0s autopkgtest [01:10:17]: starting date and time: 2024-03-22 01:10:17+0000 0s autopkgtest [01:10:17]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [01:10:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.pdu287d_/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base --apt-upgrade r-bioc-biocbaseutils --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-77.secgroup --name adt-noble-i386-r-bioc-biocbaseutils-20240322-011017-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 587s Creating nova instance adt-noble-i386-r-bioc-biocbaseutils-20240322-011017-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240321.img (UUID 6f9effbc-61d8-4d0a-a7e9-883547f42ac1)... 587s nova boot failed (attempt #1): 587s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader') 587s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader') 587s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken') 587s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth') 587s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token') 587s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP') 587s DEBUG (session:517) REQ: curl -g -i -X GET https://keystone.ps5.canonical.com:5000/v3 -H "Accept: application/json" -H "User-Agent: nova keystoneauth1/4.0.0 python-requests/2.22.0 CPython/3.8.10" 587s DEBUG (connectionpool:962) Starting new HTTPS connection (1): keystone.ps5.canonical.com:5000 587s DEBUG (connectionpool:429) https://keystone.ps5.canonical.com:5000 "GET /v3 HTTP/1.1" 200 267 587s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 267 Content-Type: application/json Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=5, max=100 Server: Apache/2.4.41 (Ubuntu) Vary: X-Auth-Token x-openstack-request-id: req-75ed0511-46b6-4bbb-98a1-b1bcdfe82817 587s DEBUG (session:580) RESP BODY: {"version": {"id": "v3.14", "status": "stable", "updated": "2020-04-07T00:00:00Z", "links": [{"rel": "self", "href": "https://keystone.ps5.canonical.com:5000/v3/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.identity-v3+json"}]}} 587s DEBUG (session:946) GET call to https://keystone.ps5.canonical.com:5000/v3 used request id req-75ed0511-46b6-4bbb-98a1-b1bcdfe82817 587s DEBUG (base:182) Making authentication request to https://keystone.ps5.canonical.com:5000/v3/auth/tokens 587s DEBUG (connectionpool:429) https://keystone.ps5.canonical.com:5000 "POST /v3/auth/tokens HTTP/1.1" 201 11701 587s DEBUG (base:187) {"token": {"methods": ["password"], "user": {"domain": {"id": "default", "name": "Default"}, "id": "c01f0e5a065246f2a090a7d191029fce", "name": "prod-proposed-migration", "password_expires_at": null}, "audit_ids": ["LL8sLwwNQNimsLaqt8_84A"], "expires_at": "2024-03-23T01:14:13.000000Z", "issued_at": "2024-03-22T01:14:13.000000Z", "project": {"domain": {"id": "default", "name": "Default"}, "id": "a77cf7d04cc348e3b9aad5180306c3dd", "name": "prod-proposed-migration_project"}, "is_domain": false, "roles": [{"id": "f84069c3d10e4eebaea55b7499d804ac", "name": "reader"}, {"id": "3c78c6ccb7a24b77a91e24246ff0896e", "name": "member"}], "is_admin_project": false, "catalog": [{"endpoints": [{"id": "381f92a8b48942dfbfdf1f2569df8e5a", "interface": "internal", "region_id": "prodstack5", "url": "https://heat-internal.ps5.canonical.com:8004/v1/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "57c801b8efae427bb38d127888ec39c7", "interface": "admin", "region_id": "prodstack5", "url": "https://heat-admin.ps5.canonical.com:8004/v1/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "edae1b88012c46b892b6ca4d670e78e6", "interface": "public", "region_id": "prodstack5", "url": "https://heat.ps5.canonical.com:8004/v1/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "0c32215c880f45ebb55fa813d2c01a05", "type": "orchestration", "name": "heat"}, {"endpoints": [{"id": "3f327f9d25044e4dae537bc2aa694117", "interface": "internal", "region_id": "prodstack5", "url": "https://cinder-internal.ps5.canonical.com:8776/v3/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "be9b6d7a63fd4c2cbec3d3945d67da23", "interface": "admin", "region_id": "prodstack5", "url": "https://cinder-admin.ps5.canonical.com:8776/v3/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "f79fd684be71400084dd1871bf1ceed8", "interface": "public", "region_id": "prodstack5", "url": "https://cinder.ps5.canonical.com:8776/v3/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "0c799399b02f4d468844fac80cf78763", "type": "volumev3", "name": "cinderv3"}, {"endpoints": [{"id": "32d4ab1d59314991b616622f958c55a3", "interface": "admin", "region_id": "prodstack5", "url": "https://glance-admin.ps5.canonical.com:9292", "region": "prodstack5"}, {"id": "c0023fe925774a949a611bafa775b1dd", "interface": "public", "region_id": "prodstack5", "url": "https://glance.ps5.canonical.com:9292", "region": "prodstack5"}, {"id": "efdeffa94ac54e8485318b673fe00a62", "interface": "internal", "region_id": "prodstack5", "url": "https://glance-internal.ps5.canonical.com:9292", "region": "prodstack5"}], "id": "12a1596e978446df9f49adedf0281be4", "type": "image", "name": "glance"}, {"endpoints": [{"id": "35a1da84ece8457796097bbb42a7c48b", "interface": "public", "region_id": "prodstack5", "url": "https://neutron.ps5.canonical.com:9696", "region": "prodstack5"}, {"id": "76f58d33070d4716b6ace61da0cf5fab", "interface": "internal", "region_id": "prodstack5", "url": "https://neutron-internal.ps5.canonical.com:9696", "region": "prodstack5"}, {"id": "fa63ae5cd82345128c1e06d795bd5c5c", "interface": "admin", "region_id": "prodstack5", "url": "https://neutron-admin.ps5.canonical.com:9696", "region": "prodstack5"}], "id": "166ad5679b9e4430b00903524f1aa2e2", "type": "network", "name": "neutron"}, {"endpoints": [{"id": "51b3369f6bcb44d39d927fed38dfcb1d", "interface": "public", "region_id": "prodstack5", "url": "https://nova.ps5.canonical.com:8774/v2.1", "region": "prodstack5"}, {"id": "bde75440fd044085a599523fa768b3e0", "interface": "internal", "region_id": "prodstack5", "url": "https://nova-internal.ps5.canonical.com:8774/v2.1", "region": "prodstack5"}, {"id": "ebb570ffacb64d188008169beff10c7d", "interface": "admin", "region_id": "prodstack5", "url": "https://nova-admin.ps5.canonical.com:8774/v2.1", "region": "prodstack5"}], "id": "239a7e347ea145ba8900922319abfe0c", "type": "compute", "name": "nova"}, {"endpoints": [{"id": "7bc0cff06df9462eadc8f751b17b147b", "interface": "internal", "region_id": "prodstack5", "url": "https://gnocchi-internal.ps5.canonical.com:8041", "region": "prodstack5"}, {"id": "9eccd9a5774b450685f5be93e03eb579", "interface": "admin", "region_id": "prodstack5", "url": "https://gnocchi-admin.ps5.canonical.com:8041", "region": "prodstack5"}, {"id": "b116265ff15d46449f063572137c127e", "interface": "public", "region_id": "prodstack5", "url": "https://gnocchi.ps5.canonical.com:8041", "region": "prodstack5"}], "id": "3094700472a043d9a9095409791d1ebd", "type": "metric", "name": "gnocchi"}, {"endpoints": [{"id": "8ee6d1af15c5497393f87dadb8d88dc0", "interface": "public", "region_id": "prodstack5", "url": "https://octavia.ps5.canonical.com:9876", "region": "prodstack5"}, {"id": "d1ebffaac581458fbfe417de21f6179e", "interface": "internal", "region_id": "prodstack5", "url": "https://octavia-internal.ps5.canonical.com:9876", "region": "prodstack5"}, {"id": "fe6854cc50864b7e8884c666d0c49525", "interface": "admin", "region_id": "prodstack5", "url": "https://octavia-admin.ps5.canonical.com:9876", "region": "prodstack5"}], "id": "31368cb36db84561bd587221566417fe", "type": "load-balancer", "name": "octavia"}, {"endpoints": [{"id": "04c6279eb3274a8b9558481fcb84f91f", "interface": "admin", "region_id": "prodstack5", "url": "https://radosgw-admin.ps5.canonical.com:443/", "region": "prodstack5"}, {"id": "4078713c5b4e42af9af5181b0e370195", "interface": "public", "region_id": "prodstack5", "url": "https://radosgw.ps5.canonical.com:443/", "region": "prodstack5"}, {"id": "539afbfe83284d1794337ab29534d146", "interface": "internal", "region_id": "prodstack5", "url": "https://radosgw-internal.ps5.canonical.com:443/", "region": "prodstack5"}], "id": "33fe254c9ab3464f9cefb0735db5c7b6", "type": "s3", "name": "s3"}, {"endpoints": [{"id": "0e87b83617064bf4a310ac3b19bbb6d3", "interface": "admin", "region_id": "prodstack5", "url": "https://barbican-admin.ps5.canonical.com:9312", "region": "prodstack5"}, {"id": "11763e77618146d29b12e08749f72ebe", "interface": "public", "region_id": "prodstack5", "url": "https://barbican.ps5.canonical.com:9311", "region": "prodstack5"}, {"id": "c028b0aad7e64fc181028c5e580410ca", "interface": "internal", "region_id": "prodstack5", "url": "https://barbican-internal.ps5.canonical.com:9311", "region": "prodstack5"}], "id": "4a5b6290ebc64737b2ce1d680622c9b0", "type": "key-manager", "name": "barbican"}, {"endpoints": [{"id": "3e668beb71f6455d89614720578fb48e", "interface": "public", "region_id": "prodstack5", "url": "https://designate.ps5.canonical.com:9001", "region": "prodstack5"}, {"id": "4819d3baf6fe4074b00d4dbce532acc4", "interface": "admin", "region_id": "prodstack5", "url": "https://designate-admin.ps5.canonical.com:9001", "region": "prodstack5"}, {"id": "b40c9ffe39c64e5ca19cc2b1f3c74499", "interface": "internal", "region_id": "prodstack5", "url": "https://designate-internal.ps5.canonical.com:9001", "region": "prodstack5"}], "id": "4f3473e2e5994fee8132b0e6b5b96b10", "type": "dns", "name": "designate"}, {"endpoints": [{"id": "135a559d49ac4e308f9ba622ab4eea39", "interface": "admin", "region_id": "prodstack5", "url": "https://radosgw-admin.ps5.canonical.com:443/swift", "region": "prodstack5"}, {"id": "dbcd5cb805df4ab789e586b2d37cfebb", "interface": "public", "region_id": "prodstack5", "url": "https://radosgw.ps5.canonical.com:443/swift/v1/AUTH_a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "e313670eb03d431298eb0c604ebc0e5a", "interface": "internal", "region_id": "prodstack5", "url": "https://radosgw-internal.ps5.canonical.com:443/swift/v1/AUTH_a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "7066b013a1bf45ea88db389a412e7e0a", "type": "object-store", "name": "swift"}, {"endpoints": [{"id": "1f02cd17eafd4c6898ba27eef5c27551", "interface": "admin", "region_id": "prodstack5", "url": "https://placement-admin.ps5.canonical.com:8778", "region": "prodstack5"}, {"id": "4eae3072a321488f9ff8514f0b4f9d23", "interface": "public", "region_id": "prodstack5", "url": "https://placement.ps5.canonical.com:8778", "region": "prodstack5"}, {"id": "7df5a1a986ad42258d3d2006d28a5658", "interface": "internal", "region_id": "prodstack5", "url": "https://placement-internal.ps5.canonical.com:8778", "region": "prodstack5"}], "id": "85421f66b1804c6298c7a5db84b753a2", "type": "placement", "name": "placement"}, {"endpoints": [{"id": "30c12456f82b43d0b7b3b9b38ee6b98d", "interface": "admin", "region_id": "prodstack5", "url": "https://keystone-admin.ps5.canonical.com:35357/v3", "region": "prodstack5"}, {"id": "8affc90f95f54139ac786bac07c69664", "interface": "public", "region_id": "prodstack5", "url": "https://keystone.ps5.canonical.com:5000/v3", "region": "prodstack5"}, {"id": "be617e6c3fa442258fb5e88d9f29f498", "interface": "internal", "region_id": "prodstack5", "url": "https://keystone-internal.ps5.canonical.com:5000/v3", "region": "prodstack5"}], "id": "9cedc56a694848cca451e602ba3d3546", "type": "identity", "name": "keystone"}, {"endpoints": [{"id": "b141a016f502463f929fc43e1204af09", "interface": "admin", "region_id": "prodstack5", "url": "https://radosgw-admin.ps5.canonical.com:443/swift", "region": "prodstack5"}, {"id": "c87abc0d0d4040f690f29523f449b40b", "interface": "public", "region_id": "prodstack5", "url": "https://radosgw.ps5.canonical.com:443/swift/v1/AUTH_6dd669096f9045e28e7895ef3e130559/simplestreams/data/", "region": "prodstack5"}, {"id": "dbf5c3b539c64cf78fef488590bf537e", "interface": "internal", "region_id": "prodstack5", "url": "https://radosgw-internal.ps5.canonical.com:443/swift/v1/AUTH_6dd669096f9045e28e7895ef3e130559/simplestreams/data/", "region": "prodstack5"}], "id": "a65e443f46b64434b1f926d1726653d5", "type": "product-streams", "name": "image-stream"}, {"endpoints": [{"id": "99d93600c5a44bc2a1ed77537833df85", "interface": "public", "region_id": "prodstack5", "url": "https://heat.ps5.canonical.com:8000/v1", "region": "prodstack5"}, {"id": "d8b9ce900b4c462a9a76c0602e97f263", "interface": "internal", "region_id": "prodstack5", "url": "https://heat-internal.ps5.canonical.com:8000/v1", "region": "prodstack5"}, {"id": "e2e1febd025547ddb27708842cd059cc", "interface": "admin", "region_id": "prodstack5", "url": "https://heat-admin.ps5.canonical.com:8000/v1", "region": "prodstack5"}], "id": "c3e7bea8f4a34b7da8d6d2fdd2f32833", "type": "cloudformation", "name": "heat-cfn"}, {"endpoints": [{"id": "6292435b5b24409087de737781d5a760", "interface": "internal", "region_id": "prodstack5", "url": "https://aodh-internal.ps5.canonical.com:8042", "region": "prodstack5"}, {"id": "660cbccb033641b6ac3680c85facfec7", "interface": "public", "region_id": "prodstack5", "url": "https://aodh.ps5.canonical.com:8042", "region": "prodstack5"}, {"id": "90112245ed1f46409e701fa1c9c12194", "interface": "admin", "region_id": "prodstack5", "url": "https://aodh-admin.ps5.canonical.com:8042", "region": "prodstack5"}], "id": "c5fe16dbcbab4875a376b69e9d60762b", "type": "alarming", "name": "aodh"}, {"endpoints": [{"id": "147effd39862447690863776c948b462", "interface": "internal", "region_id": "prodstack5", "url": "https://cinder-internal.ps5.canonical.com:8776/v2/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "43c302450db34754a415aae292cf41bd", "interface": "public", "region_id": "prodstack5", "url": "https://cinder.ps5.canonical.com:8776/v2/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "5052f17402424f418e320f48665fe1ac", "interface": "admin", "region_id": "prodstack5", "url": "https://cinder-admin.ps5.canonical.com:8776/v2/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "da8a1d72b62843e1baa4ca44bd82a9d3", "type": "volumev2", "name": "cinderv2"}]}} 587s REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" 587s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" 587s DEBUG (connectionpool:962) Starting new HTTPS connection (1): nova.ps5.canonical.com:8774 587s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1 HTTP/1.1" 302 0 587s RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps5.canonical.com:8774/v2.1/ Server: Apache/2.4.41 (Ubuntu) x-compute-request-id: req-7835858f-3c2f-4488-91db-c2c5085c2078 x-openstack-request-id: req-7835858f-3c2f-4488-91db-c2c5085c2078 587s DEBUG (session:548) RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps5.canonical.com:8774/v2.1/ Server: Apache/2.4.41 (Ubuntu) x-compute-request-id: req-7835858f-3c2f-4488-91db-c2c5085c2078 x-openstack-request-id: req-7835858f-3c2f-4488-91db-c2c5085c2078 587s RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged. 587s DEBUG (session:580) RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged. 587s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/ HTTP/1.1" 200 397 587s RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-e7f3d69d-e7ee-4358-86fd-de66785ab73f x-openstack-request-id: req-e7f3d69d-e7ee-4358-86fd-de66785ab73f 587s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-e7f3d69d-e7ee-4358-86fd-de66785ab73f x-openstack-request-id: req-e7f3d69d-e7ee-4358-86fd-de66785ab73f 587s RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.87", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}} 587s DEBUG (session:580) RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.87", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}} 587s GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/ used request id req-e7f3d69d-e7ee-4358-86fd-de66785ab73f 587s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/ used request id req-e7f3d69d-e7ee-4358-86fd-de66785ab73f 587s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader') 587s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader') 587s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken') 587s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth') 587s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token') 587s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth') 587s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP') 587s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps5.canonical.com:9292/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" -H "X-OpenStack-Nova-API-Version: 2.87" 587s DEBUG (connectionpool:962) Starting new HTTPS connection (1): glance.ps5.canonical.com:9292 587s DEBUG (connectionpool:429) https://glance.ps5.canonical.com:9292 "GET /v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1 HTTP/1.1" 200 2114 587s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 2114 Content-Type: application/json Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=5, max=100 Server: Apache/2.4.41 (Ubuntu) X-Openstack-Request-Id: req-9a5e9546-e485-413c-828b-c134c2775b32 587s DEBUG (session:580) RESP BODY: {"architecture": "x86_64", "base_image_ref": "a8255c6f-27e8-4fbd-b2cb-48809d22500c", "boot_roles": "member,reader", "content_id": "auto.sync", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "6a3784f1-3e94-462d-b45c-90b8ddd16c15", "item_name": "disk1.img", "os_distro": "ubuntu", "os_version": "24.04", "owner_id": "a77cf7d04cc348e3b9aad5180306c3dd", "owner_project_name": "prod-proposed-migration_project", "owner_user_name": "prod-proposed-migration", "product_name": "com.ubuntu.cloud.daily:server:24.04:amd64", "simplestreams_metadata": "{\"aliases\": \"24.04,n,noble,devel\", \"arch\": \"amd64\", \"ftype\": \"disk1.img\", \"label\": \"daily\", \"md5\": \"7389041c488d1c996ccf0640bb16de5e\", \"os\": \"ubuntu\", \"pubname\": \"ubuntu-noble-daily-amd64-server-20240312\", \"release\": \"noble\", \"release_codename\": \"Noble Nu", "source_content_id": "com.ubuntu.cloud:daily:download", "user_id": "c01f0e5a065246f2a090a7d191029fce", "version_name": "20240312", "name": "adt/ubuntu-noble-amd64-server-20240321.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 2543845376, "virtual_size": null, "status": "active", "checksum": "fbba480b55e82d01bd693d32d7fdead6", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "a77cf7d04cc348e3b9aad5180306c3dd", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "c8728b3eec13ff3ef549329717a6ff9b10aba2208e87e2c14d54f3f65d6b5846af40ab70f67f880b4648ac9c5dce089c46d69f917eb27e86f84248dc3899a1d7", "id": "6f9effbc-61d8-4d0a-a7e9-883547f42ac1", "created_at": "2024-03-21T19:29:41Z", "updated_at": "2024-03-21T19:30:53Z", "locations": [{"url": "rbd://3d196f64-760e-11eb-b486-e7aafffac620/glance/6f9effbc-61d8-4d0a-a7e9-883547f42ac1/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://3d196f64-760e-11eb-b486-e7aafffac620/glance/6f9effbc-61d8-4d0a-a7e9-883547f42ac1/snap", "tags": [], "self": "/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1", "file": "/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1/file", "schema": "/v2/schemas/image", "stores": "ceph"} 587s DEBUG (session:936) GET call to image for https://glance.ps5.canonical.com:9292/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1 used request id req-9a5e9546-e485-413c-828b-c134c2775b32 587s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1/flavors/autopkgtest -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" -H "X-OpenStack-Nova-API-Version: 2.87" 587s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/flavors/autopkgtest HTTP/1.1" 404 84 587s DEBUG (session:548) RESP: [404] Connection: Keep-Alive Content-Length: 84 Content-Type: application/json; charset=UTF-8 Date: Fri, 22 Mar 2024 01:14:13 GMT Keep-Alive: timeout=75, max=998 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-2df1de15-23df-4efc-aae9-77a5aa2e827f x-openstack-request-id: req-2df1de15-23df-4efc-aae9-77a5aa2e827f 587s DEBUG (session:580) RESP BODY: {"itemNotFound": {"code": 404, "message": "Flavor autopkgtest could not be found."}} 587s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/flavors/autopkgtest used request id req-2df1de15-23df-4efc-aae9-77a5aa2e827f 587s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1/flavors?is_public=None -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" -H "X-OpenStack-Nova-API-Version: 2.87" 587s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/flavors?is_public=None HTTP/1.1" 200 30288 587s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 30288 Content-Type: application/json Date: Fri, 22 Mar 2024 01:14:14 GMT Keep-Alive: timeout=75, max=997 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-8b6505bd-c212-4ad7-9aae-3c9f72efd305 x-openstack-request-id: req-8b6505bd-c212-4ad7-9aae-3c9f72efd305 587s DEBUG (session:580) RESP BODY: {"flavors": [{"id": "02e9c87a-a583-4e03-9b7a-e12ac6e718de", "name": "builder-cpu16-ram32-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/02e9c87a-a583-4e03-9b7a-e12ac6e718de"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/02e9c87a-a583-4e03-9b7a-e12ac6e718de"}], "description": null}, {"id": "05985aaa-bad3-4e3e-93f8-a52755995027", "name": "builder-cpu4-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/05985aaa-bad3-4e3e-93f8-a52755995027"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/05985aaa-bad3-4e3e-93f8-a52755995027"}], "description": null}, {"id": "07ae4bac-2ce3-4dd4-8019-4a62a43d8d3f", "name": "builder-cpu32-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/07ae4bac-2ce3-4dd4-8019-4a62a43d8d3f"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/07ae4bac-2ce3-4dd4-8019-4a62a43d8d3f"}], "description": null}, {"id": "09e7dbfc-161e-47ae-a384-5cd6334b2d8b", "name": "builder-cpu2-ram12-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/09e7dbfc-161e-47ae-a384-5cd6334b2d8b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/09e7dbfc-161e-47ae-a384-5cd6334b2d8b"}], "description": null}, {"id": "0f722088-0d98-4129-8e3d-b292a0adbe44", "name": "builder-cpu4-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/0f722088-0d98-4129-8e3d-b292a0adbe44"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/0f722088-0d98-4129-8e3d-b292a0adbe44"}], "description": null}, {"id": "1319cb50-758a-4b0a-9247-17f0e3fe4211", "name": "autopkgtest", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}], "description": null}, {"id": "13d4378b-9327-4969-89a6-3c6750d93680", "name": "builder-cpu8-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/13d4378b-9327-4969-89a6-3c6750d93680"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