1_amd64.deb ... 372s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 373s Selecting previously unselected package r-bioc-keggrest. 373s Preparing to unpack .../169-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 373s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 373s Selecting previously unselected package r-bioc-annotationdbi. 373s Preparing to unpack .../170-r-bioc-annotationdbi_1.64.1-1_all.deb ... 373s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 373s Selecting previously unselected package r-cran-generics. 373s Preparing to unpack .../171-r-cran-generics_0.1.3-1_all.deb ... 373s Unpacking r-cran-generics (0.1.3-1) ... 373s Selecting previously unselected package r-cran-magrittr. 373s Preparing to unpack .../172-r-cran-magrittr_2.0.3-1_amd64.deb ... 373s Unpacking r-cran-magrittr (2.0.3-1) ... 373s Selecting previously unselected package r-cran-fansi. 373s Preparing to unpack .../173-r-cran-fansi_1.0.5-1_amd64.deb ... 373s Unpacking r-cran-fansi (1.0.5-1) ... 373s Selecting previously unselected package r-cran-utf8. 373s Preparing to unpack .../174-r-cran-utf8_1.2.4-1_amd64.deb ... 373s Unpacking r-cran-utf8 (1.2.4-1) ... 373s Selecting previously unselected package r-cran-pillar. 373s Preparing to unpack .../175-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 373s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 373s Selecting previously unselected package r-cran-tibble. 373s Preparing to unpack .../176-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 373s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 373s Selecting previously unselected package r-cran-withr. 373s Preparing to unpack .../177-r-cran-withr_2.5.0-1_all.deb ... 373s Unpacking r-cran-withr (2.5.0-1) ... 373s Selecting previously unselected package r-cran-tidyselect. 373s Preparing to unpack .../178-r-cran-tidyselect_1.2.0+dfsg-1_amd64.deb ... 373s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 373s Selecting previously unselected package r-cran-dplyr. 373s Preparing to unpack .../179-r-cran-dplyr_1.1.4-1_amd64.deb ... 373s Unpacking r-cran-dplyr (1.1.4-1) ... 373s Selecting previously unselected package r-cran-purrr. 373s Preparing to unpack .../180-r-cran-purrr_1.0.2-1_amd64.deb ... 373s Unpacking r-cran-purrr (1.0.2-1) ... 373s Selecting previously unselected package r-cran-stringi. 373s Preparing to unpack .../181-r-cran-stringi_1.8.3-1_amd64.deb ... 373s Unpacking r-cran-stringi (1.8.3-1) ... 373s Selecting previously unselected package r-cran-stringr. 373s Preparing to unpack .../182-r-cran-stringr_1.5.1-1_all.deb ... 373s Unpacking r-cran-stringr (1.5.1-1) ... 373s Selecting previously unselected package r-cran-tidyr. 373s Preparing to unpack .../183-r-cran-tidyr_1.3.1-1_amd64.deb ... 373s Unpacking r-cran-tidyr (1.3.1-1) ... 373s Selecting previously unselected package r-cran-dbplyr. 373s Preparing to unpack .../184-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 373s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 373s Selecting previously unselected package r-cran-filelock. 373s Preparing to unpack .../185-r-cran-filelock_1.0.3-1_amd64.deb ... 373s Unpacking r-cran-filelock (1.0.3-1) ... 373s Selecting previously unselected package r-bioc-biocfilecache. 373s Preparing to unpack .../186-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 373s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 373s Selecting previously unselected package r-cran-xml. 373s Preparing to unpack .../187-r-cran-xml_3.99-0.16.1-1_amd64.deb ... 373s Unpacking r-cran-xml (3.99-0.16.1-1) ... 373s Selecting previously unselected package r-cran-hms. 373s Preparing to unpack .../188-r-cran-hms_1.1.3-1_all.deb ... 373s Unpacking r-cran-hms (1.1.3-1) ... 373s Selecting previously unselected package r-cran-prettyunits. 373s Preparing to unpack .../189-r-cran-prettyunits_1.2.0-1_all.deb ... 373s Unpacking r-cran-prettyunits (1.2.0-1) ... 374s Selecting previously unselected package r-cran-progress. 374s Preparing to unpack .../190-r-cran-progress_1.2.3-1_all.deb ... 374s Unpacking r-cran-progress (1.2.3-1) ... 374s Selecting previously unselected package r-cran-digest. 374s Preparing to unpack .../191-r-cran-digest_0.6.34-1_amd64.deb ... 374s Unpacking r-cran-digest (0.6.34-1) ... 374s Selecting previously unselected package r-cran-rappdirs. 374s Preparing to unpack .../192-r-cran-rappdirs_0.3.3-1_amd64.deb ... 374s Unpacking r-cran-rappdirs (0.3.3-1) ... 374s Selecting previously unselected package r-cran-xml2. 374s Preparing to unpack .../193-r-cran-xml2_1.3.6-1_amd64.deb ... 374s Unpacking r-cran-xml2 (1.3.6-1) ... 374s Selecting previously unselected package r-bioc-biomart. 374s Preparing to unpack .../194-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 374s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 374s Selecting previously unselected package r-bioc-go.db. 374s Preparing to unpack .../195-r-bioc-go.db_3.18.0-1_all.deb ... 