0s autopkgtest [03:17:24]: starting date and time: 2024-03-22 03:17:24+0000 0s autopkgtest [03:17:24]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [03:17:24]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.46au8nxb/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base --apt-upgrade r-bioc-multiassayexperiment --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-48.secgroup --name adt-noble-i386-r-bioc-multiassayexperiment-20240322-031724-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 352s autopkgtest [03:23:16]: testbed dpkg architecture: amd64 352s autopkgtest [03:23:16]: testbed apt version: 2.7.12 352s autopkgtest [03:23:16]: test architecture: i386 352s autopkgtest [03:23:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup 352s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 352s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3805 kB] 352s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 352s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 352s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 352s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [703 kB] 352s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [467 kB] 352s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 352s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 352s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 352s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 352s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1277 kB] 352s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 352s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 352s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 352s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 352s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 356s Fetched 11.3 MB in 1s (8089 kB/s) 356s Reading package lists... 357s Reading package lists... 358s Building dependency tree... 358s Reading state information... 358s Calculating upgrade... 358s The following packages will be upgraded: 358s cloud-init fonts-ubuntu-console python3-markupsafe 358s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 358s Need to get 629 kB of archives. 358s After this operation, 11.3 kB disk space will be freed. 358s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 358s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 python3-markupsafe amd64 2.1.5-1build1 [12.6 kB] 358s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 cloud-init all 24.1.2-0ubuntu1 [597 kB] 359s Preconfiguring packages ... 359s Fetched 629 kB in 0s (21.8 MB/s) 359s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 359s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 359s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 359s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_amd64.deb ... 359s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 359s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 359s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 359s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 359s Setting up cloud-init (24.1.2-0ubuntu1) ... 361s Setting up python3-markupsafe (2.1.5-1build1) ... 361s Processing triggers for man-db (2.12.0-3) ... 361s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 362s Reading package lists... 362s Building dependency tree... 362s Reading state information... 362s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 363s sh: Attempting to set up Debian/Ubuntu apt sources automatically 363s sh: Distribution appears to be Ubuntu 364s Reading package lists... 364s Building dependency tree... 364s Reading state information... 364s eatmydata is already the newest version (131-1). 364s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 364s Reading package lists... 364s Building dependency tree... 364s Reading state information... 364s dbus is already the newest version (1.14.10-4ubuntu1). 364s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 365s Reading package lists... 365s Building dependency tree... 365s Reading state information... 365s rng-tools-debian is already the newest version (2.4). 365s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 365s Reading package lists... 365s Building dependency tree... 365s Reading state information... 365s The following packages will be REMOVED: 365s cloud-init* python3-configobj* python3-debconf* 366s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 366s After this operation, 3256 kB disk space will be freed. 366s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 366s Removing cloud-init (24.1.2-0ubuntu1) ... 366s Removing python3-configobj (5.0.8-3) ... 366s Removing python3-debconf (1.5.86) ... 366s Processing triggers for man-db (2.12.0-3) ... 367s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 367s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 367s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 367s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 367s invoke-rc.d: policy-rc.d denied execution of try-restart. 367s Reading package lists... 368s Building dependency tree... 368s Reading state information... 368s linux-generic is already the newest version (6.8.0-11.11+1). 368s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 368s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 368s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 368s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 370s Reading package lists... 370s Reading package lists... 370s Building dependency tree... 370s Reading state information... 371s Calculating upgrade... 371s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 371s Reading package lists... 371s Building dependency tree... 371s Reading state information... 371s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 372s autopkgtest [03:23:36]: rebooting testbed after setup commands that affected boot 533s autopkgtest [03:26:17]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 534s autopkgtest [03:26:18]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-multiassayexperiment 535s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-multiassayexperiment 1.28.0+dfsg-1 (dsc) [2434 B] 535s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-multiassayexperiment 1.28.0+dfsg-1 (tar) [342 kB] 535s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-multiassayexperiment 1.28.0+dfsg-1 (diff) [6304 B] 535s gpgv: Signature made Thu Nov 30 13:43:07 2023 UTC 535s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 535s gpgv: issuer "tille@debian.org" 535s gpgv: Can't check signature: No public key 535s dpkg-source: warning: cannot verify inline signature for ./r-bioc-multiassayexperiment_1.28.0+dfsg-1.dsc: no acceptable signature found 535s autopkgtest [03:26:19]: testing package r-bioc-multiassayexperiment version 1.28.0+dfsg-1 539s autopkgtest [03:26:23]: build not needed 542s autopkgtest [03:26:26]: test pkg-r-autopkgtest: preparing testbed 547s Note, using file '/tmp/autopkgtest.XAHG3Y/1-autopkgtest-satdep.dsc' to get the build dependencies 547s Reading package lists... 548s Building dependency tree... 548s Reading state information... 548s Starting pkgProblemResolver with broken count: 0 548s Starting 2 pkgProblemResolver with broken count: 0 548s Done 549s The following NEW packages will be installed: 549s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 549s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 549s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 549s g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 549s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13 549s gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu hdf5-helpers 549s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 549s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libbz2-dev libc-dev-bin 549s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4-openssl-dev libdatrie1 549s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 549s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 549s libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 549s libhdf5-hl-fortran-100 libhwasan0 libice6 libicu-dev libio-string-perl 549s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 549s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 549s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 549s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 549s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 549s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 549s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 549s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnlopt0 libnsl-dev 549s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 549s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 549s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libquadmath0 549s libreadline-dev libsharpyuv0 libsm6 libsnappy1v5 libssl-dev libstdc++-13-dev 549s libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 549s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 549s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 549s libxss1 libxt6 libzzip-0-13 linux-libc-dev littler node-bootstrap-sass 549s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 549s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biobase 549s r-bioc-biocbaseutils r-bioc-biocgenerics r-bioc-biocstyle 549s r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata 549s r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges r-bioc-matrixgenerics 549s r-bioc-multiassayexperiment r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 549s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 549s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 549s r-cran-backports r-cran-base64enc r-cran-biocmanager r-cran-bit r-cran-bit64 549s r-cran-bitops r-cran-bookdown r-cran-boot r-cran-brio r-cran-broom 549s r-cran-bslib r-cran-cachem r-cran-callr r-cran-car r-cran-cardata 549s r-cran-caret r-cran-cellranger r-cran-class r-cran-cli r-cran-clipr 549s r-cran-clock r-cran-codetools r-cran-colorspace r-cran-commonmark 549s r-cran-conquer r-cran-corrplot r-cran-cowplot r-cran-cpp11 r-cran-crayon 549s r-cran-curl r-cran-data.table r-cran-desc r-cran-diagram r-cran-diffobj 549s r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-ellipsis r-cran-evaluate 549s r-cran-exactranktests r-cran-fansi r-cran-farver r-cran-fastmap 549s r-cran-fontawesome r-cran-forcats r-cran-foreach r-cran-foreign r-cran-fs 549s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggplot2 549s r-cran-ggpubr r-cran-ggrepel r-cran-ggsci r-cran-ggsignif r-cran-ggtext 549s r-cran-globals r-cran-glue r-cran-gower r-cran-gridextra r-cran-gridtext 549s r-cran-gtable r-cran-hardhat r-cran-haven r-cran-highr r-cran-hms 549s r-cran-htmltools r-cran-httpuv r-cran-ipred r-cran-isoband r-cran-iterators 549s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth r-cran-km.ci 549s r-cran-kmsurv r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 549s r-cran-lava r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lme4 549s r-cran-lubridate r-cran-magrittr r-cran-maptools r-cran-markdown r-cran-mass 549s r-cran-matrix r-cran-matrixmodels r-cran-matrixstats r-cran-maxstat 549s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-minqa r-cran-modelmetrics 549s r-cran-munsell r-cran-mvtnorm r-cran-nlme r-cran-nloptr r-cran-nnet 549s r-cran-numderiv r-cran-openxlsx r-cran-parallelly r-cran-pbkrtest 549s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 549s r-cran-pkgload r-cran-plyr r-cran-png r-cran-polynom r-cran-praise 549s r-cran-prettyunits r-cran-proc r-cran-processx r-cran-prodlim 549s r-cran-progress r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps 549s r-cran-purrr r-cran-quantreg r-cran-r.cache r-cran-r.methodss3 r-cran-r.oo 549s r-cran-r.rsp r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer 549s r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcurl r-cran-readr 549s r-cran-readxl r-cran-recipes r-cran-rematch r-cran-rematch2 r-cran-reshape2 549s r-cran-rio r-cran-rlang r-cran-rmarkdown r-cran-rpart r-cran-rprojroot 549s r-cran-rstatix r-cran-sass r-cran-scales r-cran-shape r-cran-shiny 549s r-cran-sourcetools r-cran-sp r-cran-sparsem r-cran-squarem r-cran-statmod 549s r-cran-stringi r-cran-stringr r-cran-survival r-cran-survminer 549s r-cran-survmisc r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 549s r-cran-timechange r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-upsetr 549s r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo 549s r-cran-withr r-cran-writexl r-cran-xfun r-cran-xml2 r-cran-xtable 549s r-cran-yaml r-cran-zip r-cran-zoo rpcsvc-proto t1utils tcl tcl8.6 tex-common 549s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 549s x11-common xdg-utils zip zlib1g-dev 549s 0 upgraded, 386 newly installed, 0 to remove and 0 not upgraded. 549s Need to get 476 MB of archives. 549s After this operation, 1314 MB of additional disk space will be used. 549s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 549s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 549s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 549s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 549s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 549s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 549s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 549s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 549s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 549s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 549s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 549s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 549s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 549s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 549s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 549s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 549s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 549s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 549s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 549s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 549s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 549s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 549s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 549s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 549s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 549s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 549s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 549s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 549s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 549s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 549s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 549s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 549s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 549s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 549s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 549s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 549s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 549s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 549s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 549s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 549s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 549s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 549s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 549s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 549s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 549s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 549s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 549s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 549s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 549s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 549s Get:51 http://ftpmaster.internal/ubuntu noble/universe amd64 hdf5-helpers amd64 1.10.10+repack-3ubuntu1 [15.5 kB] 549s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 549s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 javascript-common all 11+nmu1 [5936 B] 549s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 libaec0 amd64 1.1.2-1 [22.6 kB] 549s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 549s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 549s Get:57 http://ftpmaster.internal/ubuntu noble/universe amd64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 549s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 549s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 549s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libsnappy1v5 amd64 1.1.10-1 [28.4 kB] 549s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 libblosc1 amd64 1.21.5+ds-1 [36.5 kB] 549s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 549s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 549s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 549s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 549s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 549s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 549s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libcurl4-openssl-dev amd64 8.5.0-2ubuntu2 [446 kB] 549s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 549s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 549s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 