/13d4378b-9327-4969-89a6-3c6750d93680"}], "description": null}, {"id": "140a24f9-8b65-4a0b-a95f-eeb96f38c5e9", "name": "builder-cpu8-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/140a24f9-8b65-4a0b-a95f-eeb96f38c5e9"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/140a24f9-8b65-4a0b-a95f-eeb96f38c5e9"}], "description": null}, {"id": "16cc919c-7e15-43e1-ba1e-a49fed5e3401", "name": "builder-cpu2-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/16cc919c-7e15-43e1-ba1e-a49fed5e3401"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/16cc919c-7e15-43e1-ba1e-a49fed5e3401"}], "description": null}, {"id": "18f42ccb-05c4-4d80-989b-d367dbe45ba3", "name": "builder-cpu16-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/18f42ccb-05c4-4d80-989b-d367dbe45ba3"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/18f42ccb-05c4-4d80-989b-d367dbe45ba3"}], "description": null}, {"id": "1bdf7801-90e7-4c6a-9ccc-0930a31ca27b", "name": "builder-cpu16-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1bdf7801-90e7-4c6a-9ccc-0930a31ca27b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1bdf7801-90e7-4c6a-9ccc-0930a31ca27b"}], "description": null}, {"id": "1c18fadc-0f9b-4c9f-9595-8a74af82a72b", "name": "builder-cpu2-ram12-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1c18fadc-0f9b-4c9f-9595-8a74af82a72b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1c18fadc-0f9b-4c9f-9595-8a74af82a72b"}], "description": null}, {"id": "1e731fe2-ffd3-4c27-b149-e102eccfe052", "name": "builder-cpu8-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1e731fe2-ffd3-4c27-b149-e102eccfe052"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1e731fe2-ffd3-4c27-b149-e102eccfe052"}], "description": null}, {"id": "1f730b22-ac7a-4474-8ea5-09db60e42555", "name": "builder-cpu2-ram64-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1f730b22-ac7a-4474-8ea5-09db60e42555"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1f730b22-ac7a-4474-8ea5-09db60e42555"}], "description": null}, {"id": "25e742fd-7fed-43b3-9f3b-0258bb5053a0", "name": "builder-cpu32-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/25e742fd-7fed-43b3-9f3b-0258bb5053a0"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/25e742fd-7fed-43b3-9f3b-0258bb5053a0"}], "description": null}, {"id": "26b00ebd-f8ed-48ea-9ef2-88700638dc7b", "name": "builder-cpu32-ram32-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/26b00ebd-f8ed-48ea-9ef2-88700638dc7b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/26b00ebd-f8ed-48ea-9ef2-88700638dc7b"}], "description": null}, {"id": "2784156e-2387-494d-b64a-8ef8110b7b63", "name": "builder-cpu16-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/2784156e-2387-494d-b64a-8ef8110b7b63"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/2784156e-2387-494d-b64a-8ef8110b7b63"}], "description": null}, {"id": "28d0b426-6a41-45bf-ae80-a72fa286ae63", "name": "builder-cpu32-ram4-disk50", "links": [{"rel": "self", "href": 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"https://nova.ps5.canonical.com:8774/v2.1/flavors/bae423a2-460e-4fde-9931-6581734630f2"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bae423a2-460e-4fde-9931-6581734630f2"}], "description": null}, {"id": "bafb2a25-adf3-4c23-a2f2-bb93a7b322b5", "name": "builder-cpu8-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bafb2a25-adf3-4c23-a2f2-bb93a7b322b5"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bafb2a25-adf3-4c23-a2f2-bb93a7b322b5"}], "description": null}, {"id": "bc52d8c5-6267-4511-9ebb-968668f69b03", "name": "builder-cpu2-ram4-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bc52d8c5-6267-4511-9ebb-968668f69b03"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bc52d8c5-6267-4511-9ebb-968668f69b03"}], "description": null}, {"id": "bd3f2eeb-b0fc-49d5-9bf0-b116d353fe59", "name": "builder-cpu4-ram32-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bd3f2eeb-b0fc-49d5-9bf0-b116d353fe59"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bd3f2eeb-b0fc-49d5-9bf0-b116d353fe59"}], "description": null}, {"id": "bf774e98-a708-4015-aadd-a9d75e2e577e", "name": "builder-cpu8-ram64-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bf774e98-a708-4015-aadd-a9d75e2e577e"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bf774e98-a708-4015-aadd-a9d75e2e577e"}], "description": null}, {"id": "c8f31bd5-d40f-4ef0-8ad3-a378cc79be33", "name": "builder-cpu32-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/c8f31bd5-d40f-4ef0-8ad3-a378cc79be33"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/c8f31bd5-d40f-4ef0-8ad3-a378cc79be33"}], "description": null}, {"id": "c9a40e1b-3e3a-4b2b-9cb5-a8dcf3d277fd", "name": "builder-cpu4-ram4-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/c9a40e1b-3e3a-4b2b-9cb5-a8dcf3d277fd"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/c9a40e1b-3e3a-4b2b-9cb5-a8dcf3d277fd"}], "description": null}, {"id": "c9ccd7cb-7dc2-4c64-99fc-768fc34aea33", "name": "builder-cpu16-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/c9ccd7cb-7dc2-4c64-99fc-768fc34aea33"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/c9ccd7cb-7dc2-4c64-99fc-768fc34aea33"}], "description": null}, {"id": "ca65745f-04cc-4a79-b5d3-850d87ada100", "name": "builder-cpu2-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/ca65745f-04cc-4a79-b5d3-850d87ada100"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/ca65745f-04cc-4a79-b5d3-850d87ada100"}], "description": null}, {"id": "ca7d8fd5-7032-42fd-816d-e7b56688408b", "name": "builder-cpu2-ram44-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/ca7d8fd5-7032-42fd-816d-e7b56688408b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/ca7d8fd5-7032-42fd-816d-e7b56688408b"}], "description": null}, {"id": "cc26157f-ed37-4dbd-abeb-1a460e5a3f89", "name": "builder-cpu2-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/cc26157f-ed37-4dbd-abeb-1a460e5a3f89"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/cc26157f-ed37-4dbd-abeb-1a460e5a3f89"}], "description": null}, {"id": "d1775bcf-3942-484b-92ff-f9c22cd4f971", "name": "builder-cpu2-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d1775bcf-3942-484b-92ff-f9c22cd4f971"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d1775bcf-3942-484b-92ff-f9c22cd4f971"}], "description": null}, {"id": "d83654b5-3a0f-47c4-9378-96534bc9d174", "name": "builder-cpu96-ram192-disk1000", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d83654b5-3a0f-47c4-9378-96534bc9d174"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d83654b5-3a0f-47c4-9378-96534bc9d174"}], "description": null}, {"id": "d8a4fd7d-9017-415f-9528-834277c9fedd", "name": "builder-cpu4-ram8-disk120", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d8a4fd7d-9017-415f-9528-834277c9fedd"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d8a4fd7d-9017-415f-9528-834277c9fedd"}], "description": null}, {"id": "d986a066-2af9-42cb-842a-1be8f588cfb1", "name": "builder-cpu2-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d986a066-2af9-42cb-842a-1be8f588cfb1"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d986a066-2af9-42cb-842a-1be8f588cfb1"}], "description": null}, {"id": "dd88672e-3c9b-48eb-b589-c710e92a3fcb", "name": "builder-cpu4-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/dd88672e-3c9b-48eb-b589-c710e92a3fcb"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/dd88672e-3c9b-48eb-b589-c710e92a3fcb"}], "description": null}, {"id": "dfa06abe-39ce-41b0-9309-79f3d3d12499", "name": "builder-cpu2-ram32-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/dfa06abe-39ce-41b0-9309-79f3d3d12499"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/dfa06abe-39ce-41b0-9309-79f3d3d12499"}], "description": null}, {"id": "e8da3984-1a76-4bb0-a502-48c4dc862979", "name": "builder-cpu4-ram32-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/e8da3984-1a76-4bb0-a502-48c4dc862979"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/e8da3984-1a76-4bb0-a502-48c4dc862979"}], "description": null}, {"id": "ecbfad98-f8ab-4fee-9978-ba5f2516b36c", "name": "builder-cpu4-ram16-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/ecbfad98-f8ab-4fee-9978-ba5f2516b36c"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/ecbfad98-f8ab-4fee-9978-ba5f2516b36c"}], "description": null}, {"id": "f14866bd-022b-43f8-996d-71cb0d89f87a", "name": "builder-cpu4-ram8-disk200", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f14866bd-022b-43f8-996d-71cb0d89f87a"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f14866bd-022b-43f8-996d-71cb0d89f87a"}], "description": null}, {"id": "f1ed6577-17da-4b4e-afc4-f9d7b9672cc5", "name": "builder-cpu2-ram12-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f1ed6577-17da-4b4e-afc4-f9d7b9672cc5"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f1ed6577-17da-4b4e-afc4-f9d7b9672cc5"}], "description": null}, {"id": "f2c24289-7055-4ca7-af16-a18d711558e9", "name": "builder-cpu8-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f2c24289-7055-4ca7-af16-a18d711558e9"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f2c24289-7055-4ca7-af16-a18d711558e9"}], "description": null}, {"id": "f431c620-abda-4a04-b4b1-c6699fdac063", "name": "builder-cpu2-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f431c620-abda-4a04-b4b1-c6699fdac063"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f431c620-abda-4a04-b4b1-c6699fdac063"}], "description": null}]} 587s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/flavors?is_public=None used request id req-8b6505bd-c212-4ad7-9aae-3c9f72efd305 587s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" -H "X-OpenStack-Nova-API-Version: 2.87" 587s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211 HTTP/1.1" 200 607 587s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 607 Content-Type: application/json Date: Fri, 22 Mar 2024 01:14:14 GMT Keep-Alive: timeout=75, max=996 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-d851acc6-805b-4e86-88b7-8c98bd3f3980 x-openstack-request-id: req-d851acc6-805b-4e86-88b7-8c98bd3f3980 587s DEBUG (session:580) RESP BODY: {"flavor": {"id": "1319cb50-758a-4b0a-9247-17f0e3fe4211", "name": "autopkgtest", "ram": 4096, "disk": 20, "swap": 0, "OS-FLV-EXT-DATA:ephemeral": 0, "OS-FLV-DISABLED:disabled": false, "vcpus": 2, "os-flavor-access:is_public": false, "rxtx_factor": 1.0, "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}], "description": null, "extra_specs": {"aggregate_instance_extra_specs:commit": "builder", "hw_rng:allowed": "True"}}} 587s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211 used request id req-d851acc6-805b-4e86-88b7-8c98bd3f3980 587s DEBUG (session:517) REQ: curl -g -i -X POST https://nova.ps5.canonical.com:8774/v2.1/servers -H "Accept: application/json" -H "Content-Type: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}6fba6139c8b8c26912c6dd503a30705408d8650e80d3842ef5882def93152210" -H "X-OpenStack-Nova-API-Version: 2.87" -d '{"server": {"name": "adt-noble-i386-r-bioc-biocbaseutils-20240322-011017-juju-7f2275-prod-proposed-migration-environment-2", "imageRef": "6f9effbc-61d8-4d0a-a7e9-883547f42ac1", "flavorRef": "1319cb50-758a-4b0a-9247-17f0e3fe4211", "user_data": "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", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-2", "min_count": 