374s Unpacking r-bioc-go.db (3.18.0-1) ... 374s Selecting previously unselected package r-bioc-impute. 374s Preparing to unpack .../196-r-bioc-impute_1.76.0-1_amd64.deb ... 374s Unpacking r-bioc-impute (1.76.0-1) ... 374s Selecting previously unselected package r-cran-ca. 374s Preparing to unpack .../197-r-cran-ca_0.71.1-2build1_all.deb ... 374s Unpacking r-cran-ca (0.71.1-2build1) ... 374s Selecting previously unselected package r-cran-cluster. 374s Preparing to unpack .../198-r-cran-cluster_2.1.6-1_amd64.deb ... 374s Unpacking r-cran-cluster (2.1.6-1) ... 374s Selecting previously unselected package r-cran-colorspace. 374s Preparing to unpack .../199-r-cran-colorspace_2.1-0+dfsg-1_amd64.deb ... 374s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 374s Selecting previously unselected package r-cran-codetools. 374s Preparing to unpack .../200-r-cran-codetools_0.2-19-1_all.deb ... 374s Unpacking r-cran-codetools (0.2-19-1) ... 374s Selecting previously unselected package r-cran-iterators. 374s Preparing to unpack .../201-r-cran-iterators_1.0.14-1_all.deb ... 374s Unpacking r-cran-iterators (1.0.14-1) ... 374s Selecting previously unselected package r-cran-foreach. 374s Preparing to unpack .../202-r-cran-foreach_1.5.2-1_all.deb ... 374s Unpacking r-cran-foreach (1.5.2-1) ... 374s Selecting previously unselected package r-cran-gclus. 374s Preparing to unpack .../203-r-cran-gclus_1.3.2-2build1_all.deb ... 374s Unpacking r-cran-gclus (1.3.2-2build1) ... 375s Selecting previously unselected package r-cran-mass. 375s Preparing to unpack .../204-r-cran-mass_7.3-60.0.1-1_amd64.deb ... 375s Unpacking r-cran-mass (7.3-60.0.1-1) ... 375s Selecting previously unselected package r-cran-qap. 375s Preparing to unpack .../205-r-cran-qap_0.1-2-1_amd64.deb ... 375s Unpacking r-cran-qap (0.1-2-1) ... 375s Selecting previously unselected package r-cran-registry. 375s Preparing to unpack .../206-r-cran-registry_0.5-1-2build1_all.deb ... 375s Unpacking r-cran-registry (0.5-1-2build1) ... 375s Selecting previously unselected package r-cran-tsp. 375s Preparing to unpack .../207-r-cran-tsp_1.2-4-1_amd64.deb ... 375s Unpacking r-cran-tsp (1.2-4-1) ... 375s Selecting previously unselected package r-cran-permute. 375s Preparing to unpack .../208-r-cran-permute_0.9-7-1_all.deb ... 375s Unpacking r-cran-permute (0.9-7-1) ... 375s Selecting previously unselected package r-cran-lattice. 375s Preparing to unpack .../209-r-cran-lattice_0.22-5-1_amd64.deb ... 375s Unpacking r-cran-lattice (0.22-5-1) ... 375s Selecting previously unselected package r-cran-nlme. 375s Preparing to unpack .../210-r-cran-nlme_3.1.164-1_amd64.deb ... 375s Unpacking r-cran-nlme (3.1.164-1) ... 375s Selecting previously unselected package r-cran-matrix. 375s Preparing to unpack .../211-r-cran-matrix_1.6-5-1_amd64.deb ... 375s Unpacking r-cran-matrix (1.6-5-1) ... 375s Selecting previously unselected package r-cran-mgcv. 375s Preparing to unpack .../212-r-cran-mgcv_1.9-1-1_amd64.deb ... 375s Unpacking r-cran-mgcv (1.9-1-1) ... 375s Selecting previously unselected package r-cran-vegan. 375s Preparing to unpack .../213-r-cran-vegan_2.6-4+dfsg-1_amd64.deb ... 375s Unpacking r-cran-vegan (2.6-4+dfsg-1) ... 375s Selecting previously unselected package r-cran-seriation. 375s Preparing to unpack .../214-r-cran-seriation_1.5.4-1_amd64.deb ... 375s Unpacking r-cran-seriation (1.5.4-1) ... 375s Selecting previously unselected package r-cran-igraph. 375s Preparing to unpack .../215-r-cran-igraph_1.6.0-1_amd64.deb ... 375s Unpacking r-cran-igraph (1.6.0-1) ... 375s Selecting previously unselected package r-cran-dynamictreecut. 375s Preparing to unpack .../216-r-cran-dynamictreecut_1.63-1-3build1_all.deb ... 375s Unpacking r-cran-dynamictreecut (1.63-1-3build1) ... 375s Selecting previously unselected package r-cran-fastcluster. 375s Preparing to unpack .../217-r-cran-fastcluster_1.2.6-1_amd64.deb ... 375s Unpacking r-cran-fastcluster (1.2.6-1) ... 375s Selecting previously unselected package r-cran-matrixstats. 375s Preparing to unpack .../218-r-cran-matrixstats_1.2.0-1_amd64.deb ... 375s Unpacking r-cran-matrixstats (1.2.0-1) ... 375s Selecting previously unselected package r-cran-gtable. 375s Preparing to unpack .../219-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 375s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 375s Selecting previously unselected package r-cran-isoband. 375s Preparing to unpack .../220-r-cran-isoband_0.2.7-1_amd64.deb ... 375s Unpacking r-cran-isoband (0.2.7-1) ... 375s Selecting previously unselected package r-cran-farver. 375s Preparing to unpack .../221-r-cran-farver_2.1.1-1_amd64.deb ... 375s Unpacking r-cran-farver (2.1.1-1) ... 375s Selecting previously unselected package r-cran-labeling. 375s Preparing to unpack .../222-r-cran-labeling_0.4.3-1_all.deb ... 375s Unpacking r-cran-labeling (0.4.3-1) ... 375s Selecting previously unselected package r-cran-munsell. 