549s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 549s Get:73 http://ftpmaster.internal/ubuntu noble/universe amd64 libsz2 amd64 1.1.2-1 [5416 B] 549s Get:74 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-103-1 amd64 1.10.10+repack-3ubuntu1 [1327 kB] 549s Get:75 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-cpp-103-1 amd64 1.10.10+repack-3ubuntu1 [128 kB] 549s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-fortran-102 amd64 1.10.10+repack-3ubuntu1 [86.4 kB] 549s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-hl-100 amd64 1.10.10+repack-3ubuntu1 [56.2 kB] 549s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-hl-fortran-100 amd64 1.10.10+repack-3ubuntu1 [32.5 kB] 549s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-hl-cpp-100 amd64 1.10.10+repack-3ubuntu1 [11.0 kB] 549s Get:80 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 549s Get:81 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 549s Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 549s Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 549s Get:84 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 549s Get:85 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 549s Get:86 http://ftpmaster.internal/ubuntu noble/universe amd64 libaec-dev amd64 1.1.2-1 [19.5 kB] 549s Get:87 http://ftpmaster.internal/ubuntu noble/main amd64 libssl-dev amd64 3.0.10-1ubuntu4 [2400 kB] 549s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-dev amd64 1.10.10+repack-3ubuntu1 [2826 kB] 549s Get:89 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 549s Get:90 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 549s Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 549s Get:92 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 549s Get:93 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 549s Get:94 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 549s Get:95 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 549s Get:96 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 549s Get:97 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 549s Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 549s Get:99 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 549s Get:100 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 549s Get:101 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 549s Get:102 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 550s Get:103 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 550s Get:104 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 550s Get:105 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 550s Get:106 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 550s Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 libkpathsea6 amd64 2023.20230311.66589-9 [62.9 kB] 550s Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 550s Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 550s Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 550s Get:111 http://ftpmaster.internal/ubuntu noble/main amd64 liblua5.4-0 amd64 5.4.6-3 [166 kB] 550s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 550s Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 550s Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 550s Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 550s Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 550s Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 550s Get:118 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 550s Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 550s Get:120 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 550s Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 550s Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 550s Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 550s Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 550s Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 550s Get:126 http://ftpmaster.internal/ubuntu noble/universe amd64 libpotrace0 amd64 1.16-2 [17.2 kB] 550s Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libptexenc1 amd64 2023.20230311.66589-9 [40.4 kB] 550s Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 550s Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 550s Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 550s Get:131 http://ftpmaster.internal/ubuntu noble/main amd64 libsynctex2 amd64 2023.20230311.66589-9 [59.5 kB] 550s Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 550s Get:133 http://ftpmaster.internal/ubuntu noble/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 550s Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 libtexlua53-5 amd64 2023.20230311.66589-9 [122 kB] 550s Get:135 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 550s Get:136 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 550s Get:137 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 550s Get:138 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 550s Get:139 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 550s Get:140 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] 550s Get:141 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 550s Get:142 http://ftpmaster.internal/ubuntu noble/main amd64 libxmu6 amd64 2:1.1.3-3 [49.6 kB] 550s Get:143 http://ftpmaster.internal/ubuntu noble/main amd64 libxpm4 amd64 1:3.5.17-1 [35.9 kB] 550s Get:144 http://ftpmaster.internal/ubuntu noble/main amd64 libxaw7 amd64 2:1.0.14-1 [191 kB] 550s Get:145 http://ftpmaster.internal/ubuntu noble/main amd64 libxi6 amd64 2:1.8.1-1 [32.4 kB] 550s Get:146 http://ftpmaster.internal/ubuntu noble/universe amd64 libzzip-0-13 amd64 0.13.72+dfsg.1-1.1 [27.0 kB] 550s Get:147 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 550s Get:148 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 550s Get:149 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 550s Get:150 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 550s Get:151 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 550s Get:152 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 550s Get:153 http://ftpmaster.internal/ubuntu noble/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 550s Get:154 http://ftpmaster.internal/ubuntu noble/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 550s Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 550s Get:156 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc-data all 3.1.3-1 [92.4 kB] 550s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc amd64 3.1.3+ds-2 [26.9 MB] 550s Get:158 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 550s Get:159 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 550s Get:160 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 550s Get:161 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 550s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 550s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 550s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 550s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biobase amd64 2.62.0-1 [2136 kB] 550s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocbaseutils all 1.4.0+dfsg-1 [31.3 kB] 550s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 550s Get:168 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-digest amd64 0.6.34-1 [186 kB] 550s Get:169 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 550s Get:170 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 550s Get:171 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 550s Get:172 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltools amd64 0.5.7-1 [369 kB] 550s Get:173 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-evaluate all 0.23-1 [90.2 kB] 550s Get:174 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xfun amd64 0.41+dfsg-1 [415 kB] 550s Get:175 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 550s Get:176 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-yaml amd64 2.3.8-1 [108 kB] 550s Get:177 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 550s Get:178 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 552s Get:179 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 552s Get:180 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 552s Get:181 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 552s Get:182 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 552s Get:183 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 552s Get:184 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 552s Get:185 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 552s Get:186 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mime amd64 0.12-1 [35.8 kB] 552s Get:187 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fs amd64 1.6.3+dfsg-1 [229 kB] 552s Get:188 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 552s Get:189 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 552s Get:190 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sass amd64 0.4.8+dfsg-1 [996 kB] 552s Get:191 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 552s Get:192 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 552s Get:193 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 552s Get:194 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 552s Get:195 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 552s Get:196 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 552s Get:197 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytex all 0.49-1 [141 kB] 552s Get:198 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 552s Get:199 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 552s Get:200 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 552s Get:201 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 552s Get:202 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-promises amd64 1.2.1+dfsg-1 [284 kB] 552s Get:203 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httpuv amd64 1.6.14+dfsg-1 [510 kB] 552s Get:204 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 552s Get:205 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 552s Get:206 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 552s Get:207 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 552s Get:208 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 552s Get:209 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 552s Get:210 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 552s Get:211 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 552s Get:212 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 552s Get:213 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 552s Get:214 http://ftpmaster.internal/ubuntu noble/universe amd64 tex-common all 6.18 [32.8 kB] 552s Get:215 http://ftpmaster.internal/ubuntu noble/main amd64 t1utils amd64 1.41-4build2 [61.3 kB] 552s Get:216 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-binaries amd64 2023.20230311.66589-9 [8529 kB] 552s Get:217 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-base all 2023.20240207-1 [21.7 MB] 552s Get:218 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-latex-base all 2023.20240207-1 [1238 kB] 552s Get:219 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 552s Get:220 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 552s Get:221 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lattice amd64 0.22-5-1 [1342 kB] 552s Get:222 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrix amd64 1.6-5-1 [3830 kB] 552s Get:223 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrixstats amd64 1.2.0-1 [488 kB] 552s Get:224 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 552s Get:225 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4vectors amd64 0.40.2+dfsg-1 [2056 kB] 552s Get:226 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-iranges amd64 2.36.0-1 [2252 kB] 552s Get:227 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-abind all 1.4-5-2 [63.6 kB] 552s Get:228 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4arrays amd64 1.2.0+dfsg-1 [501 kB] 552s Get:229 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 552s Get:230 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-xvector amd64 0.42.0-1 [621 kB] 552s Get:231 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-sparsearray amd64 1.2.4+dfsg-1 [1195 kB] 552s Get:232 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-delayedarray amd64 0.28.0+dfsg-1 [1787 kB] 552s Get:233 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 552s Get:234 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1 [793 kB] 552s Get:235 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 552s Get:236 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 552s Get:237 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomicranges amd64 1.54.1+dfsg-1 [1823 kB] 552s Get:238 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-rhdf5lib amd64 1.24.2+dfsg-1 [96.2 kB] 552s Get:239 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-rhdf5filters amd64 1.14.1+dfsg-3 [136 kB] 552s Get:240 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-rhdf5 amd64 2.46.1+dfsg-1 [808 kB] 552s Get:241 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-hdf5array amd64 1.30.1-1 [8759 kB] 552s Get:242 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 552s Get:243 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 552s Get:244 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 552s Get:245 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 552s Get:246 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 552s Get:247 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 552s Get:248 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 552s Get:249 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyselect amd64 1.2.0+dfsg-1 [218 kB] 552s Get:250 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 552s Get:251 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 552s Get:252 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 552s Get:253 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 552s Get:254 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-multiassayexperiment all 1.28.0+dfsg-1 [1063 kB] 552s Get:255 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-backports amd64 1.4.1-1 [101 kB] 552s Get:256 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 552s Get:257 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 552s Get:258 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-boot all 1.3-30-1 [619 kB] 552s Get:259 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-brio amd64 1.1.4-1 [37.9 kB] 552s Get:260 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 552s Get:261 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 552s Get:262 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-processx amd64 3.8.3-1 [346 kB] 552s Get:263 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-callr all 3.7.3-2 [425 kB] 552s Get:264 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cardata all 3.0.5-1 [1819 kB] 552s Get:265 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mass amd64 7.3-60.0.1-1 [1119 kB] 552s Get:266 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nlme amd64 3.1.164-1 [2260 kB] 552s Get:267 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 552s Get:268 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nnet amd64 7.3-19-2 [112 kB] 552s Get:269 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-minqa amd64 1.2.6-1 [116 kB] 552s Get:270 http://ftpmaster.internal/ubuntu noble/universe amd64 libnlopt0 amd64 2.7.1-5build2 [184 kB] 552s Get:271 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 552s Get:272 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 552s Get:273 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 552s Get:274 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgload all 1.3.4-1 [207 kB] 552s Get:275 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 552s Get:276 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 552s Get:277 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 552s Get:278 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 552s Get:279 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-testthat amd64 3.2.1-1 [1684 kB] 552s Get:280 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nloptr amd64 2.0.3-1 [381 kB] 552s Get:281 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcppeigen amd64 0.3.3.9.4-1 [1189 kB] 552s Get:282 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 552s Get:283 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lme4 amd64 1.1-35.1-4 [4138 kB] 552s Get:284 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 552s Get:285 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pbkrtest all 0.5.2-2 [182 kB] 552s Get:286 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sparsem amd64 1.81-1 [905 kB] 552s Get:287 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 552s Get:288 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-survival amd64 3.5-8-1 [6120 kB] 552s Get:289 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpparmadillo amd64 0.12.8.0.0-1 [862 kB] 552s Get:290 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 552s Get:291 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 552s Get:292 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-farver amd64 2.1.1-1 [1353 kB] 552s Get:293 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 