1, "max_count": 1, "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-77.secgroup"}], "networks": [{"uuid": "0d0997a0-13bd-484c-b3b7-ebb3288d6a74"}]}}' 587s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "POST /v2.1/servers HTTP/1.1" 403 115 587s DEBUG (session:548) RESP: [403] Connection: Keep-Alive Content-Length: 115 Content-Type: application/json; charset=UTF-8 Date: Fri, 22 Mar 2024 01:14:14 GMT Keep-Alive: timeout=75, max=995 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-43736ba9-354a-47af-b4d1-812c79418b9d x-openstack-request-id: req-43736ba9-354a-47af-b4d1-812c79418b9d 587s DEBUG (session:580) RESP BODY: {"forbidden": {"code": 403, "message": "Quota exceeded for cores: Requested 2, but already used 300 of 300 cores"}} 587s DEBUG (session:936) POST call to compute for https://nova.ps5.canonical.com:8774/v2.1/servers used request id req-43736ba9-354a-47af-b4d1-812c79418b9d 587s DEBUG (shell:822) Quota exceeded for cores: Requested 2, but already used 300 of 300 cores (HTTP 403) (Request-ID: req-43736ba9-354a-47af-b4d1-812c79418b9d) 587s Traceback (most recent call last): 587s File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 820, in main 587s OpenStackComputeShell().main(argv) 587s File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 742, in main 587s args.func(self.cs, args) 587s File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 971, in do_boot 587s server = cs.servers.create(*boot_args, **boot_kwargs) 587s File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 1477, in create 587s return self._boot(response_key, *boot_args, **boot_kwargs) 587s File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 836, in _boot 587s return self._create('/servers', body, response_key, 587s File "/usr/lib/python3/dist-packages/novaclient/base.py", line 363, in _create 587s resp, body = self.api.client.post(url, body=body) 587s File "/usr/lib/python3/dist-packages/keystoneauth1/adapter.py", line 392, in post 587s return self.request(url, 'POST', **kwargs) 587s File "/usr/lib/python3/dist-packages/novaclient/client.py", line 78, in request 587s raise exceptions.from_response(resp, body, url, method) 587s novaclient.exceptions.Forbidden: Quota exceeded for cores: Requested 2, but already used 300 of 300 cores (HTTP 403) (Request-ID: req-43736ba9-354a-47af-b4d1-812c79418b9d) 587s ERROR (Forbidden): Quota exceeded for cores: Requested 2, but already used 300 of 300 cores (HTTP 403) (Request-ID: req-43736ba9-354a-47af-b4d1-812c79418b9d) 588s autopkgtest [01:20:05]: testbed dpkg architecture: amd64 588s autopkgtest [01:20:05]: testbed apt version: 2.7.12 588s autopkgtest [01:20:05]: test architecture: i386 588s autopkgtest [01:20:05]: @@@@@@@@@@@@@@@@@@@@ test bed setup 588s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 589s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3765 kB] 589s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 589s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 589s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 589s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [703 kB] 589s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [467 kB] 589s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 589s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 589s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 589s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 589s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1271 kB] 589s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 589s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 589s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 589s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 589s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 592s Fetched 11.3 MB in 1s (7605 kB/s) 592s Reading package lists... 594s Reading package lists... 594s Building dependency tree... 594s Reading state information... 594s Calculating upgrade... 595s The following packages will be upgraded: 595s cloud-init fonts-ubuntu-console python3-markupsafe 595s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 595s Need to get 629 kB of archives. 595s After this operation, 11.3 kB disk space will be freed. 595s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 595s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 python3-markupsafe amd64 2.1.5-1build1 [12.6 kB] 595s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 cloud-init all 24.1.2-0ubuntu1 [597 kB] 595s Preconfiguring packages ... 595s Fetched 629 kB in 0s (7402 kB/s) 595s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 595s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 595s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 595s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_amd64.deb ... 595s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 595s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 596s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 596s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 596s Setting up cloud-init (24.1.2-0ubuntu1) ... 597s Setting up python3-markupsafe (2.1.5-1build1) ... 597s Processing triggers for man-db (2.12.0-3) ... 598s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 598s Reading package lists... 598s Building dependency tree... 598s Reading state information... 598s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 599s sh: Attempting to set up Debian/Ubuntu apt sources automatically 599s sh: Distribution appears to be Ubuntu 600s Reading package lists... 600s Building dependency tree... 600s Reading state information... 600s eatmydata is already the newest version (131-1). 600s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 600s Reading package lists... 601s Building dependency tree... 601s Reading state information... 601s dbus is already the newest version (1.14.10-4ubuntu1). 601s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 601s Reading package lists... 601s Building dependency tree... 601s Reading state information... 601s rng-tools-debian is already the newest version (2.4). 601s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 601s Reading package lists... 602s Building dependency tree... 602s Reading state information... 602s The following packages will be REMOVED: 602s cloud-init* python3-configobj* python3-debconf* 602s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 602s After this operation, 3256 kB disk space will be freed. 602s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 602s Removing cloud-init (24.1.2-0ubuntu1) ... 603s Removing python3-configobj (5.0.8-3) ... 603s Removing python3-debconf (1.5.86) ... 603s Processing triggers for man-db (2.12.0-3) ... 603s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 603s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 604s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 604s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 604s invoke-rc.d: policy-rc.d denied execution of try-restart. 604s Reading package lists... 604s Building dependency tree... 604s Reading state information... 605s linux-generic is already the newest version (6.8.0-11.11+1). 605s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 605s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 605s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 605s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 607s Reading package lists... 607s Reading package lists... 607s Building dependency tree... 607s Reading state information... 607s Calculating upgrade... 608s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 608s Reading package lists... 608s Building dependency tree... 608s Reading state information... 608s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 608s autopkgtest [01:20:25]: rebooting testbed after setup commands that affected boot 629s autopkgtest [01:20:46]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 630s autopkgtest [01:20:47]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-biocbaseutils 631s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-biocbaseutils 1.4.0+dfsg-1 (dsc) [2150 B] 631s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-biocbaseutils 1.4.0+dfsg-1 (tar) [7444 B] 631s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-biocbaseutils 1.4.0+dfsg-1 (diff) [4936 B] 631s gpgv: Signature made Wed Nov 29 15:16:09 2023 UTC 631s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 631s gpgv: issuer "tillea@rki.de" 631s gpgv: Can't check signature: No public key 631s dpkg-source: warning: cannot verify inline signature for ./r-bioc-biocbaseutils_1.4.0+dfsg-1.dsc: no acceptable signature found 631s autopkgtest [01:20:48]: testing package r-bioc-biocbaseutils version 1.4.0+dfsg-1 631s autopkgtest [01:20:48]: build not needed 632s autopkgtest [01:20:49]: test pkg-r-autopkgtest: preparing testbed 635s Note, using file '/tmp/autopkgtest.aYGBrh/1-autopkgtest-satdep.dsc' to get the build dependencies 635s Reading package lists... 636s Building dependency tree... 636s Reading state information... 636s Starting pkgProblemResolver with broken count: 0 636s Starting 2 pkgProblemResolver with broken count: 0 636s Done 636s The following NEW packages will be installed: 636s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 636s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 636s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 636s g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 636s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13 636s gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 636s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 636s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 636s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 636s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 636s libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 636s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 636s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 636s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 636s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 636s libjs-popper.js libjs-prettify libjs-sifter.js 636s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 636s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 636s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 636s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 636s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 636s libpotrace0 libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 libsm6 636s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 636s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 636s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 636s libxss1 libxt6 libzzip-0-13 linux-libc-dev littler node-bootstrap-sass 636s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 636s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 636s r-bioc-biocbaseutils r-bioc-biocgenerics r-bioc-biocstyle r-cran-base64enc 636s r-cran-biocmanager r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 636s r-cran-commonmark r-cran-crayon r-cran-digest r-cran-ellipsis 636s r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-glue 636s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-jquerylib r-cran-jsonlite 636s r-cran-knitr r-cran-later r-cran-lifecycle r-cran-littler r-cran-magrittr 636s r-cran-memoise r-cran-mime r-cran-pkgkitten r-cran-promises r-cran-r6 636s r-cran-rappdirs r-cran-rcpp r-cran-rlang r-cran-rmarkdown r-cran-sass 636s r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr 636s r-cran-tinytest r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun 636s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 636s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 636s xdg-utils zip zlib1g-dev 637s 0 upgraded, 205 newly installed, 0 to remove and 0 not upgraded. 