375s Preparing to unpack .../223-r-cran-munsell_0.5.0-2build1_all.deb ... 375s Unpacking r-cran-munsell (0.5.0-2build1) ... 375s Selecting previously unselected package r-cran-rcolorbrewer. 375s Preparing to unpack .../224-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 375s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 376s Selecting previously unselected package r-cran-viridislite. 376s Preparing to unpack .../225-r-cran-viridislite_0.4.2-2_all.deb ... 376s Unpacking r-cran-viridislite (0.4.2-2) ... 376s Selecting previously unselected package r-cran-scales. 376s Preparing to unpack .../226-r-cran-scales_1.3.0-1_all.deb ... 376s Unpacking r-cran-scales (1.3.0-1) ... 376s Selecting previously unselected package r-cran-ggplot2. 376s Preparing to unpack .../227-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 376s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 376s Selecting previously unselected package r-cran-survival. 376s Preparing to unpack .../228-r-cran-survival_3.5-8-1_amd64.deb ... 376s Unpacking r-cran-survival (3.5-8-1) ... 376s Selecting previously unselected package r-cran-rpart. 376s Preparing to unpack .../229-r-cran-rpart_4.1.23-1_amd64.deb ... 376s Unpacking r-cran-rpart (4.1.23-1) ... 376s Selecting previously unselected package r-cran-nnet. 376s Preparing to unpack .../230-r-cran-nnet_7.3-19-2_amd64.deb ... 376s Unpacking r-cran-nnet (7.3-19-2) ... 376s Selecting previously unselected package r-cran-foreign. 376s Preparing to unpack .../231-r-cran-foreign_0.8.86-1_amd64.deb ... 376s Unpacking r-cran-foreign (0.8.86-1) ... 376s Selecting previously unselected package r-cran-gridextra. 376s Preparing to unpack .../232-r-cran-gridextra_2.3-3build1_all.deb ... 376s Unpacking r-cran-gridextra (2.3-3build1) ... 376s Selecting previously unselected package r-cran-data.table. 376s Preparing to unpack .../233-r-cran-data.table_1.14.10+dfsg-1_amd64.deb ... 376s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 376s Selecting previously unselected package r-cran-evaluate. 376s Preparing to unpack .../234-r-cran-evaluate_0.23-1_all.deb ... 376s Unpacking r-cran-evaluate (0.23-1) ... 376s Selecting previously unselected package r-cran-xfun. 376s Preparing to unpack .../235-r-cran-xfun_0.41+dfsg-1_amd64.deb ... 376s Unpacking r-cran-xfun (0.41+dfsg-1) ... 376s Selecting previously unselected package r-cran-highr. 376s Preparing to unpack .../236-r-cran-highr_0.10+dfsg-1_all.deb ... 376s Unpacking r-cran-highr (0.10+dfsg-1) ... 376s Selecting previously unselected package r-cran-yaml. 376s Preparing to unpack .../237-r-cran-yaml_2.3.8-1_amd64.deb ... 376s Unpacking r-cran-yaml (2.3.8-1) ... 376s Selecting previously unselected package libjs-mathjax. 376s Preparing to unpack .../238-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 376s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 377s Selecting previously unselected package r-cran-knitr. 377s Preparing to unpack .../239-r-cran-knitr_1.45+dfsg-1_all.deb ... 377s Unpacking r-cran-knitr (1.45+dfsg-1) ... 377s Selecting previously unselected package r-cran-backports. 377s Preparing to unpack .../240-r-cran-backports_1.4.1-1_amd64.deb ... 377s Unpacking r-cran-backports (1.4.1-1) ... 377s Selecting previously unselected package r-cran-checkmate. 377s Preparing to unpack .../241-r-cran-checkmate_2.3.1-1_amd64.deb ... 377s Unpacking r-cran-checkmate (2.3.1-1) ... 377s Selecting previously unselected package r-cran-base64enc. 377s Preparing to unpack .../242-r-cran-base64enc_0.1-3-3_amd64.deb ... 377s Unpacking r-cran-base64enc (0.1-3-3) ... 377s Selecting previously unselected package r-cran-ellipsis. 377s Preparing to unpack .../243-r-cran-ellipsis_0.3.2-2_amd64.deb ... 377s Unpacking r-cran-ellipsis (0.3.2-2) ... 377s Selecting previously unselected package r-cran-htmltools. 377s Preparing to unpack .../244-r-cran-htmltools_0.5.7-1_amd64.deb ... 377s Unpacking r-cran-htmltools (0.5.7-1) ... 377s Selecting previously unselected package r-cran-jquerylib. 377s Preparing to unpack .../245-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 377s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 377s Selecting previously unselected package r-cran-fs. 377s Preparing to unpack .../246-r-cran-fs_1.6.3+dfsg-1_amd64.deb ... 377s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 377s Selecting previously unselected package r-cran-sass. 377s Preparing to unpack .../247-r-cran-sass_0.4.8+dfsg-1_amd64.deb ... 377s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 377s Selecting previously unselected package r-cran-bslib. 377s Preparing to unpack .../248-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 377s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 378s Selecting previously unselected package r-cran-fontawesome. 378s Preparing to unpack .../249-r-cran-fontawesome_0.5.2-1_all.deb ... 378s Unpacking r-cran-fontawesome (0.5.2-1) ... 