552s Get:294 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 552s Get:295 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-munsell all 0.5.0-2build1 [208 kB] 552s Get:296 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 552s Get:297 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 552s Get:298 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 552s Get:299 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 552s Get:300 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-class amd64 7.3-22-2 [88.3 kB] 552s Get:301 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 552s Get:302 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-e1071 amd64 1.7-14-1 [558 kB] 552s Get:303 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-codetools all 0.2-19-1 [90.5 kB] 552s Get:304 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 552s Get:305 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 552s Get:306 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-data.table amd64 1.14.10+dfsg-1 [1837 kB] 552s Get:307 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 552s Get:308 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 552s Get:309 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 552s Get:310 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 552s Get:311 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-clock amd64 0.7.0-1.1 [1765 kB] 552s Get:312 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 552s Get:313 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-hardhat all 1.3.1+dfsg-1 [554 kB] 552s Get:314 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rpart amd64 4.1.23-1 [661 kB] 552s Get:315 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shape all 1.4.6-1 [770 kB] 552s Get:316 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 552s Get:317 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-kernsmooth amd64 2.23-22-1 [91.7 kB] 552s Get:318 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-globals all 0.16.2-1 [117 kB] 552s Get:319 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 552s Get:320 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-parallelly amd64 1.37.1-1 [365 kB] 552s Get:321 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-future all 1.33.1+dfsg-1 [634 kB] 552s Get:322 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-future.apply all 1.11.1+dfsg-1 [171 kB] 552s Get:323 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 552s Get:324 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 552s Get:325 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 552s Get:326 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-prodlim amd64 2023.08.28-1 [408 kB] 552s Get:327 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ipred amd64 0.9-14-1 [383 kB] 552s Get:328 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 552s Get:329 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 552s Get:330 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-timedate amd64 4032.109-1 [1229 kB] 552s Get:331 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-recipes all 1.0.9+dfsg-1 [1964 kB] 552s Get:332 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 552s Get:333 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 552s Get:334 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 552s Get:335 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-quantreg amd64 5.97-1 [1533 kB] 552s Get:336 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sp amd64 1:2.1-2+dfsg-1 [1447 kB] 552s Get:337 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-foreign amd64 0.8.86-1 [242 kB] 552s Get:338 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-maptools amd64 1:1.1-8+dfsg-1 [1365 kB] 552s Get:339 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-forcats all 1.0.0-1 [369 kB] 552s Get:340 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 552s Get:341 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-clipr all 0.8.0-1 [53.5 kB] 552s Get:342 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 552s Get:343 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 552s Get:344 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vroom amd64 1.6.5-1 [848 kB] 552s Get:345 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-readr amd64 2.1.5-1 [766 kB] 552s Get:346 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-haven amd64 2.5.4-1 [346 kB] 552s Get:347 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-curl amd64 5.2.0+dfsg-1 [188 kB] 552s Get:348 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rematch all 2.0.0-1 [18.3 kB] 552s Get:349 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cellranger all 1.1.0-3 [102 kB] 552s Get:350 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-readxl amd64 1.4.3-1 [736 kB] 552s Get:351 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-writexl amd64 1.5.0-1 [157 kB] 552s Get:352 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 552s Get:353 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 552s Get:354 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 552s Get:355 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-zip amd64 2.3.1-1 [123 kB] 552s Get:356 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-openxlsx amd64 4.2.5.2-1 [1943 kB] 552s Get:357 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rio all 1.0.1-1 [529 kB] 552s Get:358 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-car all 3.1-2-2 [1692 kB] 552s Get:359 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-corrplot all 0.92-1 [131 kB] 552s Get:360 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 552s Get:361 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-exactranktests amd64 0.8-35-1 [163 kB] 552s Get:362 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggrepel amd64 0.9.5-1 [254 kB] 552s Get:363 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggsci all 3.0.1-1 [1987 kB] 552s Get:364 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggsignif all 0.6.4-1 [398 kB] 552s Get:365 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 552s Get:366 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-polynom all 1.4-1+dfsg-1 [89.7 kB] 552s Get:367 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rstatix all 0.7.2-1 [607 kB] 552s Get:368 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggpubr all 0.6.0-1 [2042 kB] 552s Get:369 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-markdown all 1.12+dfsg-1 [179 kB] 552s Get:370 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-png amd64 0.1-8-1 [40.5 kB] 552s Get:371 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jpeg amd64 0.1-10-1 [31.4 kB] 552s Get:372 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xml2 amd64 1.3.6-1 [322 kB] 552s Get:373 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gridtext amd64 0.1.5-2 [456 kB] 552s Get:374 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggtext all 0.1.2-1 [1069 kB] 552s Get:375 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-km.ci all 0.5-6-1 [67.1 kB] 552s Get:376 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-kmsurv amd64 0.1-5-2build1 [125 kB] 552s Get:377 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mvtnorm amd64 1.2-4-1 [724 kB] 552s Get:378 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-maxstat amd64 0.7-25-2build1 [178 kB] 552s Get:379 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r.cache all 0.16.0-1 [113 kB] 552s Get:380 http://ftpmaster.internal/ubuntu noble/main amd64 tcl8.6 amd64 8.6.13+dfsg-2 [14.7 kB] 552s Get:381 http://ftpmaster.internal/ubuntu noble/main amd64 tcl amd64 8.6.13 [3992 B] 552s Get:382 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r.rsp all 0.46.0+ds-1 [1412 kB] 552s Get:383 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 552s Get:384 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-survmisc all 0.5.6-1 [334 kB] 552s Get:385 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-survminer all 0.4.9+dfsg-1 [393 kB] 552s Get:386 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-upsetr all 1.4.0+dfsg-2 [217 kB] 553s Preconfiguring packages ... 553s Fetched 476 MB in 4s (124 MB/s) 553s Selecting previously unselected package libc-dev-bin. 554s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 554s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 554s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 554s Selecting previously unselected package linux-libc-dev:amd64. 554s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 554s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 554s Selecting previously unselected package libcrypt-dev:amd64. 554s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 554s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 554s Selecting previously unselected package libtirpc-dev:amd64. 554s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 554s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 554s Selecting previously unselected package libnsl-dev:amd64. 554s Preparing to unpack .../004-libnsl-dev_1.3.0-3_amd64.deb ... 554s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 554s Selecting previously unselected package rpcsvc-proto. 554s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 554s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 554s Selecting previously unselected package libc6-dev:amd64. 554s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_amd64.deb ... 554s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 554s Selecting previously unselected package libisl23:amd64. 554s Preparing to unpack .../007-libisl23_0.26-3_amd64.deb ... 554s Unpacking libisl23:amd64 (0.26-3) ... 554s Selecting previously unselected package libmpc3:amd64. 554s Preparing to unpack .../008-libmpc3_1.3.1-1_amd64.deb ... 554s Unpacking libmpc3:amd64 (1.3.1-1) ... 554s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 554s Preparing to unpack .../009-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 554s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 554s Selecting previously unselected package cpp-13. 554s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 554s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 554s Selecting previously unselected package cpp-x86-64-linux-gnu. 554s Preparing to unpack .../011-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 554s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 554s Selecting previously unselected package cpp. 554s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 554s Unpacking cpp (4:13.2.0-7ubuntu1) ... 554s Selecting previously unselected package libcc1-0:amd64. 554s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 554s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 554s Selecting previously unselected package libgomp1:amd64. 554s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 554s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 554s Selecting previously unselected package libitm1:amd64. 554s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_amd64.deb ... 554s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 554s Selecting previously unselected package libatomic1:amd64. 554s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 554s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 554s Selecting previously unselected package libasan8:amd64. 554s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_amd64.deb ... 554s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 555s Selecting previously unselected package liblsan0:amd64. 555s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 555s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 555s Selecting previously unselected package libtsan2:amd64. 555s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 555s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 555s Selecting previously unselected package libubsan1:amd64. 555s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 555s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 555s Selecting previously unselected package libhwasan0:amd64. 555s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 555s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 555s Selecting previously unselected package libquadmath0:amd64. 555s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 555s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 555s Selecting previously unselected package libgcc-13-dev:amd64. 555s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 555s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 555s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 555s Preparing to unpack .../024-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 555s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package gcc-13. 557s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package gcc-x86-64-linux-gnu. 557s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 557s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 557s Selecting previously unselected package gcc. 557s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 557s Unpacking gcc (4:13.2.0-7ubuntu1) ... 557s Selecting previously unselected package libstdc++-13-dev:amd64. 557s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package g++-13-x86-64-linux-gnu. 557s Preparing to unpack .../029-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package g++-13. 557s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking g++-13 (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package g++-x86-64-linux-gnu. 557s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 557s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 557s Selecting previously unselected package g++. 557s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 557s Unpacking g++ (4:13.2.0-7ubuntu1) ... 557s Selecting previously unselected package build-essential. 557s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 557s Unpacking build-essential (12.10ubuntu1) ... 557s Selecting previously unselected package dctrl-tools. 557s Preparing to unpack .../034-dctrl-tools_2.24-3build2_amd64.deb ... 557s Unpacking dctrl-tools (2.24-3build2) ... 557s Selecting previously unselected package fonts-dejavu-mono. 557s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 557s Unpacking fonts-dejavu-mono (2.37-8) ... 557s Selecting previously unselected package fonts-dejavu-core. 557s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 557s Unpacking fonts-dejavu-core (2.37-8) ... 557s Selecting previously unselected package fontconfig-config. 557s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 557s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 557s Selecting previously unselected package libfontconfig1:amd64. 557s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 557s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 557s Selecting previously unselected package fontconfig. 557s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 557s Unpacking fontconfig (2.15.0-1ubuntu1) ... 557s Selecting previously unselected package fonts-font-awesome. 557s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 557s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 557s Selecting previously unselected package fonts-glyphicons-halflings. 557s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 557s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 557s Selecting previously unselected package fonts-lmodern. 557s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 557s Unpacking fonts-lmodern (2.005-1) ... 557s Selecting previously unselected package fonts-mathjax. 557s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 557s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 557s Selecting previously unselected package libgfortran5:amd64. 557s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 557s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 557s Selecting previously unselected package libgfortran-13-dev:amd64. 557s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 557s Preparing to unpack .../046-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package gfortran-13. 557s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 557s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 557s Selecting previously unselected package gfortran-x86-64-linux-gnu. 557s Preparing to unpack .../048-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 557s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 557s Selecting previously unselected package gfortran. 557s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 557s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 557s Selecting previously unselected package hdf5-helpers. 557s Preparing to unpack .../050-hdf5-helpers_1.10.10+repack-3ubuntu1_amd64.deb ... 557s Unpacking hdf5-helpers (1.10.10+repack-3ubuntu1) ... 557s Selecting previously unselected package icu-devtools. 557s Preparing to unpack .../051-icu-devtools_74.2-1ubuntu1_amd64.deb ... 557s Unpacking icu-devtools (74.2-1ubuntu1) ... 557s Selecting previously unselected package javascript-common. 557s Preparing to unpack .../052-javascript-common_11+nmu1_all.deb ... 557s Unpacking javascript-common (11+nmu1) ... 557s Selecting previously unselected package libaec0:amd64. 557s Preparing to unpack .../053-libaec0_1.1.2-1_amd64.deb ... 557s Unpacking libaec0:amd64 (1.1.2-1) ... 