637s Need to get 321 MB of archives. 637s After this operation, 1045 MB of additional disk space will be used. 637s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 637s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 637s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 637s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 637s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 637s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 637s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 637s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 637s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 637s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 637s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 637s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 637s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 637s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 637s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 637s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 637s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 637s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 637s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 637s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 637s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 637s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 637s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 637s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 637s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 637s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 637s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 637s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 637s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 637s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 637s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 637s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 637s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 637s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 637s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 637s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 637s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 637s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 637s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 637s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 637s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 637s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 637s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 637s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 637s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 637s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 637s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 637s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 637s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 637s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 637s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 637s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 javascript-common all 11+nmu1 [5936 B] 637s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 637s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 637s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 637s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 637s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 637s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 637s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 637s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 637s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 637s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 637s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 637s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 637s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 637s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 637s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 637s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 637s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 637s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 637s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 637s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 637s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 637s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 637s Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 637s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 637s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 637s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 637s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 637s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 637s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 637s Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 637s Get:83 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 637s Get:84 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 637s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 637s Get:86 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 637s Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 637s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 637s Get:89 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 637s Get:90 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 637s Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 libkpathsea6 amd64 2023.20230311.66589-9 [62.9 kB] 637s Get:92 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 637s Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 637s Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 637s Get:95 http://ftpmaster.internal/ubuntu noble/main amd64 liblua5.4-0 amd64 5.4.6-3 [166 kB] 637s Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 637s Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 637s Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 637s Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 637s Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 637s Get:101 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 637s Get:102 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 637s Get:103 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 637s Get:104 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 637s Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 637s Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 637s Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 637s Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 637s Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 637s Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 637s Get:111 http://ftpmaster.internal/ubuntu noble/universe amd64 libpotrace0 amd64 1.16-2 [17.2 kB] 637s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libptexenc1 amd64 2023.20230311.66589-9 [40.4 kB] 637s Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 637s Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 637s Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 637s Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libsynctex2 amd64 2023.20230311.66589-9 [59.5 kB] 637s Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 637s Get:118 http://ftpmaster.internal/ubuntu noble/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 637s Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 libtexlua53-5 amd64 2023.20230311.66589-9 [122 kB] 637s Get:120 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 637s Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 637s Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 637s Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 637s Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 637s Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] 637s Get:126 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 637s Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libxmu6 amd64 2:1.1.3-3 [49.6 kB] 637s Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libxpm4 amd64 1:3.5.17-1 [35.9 kB] 637s Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 libxaw7 amd64 2:1.0.14-1 [191 kB] 637s Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 libxi6 amd64 2:1.8.1-1 [32.4 kB] 637s Get:131 http://ftpmaster.internal/ubuntu noble/universe amd64 libzzip-0-13 amd64 0.13.72+dfsg.1-1.1 [27.0 kB] 637s Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 637s Get:133 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 637s Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 637s Get:135 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 638s Get:136 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 638s Get:137 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 638s Get:138 http://ftpmaster.internal/ubuntu noble/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 638s Get:139 http://ftpmaster.internal/ubuntu noble/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 638s Get:140 http://ftpmaster.internal/ubuntu noble/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 638s Get:141 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc-data all 3.1.3-1 [92.4 kB] 638s Get:142 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc amd64 3.1.3+ds-2 [26.9 MB] 638s Get:143 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 638s Get:144 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 638s Get:145 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 638s Get:146 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 638s Get:147 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 638s Get:148 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 638s Get:149 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 638s Get:150 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocbaseutils all 1.4.0+dfsg-1 [31.3 kB] 638s Get:151 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 638s Get:152 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-digest amd64 0.6.34-1 [186 kB] 638s Get:153 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 638s Get:154 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 638s Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 638s Get:156 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltools amd64 0.5.7-1 [369 kB] 638s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-evaluate all 0.23-1 [90.2 kB] 638s Get:158 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xfun amd64 0.41+dfsg-1 [415 kB] 638s Get:159 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 638s Get:160 