378s Selecting previously unselected package r-cran-tinytex. 378s Preparing to unpack .../250-r-cran-tinytex_0.49-1_all.deb ... 378s Unpacking r-cran-tinytex (0.49-1) ... 378s Selecting previously unselected package libjs-modernizr. 378s Preparing to unpack .../251-libjs-modernizr_2.6.2+ds1-5_all.deb ... 378s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 378s Selecting previously unselected package r-cran-pkgkitten. 378s Preparing to unpack .../252-r-cran-pkgkitten_0.2.3-1_all.deb ... 378s Unpacking r-cran-pkgkitten (0.2.3-1) ... 378s Selecting previously unselected package r-cran-rcpp. 378s Preparing to unpack .../253-r-cran-rcpp_1.0.12-1_amd64.deb ... 378s Unpacking r-cran-rcpp (1.0.12-1) ... 378s Selecting previously unselected package r-cran-later. 378s Preparing to unpack .../254-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 378s Unpacking r-cran-later (1.3.2+dfsg-1) ... 378s Selecting previously unselected package r-cran-promises. 378s Preparing to unpack .../255-r-cran-promises_1.2.1+dfsg-1_amd64.deb ... 378s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 378s Selecting previously unselected package r-cran-httpuv. 378s Preparing to unpack .../256-r-cran-httpuv_1.6.14+dfsg-1_amd64.deb ... 378s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 378s Selecting previously unselected package r-cran-xtable. 378s Preparing to unpack .../257-r-cran-xtable_1%3a1.8-4-2_all.deb ... 378s Unpacking r-cran-xtable (1:1.8-4-2) ... 378s Selecting previously unselected package r-cran-sourcetools. 378s Preparing to unpack .../258-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 378s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 378s Selecting previously unselected package r-cran-commonmark. 378s Preparing to unpack .../259-r-cran-commonmark_1.9.1-1_amd64.deb ... 378s Unpacking r-cran-commonmark (1.9.1-1) ... 378s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 378s Preparing to unpack .../260-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 378s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 378s Selecting previously unselected package r-cran-shiny. 378s Preparing to unpack .../261-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 378s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 378s Selecting previously unselected package r-cran-rmarkdown. 378s Preparing to unpack .../262-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 378s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 378s Selecting previously unselected package r-cran-htmlwidgets. 378s Preparing to unpack .../263-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 378s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 378s Selecting previously unselected package r-cran-rstudioapi. 378s Preparing to unpack .../264-r-cran-rstudioapi_0.15.0-1_all.deb ... 378s Unpacking r-cran-rstudioapi (0.15.0-1) ... 378s Selecting previously unselected package r-cran-htmltable. 378s Preparing to unpack .../265-r-cran-htmltable_2.4.2-1_all.deb ... 378s Unpacking r-cran-htmltable (2.4.2-1) ... 378s Selecting previously unselected package r-cran-viridis. 378s Preparing to unpack .../266-r-cran-viridis_0.6.5-1_all.deb ... 378s Unpacking r-cran-viridis (0.6.5-1) ... 379s Selecting previously unselected package r-cran-formula. 379s Preparing to unpack .../267-r-cran-formula_1.2-5-1_all.deb ... 379s Unpacking r-cran-formula (1.2-5-1) ... 379s Selecting previously unselected package r-cran-chron. 379s Preparing to unpack .../268-r-cran-chron_2.3-61-2_amd64.deb ... 379s Unpacking r-cran-chron (2.3-61-2) ... 379s Selecting previously unselected package r-cran-jpeg. 379s Preparing to unpack .../269-r-cran-jpeg_0.1-10-1_amd64.deb ... 379s Unpacking r-cran-jpeg (0.1-10-1) ... 379s Selecting previously unselected package r-cran-deldir. 379s Preparing to unpack .../270-r-cran-deldir_2.0-4-1_amd64.deb ... 379s Unpacking r-cran-deldir (2.0-4-1) ... 379s Selecting previously unselected package r-cran-rcppeigen. 379s Preparing to unpack .../271-r-cran-rcppeigen_0.3.3.9.4-1_amd64.deb ... 379s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 379s Selecting previously unselected package r-cran-interp. 379s Preparing to unpack .../272-r-cran-interp_1.1-6-1_amd64.deb ... 379s Unpacking r-cran-interp (1.1-6-1) ... 379s Selecting previously unselected package r-cran-latticeextra. 379s Preparing to unpack .../273-r-cran-latticeextra_0.6-30-1_all.deb ... 379s Unpacking r-cran-latticeextra (0.6-30-1) ... 379s Selecting previously unselected package r-cran-acepack. 379s Preparing to unpack .../274-r-cran-acepack_1.4.2-1_amd64.deb ... 379s Unpacking r-cran-acepack (1.4.2-1) ... 379s Selecting previously unselected package r-cran-hmisc. 379s Preparing to unpack .../275-r-cran-hmisc_5.1-1-1_amd64.deb ... 379s Unpacking r-cran-hmisc (5.1-1-1) ... 379s Selecting previously unselected package r-cran-doparallel. 