557s Selecting previously unselected package libio-string-perl. 557s Preparing to unpack .../054-libio-string-perl_1.08-4_all.deb ... 557s Unpacking libio-string-perl (1.08-4) ... 557s Selecting previously unselected package liblatex-tounicode-perl. 557s Preparing to unpack .../055-liblatex-tounicode-perl_0.54-2_all.deb ... 557s Unpacking liblatex-tounicode-perl (0.54-2) ... 557s Selecting previously unselected package libbibtex-parser-perl. 557s Preparing to unpack .../056-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 557s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 557s Selecting previously unselected package libblas3:amd64. 557s Preparing to unpack .../057-libblas3_3.12.0-3_amd64.deb ... 557s Unpacking libblas3:amd64 (3.12.0-3) ... 557s Selecting previously unselected package libblas-dev:amd64. 557s Preparing to unpack .../058-libblas-dev_3.12.0-3_amd64.deb ... 557s Unpacking libblas-dev:amd64 (3.12.0-3) ... 557s Selecting previously unselected package libsnappy1v5:amd64. 557s Preparing to unpack .../059-libsnappy1v5_1.1.10-1_amd64.deb ... 557s Unpacking libsnappy1v5:amd64 (1.1.10-1) ... 557s Selecting previously unselected package libblosc1:amd64. 557s Preparing to unpack .../060-libblosc1_1.21.5+ds-1_amd64.deb ... 557s Unpacking libblosc1:amd64 (1.21.5+ds-1) ... 557s Selecting previously unselected package libbz2-dev:amd64. 557s Preparing to unpack .../061-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 557s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 557s Selecting previously unselected package libpixman-1-0:amd64. 557s Preparing to unpack .../062-libpixman-1-0_0.42.2-1_amd64.deb ... 557s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 557s Selecting previously unselected package libxcb-render0:amd64. 557s Preparing to unpack .../063-libxcb-render0_1.15-1_amd64.deb ... 557s Unpacking libxcb-render0:amd64 (1.15-1) ... 557s Selecting previously unselected package libxcb-shm0:amd64. 557s Preparing to unpack .../064-libxcb-shm0_1.15-1_amd64.deb ... 557s Unpacking libxcb-shm0:amd64 (1.15-1) ... 557s Selecting previously unselected package libxrender1:amd64. 557s Preparing to unpack .../065-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 557s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 557s Selecting previously unselected package libcairo2:amd64. 557s Preparing to unpack .../066-libcairo2_1.18.0-1_amd64.deb ... 557s Unpacking libcairo2:amd64 (1.18.0-1) ... 557s Selecting previously unselected package libcurl4-openssl-dev:amd64. 557s Preparing to unpack .../067-libcurl4-openssl-dev_8.5.0-2ubuntu2_amd64.deb ... 557s Unpacking libcurl4-openssl-dev:amd64 (8.5.0-2ubuntu2) ... 557s Selecting previously unselected package libdatrie1:amd64. 557s Preparing to unpack .../068-libdatrie1_0.2.13-3_amd64.deb ... 557s Unpacking libdatrie1:amd64 (0.2.13-3) ... 558s Selecting previously unselected package libdeflate0:amd64. 558s Preparing to unpack .../069-libdeflate0_1.19-1_amd64.deb ... 558s Unpacking libdeflate0:amd64 (1.19-1) ... 558s Selecting previously unselected package libgraphite2-3:amd64. 558s Preparing to unpack .../070-libgraphite2-3_1.3.14-2_amd64.deb ... 558s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 558s Selecting previously unselected package libharfbuzz0b:amd64. 558s Preparing to unpack .../071-libharfbuzz0b_8.3.0-2_amd64.deb ... 558s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 558s Selecting previously unselected package libsz2:amd64. 558s Preparing to unpack .../072-libsz2_1.1.2-1_amd64.deb ... 558s Unpacking libsz2:amd64 (1.1.2-1) ... 558s Selecting previously unselected package libhdf5-103-1:amd64. 558s Preparing to unpack .../073-libhdf5-103-1_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package libhdf5-cpp-103-1:amd64. 558s Preparing to unpack .../074-libhdf5-cpp-103-1_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-cpp-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package libhdf5-fortran-102:amd64. 558s Preparing to unpack .../075-libhdf5-fortran-102_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-fortran-102:amd64 (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package libhdf5-hl-100:amd64. 558s Preparing to unpack .../076-libhdf5-hl-100_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-hl-100:amd64 (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package libhdf5-hl-fortran-100:amd64. 558s Preparing to unpack .../077-libhdf5-hl-fortran-100_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-hl-fortran-100:amd64 (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package libhdf5-hl-cpp-100:amd64. 558s Preparing to unpack .../078-libhdf5-hl-cpp-100_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-hl-cpp-100:amd64 (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package zlib1g-dev:amd64. 558s Preparing to unpack .../079-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ... 558s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 558s Selecting previously unselected package libjpeg-turbo8:amd64. 558s Preparing to unpack .../080-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 558s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 558s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 558s Preparing to unpack .../081-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ... 558s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 558s Selecting previously unselected package libjpeg8:amd64. 558s Preparing to unpack .../082-libjpeg8_8c-2ubuntu11_amd64.deb ... 558s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 558s Selecting previously unselected package libjpeg8-dev:amd64. 558s Preparing to unpack .../083-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 558s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 558s Selecting previously unselected package libjpeg-dev:amd64. 558s Preparing to unpack .../084-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 558s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 558s Selecting previously unselected package libaec-dev:amd64. 558s Preparing to unpack .../085-libaec-dev_1.1.2-1_amd64.deb ... 558s Unpacking libaec-dev:amd64 (1.1.2-1) ... 558s Selecting previously unselected package libssl-dev:amd64. 558s Preparing to unpack .../086-libssl-dev_3.0.10-1ubuntu4_amd64.deb ... 558s Unpacking libssl-dev:amd64 (3.0.10-1ubuntu4) ... 558s Selecting previously unselected package libhdf5-dev. 558s Preparing to unpack .../087-libhdf5-dev_1.10.10+repack-3ubuntu1_amd64.deb ... 558s Unpacking libhdf5-dev (1.10.10+repack-3ubuntu1) ... 558s Selecting previously unselected package x11-common. 558s Preparing to unpack .../088-x11-common_1%3a7.7+23ubuntu2_all.deb ... 558s Unpacking x11-common (1:7.7+23ubuntu2) ... 558s Selecting previously unselected package libice6:amd64. 558s Preparing to unpack .../089-libice6_2%3a1.0.10-1build2_amd64.deb ... 558s Unpacking libice6:amd64 (2:1.0.10-1build2) ... 558s Selecting previously unselected package libicu-dev:amd64. 558s Preparing to unpack .../090-libicu-dev_74.2-1ubuntu1_amd64.deb ... 558s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ... 558s Selecting previously unselected package libjs-bootstrap. 558s Preparing to unpack .../091-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 558s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 559s Selecting previously unselected package libjs-popper.js. 559s Preparing to unpack .../092-libjs-popper.js_1.16.1+ds-6_all.deb ... 559s Unpacking libjs-popper.js (1.16.1+ds-6) ... 559s Selecting previously unselected package libjs-bootstrap4. 559s Preparing to unpack .../093-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 559s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 559s Selecting previously unselected package libjs-d3. 559s Preparing to unpack .../094-libjs-d3_3.5.17-4_all.deb ... 559s Unpacking libjs-d3 (3.5.17-4) ... 559s Selecting previously unselected package libjs-es5-shim. 559s Preparing to unpack .../095-libjs-es5-shim_4.6.7-2_all.deb ... 559s Unpacking libjs-es5-shim (4.6.7-2) ... 559s Selecting previously unselected package libjs-highlight.js. 559s Preparing to unpack .../096-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 559s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 559s Selecting previously unselected package libjs-jquery. 559s Preparing to unpack .../097-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 559s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 559s Selecting previously unselected package libjs-jquery-datatables. 559s Preparing to unpack .../098-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 559s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 559s Selecting previously unselected package libjs-sifter.js. 559s Preparing to unpack .../099-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 559s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 559s Selecting previously unselected package libjs-microplugin.js. 559s Preparing to unpack .../100-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 559s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 559s Selecting previously unselected package libjs-jquery-selectize.js. 559s Preparing to unpack .../101-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 559s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 559s Selecting previously unselected package libjs-jquery-ui. 559s Preparing to unpack .../102-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 559s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 559s Selecting previously unselected package libjs-json. 559s Preparing to unpack .../103-libjs-json_0~20221030+~1.0.8-1_all.deb ... 559s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 559s Selecting previously unselected package libjs-lunr. 559s Preparing to unpack .../104-libjs-lunr_2.3.9~dfsg-2_all.deb ... 559s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 559s Selecting previously unselected package libjs-prettify. 559s Preparing to unpack .../105-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 559s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 559s Selecting previously unselected package libkpathsea6:amd64. 559s Preparing to unpack .../106-libkpathsea6_2023.20230311.66589-9_amd64.deb ... 559s Unpacking libkpathsea6:amd64 (2023.20230311.66589-9) ... 559s Selecting previously unselected package liblapack3:amd64. 559s Preparing to unpack .../107-liblapack3_3.12.0-3_amd64.deb ... 559s Unpacking liblapack3:amd64 (3.12.0-3) ... 559s Selecting previously unselected package liblapack-dev:amd64. 559s Preparing to unpack .../108-liblapack-dev_3.12.0-3_amd64.deb ... 559s Unpacking liblapack-dev:amd64 (3.12.0-3) ... 559s Selecting previously unselected package liblerc4:amd64. 559s Preparing to unpack .../109-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 559s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 559s Selecting previously unselected package liblua5.4-0:amd64. 559s Preparing to unpack .../110-liblua5.4-0_5.4.6-3_amd64.deb ... 559s Unpacking liblua5.4-0:amd64 (5.4.6-3) ... 559s Selecting previously unselected package libncurses-dev:amd64. 559s Preparing to unpack .../111-libncurses-dev_6.4+20240113-1ubuntu1_amd64.deb ... 559s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 559s Selecting previously unselected package libthai-data. 559s Preparing to unpack .../112-libthai-data_0.1.29-2_all.deb ... 559s Unpacking libthai-data (0.1.29-2) ... 559s Selecting previously unselected package libthai0:amd64. 559s Preparing to unpack .../113-libthai0_0.1.29-2_amd64.deb ... 559s Unpacking libthai0:amd64 (0.1.29-2) ... 559s Selecting previously unselected package libpango-1.0-0:amd64. 559s Preparing to unpack .../114-libpango-1.0-0_1.51.0+ds-4_amd64.deb ... 559s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ... 560s Selecting previously unselected package libpangoft2-1.0-0:amd64. 560s Preparing to unpack .../115-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ... 560s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 560s Selecting previously unselected package libpangocairo-1.0-0:amd64. 560s Preparing to unpack .../116-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ... 560s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 560s Selecting previously unselected package libpaper1:amd64. 560s Preparing to unpack .../117-libpaper1_1.1.29_amd64.deb ... 560s Unpacking libpaper1:amd64 (1.1.29) ... 560s Selecting previously unselected package libpaper-utils. 560s Preparing to unpack .../118-libpaper-utils_1.1.29_amd64.deb ... 560s Unpacking libpaper-utils (1.1.29) ... 560s Selecting previously unselected package libpcre2-16-0:amd64. 560s Preparing to unpack .../119-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ... 560s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 560s Selecting previously unselected package libpcre2-32-0:amd64. 560s Preparing to unpack .../120-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ... 560s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 560s Selecting previously unselected package libpcre2-posix3:amd64. 560s Preparing to unpack .../121-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ... 560s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 560s Selecting previously unselected package libpcre2-dev:amd64. 560s Preparing to unpack .../122-libpcre2-dev_10.42-4ubuntu1_amd64.deb ... 560s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ... 560s Selecting previously unselected package libpkgconf3:amd64. 560s Preparing to unpack .../123-libpkgconf3_1.8.1-2_amd64.deb ... 560s Unpacking libpkgconf3:amd64 (1.8.1-2) ... 560s Selecting previously unselected package libpng-dev:amd64. 560s Preparing to unpack .../124-libpng-dev_1.6.43-1_amd64.deb ... 560s Unpacking libpng-dev:amd64 (1.6.43-1) ... 560s Selecting previously unselected package libpotrace0:amd64. 560s Preparing to unpack .../125-libpotrace0_1.16-2_amd64.deb ... 560s Unpacking libpotrace0:amd64 (1.16-2) ... 560s Selecting previously unselected package libptexenc1:amd64. 560s Preparing to unpack .../126-libptexenc1_2023.20230311.66589-9_amd64.deb ... 560s Unpacking libptexenc1:amd64 (2023.20230311.66589-9) ... 560s Selecting previously unselected package libreadline-dev:amd64. 560s Preparing to unpack .../127-libreadline-dev_8.2-3_amd64.deb ... 560s Unpacking libreadline-dev:amd64 (8.2-3) ... 560s Selecting previously unselected package libsharpyuv0:amd64. 560s Preparing to unpack .../128-libsharpyuv0_1.3.2-0.4_amd64.deb ... 560s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ... 560s Selecting previously unselected package libsm6:amd64. 560s Preparing to unpack .../129-libsm6_2%3a1.2.3-1build2_amd64.deb ... 560s Unpacking libsm6:amd64 (2:1.2.3-1build2) ... 560s Selecting previously unselected package libsynctex2:amd64. 560s Preparing to unpack .../130-libsynctex2_2023.20230311.66589-9_amd64.deb ... 560s Unpacking libsynctex2:amd64 (2023.20230311.66589-9) ... 560s Selecting previously unselected package libtcl8.6:amd64. 560s Preparing to unpack .../131-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... 560s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... 560s Selecting previously unselected package libteckit0:amd64. 560s Preparing to unpack .../132-libteckit0_2.5.12+ds1-1_amd64.deb ... 560s Unpacking libteckit0:amd64 (2.5.12+ds1-1) ... 560s Selecting previously unselected package libtexlua53-5:amd64. 560s Preparing to unpack .../133-libtexlua53-5_2023.20230311.66589-9_amd64.deb ... 560s Unpacking libtexlua53-5:amd64 (2023.20230311.66589-9) ... 560s Selecting previously unselected package libjbig0:amd64. 560s Preparing to unpack .../134-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 560s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 560s Selecting previously unselected package libwebp7:amd64. 560s Preparing to unpack .../135-libwebp7_1.3.2-0.4_amd64.deb ... 560s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 560s Selecting previously unselected package libtiff6:amd64. 560s Preparing to unpack .../136-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 560s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 560s Selecting previously unselected package libxft2:amd64. 560s Preparing to unpack .../137-libxft2_2.3.6-1_amd64.deb ... 560s Unpacking libxft2:amd64 (2.3.6-1) ... 560s Selecting previously unselected package libxss1:amd64. 560s Preparing to unpack .../138-libxss1_1%3a1.2.3-1build2_amd64.deb ... 560s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 560s Selecting previously unselected package libtk8.6:amd64. 560s Preparing to unpack .../139-libtk8.6_8.6.13-2_amd64.deb ... 560s Unpacking libtk8.6:amd64 (8.6.13-2) ... 560s Selecting previously unselected package libxt6:amd64. 560s Preparing to unpack .../140-libxt6_1%3a1.2.1-1.1_amd64.deb ... 560s Unpacking libxt6:amd64 (1:1.2.1-1.1) ... 560s Selecting previously unselected package libxmu6:amd64. 560s Preparing to unpack .../141-libxmu6_2%3a1.1.3-3_amd64.deb ... 560s Unpacking libxmu6:amd64 (2:1.1.3-3) ... 560s Selecting previously unselected package libxpm4:amd64. 560s Preparing to unpack .../142-libxpm4_1%3a3.5.17-1_amd64.deb ... 560s Unpacking libxpm4:amd64 (1:3.5.17-1) ... 560s Selecting previously unselected package libxaw7:amd64. 560s Preparing to unpack .../143-libxaw7_2%3a1.0.14-1_amd64.deb ... 560s Unpacking libxaw7:amd64 (2:1.0.14-1) ... 