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-yaml amd64 2.3.8-1 [108 kB] 638s Get:161 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 638s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 638s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 638s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 638s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 638s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 638s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 638s Get:168 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 638s Get:169 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 638s Get:170 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mime amd64 0.12-1 [35.8 kB] 638s Get:171 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fs amd64 1.6.3+dfsg-1 [229 kB] 638s Get:172 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 638s Get:173 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 638s Get:174 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sass amd64 0.4.8+dfsg-1 [996 kB] 638s Get:175 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 638s Get:176 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 638s Get:177 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 638s Get:178 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 638s Get:179 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 638s Get:180 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 638s Get:181 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytex all 0.49-1 [141 kB] 638s Get:182 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 638s Get:183 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 638s Get:184 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 638s Get:185 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 638s Get:186 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-promises amd64 1.2.1+dfsg-1 [284 kB] 638s Get:187 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httpuv amd64 1.6.14+dfsg-1 [510 kB] 638s Get:188 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 638s Get:189 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 638s Get:190 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 638s Get:191 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 638s Get:192 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 638s Get:193 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 638s Get:194 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 638s Get:195 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 638s Get:196 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 638s Get:197 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 638s Get:198 http://ftpmaster.internal/ubuntu noble/universe amd64 tex-common all 6.18 [32.8 kB] 638s Get:199 http://ftpmaster.internal/ubuntu noble/main amd64 t1utils amd64 1.41-4build2 [61.3 kB] 638s Get:200 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-binaries amd64 2023.20230311.66589-9 [8529 kB] 638s Get:201 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-base all 2023.20240207-1 [21.7 MB] 638s Get:202 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-latex-base all 2023.20240207-1 [1238 kB] 638s Get:203 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 639s Get:204 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 639s Get:205 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytest all 1.4.1-1 [674 kB] 639s Preconfiguring packages ... 639s Fetched 321 MB in 2s (144 MB/s) 639s Selecting previously unselected package libc-dev-bin. 640s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 640s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 640s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 640s Selecting previously unselected package linux-libc-dev:amd64. 640s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 640s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 640s Selecting previously unselected package libcrypt-dev:amd64. 640s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 640s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 640s Selecting previously unselected package libtirpc-dev:amd64. 640s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 640s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 640s Selecting previously unselected package libnsl-dev:amd64. 640s Preparing to unpack .../004-libnsl-dev_1.3.0-3_amd64.deb ... 640s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 640s Selecting previously unselected package rpcsvc-proto. 640s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 640s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 640s Selecting previously unselected package libc6-dev:amd64. 640s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_amd64.deb ... 640s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 640s Selecting previously unselected package libisl23:amd64. 640s Preparing to unpack .../007-libisl23_0.26-3_amd64.deb ... 640s Unpacking libisl23:amd64 (0.26-3) ... 640s Selecting previously unselected package libmpc3:amd64. 640s Preparing to unpack .../008-libmpc3_1.3.1-1_amd64.deb ... 640s Unpacking libmpc3:amd64 (1.3.1-1) ... 640s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 640s Preparing to unpack .../009-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 640s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 640s Selecting previously unselected package cpp-13. 640s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 640s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 640s Selecting previously unselected package cpp-x86-64-linux-gnu. 640s Preparing to unpack .../011-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 640s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 640s Selecting previously unselected package cpp. 640s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 640s Unpacking cpp (4:13.2.0-7ubuntu1) ... 640s Selecting previously unselected package libcc1-0:amd64. 640s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 640s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 640s Selecting previously unselected package libgomp1:amd64. 640s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 640s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 640s Selecting previously unselected package libitm1:amd64. 640s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_amd64.deb ... 640s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 640s Selecting previously unselected package libatomic1:amd64. 640s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 640s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 640s Selecting previously unselected package libasan8:amd64. 640s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_amd64.deb ... 640s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 640s Selecting previously unselected package liblsan0:amd64. 641s 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libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 642s Selecting previously unselected package fontconfig. 642s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 642s Unpacking fontconfig (2.15.0-1ubuntu1) ... 642s Selecting previously unselected package fonts-font-awesome. 642s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 642s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 642s Selecting previously unselected package fonts-glyphicons-halflings. 642s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 642s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 642s Selecting previously unselected package fonts-lmodern. 642s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 642s Unpacking fonts-lmodern (2.005-1) ... 642s Selecting previously unselected package fonts-mathjax. 642s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 642s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 643s Selecting previously unselected package libgfortran5:amd64. 643s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 643s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 643s Selecting previously unselected package libgfortran-13-dev:amd64. 643s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 643s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 643s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 643s Preparing to unpack .../046-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 643s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 643s Selecting previously unselected package gfortran-13. 643s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 643s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 643s Selecting previously unselected package gfortran-x86-64-linux-gnu. 643s Preparing to unpack .../048-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 643s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 643s Selecting previously unselected package gfortran. 643s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 643s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 643s Selecting previously unselected package icu-devtools. 643s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_amd64.deb ... 643s Unpacking icu-devtools (74.2-1ubuntu1) ... 643s Selecting previously unselected package javascript-common. 643s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 643s Unpacking javascript-common (11+nmu1) ... 643s Selecting previously unselected package libio-string-perl. 643s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 643s Unpacking libio-string-perl (1.08-4) ... 643s Selecting previously unselected package liblatex-tounicode-perl. 643s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 643s Unpacking liblatex-tounicode-perl (0.54-2) ... 643s Selecting previously unselected package libbibtex-parser-perl. 643s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 643s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 643s Selecting previously unselected package libblas3:amd64. 643s Preparing to unpack .../055-libblas3_3.12.0-3_amd64.deb ... 643s Unpacking libblas3:amd64 (3.12.0-3) ... 643s Selecting previously unselected package libblas-dev:amd64. 643s Preparing to unpack .../056-libblas-dev_3.12.0-3_amd64.deb ... 643s Unpacking libblas-dev:amd64 (3.12.0-3) ... 643s Selecting previously unselected package libbz2-dev:amd64. 643s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 643s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 643s Selecting previously unselected package libpixman-1-0:amd64. 643s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_amd64.deb ... 643s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 643s Selecting previously unselected package libxcb-render0:amd64. 643s Preparing to unpack .../059-libxcb-render0_1.15-1_amd64.deb ... 643s Unpacking libxcb-render0:amd64 (1.15-1) ... 643s Selecting previously unselected package libxcb-shm0:amd64. 643s Preparing to unpack .../060-libxcb-shm0_1.15-1_amd64.deb ... 643s Unpacking libxcb-shm0:amd64 (1.15-1) ... 643s Selecting previously unselected package libxrender1:amd64. 643s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 643s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 643s Selecting previously unselected package libcairo2:amd64. 643s Preparing to unpack .../062-libcairo2_1.18.0-1_amd64.deb ... 