379s Preparing to unpack .../276-r-cran-doparallel_1.0.17-1_all.deb ... 379s Unpacking r-cran-doparallel (1.0.17-1) ... 379s Selecting previously unselected package r-bioc-preprocesscore. 379s Preparing to unpack .../277-r-bioc-preprocesscore_1.64.0+ds-1_amd64.deb ... 379s Unpacking r-bioc-preprocesscore (1.64.0+ds-1) ... 379s Selecting previously unselected package r-cran-wgcna. 379s Preparing to unpack .../278-r-cran-wgcna_1.72-5-1_amd64.deb ... 379s Unpacking r-cran-wgcna (1.72-5-1) ... 379s Selecting previously unselected package r-cran-r2html. 379s Preparing to unpack .../279-r-cran-r2html_2.3.3+dfsg-1_all.deb ... 379s Unpacking r-cran-r2html (2.3.3+dfsg-1) ... 379s Selecting previously unselected package r-bioc-netsam. 379s Preparing to unpack .../280-r-bioc-netsam_1.42.0-1_all.deb ... 379s Unpacking r-bioc-netsam (1.42.0-1) ... 379s Selecting previously unselected package r-bioc-org.hs.eg.db. 379s Preparing to unpack .../281-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 379s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 382s Selecting previously unselected package r-cran-markdown. 382s Preparing to unpack .../282-r-cran-markdown_1.12+dfsg-1_all.deb ... 382s Unpacking r-cran-markdown (1.12+dfsg-1) ... 382s Selecting previously unselected package r-cran-runit. 382s Preparing to unpack .../283-r-cran-runit_0.4.33-1_all.deb ... 382s Unpacking r-cran-runit (0.4.33-1) ... 382s Setting up libjs-json (0~20221030+~1.0.8-1) ... 382s Setting up javascript-common (11+nmu1) ... 382s Setting up libgraphite2-3:amd64 (1.3.14-2) ... 382s Setting up libpixman-1-0:amd64 (0.42.2-1) ... 382s Setting up libsharpyuv0:amd64 (1.3.2-0.4) ... 382s Setting up libpaper1:amd64 (1.1.29) ... 382s 382s Creating config file /etc/papersize with new version 382s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 382s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 382s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 382s Setting up libxrender1:amd64 (1:0.9.10-1.1) ... 382s Setting up libdatrie1:amd64 (0.2.13-3) ... 382s Setting up libjs-popper.js (1.16.1+ds-6) ... 382s Setting up libxcb-render0:amd64 (1.15-1) ... 382s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 382s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 382s Setting up unzip (6.0-28ubuntu3) ... 382s Setting up x11-common (1:7.7+23ubuntu2) ... 382s Setting up node-html5shiv (3.7.3+dfsg-5) ... 382s Setting up libdeflate0:amd64 (1.19-1) ... 382s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 382s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 382s Setting up libxcb-shm0:amd64 (1.15-1) ... 382s Setting up libpaper-utils (1.1.29) ... 382s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libjs-modernizr (2.6.2+ds1-5) ... 382s Setting up libjbig0:amd64 (2.1-6.1ubuntu1) ... 382s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 382s Setting up libjs-es5-shim (4.6.7-2) ... 382s Setting up zip (3.0-13) ... 382s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 382s Setting up libblas3:amd64 (3.12.0-3) ... 382s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 382s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 382s Setting up libpkgconf3:amd64 (1.8.1-2) ... 382s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 382s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libjs-d3 (3.5.17-4) ... 382s Setting up fonts-dejavu-mono (2.37-8) ... 382s Setting up libmpc3:amd64 (1.3.1-1) ... 382s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... 382s Setting up icu-devtools (74.2-1ubuntu1) ... 382s Setting up fonts-dejavu-core (2.37-8) ... 382s Setting up pkgconf-bin (1.8.1-2) ... 382s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 382s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libwebp7:amd64 (1.3.2-0.4) ... 382s Setting up liblzma-dev:amd64 (5.4.5-0.3) ... 382s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 382s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 382s Setting up libnsl-dev:amd64 (1.3.0-3) ... 382s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 382s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 382s Setting up liblua5.4-0:amd64 (5.4.6-3) ... 382s Setting up libharfbuzz0b:amd64 (8.3.0-2) ... 382s Setting up libthai-data (0.1.29-2) ... 382s Setting up node-bootstrap-sass (3.4.3-2) ... 382s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 382s Setting up libxss1:amd64 (1:1.2.3-1build2) ... 382s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 382s Setting up pandoc-data (3.1.3-1) ... 382s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 382s Setting up libisl23:amd64 (0.26-3) ... 382s Setting up libc-dev-bin (2.39-0ubuntu2) ... 382s Setting up node-normalize.css (8.0.1-5) ... 382s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 382s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 382s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 382s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 382s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libblas-dev:amd64 (3.12.0-3) ... 