560s Selecting previously unselected package libxi6:amd64. 560s Preparing to unpack .../144-libxi6_2%3a1.8.1-1_amd64.deb ... 560s Unpacking libxi6:amd64 (2:1.8.1-1) ... 560s Selecting previously unselected package libzzip-0-13:amd64. 560s Preparing to unpack .../145-libzzip-0-13_0.13.72+dfsg.1-1.1_amd64.deb ... 560s Unpacking libzzip-0-13:amd64 (0.13.72+dfsg.1-1.1) ... 560s Selecting previously unselected package zip. 560s Preparing to unpack .../146-zip_3.0-13_amd64.deb ... 560s Unpacking zip (3.0-13) ... 560s Selecting previously unselected package unzip. 560s Preparing to unpack .../147-unzip_6.0-28ubuntu3_amd64.deb ... 560s Unpacking unzip (6.0-28ubuntu3) ... 560s Selecting previously unselected package xdg-utils. 561s Preparing to unpack .../148-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 561s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 561s Selecting previously unselected package r-base-core. 561s Preparing to unpack .../149-r-base-core_4.3.2-1build1_amd64.deb ... 561s Unpacking r-base-core (4.3.2-1build1) ... 561s Selecting previously unselected package r-cran-littler. 561s Preparing to unpack .../150-r-cran-littler_0.3.19-1_amd64.deb ... 561s Unpacking r-cran-littler (0.3.19-1) ... 561s Selecting previously unselected package littler. 561s Preparing to unpack .../151-littler_0.3.19-1_all.deb ... 561s Unpacking littler (0.3.19-1) ... 561s Selecting previously unselected package node-bootstrap-sass. 561s Preparing to unpack .../152-node-bootstrap-sass_3.4.3-2_all.deb ... 561s Unpacking node-bootstrap-sass (3.4.3-2) ... 561s Selecting previously unselected package node-html5shiv. 561s Preparing to unpack .../153-node-html5shiv_3.7.3+dfsg-5_all.deb ... 561s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 561s Selecting previously unselected package node-normalize.css. 561s Preparing to unpack .../154-node-normalize.css_8.0.1-5_all.deb ... 561s Unpacking node-normalize.css (8.0.1-5) ... 561s Selecting previously unselected package pandoc-data. 561s Preparing to unpack .../155-pandoc-data_3.1.3-1_all.deb ... 561s Unpacking pandoc-data (3.1.3-1) ... 561s Selecting previously unselected package pandoc. 561s Preparing to unpack .../156-pandoc_3.1.3+ds-2_amd64.deb ... 561s Unpacking pandoc (3.1.3+ds-2) ... 562s Selecting previously unselected package pkgconf-bin. 562s Preparing to unpack .../157-pkgconf-bin_1.8.1-2_amd64.deb ... 562s Unpacking pkgconf-bin (1.8.1-2) ... 562s Selecting previously unselected package pkgconf:amd64. 562s Preparing to unpack .../158-pkgconf_1.8.1-2_amd64.deb ... 562s Unpacking pkgconf:amd64 (1.8.1-2) ... 562s Selecting previously unselected package pkg-config:amd64. 562s Preparing to unpack .../159-pkg-config_1.8.1-2_amd64.deb ... 562s Unpacking pkg-config:amd64 (1.8.1-2) ... 562s Selecting previously unselected package liblzma-dev:amd64. 562s Preparing to unpack .../160-liblzma-dev_5.4.5-0.3_amd64.deb ... 562s Unpacking liblzma-dev:amd64 (5.4.5-0.3) ... 562s Selecting previously unselected package r-base-dev. 562s Preparing to unpack .../161-r-base-dev_4.3.2-1build1_all.deb ... 562s Unpacking r-base-dev (4.3.2-1build1) ... 562s Selecting previously unselected package pkg-r-autopkgtest. 562s Preparing to unpack .../162-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 562s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 562s Selecting previously unselected package r-bioc-biocgenerics. 562s Preparing to unpack .../163-r-bioc-biocgenerics_0.48.1-2_all.deb ... 562s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 562s Selecting previously unselected package r-bioc-biobase. 562s Preparing to unpack .../164-r-bioc-biobase_2.62.0-1_amd64.deb ... 562s Unpacking r-bioc-biobase (2.62.0-1) ... 562s Selecting previously unselected package r-bioc-biocbaseutils. 562s Preparing to unpack .../165-r-bioc-biocbaseutils_1.4.0+dfsg-1_all.deb ... 562s Unpacking r-bioc-biocbaseutils (1.4.0+dfsg-1) ... 562s Selecting previously unselected package r-cran-base64enc. 562s Preparing to unpack .../166-r-cran-base64enc_0.1-3-3_amd64.deb ... 562s Unpacking r-cran-base64enc (0.1-3-3) ... 562s Selecting previously unselected package r-cran-digest. 562s Preparing to unpack .../167-r-cran-digest_0.6.34-1_amd64.deb ... 562s Unpacking r-cran-digest (0.6.34-1) ... 562s Selecting previously unselected package r-cran-rlang. 562s Preparing to unpack .../168-r-cran-rlang_1.1.3-1_amd64.deb ... 562s Unpacking r-cran-rlang (1.1.3-1) ... 562s Selecting previously unselected package r-cran-ellipsis. 562s Preparing to unpack .../169-r-cran-ellipsis_0.3.2-2_amd64.deb ... 562s Unpacking r-cran-ellipsis (0.3.2-2) ... 562s Selecting previously unselected package r-cran-fastmap. 562s Preparing to unpack .../170-r-cran-fastmap_1.1.1-1_amd64.deb ... 562s Unpacking r-cran-fastmap (1.1.1-1) ... 562s Selecting previously unselected package r-cran-htmltools. 562s Preparing to unpack .../171-r-cran-htmltools_0.5.7-1_amd64.deb ... 562s Unpacking r-cran-htmltools (0.5.7-1) ... 562s Selecting previously unselected package r-cran-evaluate. 562s Preparing to unpack .../172-r-cran-evaluate_0.23-1_all.deb ... 562s Unpacking r-cran-evaluate (0.23-1) ... 562s Selecting previously unselected package r-cran-xfun. 562s Preparing to unpack .../173-r-cran-xfun_0.41+dfsg-1_amd64.deb ... 562s Unpacking r-cran-xfun (0.41+dfsg-1) ... 562s Selecting previously unselected package r-cran-highr. 562s Preparing to unpack .../174-r-cran-highr_0.10+dfsg-1_all.deb ... 562s Unpacking r-cran-highr (0.10+dfsg-1) ... 562s Selecting previously unselected package r-cran-yaml. 562s Preparing to unpack .../175-r-cran-yaml_2.3.8-1_amd64.deb ... 562s Unpacking r-cran-yaml (2.3.8-1) ... 563s Selecting previously unselected package libjs-mathjax. 563s Preparing to unpack .../176-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 563s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 563s Selecting previously unselected package r-cran-knitr. 563s Preparing to unpack .../177-r-cran-knitr_1.45+dfsg-1_all.deb ... 563s Unpacking r-cran-knitr (1.45+dfsg-1) ... 563s Selecting previously unselected package r-cran-cachem. 563s Preparing to unpack .../178-r-cran-cachem_1.0.8-1_amd64.deb ... 563s Unpacking r-cran-cachem (1.0.8-1) ... 563s Selecting previously unselected package r-cran-jquerylib. 563s Preparing to unpack .../179-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 563s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 563s Selecting previously unselected package r-cran-jsonlite. 563s Preparing to unpack .../180-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 563s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 563s Selecting previously unselected package r-cran-cli. 563s Preparing to unpack .../181-r-cran-cli_3.6.2-1_amd64.deb ... 563s Unpacking r-cran-cli (3.6.2-1) ... 564s Selecting previously unselected package r-cran-glue. 564s Preparing to unpack .../182-r-cran-glue_1.7.0-1_amd64.deb ... 564s Unpacking r-cran-glue (1.7.0-1) ... 564s Selecting previously unselected package r-cran-lifecycle. 564s Preparing to unpack .../183-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 564s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 564s Selecting previously unselected package r-cran-memoise. 564s Preparing to unpack .../184-r-cran-memoise_2.0.1-1_all.deb ... 564s Unpacking r-cran-memoise (2.0.1-1) ... 564s Selecting previously unselected package r-cran-mime. 564s Preparing to unpack .../185-r-cran-mime_0.12-1_amd64.deb ... 564s Unpacking r-cran-mime (0.12-1) ... 564s Selecting previously unselected package r-cran-fs. 564s Preparing to unpack .../186-r-cran-fs_1.6.3+dfsg-1_amd64.deb ... 564s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 564s Selecting previously unselected package r-cran-r6. 564s Preparing to unpack .../187-r-cran-r6_2.5.1-1_all.deb ... 564s Unpacking r-cran-r6 (2.5.1-1) ... 564s Selecting previously unselected package r-cran-rappdirs. 564s Preparing to unpack .../188-r-cran-rappdirs_0.3.3-1_amd64.deb ... 564s Unpacking r-cran-rappdirs (0.3.3-1) ... 564s Selecting previously unselected package r-cran-sass. 564s Preparing to unpack .../189-r-cran-sass_0.4.8+dfsg-1_amd64.deb ... 564s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 564s Selecting previously unselected package r-cran-bslib. 564s Preparing to unpack .../190-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 564s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 564s Selecting previously unselected package r-cran-fontawesome. 564s Preparing to unpack .../191-r-cran-fontawesome_0.5.2-1_all.deb ... 564s Unpacking r-cran-fontawesome (0.5.2-1) ... 564s Selecting previously unselected package r-cran-magrittr. 564s Preparing to unpack .../192-r-cran-magrittr_2.0.3-1_amd64.deb ... 564s Unpacking r-cran-magrittr (2.0.3-1) ... 564s Selecting previously unselected package r-cran-stringi. 564s Preparing to unpack .../193-r-cran-stringi_1.8.3-1_amd64.deb ... 564s Unpacking r-cran-stringi (1.8.3-1) ... 564s Selecting previously unselected package r-cran-vctrs. 564s Preparing to unpack .../194-r-cran-vctrs_0.6.5-1_amd64.deb ... 564s Unpacking r-cran-vctrs (0.6.5-1) ... 564s Selecting previously unselected package r-cran-stringr. 564s Preparing to unpack .../195-r-cran-stringr_1.5.1-1_all.deb ... 564s Unpacking r-cran-stringr (1.5.1-1) ... 564s Selecting previously unselected package r-cran-tinytex. 564s Preparing to unpack .../196-r-cran-tinytex_0.49-1_all.deb ... 564s Unpacking r-cran-tinytex (0.49-1) ... 564s Selecting previously unselected package libjs-modernizr. 564s Preparing to unpack .../197-libjs-modernizr_2.6.2+ds1-5_all.deb ... 564s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 564s Selecting previously unselected package r-cran-pkgkitten. 564s Preparing to unpack .../198-r-cran-pkgkitten_0.2.3-1_all.deb ... 564s Unpacking r-cran-pkgkitten (0.2.3-1) ... 564s Selecting previously unselected package r-cran-rcpp. 564s Preparing to unpack .../199-r-cran-rcpp_1.0.12-1_amd64.deb ... 564s Unpacking r-cran-rcpp (1.0.12-1) ... 564s Selecting previously unselected package r-cran-later. 564s Preparing to unpack .../200-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 564s Unpacking r-cran-later (1.3.2+dfsg-1) ... 564s Selecting previously unselected package r-cran-promises. 564s Preparing to unpack .../201-r-cran-promises_1.2.1+dfsg-1_amd64.deb ... 564s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 565s Selecting previously unselected package r-cran-httpuv. 565s Preparing to unpack .../202-r-cran-httpuv_1.6.14+dfsg-1_amd64.deb ... 565s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 565s Selecting previously unselected package r-cran-xtable. 565s Preparing to unpack .../203-r-cran-xtable_1%3a1.8-4-2_all.deb ... 565s Unpacking r-cran-xtable (1:1.8-4-2) ... 565s Selecting previously unselected package r-cran-sourcetools. 565s Preparing to unpack .../204-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 565s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 565s Selecting previously unselected package r-cran-crayon. 565s Preparing to unpack .../205-r-cran-crayon_1.5.2-1_all.deb ... 565s Unpacking r-cran-crayon (1.5.2-1) ... 565s Selecting previously unselected package r-cran-withr. 565s Preparing to unpack .../206-r-cran-withr_2.5.0-1_all.deb ... 565s Unpacking r-cran-withr (2.5.0-1) ... 565s Selecting previously unselected package r-cran-commonmark. 565s Preparing to unpack .../207-r-cran-commonmark_1.9.1-1_amd64.deb ... 565s Unpacking r-cran-commonmark (1.9.1-1) ... 565s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 565s Preparing to unpack .../208-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 565s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 565s Selecting previously unselected package r-cran-shiny. 565s Preparing to unpack .../209-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 565s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 565s Selecting previously unselected package r-cran-rmarkdown. 565s Preparing to unpack .../210-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 565s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 565s Selecting previously unselected package r-cran-bookdown. 565s Preparing to unpack .../211-r-cran-bookdown_0.37+dfsg-1_all.deb ... 565s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 565s Selecting previously unselected package r-cran-biocmanager. 565s Preparing to unpack .../212-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 565s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 565s Selecting previously unselected package tex-common. 565s Preparing to unpack .../213-tex-common_6.18_all.deb ... 565s Unpacking tex-common (6.18) ... 565s Selecting previously unselected package t1utils. 565s Preparing to unpack .../214-t1utils_1.41-4build2_amd64.deb ... 565s Unpacking t1utils (1.41-4build2) ... 565s Selecting previously unselected package texlive-binaries. 565s Preparing to unpack .../215-texlive-binaries_2023.20230311.66589-9_amd64.deb ... 565s Unpacking texlive-binaries (2023.20230311.66589-9) ... 565s Selecting previously unselected package texlive-base. 565s Preparing to unpack .../216-texlive-base_2023.20240207-1_all.deb ... 565s Unpacking texlive-base (2023.20240207-1) ... 567s Selecting previously unselected package texlive-latex-base. 567s Preparing to unpack .../217-texlive-latex-base_2023.20240207-1_all.deb ... 567s Unpacking texlive-latex-base (2023.20240207-1) ... 567s Selecting previously unselected package texlive-bibtex-extra. 567s Preparing to unpack .../218-texlive-bibtex-extra_2023.20240207-1_all.deb ... 567s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 570s Selecting previously unselected package r-bioc-biocstyle. 570s Preparing to unpack .../219-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 570s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 570s Selecting previously unselected package r-cran-lattice. 570s Preparing to unpack .../220-r-cran-lattice_0.22-5-1_amd64.deb ... 570s Unpacking r-cran-lattice (0.22-5-1) ... 570s Selecting previously unselected package r-cran-matrix. 570s Preparing to unpack .../221-r-cran-matrix_1.6-5-1_amd64.deb ... 570s Unpacking r-cran-matrix (1.6-5-1) ... 570s Selecting previously unselected package r-cran-matrixstats. 570s Preparing to unpack .../222-r-cran-matrixstats_1.2.0-1_amd64.deb ... 570s Unpacking r-cran-matrixstats (1.2.0-1) ... 571s Selecting previously unselected package r-bioc-matrixgenerics. 571s Preparing to unpack .../223-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 571s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 571s Selecting previously unselected package r-bioc-s4vectors. 571s Preparing to unpack .../224-r-bioc-s4vectors_0.40.2+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 571s Selecting previously unselected package r-bioc-iranges. 571s Preparing to unpack .../225-r-bioc-iranges_2.36.0-1_amd64.deb ... 571s Unpacking r-bioc-iranges (2.36.0-1) ... 571s Selecting previously unselected package r-cran-abind. 571s Preparing to unpack .../226-r-cran-abind_1.4-5-2_all.deb ... 571s Unpacking r-cran-abind (1.4-5-2) ... 571s Selecting previously unselected package r-bioc-s4arrays. 571s Preparing to unpack .../227-r-bioc-s4arrays_1.2.0+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 571s Selecting previously unselected package r-bioc-zlibbioc. 571s Preparing to unpack .../228-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 571s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 571s Selecting previously unselected package r-bioc-xvector. 571s Preparing to unpack .../229-r-bioc-xvector_0.42.0-1_amd64.deb ... 571s Unpacking r-bioc-xvector (0.42.0-1) ... 571s Selecting previously unselected package r-bioc-sparsearray. 571s Preparing to unpack .../230-r-bioc-sparsearray_1.2.4+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 571s Selecting previously unselected package r-bioc-delayedarray. 571s Preparing to unpack .../231-r-bioc-delayedarray_0.28.0+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 571s Selecting previously unselected package r-cran-bitops. 571s Preparing to unpack .../232-r-cran-bitops_1.0-7-1_amd64.deb ... 571s Unpacking r-cran-bitops (1.0-7-1) ... 571s Selecting previously unselected package r-cran-rcurl. 571s Preparing to unpack .../233-r-cran-rcurl_1.98-1.14+dfsg-1_amd64.deb ... 571s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 571s Selecting previously unselected package r-bioc-genomeinfodbdata. 571s Preparing to unpack .../234-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 571s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 571s Selecting previously unselected package r-bioc-genomeinfodb. 571s Preparing to unpack .../235-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 571s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 571s Selecting previously unselected package r-bioc-genomicranges. 571s Preparing to unpack .../236-r-bioc-genomicranges_1.54.1+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 571s Selecting previously unselected package r-bioc-rhdf5lib. 571s Preparing to unpack .../237-r-bioc-rhdf5lib_1.24.2+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 571s Selecting previously unselected package r-bioc-rhdf5filters. 571s Preparing to unpack .../238-r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.deb ... 571s Unpacking r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 571s Selecting previously unselected package r-bioc-rhdf5. 