643s Unpacking libcairo2:amd64 (1.18.0-1) ... 643s Selecting previously unselected package libdatrie1:amd64. 643s Preparing to unpack .../063-libdatrie1_0.2.13-3_amd64.deb ... 643s Unpacking libdatrie1:amd64 (0.2.13-3) ... 643s Selecting previously unselected package libdeflate0:amd64. 643s Preparing to unpack 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645s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 645s Selecting previously unselected package libthai-data. 645s Preparing to unpack .../096-libthai-data_0.1.29-2_all.deb ... 645s Unpacking libthai-data (0.1.29-2) ... 645s Selecting previously unselected package libthai0:amd64. 645s Preparing to unpack .../097-libthai0_0.1.29-2_amd64.deb ... 645s Unpacking libthai0:amd64 (0.1.29-2) ... 645s Selecting previously unselected package libpango-1.0-0:amd64. 645s Preparing to unpack .../098-libpango-1.0-0_1.51.0+ds-4_amd64.deb ... 645s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ... 645s Selecting previously unselected package libpangoft2-1.0-0:amd64. 645s Preparing to unpack .../099-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ... 645s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 645s Selecting previously unselected package libpangocairo-1.0-0:amd64. 645s Preparing to unpack .../100-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ... 645s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 645s Selecting previously unselected package libpaper1:amd64. 645s Preparing to unpack .../101-libpaper1_1.1.29_amd64.deb ... 645s Unpacking libpaper1:amd64 (1.1.29) ... 645s Selecting previously unselected package libpaper-utils. 645s Preparing to unpack .../102-libpaper-utils_1.1.29_amd64.deb ... 645s Unpacking libpaper-utils (1.1.29) ... 645s Selecting previously unselected package libpcre2-16-0:amd64. 645s Preparing to unpack .../103-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ... 645s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 645s Selecting previously unselected package libpcre2-32-0:amd64. 645s Preparing to unpack .../104-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ... 645s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 645s Selecting previously unselected package libpcre2-posix3:amd64. 645s Preparing to unpack .../105-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ... 645s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 645s Selecting previously unselected package libpcre2-dev:amd64. 645s Preparing to unpack .../106-libpcre2-dev_10.42-4ubuntu1_amd64.deb ... 645s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ... 645s Selecting previously unselected package libpkgconf3:amd64. 645s Preparing to unpack .../107-libpkgconf3_1.8.1-2_amd64.deb ... 645s Unpacking libpkgconf3:amd64 (1.8.1-2) ... 645s Selecting previously unselected package zlib1g-dev:amd64. 645s Preparing to unpack .../108-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ... 645s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 645s Selecting previously unselected package libpng-dev:amd64. 645s Preparing to unpack .../109-libpng-dev_1.6.43-1_amd64.deb ... 645s Unpacking libpng-dev:amd64 (1.6.43-1) ... 645s Selecting previously unselected package libpotrace0:amd64. 646s Preparing to unpack .../110-libpotrace0_1.16-2_amd64.deb ... 646s Unpacking libpotrace0:amd64 (1.16-2) ... 646s Selecting previously unselected package libptexenc1:amd64. 646s Preparing to unpack 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Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 646s Selecting previously unselected package libxft2:amd64. 646s Preparing to unpack .../122-libxft2_2.3.6-1_amd64.deb ... 646s Unpacking libxft2:amd64 (2.3.6-1) ... 646s Selecting previously unselected package libxss1:amd64. 646s Preparing to unpack .../123-libxss1_1%3a1.2.3-1build2_amd64.deb ... 646s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 646s Selecting previously unselected package libtk8.6:amd64. 646s Preparing to unpack .../124-libtk8.6_8.6.13-2_amd64.deb ... 646s Unpacking libtk8.6:amd64 (8.6.13-2) ... 646s Selecting previously unselected package libxt6:amd64. 646s Preparing to unpack .../125-libxt6_1%3a1.2.1-1.1_amd64.deb ... 646s Unpacking libxt6:amd64 (1:1.2.1-1.1) ... 646s Selecting previously unselected package libxmu6:amd64. 646s Preparing to unpack .../126-libxmu6_2%3a1.1.3-3_amd64.deb ... 646s Unpacking libxmu6:amd64 (2:1.1.3-3) ... 646s Selecting previously unselected package libxpm4:amd64. 646s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1_amd64.deb ... 646s Unpacking libxpm4:amd64 (1:3.5.17-1) ... 646s Selecting previously unselected package libxaw7:amd64. 646s Preparing to unpack .../128-libxaw7_2%3a1.0.14-1_amd64.deb ... 646s Unpacking libxaw7:amd64 (2:1.0.14-1) ... 646s Selecting previously unselected package libxi6:amd64. 646s Preparing to unpack .../129-libxi6_2%3a1.8.1-1_amd64.deb ... 646s Unpacking libxi6:amd64 (2:1.8.1-1) ... 646s Selecting previously unselected package libzzip-0-13:amd64. 646s Preparing to unpack .../130-libzzip-0-13_0.13.72+dfsg.1-1.1_amd64.deb ... 646s Unpacking libzzip-0-13:amd64 (0.13.72+dfsg.1-1.1) ... 646s Selecting previously unselected package zip. 646s Preparing to unpack .../131-zip_3.0-13_amd64.deb ... 646s Unpacking zip (3.0-13) ... 646s Selecting previously unselected package unzip. 646s Preparing to unpack .../132-unzip_6.0-28ubuntu3_amd64.deb ... 646s Unpacking unzip (6.0-28ubuntu3) ... 646s Selecting previously unselected package xdg-utils. 646s Preparing to unpack .../133-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 646s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 646s Selecting previously unselected package r-base-core. 646s Preparing to unpack .../134-r-base-core_4.3.2-1build1_amd64.deb ... 646s Unpacking r-base-core (4.3.2-1build1) ... 647s Selecting previously unselected package r-cran-littler. 647s Preparing to unpack .../135-r-cran-littler_0.3.19-1_amd64.deb ... 647s Unpacking r-cran-littler (0.3.19-1) ... 647s Selecting previously unselected package littler. 647s Preparing to unpack .../136-littler_0.3.19-1_all.deb ... 647s Unpacking littler (0.3.19-1) ... 647s Selecting previously unselected package node-bootstrap-sass. 647s Preparing to unpack .../137-node-bootstrap-sass_3.4.3-2_all.deb ... 647s Unpacking node-bootstrap-sass (3.4.3-2) ... 647s Selecting previously unselected package node-html5shiv. 647s Preparing to unpack .../138-node-html5shiv_3.7.3+dfsg-5_all.deb ... 647s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 647s Selecting previously unselected package node-normalize.css. 647s Preparing to unpack .../139-node-normalize.css_8.0.1-5_all.deb ... 647s Unpacking node-normalize.css (8.0.1-5) ... 647s Selecting previously unselected package pandoc-data. 647s Preparing to unpack .../140-pandoc-data_3.1.3-1_all.deb ... 647s Unpacking pandoc-data (3.1.3-1) ... 647s Selecting previously unselected package pandoc. 647s Preparing to unpack .../141-pandoc_3.1.3+ds-2_amd64.deb ... 647s Unpacking pandoc (3.1.3+ds-2) ... 648s Selecting previously unselected package pkgconf-bin. 648s Preparing to unpack .../142-pkgconf-bin_1.8.1-2_amd64.deb ... 648s Unpacking pkgconf-bin (1.8.1-2) ... 648s Selecting previously unselected package pkgconf:amd64. 648s Preparing to unpack .../143-pkgconf_1.8.1-2_amd64.deb ... 648s Unpacking pkgconf:amd64 (1.8.1-2) ... 648s Selecting previously unselected package pkg-config:amd64. 648s Preparing to unpack .../144-pkg-config_1.8.1-2_amd64.deb ... 648s Unpacking pkg-config:amd64 (1.8.1-2) ... 648s Selecting previously unselected package liblzma-dev:amd64. 648s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_amd64.deb ... 648s Unpacking liblzma-dev:amd64 (5.4.5-0.3) ... 648s Selecting previously unselected package r-base-dev. 648s Preparing to unpack .../146-r-base-dev_4.3.2-1build1_all.deb ... 648s Unpacking r-base-dev (4.3.2-1build1) ... 648s Selecting previously unselected package pkg-r-autopkgtest. 648s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 648s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 648s Selecting previously unselected package r-bioc-biocgenerics. 648s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 648s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 648s Selecting previously unselected package r-bioc-biocbaseutils. 648s Preparing to unpack .../149-r-bioc-biocbaseutils_1.4.0+dfsg-1_all.deb ... 648s Unpacking r-bioc-biocbaseutils (1.4.0+dfsg-1) ... 648s Selecting previously unselected package r-cran-base64enc. 648s Preparing to unpack .../150-r-cran-base64enc_0.1-3-3_amd64.deb ... 648s Unpacking r-cran-base64enc (0.1-3-3) ... 648s Selecting previously unselected package r-cran-digest. 648s Preparing to unpack .../151-r-cran-digest_0.6.34-1_amd64.deb ... 648s Unpacking r-cran-digest (0.6.34-1) ... 648s Selecting previously unselected package r-cran-rlang. 648s Preparing to unpack .../152-r-cran-rlang_1.1.3-1_amd64.deb ... 648s Unpacking r-cran-rlang (1.1.3-1) ... 648s Selecting previously unselected package r-cran-ellipsis. 648s Preparing to unpack .../153-r-cran-ellipsis_0.3.2-2_amd64.deb ... 648s Unpacking r-cran-ellipsis (0.3.2-2) ... 648s Selecting previously unselected package r-cran-fastmap. 648s Preparing to unpack .../154-r-cran-fastmap_1.1.1-1_amd64.deb ... 648s Unpacking r-cran-fastmap (1.1.1-1) ... 648s Selecting previously unselected package r-cran-htmltools. 648s Preparing to unpack .../155-r-cran-htmltools_0.5.7-1_amd64.deb ... 648s Unpacking r-cran-htmltools (0.5.7-1) ... 648s Selecting previously unselected package r-cran-evaluate. 648s Preparing to unpack .../156-r-cran-evaluate_0.23-1_all.deb ... 648s Unpacking r-cran-evaluate (0.23-1) ... 648s Selecting previously unselected package r-cran-xfun. 648s Preparing to unpack .../157-r-cran-xfun_0.41+dfsg-1_amd64.deb ... 648s Unpacking r-cran-xfun (0.41+dfsg-1) ... 648s Selecting previously unselected package r-cran-highr. 648s Preparing to unpack .../158-r-cran-highr_0.10+dfsg-1_all.deb ... 648s Unpacking r-cran-highr (0.10+dfsg-1) ... 648s Selecting previously unselected package r-cran-yaml. 648s Preparing to unpack .../159-r-cran-yaml_2.3.8-1_amd64.deb ... 648s Unpacking r-cran-yaml (2.3.8-1) ... 648s Selecting previously unselected package libjs-mathjax. 648s Preparing to unpack .../160-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 648s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 649s Selecting previously unselected package r-cran-knitr. 649s Preparing to unpack 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unselected package r-cran-lifecycle. 649s Preparing to unpack .../167-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 649s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 649s Selecting previously unselected package r-cran-memoise. 649s Preparing to unpack .../168-r-cran-memoise_2.0.1-1_all.deb ... 649s Unpacking r-cran-memoise (2.0.1-1) ... 649s Selecting previously unselected package r-cran-mime. 649s Preparing to unpack .../169-r-cran-mime_0.12-1_amd64.deb ... 649s Unpacking r-cran-mime (0.12-1) ... 649s Selecting previously unselected package r-cran-fs. 649s Preparing to unpack .../170-r-cran-fs_1.6.3+dfsg-1_amd64.deb ... 