382s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 382s Setting up dctrl-tools (2.24-3build2) ... 382s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 382s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 382s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 382s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 382s Setting up libice6:amd64 (2:1.0.10-1build2) ... 382s Setting up liblapack3:amd64 (3.12.0-3) ... 382s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 382s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 382s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 382s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 382s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 382s Setting up pkgconf:amd64 (1.8.1-2) ... 382s Setting up libthai0:amd64 (0.1.29-2) ... 382s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 382s Setting up pandoc (3.1.3+ds-2) ... 382s Setting up liblapack-dev:amd64 (3.12.0-3) ... 382s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 382s Setting up pkg-config:amd64 (1.8.1-2) ... 382s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 382s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 382s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 382s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 382s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 382s Setting up libsm6:amd64 (2:1.2.3-1build2) ... 382s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ... 382s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 382s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 382s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 382s Setting up fontconfig (2.15.0-1ubuntu1) ... 384s Regenerating fonts cache... done. 384s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 384s Setting up libxft2:amd64 (2.3.6-1) ... 384s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 384s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ... 384s Setting up cpp-13 (13.2.0-17ubuntu2) ... 384s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 384s Setting up libtk8.6:amd64 (8.6.13-2) ... 384s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ... 384s Setting up libreadline-dev:amd64 (8.2-3) ... 384s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 384s Setting up libcairo2:amd64 (1.18.0-1) ... 384s Setting up gcc-13 (13.2.0-17ubuntu2) ... 384s Setting up libxt6:amd64 (1:1.2.1-1.1) ... 384s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 384s Setting up cpp (4:13.2.0-7ubuntu1) ... 384s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 384s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 384s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 384s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 384s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 384s Setting up libpng-dev:amd64 (1.6.43-1) ... 384s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 384s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 384s Setting up gcc (4:13.2.0-7ubuntu1) ... 384s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 384s Setting up r-base-core (4.3.2-1build1) ... 385s 385s Creating config file /etc/R/Renviron with new version 385s Setting up r-cran-crayon (1.5.2-1) ... 385s Setting up r-cran-labeling (0.4.3-1) ... 385s Setting up r-cran-sourcetools (0.1.7-1-1) ... 385s Setting up r-cran-lattice (0.22-5-1) ... 385s Setting up r-cran-nlme (3.1.164-1) ... 385s Setting up r-cran-farver (2.1.1-1) ... 385s Setting up r-cran-formula (1.2-5-1) ... 385s Setting up r-cran-xml (3.99-0.16.1-1) ... 385s Setting up r-cran-viridislite (0.4.2-2) ... 385s Setting up r-cran-cluster (2.1.6-1) ... 385s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 385s Setting up r-cran-nnet (7.3-19-2) ... 385s Setting up r-cran-commonmark (1.9.1-1) ... 385s Setting up r-cran-r6 (2.5.1-1) ... 385s Setting up r-cran-pkgkitten (0.2.3-1) ... 385s Setting up r-cran-jpeg (0.1-10-1) ... 385s Setting up r-cran-ca (0.71.1-2build1) ... 385s Setting up r-cran-chron (2.3-61-2) ... 385s Setting up r-cran-fastcluster (1.2.6-1) ... 385s Setting up r-cran-magrittr (2.0.3-1) ... 385s Setting up r-cran-rappdirs (0.3.3-1) ... 385s Setting up r-cran-filelock (1.0.3-1) ... 385s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 385s Setting up r-cran-registry (0.5-1-2build1) ... 385s Setting up r-cran-littler (0.3.19-1) ... 385s Setting up r-cran-permute (0.9-7-1) ... 385s Setting up r-cran-fs (1.6.3+dfsg-1) ... 385s Setting up r-cran-rcpp (1.0.12-1) ... 385s Setting up r-cran-curl (5.2.0+dfsg-1) ... 385s Setting up r-cran-codetools (0.2-19-1) ... 385s Setting up g++-13 (13.2.0-17ubuntu2) ... 385s Setting up r-bioc-biocgenerics (0.48.1-2) ... 385s Setting up r-cran-rlang (1.1.3-1) ... 385s Setting up r-cran-matrixstats (1.2.0-1) ... 385s Setting up littler (0.3.19-1) ... 