571s Preparing to unpack .../239-r-bioc-rhdf5_2.46.1+dfsg-1_amd64.deb ... 571s Unpacking r-bioc-rhdf5 (2.46.1+dfsg-1) ... 571s Selecting previously unselected package r-bioc-hdf5array. 571s Preparing to unpack .../240-r-bioc-hdf5array_1.30.1-1_amd64.deb ... 571s Unpacking r-bioc-hdf5array (1.30.1-1) ... 571s Selecting previously unselected package r-bioc-summarizedexperiment. 571s Preparing to unpack .../241-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 571s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 571s Selecting previously unselected package r-cran-generics. 571s Preparing to unpack .../242-r-cran-generics_0.1.3-1_all.deb ... 571s Unpacking r-cran-generics (0.1.3-1) ... 572s Selecting previously unselected package r-cran-fansi. 572s Preparing to unpack .../243-r-cran-fansi_1.0.5-1_amd64.deb ... 572s Unpacking r-cran-fansi (1.0.5-1) ... 572s Selecting previously unselected package r-cran-utf8. 572s Preparing to unpack .../244-r-cran-utf8_1.2.4-1_amd64.deb ... 572s Unpacking r-cran-utf8 (1.2.4-1) ... 572s Selecting previously unselected package r-cran-pillar. 572s Preparing to unpack .../245-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 572s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 572s Selecting previously unselected package r-cran-pkgconfig. 572s Preparing to unpack .../246-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 572s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 572s Selecting previously unselected package r-cran-tibble. 572s Preparing to unpack .../247-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 572s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 572s Selecting previously unselected package r-cran-tidyselect. 572s Preparing to unpack .../248-r-cran-tidyselect_1.2.0+dfsg-1_amd64.deb ... 572s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 572s Selecting previously unselected package r-cran-dplyr. 572s Preparing to unpack .../249-r-cran-dplyr_1.1.4-1_amd64.deb ... 572s Unpacking r-cran-dplyr (1.1.4-1) ... 572s Selecting previously unselected package r-cran-purrr. 572s Preparing to unpack .../250-r-cran-purrr_1.0.2-1_amd64.deb ... 572s Unpacking r-cran-purrr (1.0.2-1) ... 572s Selecting previously unselected package r-cran-cpp11. 572s Preparing to unpack .../251-r-cran-cpp11_0.4.7-1_all.deb ... 572s Unpacking r-cran-cpp11 (0.4.7-1) ... 572s Selecting previously unselected package r-cran-tidyr. 572s Preparing to unpack .../252-r-cran-tidyr_1.3.1-1_amd64.deb ... 572s Unpacking r-cran-tidyr (1.3.1-1) ... 572s Selecting previously unselected package r-bioc-multiassayexperiment. 572s Preparing to unpack .../253-r-bioc-multiassayexperiment_1.28.0+dfsg-1_all.deb ... 572s Unpacking r-bioc-multiassayexperiment (1.28.0+dfsg-1) ... 572s Selecting previously unselected package r-cran-backports. 572s Preparing to unpack .../254-r-cran-backports_1.4.1-1_amd64.deb ... 572s Unpacking r-cran-backports (1.4.1-1) ... 572s Selecting previously unselected package r-cran-bit. 572s Preparing to unpack .../255-r-cran-bit_4.0.5-1_amd64.deb ... 572s Unpacking r-cran-bit (4.0.5-1) ... 572s Selecting previously unselected package r-cran-bit64. 572s Preparing to unpack .../256-r-cran-bit64_4.0.5-1_amd64.deb ... 572s Unpacking r-cran-bit64 (4.0.5-1) ... 572s Selecting previously unselected package r-cran-boot. 572s Preparing to unpack .../257-r-cran-boot_1.3-30-1_all.deb ... 572s Unpacking r-cran-boot (1.3-30-1) ... 572s Selecting previously unselected package r-cran-brio. 572s Preparing to unpack .../258-r-cran-brio_1.1.4-1_amd64.deb ... 572s Unpacking r-cran-brio (1.1.4-1) ... 572s Selecting previously unselected package r-cran-broom. 572s Preparing to unpack .../259-r-cran-broom_1.0.5+dfsg-1_all.deb ... 572s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 572s Selecting previously unselected package r-cran-ps. 572s Preparing to unpack .../260-r-cran-ps_1.7.6-1_amd64.deb ... 572s Unpacking r-cran-ps (1.7.6-1) ... 572s Selecting previously unselected package r-cran-processx. 572s Preparing to unpack .../261-r-cran-processx_3.8.3-1_amd64.deb ... 572s Unpacking r-cran-processx (3.8.3-1) ... 572s Selecting previously unselected package r-cran-callr. 572s Preparing to unpack .../262-r-cran-callr_3.7.3-2_all.deb ... 572s Unpacking r-cran-callr (3.7.3-2) ... 572s Selecting previously unselected package r-cran-cardata. 572s Preparing to unpack .../263-r-cran-cardata_3.0.5-1_all.deb ... 572s Unpacking r-cran-cardata (3.0.5-1) ... 572s Selecting previously unselected package r-cran-mass. 572s Preparing to unpack .../264-r-cran-mass_7.3-60.0.1-1_amd64.deb ... 572s Unpacking r-cran-mass (7.3-60.0.1-1) ... 572s Selecting previously unselected package r-cran-nlme. 572s Preparing to unpack .../265-r-cran-nlme_3.1.164-1_amd64.deb ... 572s Unpacking r-cran-nlme (3.1.164-1) ... 573s Selecting previously unselected package r-cran-mgcv. 573s Preparing to unpack .../266-r-cran-mgcv_1.9-1-1_amd64.deb ... 573s Unpacking r-cran-mgcv (1.9-1-1) ... 573s Selecting previously unselected package r-cran-nnet. 573s Preparing to unpack .../267-r-cran-nnet_7.3-19-2_amd64.deb ... 573s Unpacking r-cran-nnet (7.3-19-2) ... 573s Selecting previously unselected package r-cran-minqa. 573s Preparing to unpack .../268-r-cran-minqa_1.2.6-1_amd64.deb ... 573s Unpacking r-cran-minqa (1.2.6-1) ... 573s Selecting previously unselected package libnlopt0:amd64. 573s Preparing to unpack .../269-libnlopt0_2.7.1-5build2_amd64.deb ... 573s Unpacking libnlopt0:amd64 (2.7.1-5build2) ... 573s Selecting previously unselected package r-cran-desc. 573s Preparing to unpack .../270-r-cran-desc_1.4.3-1_all.deb ... 573s Unpacking r-cran-desc (1.4.3-1) ... 573s Selecting previously unselected package r-cran-pkgbuild. 573s Preparing to unpack .../271-r-cran-pkgbuild_1.4.3-1_all.deb ... 573s Unpacking r-cran-pkgbuild (1.4.3-1) ... 573s Selecting previously unselected package r-cran-rprojroot. 573s Preparing to unpack .../272-r-cran-rprojroot_2.0.4-1_all.deb ... 573s Unpacking r-cran-rprojroot (2.0.4-1) ... 573s Selecting previously unselected package r-cran-pkgload. 573s Preparing to unpack .../273-r-cran-pkgload_1.3.4-1_all.deb ... 573s Unpacking r-cran-pkgload (1.3.4-1) ... 573s Selecting previously unselected package r-cran-praise. 573s Preparing to unpack .../274-r-cran-praise_1.0.0-4build1_all.deb ... 573s Unpacking r-cran-praise (1.0.0-4build1) ... 573s Selecting previously unselected package r-cran-diffobj. 573s Preparing to unpack .../275-r-cran-diffobj_0.3.5-1_amd64.deb ... 573s Unpacking r-cran-diffobj (0.3.5-1) ... 573s Selecting previously unselected package r-cran-rematch2. 573s Preparing to unpack .../276-r-cran-rematch2_2.1.2-2build1_all.deb ... 573s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 573s Selecting previously unselected package r-cran-waldo. 573s Preparing to unpack .../277-r-cran-waldo_0.5.2-1build1_all.deb ... 573s Unpacking r-cran-waldo (0.5.2-1build1) ... 573s Selecting previously unselected package r-cran-testthat. 573s Preparing to unpack .../278-r-cran-testthat_3.2.1-1_amd64.deb ... 573s Unpacking r-cran-testthat (3.2.1-1) ... 573s Selecting previously unselected package r-cran-nloptr. 573s Preparing to unpack .../279-r-cran-nloptr_2.0.3-1_amd64.deb ... 573s Unpacking r-cran-nloptr (2.0.3-1) ... 573s Selecting previously unselected package r-cran-rcppeigen. 573s Preparing to unpack .../280-r-cran-rcppeigen_0.3.3.9.4-1_amd64.deb ... 573s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 573s Selecting previously unselected package r-cran-statmod. 573s Preparing to unpack .../281-r-cran-statmod_1.5.0-1_amd64.deb ... 573s Unpacking r-cran-statmod (1.5.0-1) ... 573s Selecting previously unselected package r-cran-lme4. 573s Preparing to unpack .../282-r-cran-lme4_1.1-35.1-4_amd64.deb ... 573s Unpacking r-cran-lme4 (1.1-35.1-4) ... 573s Selecting previously unselected package r-cran-numderiv. 573s Preparing to unpack .../283-r-cran-numderiv_2016.8-1.1-3_all.deb ... 573s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 573s Selecting previously unselected package r-cran-pbkrtest. 573s Preparing to unpack .../284-r-cran-pbkrtest_0.5.2-2_all.deb ... 573s Unpacking r-cran-pbkrtest (0.5.2-2) ... 574s Selecting previously unselected package r-cran-sparsem. 574s Preparing to unpack .../285-r-cran-sparsem_1.81-1_amd64.deb ... 574s Unpacking r-cran-sparsem (1.81-1) ... 574s Selecting previously unselected package r-cran-matrixmodels. 574s Preparing to unpack .../286-r-cran-matrixmodels_0.5-3-1_all.deb ... 574s Unpacking r-cran-matrixmodels (0.5-3-1) ... 574s Selecting previously unselected package r-cran-survival. 574s Preparing to unpack .../287-r-cran-survival_3.5-8-1_amd64.deb ... 574s Unpacking r-cran-survival (3.5-8-1) ... 574s Selecting previously unselected package r-cran-rcpparmadillo. 574s Preparing to unpack .../288-r-cran-rcpparmadillo_0.12.8.0.0-1_amd64.deb ... 574s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 574s Selecting previously unselected package r-cran-gtable. 574s Preparing to unpack .../289-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 574s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 574s Selecting previously unselected package r-cran-isoband. 574s Preparing to unpack .../290-r-cran-isoband_0.2.7-1_amd64.deb ... 574s Unpacking r-cran-isoband (0.2.7-1) ... 574s Selecting previously unselected package r-cran-farver. 574s Preparing to unpack .../291-r-cran-farver_2.1.1-1_amd64.deb ... 574s Unpacking r-cran-farver (2.1.1-1) ... 574s Selecting previously unselected package r-cran-labeling. 574s Preparing to unpack .../292-r-cran-labeling_0.4.3-1_all.deb ... 574s Unpacking r-cran-labeling (0.4.3-1) ... 574s Selecting previously unselected package r-cran-colorspace. 574s Preparing to unpack .../293-r-cran-colorspace_2.1-0+dfsg-1_amd64.deb ... 574s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 574s Selecting previously unselected package r-cran-munsell. 574s Preparing to unpack .../294-r-cran-munsell_0.5.0-2build1_all.deb ... 574s Unpacking r-cran-munsell (0.5.0-2build1) ... 574s Selecting previously unselected package r-cran-rcolorbrewer. 574s Preparing to unpack .../295-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 574s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 574s Selecting previously unselected package r-cran-viridislite. 574s Preparing to unpack .../296-r-cran-viridislite_0.4.2-2_all.deb ... 574s Unpacking r-cran-viridislite (0.4.2-2) ... 574s Selecting previously unselected package r-cran-scales. 574s Preparing to unpack .../297-r-cran-scales_1.3.0-1_all.deb ... 574s Unpacking r-cran-scales (1.3.0-1) ... 574s Selecting previously unselected package r-cran-ggplot2. 574s Preparing to unpack .../298-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 574s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 574s Selecting previously unselected package r-cran-class. 574s Preparing to unpack .../299-r-cran-class_7.3-22-2_amd64.deb ... 574s Unpacking r-cran-class (7.3-22-2) ... 574s Selecting previously unselected package r-cran-proxy. 574s Preparing to unpack .../300-r-cran-proxy_0.4-27-1_amd64.deb ... 574s Unpacking r-cran-proxy (0.4-27-1) ... 574s Selecting previously unselected package r-cran-e1071. 574s Preparing to unpack .../301-r-cran-e1071_1.7-14-1_amd64.deb ... 574s Unpacking r-cran-e1071 (1.7-14-1) ... 575s Selecting previously unselected package r-cran-codetools. 575s Preparing to unpack .../302-r-cran-codetools_0.2-19-1_all.deb ... 575s Unpacking r-cran-codetools (0.2-19-1) ... 575s Selecting previously unselected package r-cran-iterators. 575s Preparing to unpack .../303-r-cran-iterators_1.0.14-1_all.deb ... 575s Unpacking r-cran-iterators (1.0.14-1) ... 575s Selecting previously unselected package r-cran-foreach. 575s Preparing to unpack .../304-r-cran-foreach_1.5.2-1_all.deb ... 575s Unpacking r-cran-foreach (1.5.2-1) ... 575s Selecting previously unselected package r-cran-data.table. 575s Preparing to unpack .../305-r-cran-data.table_1.14.10+dfsg-1_amd64.deb ... 575s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 575s Selecting previously unselected package r-cran-modelmetrics. 575s Preparing to unpack .../306-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 575s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 575s Selecting previously unselected package r-cran-plyr. 575s Preparing to unpack .../307-r-cran-plyr_1.8.9-1_amd64.deb ... 575s Unpacking r-cran-plyr (1.8.9-1) ... 575s Selecting previously unselected package r-cran-proc. 575s Preparing to unpack .../308-r-cran-proc_1.18.5-1_amd64.deb ... 575s Unpacking r-cran-proc (1.18.5-1) ... 575s Selecting previously unselected package r-cran-tzdb. 575s Preparing to unpack .../309-r-cran-tzdb_0.4.0-2_amd64.deb ... 575s Unpacking r-cran-tzdb (0.4.0-2) ... 575s Selecting previously unselected package r-cran-clock. 575s Preparing to unpack .../310-r-cran-clock_0.7.0-1.1_amd64.deb ... 575s Unpacking r-cran-clock (0.7.0-1.1) ... 575s Selecting previously unselected package r-cran-gower. 575s Preparing to unpack .../311-r-cran-gower_1.0.1-1_amd64.deb ... 575s Unpacking r-cran-gower (1.0.1-1) ... 575s Selecting previously unselected package r-cran-hardhat. 575s Preparing to unpack .../312-r-cran-hardhat_1.3.1+dfsg-1_all.deb ... 575s Unpacking r-cran-hardhat (1.3.1+dfsg-1) ... 575s Selecting previously unselected package r-cran-rpart. 575s Preparing to unpack .../313-r-cran-rpart_4.1.23-1_amd64.deb ... 575s Unpacking r-cran-rpart (4.1.23-1) ... 575s Selecting previously unselected package r-cran-shape. 575s Preparing to unpack .../314-r-cran-shape_1.4.6-1_all.deb ... 575s Unpacking r-cran-shape (1.4.6-1) ... 575s Selecting previously unselected package r-cran-diagram. 575s Preparing to unpack .../315-r-cran-diagram_1.6.5-2_all.deb ... 575s Unpacking r-cran-diagram (1.6.5-2) ... 575s Selecting previously unselected package r-cran-kernsmooth. 575s Preparing to unpack .../316-r-cran-kernsmooth_2.23-22-1_amd64.deb ... 575s Unpacking r-cran-kernsmooth (2.23-22-1) ... 575s Selecting previously unselected package r-cran-globals. 575s Preparing to unpack .../317-r-cran-globals_0.16.2-1_all.deb ... 575s Unpacking r-cran-globals (0.16.2-1) ... 575s Selecting previously unselected package r-cran-listenv. 575s Preparing to unpack .../318-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 575s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 575s Selecting previously unselected package r-cran-parallelly. 575s Preparing to unpack .../319-r-cran-parallelly_1.37.1-1_amd64.deb ... 575s Unpacking r-cran-parallelly (1.37.1-1) ... 575s Selecting previously unselected package r-cran-future. 575s Preparing to unpack .../320-r-cran-future_1.33.1+dfsg-1_all.deb ... 575s Unpacking r-cran-future (1.33.1+dfsg-1) ... 575s Selecting previously unselected package r-cran-future.apply. 575s Preparing to unpack .../321-r-cran-future.apply_1.11.1+dfsg-1_all.deb ... 575s Unpacking r-cran-future.apply (1.11.1+dfsg-1) ... 575s Selecting previously unselected package r-cran-progressr. 575s Preparing to unpack .../322-r-cran-progressr_0.14.0-1_all.deb ... 575s Unpacking r-cran-progressr (0.14.0-1) ... 575s Selecting previously unselected package r-cran-squarem. 575s Preparing to unpack .../323-r-cran-squarem_2021.1-1_all.deb ... 575s Unpacking r-cran-squarem (2021.1-1) ... 575s Selecting previously unselected package r-cran-lava. 575s Preparing to unpack .../324-r-cran-lava_1.7.3+dfsg-1_all.deb ... 575s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 576s Selecting previously unselected package r-cran-prodlim. 576s Preparing to unpack .../325-r-cran-prodlim_2023.08.28-1_amd64.deb ... 576s Unpacking r-cran-prodlim (2023.08.28-1) ... 576s Selecting previously unselected package r-cran-ipred. 576s Preparing to unpack .../326-r-cran-ipred_0.9-14-1_amd64.deb ... 576s Unpacking r-cran-ipred (0.9-14-1) ... 576s Selecting previously unselected package r-cran-timechange. 576s Preparing to unpack .../327-r-cran-timechange_0.3.0-1_amd64.deb ... 576s Unpacking r-cran-timechange (0.3.0-1) ... 576s Selecting previously unselected package r-cran-lubridate. 576s Preparing to unpack .../328-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 576s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 576s Selecting previously unselected package r-cran-timedate. 576s Preparing to unpack .../329-r-cran-timedate_4032.109-1_amd64.deb ... 576s Unpacking r-cran-timedate (4032.109-1) ... 576s Selecting previously unselected package r-cran-recipes. 576s Preparing to unpack .../330-r-cran-recipes_1.0.9+dfsg-1_all.deb ... 576s Unpacking r-cran-recipes (1.0.9+dfsg-1) ... 576s Selecting previously unselected package r-cran-reshape2. 576s Preparing to unpack .../331-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 576s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 576s Selecting previously unselected package r-cran-caret. 576s Preparing to unpack .../332-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 576s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 576s Selecting previously unselected package r-cran-conquer. 576s Preparing to unpack .../333-r-cran-conquer_1.3.3-1_amd64.deb ... 576s Unpacking r-cran-conquer (1.3.3-1) ... 576s Selecting previously unselected package r-cran-quantreg. 576s Preparing to unpack .../334-r-cran-quantreg_5.97-1_amd64.deb ... 576s Unpacking r-cran-quantreg (5.97-1) ... 