385s Setting up r-cran-dynamictreecut (1.63-1-3build1) ... 385s Setting up r-cran-xfun (0.41+dfsg-1) ... 385s Setting up r-cran-sys (3.4.2-1) ... 385s Setting up r-cran-gclus (1.3.2-2build1) ... 385s Setting up r-bioc-impute (1.76.0-1) ... 385s Setting up r-cran-plogr (0.2.0-3build1) ... 385s Setting up r-cran-withr (2.5.0-1) ... 385s Setting up r-cran-backports (1.4.1-1) ... 385s Setting up r-cran-mime (0.12-1) ... 385s Setting up r-cran-qap (0.1-2-1) ... 385s Setting up r-cran-r2html (2.3.3+dfsg-1) ... 385s Setting up r-cran-generics (0.1.3-1) ... 385s Setting up r-cran-base64enc (0.1-3-3) ... 385s Setting up r-cran-iterators (1.0.14-1) ... 385s Setting up r-cran-digest (0.6.34-1) ... 385s Setting up r-cran-yaml (2.3.8-1) ... 385s Setting up r-cran-evaluate (0.23-1) ... 385s Setting up r-cran-dbi (1.2.2-1) ... 385s Setting up r-cran-highr (0.10+dfsg-1) ... 385s Setting up r-cran-foreach (1.5.2-1) ... 385s Setting up r-cran-prettyunits (1.2.0-1) ... 385s Setting up r-cran-fansi (1.0.5-1) ... 385s Setting up r-cran-mass (7.3-60.0.1-1) ... 385s Setting up r-cran-checkmate (2.3.1-1) ... 385s Setting up r-cran-acepack (1.4.2-1) ... 385s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 385s Setting up r-cran-glue (1.7.0-1) ... 385s Setting up r-cran-foreign (0.8.86-1) ... 385s Setting up r-cran-bit (4.0.5-1) ... 385s Setting up r-cran-xtable (1:1.8-4-2) ... 385s Setting up r-cran-cli (3.6.2-1) ... 385s Setting up gfortran (4:13.2.0-7ubuntu1) ... 385s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 385s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 385s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 385s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 385s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 385s Setting up r-cran-bitops (1.0-7-1) ... 385s Setting up r-cran-bit64 (4.0.5-1) ... 385s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 385s Setting up r-cran-deldir (2.0-4-1) ... 385s Setting up r-cran-askpass (1.2.0-1) ... 385s Setting up r-cran-fastmap (1.1.1-1) ... 385s Setting up r-cran-png (0.1-8-1) ... 385s Setting up r-bioc-biobase (2.62.0-1) ... 385s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 385s Setting up r-cran-rstudioapi (0.15.0-1) ... 385s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 385s Setting up r-cran-utf8 (1.2.4-1) ... 385s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 385s Setting up r-cran-stringi (1.8.3-1) ... 385s Setting up r-cran-markdown (1.12+dfsg-1) ... 385s Setting up r-cran-cpp11 (0.4.7-1) ... 385s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 385s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 385s Setting up r-cran-isoband (0.2.7-1) ... 385s Setting up r-cran-runit (0.4.33-1) ... 385s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 385s Setting up r-cran-later (1.3.2+dfsg-1) ... 385s Setting up r-cran-matrix (1.6-5-1) ... 385s Setting up r-cran-doparallel (1.0.17-1) ... 385s Setting up r-cran-tinytex (0.49-1) ... 385s Setting up r-cran-knitr (1.45+dfsg-1) ... 385s Setting up r-cran-mgcv (1.9-1-1) ... 385s Setting up g++ (4:13.2.0-7ubuntu1) ... 385s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 385s Setting up r-cran-cachem (1.0.8-1) ... 385s Setting up build-essential (12.10ubuntu1) ... 385s Setting up r-bioc-preprocesscore (1.64.0+ds-1) ... 385s Setting up r-bioc-iranges (2.36.0-1) ... 385s Setting up r-cran-tsp (1.2-4-1) ... 385s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 385s Setting up r-cran-vctrs (0.6.5-1) ... 385s Setting up r-cran-rcppeigen (0.3.3.9.4-1) ... 385s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 385s Setting up r-cran-ellipsis (0.3.2-2) ... 385s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 385s Setting up r-base-dev (4.3.2-1build1) ... 385s Setting up r-cran-stringr (1.5.1-1) ... 385s Setting up r-cran-xml2 (1.3.6-1) ... 385s Setting up r-cran-munsell (0.5.0-2build1) ... 385s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 385s Setting up r-cran-survival (3.5-8-1) ... 385s Setting up r-cran-igraph (1.6.0-1) ... 385s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 385s Setting up r-cran-interp (1.1-6-1) ... 385s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 385s Setting up r-cran-httr (1.4.7+dfsg-1) ... 385s Setting up r-cran-gridextra (2.3-3build1) ... 385s Setting up r-cran-hms (1.1.3-1) ... 385s Setting up r-cran-scales (1.3.0-1) ... 385s Setting up r-cran-memoise (2.0.1-1) ... 385s Setting up r-cran-promises (1.2.1+dfsg-1) ... 385s Setting up r-cran-purrr (1.0.2-1) ... 385s Setting up r-cran-vegan (2.6-4+dfsg-1) ... 385s Setting up r-cran-blob (1.2.4-1) ... 385s Setting up r-cran-htmltools (0.5.7-1) ... 385s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 385s Setting up r-bioc-xvector (0.42.0-1) ... 385s Setting up r-cran-sass (0.4.8+dfsg-1) ... 385s Setting up r-cran-seriation (1.5.4-1) ... 385s Setting up r-cran-dplyr (1.1.4-1) ... 385s Setting up r-cran-rsqlite (2.3.4-1) ... 