576s Selecting previously unselected package r-cran-sp. 576s Preparing to unpack .../335-r-cran-sp_1%3a2.1-2+dfsg-1_amd64.deb ... 576s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 576s Selecting previously unselected package r-cran-foreign. 576s Preparing to unpack .../336-r-cran-foreign_0.8.86-1_amd64.deb ... 576s Unpacking r-cran-foreign (0.8.86-1) ... 576s Selecting previously unselected package r-cran-maptools. 576s Preparing to unpack .../337-r-cran-maptools_1%3a1.1-8+dfsg-1_amd64.deb ... 576s Unpacking r-cran-maptools (1:1.1-8+dfsg-1) ... 576s Selecting previously unselected package r-cran-forcats. 576s Preparing to unpack .../338-r-cran-forcats_1.0.0-1_all.deb ... 576s Unpacking r-cran-forcats (1.0.0-1) ... 576s Selecting previously unselected package r-cran-hms. 576s Preparing to unpack .../339-r-cran-hms_1.1.3-1_all.deb ... 576s Unpacking r-cran-hms (1.1.3-1) ... 576s Selecting previously unselected package r-cran-clipr. 576s Preparing to unpack .../340-r-cran-clipr_0.8.0-1_all.deb ... 576s Unpacking r-cran-clipr (0.8.0-1) ... 576s Selecting previously unselected package r-cran-prettyunits. 576s Preparing to unpack .../341-r-cran-prettyunits_1.2.0-1_all.deb ... 576s Unpacking r-cran-prettyunits (1.2.0-1) ... 576s Selecting previously unselected package r-cran-progress. 576s Preparing to unpack .../342-r-cran-progress_1.2.3-1_all.deb ... 576s Unpacking r-cran-progress (1.2.3-1) ... 576s Selecting previously unselected package r-cran-vroom. 576s Preparing to unpack .../343-r-cran-vroom_1.6.5-1_amd64.deb ... 576s Unpacking r-cran-vroom (1.6.5-1) ... 576s Selecting previously unselected package r-cran-readr. 576s Preparing to unpack .../344-r-cran-readr_2.1.5-1_amd64.deb ... 576s Unpacking r-cran-readr (2.1.5-1) ... 576s Selecting previously unselected package r-cran-haven. 576s Preparing to unpack .../345-r-cran-haven_2.5.4-1_amd64.deb ... 576s Unpacking r-cran-haven (2.5.4-1) ... 576s Selecting previously unselected package r-cran-curl. 576s Preparing to unpack .../346-r-cran-curl_5.2.0+dfsg-1_amd64.deb ... 576s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 577s Selecting previously unselected package r-cran-rematch. 577s Preparing to unpack .../347-r-cran-rematch_2.0.0-1_all.deb ... 577s Unpacking r-cran-rematch (2.0.0-1) ... 577s Selecting previously unselected package r-cran-cellranger. 577s Preparing to unpack .../348-r-cran-cellranger_1.1.0-3_all.deb ... 577s Unpacking r-cran-cellranger (1.1.0-3) ... 577s Selecting previously unselected package r-cran-readxl. 577s Preparing to unpack .../349-r-cran-readxl_1.4.3-1_amd64.deb ... 577s Unpacking r-cran-readxl (1.4.3-1) ... 577s Selecting previously unselected package r-cran-writexl. 577s Preparing to unpack .../350-r-cran-writexl_1.5.0-1_amd64.deb ... 577s Unpacking r-cran-writexl (1.5.0-1) ... 577s Selecting previously unselected package r-cran-r.methodss3. 577s Preparing to unpack .../351-r-cran-r.methodss3_1.8.2-1_all.deb ... 577s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 577s Selecting previously unselected package r-cran-r.oo. 577s Preparing to unpack .../352-r-cran-r.oo_1.26.0-1_all.deb ... 577s Unpacking r-cran-r.oo (1.26.0-1) ... 577s Selecting previously unselected package r-cran-r.utils. 577s Preparing to unpack .../353-r-cran-r.utils_2.12.3-1_all.deb ... 577s Unpacking r-cran-r.utils (2.12.3-1) ... 577s Selecting previously unselected package r-cran-zip. 577s Preparing to unpack .../354-r-cran-zip_2.3.1-1_amd64.deb ... 577s Unpacking r-cran-zip (2.3.1-1) ... 577s Selecting previously unselected package r-cran-openxlsx. 577s Preparing to unpack .../355-r-cran-openxlsx_4.2.5.2-1_amd64.deb ... 577s Unpacking r-cran-openxlsx (4.2.5.2-1) ... 577s Selecting previously unselected package r-cran-rio. 577s Preparing to unpack .../356-r-cran-rio_1.0.1-1_all.deb ... 577s Unpacking r-cran-rio (1.0.1-1) ... 577s Selecting previously unselected package r-cran-car. 577s Preparing to unpack .../357-r-cran-car_3.1-2-2_all.deb ... 577s Unpacking r-cran-car (3.1-2-2) ... 577s Selecting previously unselected package r-cran-corrplot. 577s Preparing to unpack .../358-r-cran-corrplot_0.92-1_all.deb ... 577s Unpacking r-cran-corrplot (0.92-1) ... 577s Selecting previously unselected package r-cran-cowplot. 577s Preparing to unpack .../359-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 577s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 577s Selecting previously unselected package r-cran-exactranktests. 577s Preparing to unpack .../360-r-cran-exactranktests_0.8-35-1_amd64.deb ... 577s Unpacking r-cran-exactranktests (0.8-35-1) ... 577s Selecting previously unselected package r-cran-ggrepel. 577s Preparing to unpack .../361-r-cran-ggrepel_0.9.5-1_amd64.deb ... 577s Unpacking r-cran-ggrepel (0.9.5-1) ... 577s Selecting previously unselected package r-cran-ggsci. 577s Preparing to unpack .../362-r-cran-ggsci_3.0.1-1_all.deb ... 577s Unpacking r-cran-ggsci (3.0.1-1) ... 577s Selecting previously unselected package r-cran-ggsignif. 577s Preparing to unpack .../363-r-cran-ggsignif_0.6.4-1_all.deb ... 577s Unpacking r-cran-ggsignif (0.6.4-1) ... 577s Selecting previously unselected package r-cran-gridextra. 577s Preparing to unpack .../364-r-cran-gridextra_2.3-3build1_all.deb ... 577s Unpacking r-cran-gridextra (2.3-3build1) ... 577s Selecting previously unselected package r-cran-polynom. 577s Preparing to unpack .../365-r-cran-polynom_1.4-1+dfsg-1_all.deb ... 577s Unpacking r-cran-polynom (1.4-1+dfsg-1) ... 577s Selecting previously unselected package r-cran-rstatix. 577s Preparing to unpack .../366-r-cran-rstatix_0.7.2-1_all.deb ... 577s Unpacking r-cran-rstatix (0.7.2-1) ... 577s Selecting previously unselected package r-cran-ggpubr. 577s Preparing to unpack .../367-r-cran-ggpubr_0.6.0-1_all.deb ... 577s Unpacking r-cran-ggpubr (0.6.0-1) ... 577s Selecting previously unselected package r-cran-markdown. 578s Preparing to unpack .../368-r-cran-markdown_1.12+dfsg-1_all.deb ... 578s Unpacking r-cran-markdown (1.12+dfsg-1) ... 578s Selecting previously unselected package r-cran-png. 578s Preparing to unpack .../369-r-cran-png_0.1-8-1_amd64.deb ... 578s Unpacking r-cran-png (0.1-8-1) ... 578s Selecting previously unselected package r-cran-jpeg. 578s Preparing to unpack .../370-r-cran-jpeg_0.1-10-1_amd64.deb ... 578s Unpacking r-cran-jpeg (0.1-10-1) ... 578s Selecting previously unselected package r-cran-xml2. 578s Preparing to unpack .../371-r-cran-xml2_1.3.6-1_amd64.deb ... 578s Unpacking r-cran-xml2 (1.3.6-1) ... 578s Selecting previously unselected package r-cran-gridtext. 578s Preparing to unpack .../372-r-cran-gridtext_0.1.5-2_amd64.deb ... 578s Unpacking r-cran-gridtext (0.1.5-2) ... 578s Selecting previously unselected package r-cran-ggtext. 578s Preparing to unpack .../373-r-cran-ggtext_0.1.2-1_all.deb ... 578s Unpacking r-cran-ggtext (0.1.2-1) ... 578s Selecting previously unselected package r-cran-km.ci. 578s Preparing to unpack .../374-r-cran-km.ci_0.5-6-1_all.deb ... 578s Unpacking r-cran-km.ci (0.5-6-1) ... 578s Selecting previously unselected package r-cran-kmsurv. 578s Preparing to unpack .../375-r-cran-kmsurv_0.1-5-2build1_amd64.deb ... 578s Unpacking r-cran-kmsurv (0.1-5-2build1) ... 578s Selecting previously unselected package r-cran-mvtnorm. 578s Preparing to unpack .../376-r-cran-mvtnorm_1.2-4-1_amd64.deb ... 578s Unpacking r-cran-mvtnorm (1.2-4-1) ... 578s Selecting previously unselected package r-cran-maxstat. 578s Preparing to unpack .../377-r-cran-maxstat_0.7-25-2build1_amd64.deb ... 578s Unpacking r-cran-maxstat (0.7-25-2build1) ... 578s Selecting previously unselected package r-cran-r.cache. 578s Preparing to unpack .../378-r-cran-r.cache_0.16.0-1_all.deb ... 578s Unpacking r-cran-r.cache (0.16.0-1) ... 578s Selecting previously unselected package tcl8.6. 578s Preparing to unpack .../379-tcl8.6_8.6.13+dfsg-2_amd64.deb ... 578s Unpacking tcl8.6 (8.6.13+dfsg-2) ... 578s Selecting previously unselected package tcl. 578s Preparing to unpack .../380-tcl_8.6.13_amd64.deb ... 578s Unpacking tcl (8.6.13) ... 578s Selecting previously unselected package r-cran-r.rsp. 578s Preparing to unpack .../381-r-cran-r.rsp_0.46.0+ds-1_all.deb ... 578s Unpacking r-cran-r.rsp (0.46.0+ds-1) ... 578s Selecting previously unselected package r-cran-zoo. 578s Preparing to unpack .../382-r-cran-zoo_1.8-12-2_amd64.deb ... 578s Unpacking r-cran-zoo (1.8-12-2) ... 578s Selecting previously unselected package r-cran-survmisc. 578s Preparing to unpack .../383-r-cran-survmisc_0.5.6-1_all.deb ... 578s Unpacking r-cran-survmisc (0.5.6-1) ... 578s Selecting previously unselected package r-cran-survminer. 578s Preparing to unpack .../384-r-cran-survminer_0.4.9+dfsg-1_all.deb ... 578s Unpacking r-cran-survminer (0.4.9+dfsg-1) ... 578s Selecting previously unselected package r-cran-upsetr. 578s Preparing to unpack .../385-r-cran-upsetr_1.4.0+dfsg-2_all.deb ... 578s Unpacking r-cran-upsetr (1.4.0+dfsg-2) ... 578s Setting up libjs-json (0~20221030+~1.0.8-1) ... 578s Setting up javascript-common (11+nmu1) ... 578s Setting up libgraphite2-3:amd64 (1.3.14-2) ... 578s Setting up libpixman-1-0:amd64 (0.42.2-1) ... 578s Setting up libsharpyuv0:amd64 (1.3.2-0.4) ... 578s Setting up libpaper1:amd64 (1.1.29) ... 578s 578s Creating config file /etc/papersize with new version 579s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 579s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 579s Setting up libxpm4:amd64 (1:3.5.17-1) ... 579s Setting up hdf5-helpers (1.10.10+repack-3ubuntu1) ... 579s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 579s Setting up libxi6:amd64 (2:1.8.1-1) ... 579s Setting up libxrender1:amd64 (1:0.9.10-1.1) ... 579s Setting up libdatrie1:amd64 (0.2.13-3) ... 579s Setting up libjs-popper.js (1.16.1+ds-6) ... 579s Setting up libxcb-render0:amd64 (1.15-1) ... 579s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 579s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 579s Setting up libjs-lunr (2.3.9~dfsg-2) ... 579s Setting up unzip (6.0-28ubuntu3) ... 579s Setting up liblatex-tounicode-perl (0.54-2) ... 579s Setting up x11-common (1:7.7+23ubuntu2) ... 579s Setting up node-html5shiv (3.7.3+dfsg-5) ... 579s Setting up libdeflate0:amd64 (1.19-1) ... 579s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 579s Setting up libnlopt0:amd64 (2.7.1-5build2) ... 579s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 579s Setting up libxcb-shm0:amd64 (1.15-1) ... 579s Setting up libzzip-0-13:amd64 (0.13.72+dfsg.1-1.1) ... 579s Setting up libpaper-utils (1.1.29) ... 579s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libjs-modernizr (2.6.2+ds1-5) ... 579s Setting up libjbig0:amd64 (2.1-6.1ubuntu1) ... 579s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 579s Setting up libaec0:amd64 (1.1.2-1) ... 579s Setting up libsnappy1v5:amd64 (1.1.10-1) ... 579s Setting up libjs-es5-shim (4.6.7-2) ... 579s Setting up tex-common (6.18) ... 579s update-language: texlive-base not installed and configured, doing nothing! 579s Setting up libio-string-perl (1.08-4) ... 579s Setting up zip (3.0-13) ... 579s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 579s Setting up libblas3:amd64 (3.12.0-3) ... 579s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 579s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 579s Setting up libpkgconf3:amd64 (1.8.1-2) ... 579s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 579s Setting up libcurl4-openssl-dev:amd64 (8.5.0-2ubuntu2) ... 579s Setting up libteckit0:amd64 (2.5.12+ds1-1) ... 579s Setting up t1utils (1.41-4build2) ... 579s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libtexlua53-5:amd64 (2023.20230311.66589-9) ... 579s Setting up libjs-d3 (3.5.17-4) ... 579s Setting up fonts-dejavu-mono (2.37-8) ... 579s Setting up libssl-dev:amd64 (3.0.10-1ubuntu4) ... 579s Setting up libmpc3:amd64 (1.3.1-1) ... 579s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... 579s Setting up icu-devtools (74.2-1ubuntu1) ... 579s Setting up fonts-dejavu-core (2.37-8) ... 579s Setting up pkgconf-bin (1.8.1-2) ... 579s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 579s Setting up libkpathsea6:amd64 (2023.20230311.66589-9) ... 579s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libwebp7:amd64 (1.3.2-0.4) ... 579s Setting up liblzma-dev:amd64 (5.4.5-0.3) ... 579s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 579s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 579s Setting up libnsl-dev:amd64 (1.3.0-3) ... 579s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 579s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libblosc1:amd64 (1.21.5+ds-1) ... 579s Setting up fonts-lmodern (2.005-1) ... 579s Setting up liblua5.4-0:amd64 (5.4.6-3) ... 579s Setting up libharfbuzz0b:amd64 (8.3.0-2) ... 579s Setting up libthai-data (0.1.29-2) ... 579s Setting up node-bootstrap-sass (3.4.3-2) ... 579s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 579s Setting up libxss1:amd64 (1:1.2.3-1build2) ... 579s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 579s Setting up pandoc-data (3.1.3-1) ... 579s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 579s Setting up libisl23:amd64 (0.26-3) ... 579s Setting up libc-dev-bin (2.39-0ubuntu2) ... 579s Setting up node-normalize.css (8.0.1-5) ... 579s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 579s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 579s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 579s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 579s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libblas-dev:amd64 (3.12.0-3) ... 579s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 579s Setting up libsz2:amd64 (1.1.2-1) ... 579s Setting up dctrl-tools (2.24-3build2) ... 579s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 579s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 579s Setting up libsynctex2:amd64 (2023.20230311.66589-9) ... 579s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 579s Setting up libpotrace0:amd64 (1.16-2) ... 579s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 579s Setting up libice6:amd64 (2:1.0.10-1build2) ... 579s Setting up tcl8.6 (8.6.13+dfsg-2) ... 579s Setting up liblapack3:amd64 (3.12.0-3) ... 579s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 579s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 579s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 580s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 580s Setting up libaec-dev:amd64 (1.1.2-1) ... 580s Setting up libbibtex-parser-perl (1.04+dfsg-1) ... 580s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 580s Setting up pkgconf:amd64 (1.8.1-2) ... 580s Setting up libthai0:amd64 (0.1.29-2) ... 580s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 580s Setting up libptexenc1:amd64 (2023.20230311.66589-9) ... 580s Setting up pandoc (3.1.3+ds-2) ... 580s Setting up liblapack-dev:amd64 (3.12.0-3) ... 580s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 580s Setting up pkg-config:amd64 (1.8.1-2) ... 580s Setting up libhdf5-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 580s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 580s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 580s Setting up tcl (8.6.13) ... 580s Setting up libhdf5-cpp-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 580s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 580s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 580s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 580s Setting up libsm6:amd64 (2:1.2.3-1build2) ... 580s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ... 580s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 580s Setting up libhdf5-hl-100:amd64 (1.10.10+repack-3ubuntu1) ... 580s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 580s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 580s Setting up fontconfig (2.15.0-1ubuntu1) ... 582s Regenerating fonts cache... done. 582s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 582s Setting up libxft2:amd64 (2.3.6-1) ... 582s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 582s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ... 582s Setting up cpp-13 (13.2.0-17ubuntu2) ... 582s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 582s Setting up libtk8.6:amd64 (8.6.13-2) ... 582s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ... 582s Setting up libreadline-dev:amd64 (8.2-3) ... 582s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 582s Setting up libcairo2:amd64 (1.18.0-1) ... 582s Setting up libhdf5-hl-cpp-100:amd64 (1.10.10+repack-3ubuntu1) ... 582s Setting up gcc-13 (13.2.0-17ubuntu2) ... 582s Setting up libhdf5-fortran-102:amd64 (1.10.10+repack-3ubuntu1) ... 582s Setting up libxt6:amd64 (1:1.2.1-1.1) ... 582s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 582s Setting up cpp (4:13.2.0-7ubuntu1) ... 582s Setting up libhdf5-hl-fortran-100:amd64 (1.10.10+repack-3ubuntu1) ... 582s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 582s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 582s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 582s Setting up libxmu6:amd64 (2:1.1.3-3) ... 582s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 582s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 582s Setting up libpng-dev:amd64 (1.6.43-1) ... 582s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 582s Setting up libxaw7:amd64 (2:1.0.14-1) ... 