385s Setting up r-cran-progress (1.2.3-1) ... 385s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 385s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 385s Setting up r-cran-rpart (4.1.23-1) ... 385s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 385s Setting up r-cran-fontawesome (0.5.2-1) ... 385s Setting up r-cran-latticeextra (0.6-30-1) ... 385s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 385s Setting up r-cran-viridis (0.6.5-1) ... 385s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 385s Setting up r-cran-tidyr (1.3.1-1) ... 385s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 385s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 385s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 385s Setting up r-bioc-annotationdbi (1.64.1-1) ... 385s Setting up r-bioc-go.db (3.18.0-1) ... 385s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 385s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 385s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 385s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 385s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 385s Setting up r-cran-htmltable (2.4.2-1) ... 385s Setting up r-cran-hmisc (5.1-1-1) ... 385s Setting up r-cran-wgcna (1.72-5-1) ... 385s Setting up r-bioc-netsam (1.42.0-1) ... 385s Processing triggers for libc-bin (2.39-0ubuntu2) ... 385s Processing triggers for man-db (2.12.0-3) ... 386s Processing triggers for install-info (7.1-3) ... 392s Reading package lists... 392s Building dependency tree... 392s Reading state information... 392s Starting pkgProblemResolver with broken count: 0 392s Starting 2 pkgProblemResolver with broken count: 0 392s Done 393s The following NEW packages will be installed: 393s autopkgtest-satdep 393s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 393s Need to get 0 B/700 B of archives. 393s After this operation, 0 B of additional disk space will be used. 393s Get:1 /tmp/autopkgtest.3KXp0P/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B] 393s Selecting previously unselected package autopkgtest-satdep. 393s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 97650 files and directories currently installed.) 393s Preparing to unpack .../2-autopkgtest-satdep.deb ... 393s Unpacking autopkgtest-satdep (0) ... 393s Setting up autopkgtest-satdep (0) ... 396s (Reading database ... 97650 files and directories currently installed.) 396s Removing autopkgtest-satdep (0) ... 396s autopkgtest [03:30:47]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 396s autopkgtest [03:30:47]: test pkg-r-autopkgtest: [----------------------- 396s Test: Try to load the R library NetSAM 396s 396s R version 4.3.2 (2023-10-31) -- "Eye Holes" 396s Copyright (C) 2023 The R Foundation for Statistical Computing 396s Platform: x86_64-pc-linux-gnu (64-bit) 396s 396s R is free software and comes with ABSOLUTELY NO WARRANTY. 396s You are welcome to redistribute it under certain conditions. 396s Type 'license()' or 'licence()' for distribution details. 396s 396s R is a collaborative project with many contributors. 396s Type 'contributors()' for more information and 396s 'citation()' on how to cite R or R packages in publications. 396s 396s Type 'demo()' for some demos, 'help()' for on-line help, or 396s 'help.start()' for an HTML browser interface to help. 396s Type 'q()' to quit R. 396s 396s > library('NetSAM') 396s Loading required package: seriation 396s Loading required package: igraph 396s 396s Attaching package: ‘igraph’ 396s 396s The following object is masked from ‘package:seriation’: 396s 396s permute 396s 396s The following objects are masked from ‘package:stats’: 396s 396s decompose, spectrum 396s 396s The following object is masked from ‘package:base’: 396s 396s union 396s 396s Loading required package: tools 396s Loading required package: WGCNA 396s Loading required package: dynamicTreeCut 396s Loading required package: fastcluster 396s 396s Attaching package: ‘fastcluster’ 396s 396s The following object is masked from ‘package:stats’: 396s 396s hclust 396s 400s 402s 402s Attaching package: ‘WGCNA’ 402s 402s The following object is masked from ‘package:stats’: 402s 402s cor 402s 402s Loading required package: biomaRt 402s > 402s > 402s ****************************************** 402s 402s * Welcome to NetSAM ! * 402s 402s ****************************************** 402s 402s Other tests are currently unsupported! 402s They will be progressively added. 403s autopkgtest [03:30:54]: test pkg-r-autopkgtest: -----------------------] 405s autopkgtest [03:30:56]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 405s pkg-r-autopkgtest PASS 405s autopkgtest [03:30:56]: @@@@@@@@@@@@@@@@@@@@ summary 405s pkg-r-autopkgtest PASS 415s Creating nova instance adt-noble-i386-r-bioc-netsam-20240322-032411-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240321.img (UUID 6f9effbc-61d8-4d0a-a7e9-883547f42ac1)...