582s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 582s Setting up gcc (4:13.2.0-7ubuntu1) ... 582s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 582s Setting up r-base-core (4.3.2-1build1) ... 582s 582s Creating config file /etc/R/Renviron with new version 582s Setting up r-cran-crayon (1.5.2-1) ... 582s Setting up r-cran-squarem (2021.1-1) ... 582s Setting up libhdf5-dev (1.10.10+repack-3ubuntu1) ... 582s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 582s Setting up r-cran-labeling (0.4.3-1) ... 582s Setting up r-cran-sourcetools (0.1.7-1-1) ... 582s Setting up r-cran-lattice (0.22-5-1) ... 582s Setting up r-cran-ps (1.7.6-1) ... 582s Setting up r-cran-nlme (3.1.164-1) ... 582s Setting up r-cran-farver (2.1.1-1) ... 582s Setting up r-cran-zip (2.3.1-1) ... 582s Setting up r-cran-viridislite (0.4.2-2) ... 582s Setting up texlive-binaries (2023.20230311.66589-9) ... 582s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 582s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 582s Setting up r-cran-sparsem (1.81-1) ... 582s Setting up r-cran-statmod (1.5.0-1) ... 582s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 582s Setting up r-cran-nnet (7.3-19-2) ... 582s Setting up r-cran-clipr (0.8.0-1) ... 582s Setting up r-cran-polynom (1.4-1+dfsg-1) ... 582s Setting up r-cran-commonmark (1.9.1-1) ... 582s Setting up r-cran-proxy (0.4-27-1) ... 582s Setting up r-cran-r6 (2.5.1-1) ... 582s Setting up r-cran-pkgkitten (0.2.3-1) ... 582s Setting up r-cran-jpeg (0.1-10-1) ... 582s Setting up r-cran-numderiv (2016.8-1.1-3) ... 582s Setting up texlive-base (2023.20240207-1) ... 582s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 583s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 583s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 583s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 584s Setting up r-cran-magrittr (2.0.3-1) ... 584s Setting up r-cran-rappdirs (0.3.3-1) ... 584s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 584s Setting up r-cran-littler (0.3.19-1) ... 584s Setting up r-cran-fs (1.6.3+dfsg-1) ... 584s Setting up r-cran-rcpp (1.0.12-1) ... 584s Setting up r-cran-curl (5.2.0+dfsg-1) ... 584s Setting up r-cran-codetools (0.2-19-1) ... 584s Setting up g++-13 (13.2.0-17ubuntu2) ... 584s Setting up r-cran-brio (1.1.4-1) ... 584s Setting up r-cran-boot (1.3-30-1) ... 584s Setting up r-cran-diffobj (0.3.5-1) ... 584s Setting up r-cran-rematch (2.0.0-1) ... 584s Setting up r-bioc-biocgenerics (0.48.1-2) ... 584s Setting up r-cran-rlang (1.1.3-1) ... 584s Setting up r-cran-matrixstats (1.2.0-1) ... 584s Setting up r-cran-listenv (0.9.1+dfsg-1) ... 584s Setting up littler (0.3.19-1) ... 584s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 584s Setting up r-cran-xfun (0.41+dfsg-1) ... 584s Setting up r-cran-withr (2.5.0-1) ... 584s Setting up r-cran-backports (1.4.1-1) ... 584s Setting up r-cran-processx (3.8.3-1) ... 584s Setting up r-cran-mime (0.12-1) ... 584s Setting up r-cran-praise (1.0.0-4build1) ... 584s Setting up r-cran-generics (0.1.3-1) ... 584s Setting up r-cran-base64enc (0.1-3-3) ... 584s Setting up r-cran-iterators (1.0.14-1) ... 584s Setting up r-cran-abind (1.4-5-2) ... 584s Setting up r-cran-exactranktests (0.8-35-1) ... 584s Setting up r-cran-digest (0.6.34-1) ... 584s Setting up r-cran-yaml (2.3.8-1) ... 584s Setting up r-cran-gower (1.0.1-1) ... 584s Setting up r-cran-evaluate (0.23-1) ... 584s Setting up r-cran-timedate (4032.109-1) ... 584s Setting up r-cran-highr (0.10+dfsg-1) ... 584s Setting up r-cran-foreach (1.5.2-1) ... 584s Setting up r-cran-prettyunits (1.2.0-1) ... 584s Setting up r-cran-fansi (1.0.5-1) ... 584s Setting up r-cran-cardata (3.0.5-1) ... 584s Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 584s Setting up r-cran-mass (7.3-60.0.1-1) ... 584s Setting up r-cran-kmsurv (0.1-5-2build1) ... 584s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 584s Setting up r-cran-glue (1.7.0-1) ... 584s Setting up r-cran-foreign (0.8.86-1) ... 584s Setting up r-cran-writexl (1.5.0-1) ... 584s Setting up r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 584s Setting up r-cran-bit (4.0.5-1) ... 584s Setting up r-cran-xtable (1:1.8-4-2) ... 584s Setting up r-cran-cli (3.6.2-1) ... 584s Setting up gfortran (4:13.2.0-7ubuntu1) ... 584s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 584s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 584s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 584s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 584s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 584s Setting up r-cran-bitops (1.0-7-1) ... 584s Setting up r-cran-rprojroot (2.0.4-1) ... 584s Setting up r-cran-bit64 (4.0.5-1) ... 584s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 584s Setting up r-cran-progressr (0.14.0-1) ... 584s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 584s Setting up r-cran-shape (1.4.6-1) ... 584s Setting up r-cran-fastmap (1.1.1-1) ... 584s Setting up r-cran-png (0.1-8-1) ... 584s Setting up r-cran-r.methodss3 (1.8.2-1) ... 584s Setting up r-bioc-biobase (2.62.0-1) ... 584s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 584s Setting up r-cran-corrplot (0.92-1) ... 584s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 584s Setting up r-cran-sp (1:2.1-2+dfsg-1) ... 584s Setting up r-cran-utf8 (1.2.4-1) ... 584s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 584s Setting up r-cran-parallelly (1.37.1-1) ... 584s Setting up r-cran-stringi (1.8.3-1) ... 584s Setting up texlive-latex-base (2023.20240207-1) ... 584s Setting up r-cran-markdown (1.12+dfsg-1) ... 584s Setting up r-cran-cpp11 (0.4.7-1) ... 584s Setting up r-cran-mvtnorm (1.2-4-1) ... 584s Setting up r-cran-plyr (1.8.9-1) ... 584s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 584s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 584s Setting up r-cran-isoband (0.2.7-1) ... 584s Setting up r-cran-diagram (1.6.5-2) ... 584s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 584s Setting up r-cran-zoo (1.8-12-2) ... 584s Setting up r-cran-later (1.3.2+dfsg-1) ... 584s Setting up r-cran-matrix (1.6-5-1) ... 584s Setting up r-cran-tinytex (0.49-1) ... 584s Setting up r-cran-kernsmooth (2.23-22-1) ... 584s Setting up r-cran-knitr (1.45+dfsg-1) ... 584s Setting up r-cran-mgcv (1.9-1-1) ... 584s Setting up g++ (4:13.2.0-7ubuntu1) ... 584s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 584s Setting up r-cran-cachem (1.0.8-1) ... 584s Setting up r-bioc-biocbaseutils (1.4.0+dfsg-1) ... 584s Setting up build-essential (12.10ubuntu1) ... 584s Setting up r-cran-rcpparmadillo (0.12.8.0.0-1) ... 584s Setting up r-bioc-iranges (2.36.0-1) ... 584s Setting up r-cran-tzdb (0.4.0-2) ... 584s Setting up r-cran-globals (0.16.2-1) ... 584s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 584s Setting up r-cran-maptools (1:1.1-8+dfsg-1) ... 584s Setting up r-cran-vctrs (0.6.5-1) ... 584s Setting up r-cran-rcppeigen (0.3.3.9.4-1) ... 584s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 584s Setting up r-cran-ellipsis (0.3.2-2) ... 584s Setting up r-cran-minqa (1.2.6-1) ... 584s Setting up r-base-dev (4.3.2-1build1) ... 584s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 584s Setting up r-cran-stringr (1.5.1-1) ... 584s Setting up r-cran-class (7.3-22-2) ... 584s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ... 584s Setting up r-cran-callr (3.7.3-2) ... 584s Setting up r-cran-openxlsx (4.2.5.2-1) ... 584s Setting up r-cran-maxstat (0.7-25-2build1) ... 584s Setting up r-cran-matrixmodels (0.5-3-1) ... 584s Setting up r-cran-desc (1.4.3-1) ... 584s Setting up r-cran-xml2 (1.3.6-1) ... 584s Setting up r-bioc-rhdf5 (2.46.1+dfsg-1) ... 584s Setting up r-cran-munsell (0.5.0-2build1) ... 584s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 584s Setting up r-cran-clock (0.7.0-1.1) ... 584s Setting up r-cran-proc (1.18.5-1) ... 584s Setting up r-cran-survival (3.5-8-1) ... 584s Setting up r-cran-r.oo (1.26.0-1) ... 584s Setting up r-cran-future (1.33.1+dfsg-1) ... 584s Setting up r-cran-forcats (1.0.0-1) ... 584s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 584s Setting up texlive-bibtex-extra (2023.20240207-1) ... 584s Setting up r-cran-reshape2 (1.4.4-2build1) ... 584s Setting up r-cran-future.apply (1.11.1+dfsg-1) ... 584s Setting up r-cran-km.ci (0.5-6-1) ... 584s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 584s Setting up r-cran-timechange (0.3.0-1) ... 584s Setting up r-cran-gridextra (2.3-3build1) ... 584s Setting up r-cran-hms (1.1.3-1) ... 584s Setting up r-cran-scales (1.3.0-1) ... 584s Setting up r-cran-memoise (2.0.1-1) ... 584s Setting up r-cran-lava (1.7.3+dfsg-1) ... 584s Setting up r-cran-promises (1.2.1+dfsg-1) ... 584s Setting up r-cran-purrr (1.0.2-1) ... 584s Setting up r-cran-e1071 (1.7-14-1) ... 584s Setting up r-cran-gridtext (0.1.5-2) ... 584s Setting up r-cran-htmltools (0.5.7-1) ... 584s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 584s Setting up r-bioc-xvector (0.42.0-1) ... 584s Setting up r-cran-pkgbuild (1.4.3-1) ... 584s Setting up r-cran-hardhat (1.3.1+dfsg-1) ... 584s Setting up r-cran-sass (0.4.8+dfsg-1) ... 584s Setting up r-cran-dplyr (1.1.4-1) ... 584s Setting up r-cran-progress (1.2.3-1) ... 584s Setting up r-cran-lubridate (1.9.3+dfsg-1) ... 584s Setting up r-cran-pkgload (1.3.4-1) ... 584s Setting up r-cran-r.utils (2.12.3-1) ... 584s Setting up r-cran-vroom (1.6.5-1) ... 584s Setting up r-cran-prodlim (2023.08.28-1) ... 584s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 584s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 584s Setting up r-cran-ggsignif (0.6.4-1) ... 584s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 584s Setting up r-cran-cellranger (1.1.0-3) ... 584s Setting up r-cran-ggtext (0.1.2-1) ... 584s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 584s Setting up r-cran-survmisc (0.5.6-1) ... 584s Setting up r-cran-rematch2 (2.1.2-2build1) ... 584s Setting up r-cran-rpart (4.1.23-1) ... 584s Setting up r-cran-fontawesome (0.5.2-1) ... 584s Setting up r-cran-ggsci (3.0.1-1) ... 584s Setting up r-cran-ipred (0.9-14-1) ... 584s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 584s Setting up r-cran-upsetr (1.4.0+dfsg-2) ... 584s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 584s Setting up r-cran-readr (2.1.5-1) ... 584s Setting up r-cran-waldo (0.5.2-1build1) ... 584s Setting up r-cran-ggrepel (0.9.5-1) ... 584s Setting up r-cran-tidyr (1.3.1-1) ... 584s Setting up r-cran-recipes (1.0.9+dfsg-1) ... 584s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 584s Setting up r-cran-r.cache (0.16.0-1) ... 584s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 584s Setting up r-bioc-hdf5array (1.30.1-1) ... 584s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 584s Setting up r-cran-readxl (1.4.3-1) ... 584s Setting up r-cran-haven (2.5.4-1) ... 584s Setting up r-cran-caret (6.0-94+dfsg-1) ... 584s Setting up r-bioc-multiassayexperiment (1.28.0+dfsg-1) ... 584s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 584s Setting up r-cran-testthat (3.2.1-1) ... 584s Setting up r-cran-broom (1.0.5+dfsg-1) ... 584s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 584s Setting up r-cran-conquer (1.3.3-1) ... 584s Setting up r-cran-r.rsp (0.46.0+ds-1) ... 584s Setting up r-cran-bookdown (0.37+dfsg-1) ... 584s Setting up r-cran-rio (1.0.1-1) ... 584s Setting up r-cran-nloptr (2.0.3-1) ... 584s Setting up r-cran-quantreg (5.97-1) ... 584s Setting up r-cran-lme4 (1.1-35.1-4) ... 584s Setting up r-cran-pbkrtest (0.5.2-2) ... 584s Setting up r-cran-car (3.1-2-2) ... 584s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 584s Setting up r-cran-rstatix (0.7.2-1) ... 584s Setting up r-cran-ggpubr (0.6.0-1) ... 584s Setting up r-cran-survminer (0.4.9+dfsg-1) ... 584s Processing triggers for libc-bin (2.39-0ubuntu2) ... 584s Processing triggers for man-db (2.12.0-3) ... 585s Processing triggers for install-info (7.1-3) ... 585s Processing triggers for tex-common (6.18) ... 586s Running updmap-sys. This may take some time... done. 586s Running mktexlsr /var/lib/texmf ... done. 586s Building format(s) --all. 615s This may take some time... done. 620s Reading package lists... 620s Building dependency tree... 620s Reading state information... 621s Starting pkgProblemResolver with broken count: 0 621s Starting 2 pkgProblemResolver with broken count: 0 621s Done 621s The following NEW packages will be installed: 621s autopkgtest-satdep 621s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 621s Need to get 0 B/696 B of archives. 621s After this operation, 0 B of additional disk space will be used. 621s Get:1 /tmp/autopkgtest.XAHG3Y/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 621s Selecting previously unselected package autopkgtest-satdep. 621s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 112317 files and directories currently installed.) 621s Preparing to unpack .../2-autopkgtest-satdep.deb ... 621s Unpacking autopkgtest-satdep (0) ... 621s Setting up autopkgtest-satdep (0) ... 623s (Reading database ... 112317 files and directories currently installed.) 623s Removing autopkgtest-satdep (0) ... 623s autopkgtest [03:27:47]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 623s autopkgtest [03:27:47]: test pkg-r-autopkgtest: [----------------------- 623s Test: Try to load the R library MultiAssayExperiment 623s 623s R version 4.3.2 (2023-10-31) -- "Eye Holes" 623s Copyright (C) 2023 The R Foundation for Statistical Computing 623s Platform: x86_64-pc-linux-gnu (64-bit) 623s 623s R is free software and comes with ABSOLUTELY NO WARRANTY. 623s You are welcome to redistribute it under certain conditions. 623s Type 'license()' or 'licence()' for distribution details. 623s 623s R is a collaborative project with many contributors. 623s Type 'contributors()' for more information and 623s 'citation()' on how to cite R or R packages in publications. 623s 623s Type 'demo()' for some demos, 'help()' for on-line help, or 623s 'help.start()' for an HTML browser interface to help. 623s Type 'q()' to quit R. 623s 623s > library('MultiAssayExperiment') 623s Loading required package: SummarizedExperiment 623s Loading required package: MatrixGenerics 623s Loading required package: matrixStats 623s 623s Attaching package: ‘MatrixGenerics’ 623s 623s The following objects are masked from ‘package:matrixStats’: 623s 623s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 623s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 623s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 623s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 623s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 623s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 623s colWeightedMeans, colWeightedMedians, colWeightedSds, 623s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 623s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 623s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 623s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 623s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 623s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 623s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 623s rowWeightedSds, rowWeightedVars 623s 623s Loading required package: GenomicRanges 623s Loading required package: stats4 624s Loading required package: BiocGenerics 624s 624s Attaching package: ‘BiocGenerics’ 624s 624s The following objects are masked from ‘package:stats’: 624s 624s IQR, mad, sd, var, xtabs 624s 624s The following objects are masked from ‘package:base’: 624s 624s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 624s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 624s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 624s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 624s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 624s table, tapply, union, unique, unsplit, which.max, which.min 624s 624s Loading required package: S4Vectors 624s 624s Attaching package: ‘S4Vectors’ 624s 624s The following object is masked from ‘package:utils’: 624s 624s findMatches 624s 624s The following objects are masked from ‘package:base’: 624s 624s expand.grid, I, unname 624s 624s Loading required package: IRanges 625s Loading required package: GenomeInfoDb 625s Loading required package: Biobase 626s Welcome to Bioconductor 626s 626s Vignettes contain introductory material; view with 626s 'browseVignettes()'. To cite Bioconductor, see 626s 'citation("Biobase")', and for packages 'citation("pkgname")'. 626s 626s 626s Attaching package: ‘Biobase’ 626s 626s The following object is masked from ‘package:MatrixGenerics’: 626s 626s rowMedians 626s 626s The following objects are masked from ‘package:matrixStats’: 626s 626s anyMissing, rowMedians 626s 629s > 629s > 629s Other tests are currently unsupported! 629s They will be progressively added. 629s autopkgtest [03:27:53]: test pkg-r-autopkgtest: -----------------------] 630s pkg-r-autopkgtest PASS 630s autopkgtest [03:27:54]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 630s autopkgtest [03:27:54]: @@@@@@@@@@@@@@@@@@@@ summary 630s pkg-r-autopkgtest PASS 642s Creating nova instance adt-noble-i386-r-bioc-multiassayexperiment-20240322-031724-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240321.img (UUID 6f9effbc-61d8-4d0a-a7e9-883547f42ac1)...