649s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 649s Selecting previously unselected package r-cran-r6. 649s Preparing to unpack .../171-r-cran-r6_2.5.1-1_all.deb ... 649s Unpacking r-cran-r6 (2.5.1-1) ... 649s Selecting previously unselected package r-cran-rappdirs. 649s Preparing to unpack .../172-r-cran-rappdirs_0.3.3-1_amd64.deb ... 649s Unpacking r-cran-rappdirs 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package r-cran-later. 650s Preparing to unpack .../184-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 650s Unpacking r-cran-later (1.3.2+dfsg-1) ... 650s Selecting previously unselected package r-cran-promises. 650s Preparing to unpack .../185-r-cran-promises_1.2.1+dfsg-1_amd64.deb ... 650s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 650s Selecting previously unselected package r-cran-httpuv. 650s Preparing to unpack .../186-r-cran-httpuv_1.6.14+dfsg-1_amd64.deb ... 650s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 650s Selecting previously unselected package r-cran-xtable. 650s Preparing to unpack .../187-r-cran-xtable_1%3a1.8-4-2_all.deb ... 650s Unpacking r-cran-xtable (1:1.8-4-2) ... 650s Selecting previously unselected package r-cran-sourcetools. 650s Preparing to unpack .../188-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 650s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 650s Selecting previously unselected package r-cran-crayon. 650s Preparing to unpack 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650s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 651s Selecting previously unselected package r-cran-bookdown. 651s Preparing to unpack .../195-r-cran-bookdown_0.37+dfsg-1_all.deb ... 651s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 651s Selecting previously unselected package r-cran-biocmanager. 651s Preparing to unpack .../196-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 651s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 651s Selecting previously unselected package tex-common. 651s Preparing to unpack .../197-tex-common_6.18_all.deb ... 651s Unpacking tex-common (6.18) ... 651s Selecting previously unselected package t1utils. 651s Preparing to unpack .../198-t1utils_1.41-4build2_amd64.deb ... 651s Unpacking t1utils (1.41-4build2) ... 651s Selecting previously unselected package texlive-binaries. 651s Preparing to unpack .../199-texlive-binaries_2023.20230311.66589-9_amd64.deb ... 651s Unpacking texlive-binaries (2023.20230311.66589-9) ... 651s Selecting previously unselected 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656s Setting up x11-common (1:7.7+23ubuntu2) ... 657s Setting up node-html5shiv (3.7.3+dfsg-5) ... 657s Setting up libdeflate0:amd64 (1.19-1) ... 657s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 657s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 657s Setting up libxcb-shm0:amd64 (1.15-1) ... 657s Setting up libzzip-0-13:amd64 (0.13.72+dfsg.1-1.1) ... 657s Setting up libpaper-utils (1.1.29) ... 657s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 657s Setting up libjs-modernizr (2.6.2+ds1-5) ... 657s Setting up libjbig0:amd64 (2.1-6.1ubuntu1) ... 657s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 657s Setting up libjs-es5-shim (4.6.7-2) ... 657s Setting up tex-common (6.18) ... 657s update-language: texlive-base not installed and configured, doing nothing! 657s Setting up libio-string-perl (1.08-4) ... 657s Setting up zip (3.0-13) ... 657s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 657s Setting up libblas3:amd64 (3.12.0-3) ... 657s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 657s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 657s Setting up libpkgconf3:amd64 (1.8.1-2) ... 657s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 657s Setting up libteckit0:amd64 (2.5.12+ds1-1) ... 657s Setting up t1utils (1.41-4build2) ... 657s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 657s Setting up libtexlua53-5:amd64 (2023.20230311.66589-9) ... 657s Setting up libjs-d3 (3.5.17-4) ... 657s Setting up fonts-dejavu-mono (2.37-8) ... 657s Setting up libmpc3:amd64 (1.3.1-1) ... 657s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 657s Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... 657s Setting up icu-devtools (74.2-1ubuntu1) ... 657s Setting up fonts-dejavu-core (2.37-8) ... 657s Setting up pkgconf-bin (1.8.1-2) ... 657s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 657s Setting up libkpathsea6:amd64 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libsynctex2:amd64 (2023.20230311.66589-9) ... 657s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 657s Setting up libpotrace0:amd64 (1.16-2) ... 657s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 657s Setting up libice6:amd64 (2:1.0.10-1build2) ... 657s Setting up liblapack3:amd64 (3.12.0-3) ... 657s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 657s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 657s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 657s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 657s Setting up libbibtex-parser-perl (1.04+dfsg-1) ... 657s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 657s Setting up pkgconf:amd64 (1.8.1-2) ... 657s Setting up libthai0:amd64 (0.1.29-2) ... 657s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 657s Setting up libptexenc1:amd64 (2023.20230311.66589-9) ... 657s Setting up pandoc (3.1.3+ds-2) ... 657s Setting up liblapack-dev:amd64 (3.12.0-3) ... 657s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 657s Setting up pkg-config:amd64 (1.8.1-2) ... 657s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 657s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 657s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 657s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 657s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 657s Setting up libsm6:amd64 (2:1.2.3-1build2) ... 657s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ... 657s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 657s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 657s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 657s Setting up fontconfig (2.15.0-1ubuntu1) ... 660s Regenerating fonts cache... done. 660s Setting up 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660s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 660s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 660s Setting up libpng-dev:amd64 (1.6.43-1) ... 660s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 660s Setting up libxaw7:amd64 (2:1.0.14-1) ... 660s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 660s Setting up gcc (4:13.2.0-7ubuntu1) ... 660s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 660s Setting up r-base-core (4.3.2-1build1) ... 660s 660s Creating config file /etc/R/Renviron with new version 660s Setting up r-cran-crayon (1.5.2-1) ... 660s Setting up r-cran-sourcetools (0.1.7-1-1) ... 660s Setting up r-cran-tinytest (1.4.1-1) ... 660s Setting up texlive-binaries (2023.20230311.66589-9) ... 660s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 660s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 660s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 660s Setting up r-cran-commonmark (1.9.1-1) ... 660s Setting up r-cran-r6 (2.5.1-1) ... 660s Setting up r-cran-pkgkitten (0.2.3-1) ... 660s Setting up texlive-base (2023.20240207-1) ... 660s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 661s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 661s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 661s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 661s Setting up r-cran-magrittr (2.0.3-1) ... 661s Setting up r-cran-rappdirs (0.3.3-1) ... 661s Setting up r-cran-littler (0.3.19-1) ... 661s Setting up r-cran-fs (1.6.3+dfsg-1) ... 661s Setting up r-cran-rcpp (1.0.12-1) ... 661s Setting up g++-13 (13.2.0-17ubuntu2) ... 661s Setting up r-bioc-biocgenerics (0.48.1-2) ... 661s Setting up r-cran-rlang (1.1.3-1) ... 661s Setting up littler (0.3.19-1) ... 661s Setting up r-cran-xfun (0.41+dfsg-1) ... 661s Setting up r-cran-withr (2.5.0-1) ... 661s Setting up r-cran-mime (0.12-1) ... 661s Setting up r-cran-base64enc (0.1-3-3) ... 661s Setting up r-cran-digest (0.6.34-1) ... 661s Setting up r-cran-yaml (2.3.8-1) ... 661s Setting up r-cran-evaluate (0.23-1) ... 661s Setting up r-cran-highr (0.10+dfsg-1) ... 661s Setting up r-cran-glue (1.7.0-1) ... 661s Setting up r-cran-xtable (1:1.8-4-2) ... 661s Setting up r-cran-cli (3.6.2-1) ... 661s Setting up gfortran (4:13.2.0-7ubuntu1) ... 661s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 661s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 661s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 661s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 661s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 661s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 661s Setting up r-cran-fastmap (1.1.1-1) ... 661s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 661s Setting up r-cran-stringi (1.8.3-1) ... 661s Setting up texlive-latex-base (2023.20240207-1) ... 662s Setting up r-cran-later (1.3.2+dfsg-1) ... 662s Setting up r-cran-tinytex (0.49-1) ... 662s Setting up r-cran-knitr (1.45+dfsg-1) ... 662s Setting up g++ (4:13.2.0-7ubuntu1) ... 662s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 662s Setting up r-cran-cachem (1.0.8-1) ... 662s Setting up r-bioc-biocbaseutils (1.4.0+dfsg-1) ... 662s Setting up build-essential (12.10ubuntu1) ... 662s Setting up r-cran-vctrs (0.6.5-1) ... 662s Setting up r-cran-ellipsis (0.3.2-2) ... 662s Setting up r-base-dev (4.3.2-1build1) ... 662s Setting up r-cran-stringr (1.5.1-1) ... 662s Setting up texlive-bibtex-extra (2023.20240207-1) ... 662s Setting up r-cran-memoise (2.0.1-1) ... 662s Setting up r-cran-promises (1.2.1+dfsg-1) ... 662s Setting up r-cran-htmltools (0.5.7-1) ... 662s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 662s Setting up r-cran-sass (0.4.8+dfsg-1) ... 662s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 662s Setting up r-cran-fontawesome (0.5.2-1) ... 662s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 662s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 662s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 662s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 662s Setting up r-cran-bookdown (0.37+dfsg-1) ... 662s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 662s Processing triggers for libc-bin (2.39-0ubuntu2) ... 662s Processing triggers for man-db (2.12.0-3) ... 663s Processing triggers for install-info (7.1-3) ... 663s Processing triggers for tex-common (6.18) ... 664s Running updmap-sys. This may take some time... done. 664s Running mktexlsr /var/lib/texmf ... done. 664s Building format(s) --all. 694s This may take some time... done. 695s Reading package lists... 695s Building dependency tree... 695s Reading state information... 695s Starting pkgProblemResolver with broken count: 0 695s Starting 2 pkgProblemResolver with broken count: 0 695s Done 696s The following NEW packages will be installed: 696s autopkgtest-satdep 696s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 696s Need to get 0 B/696 B of archives. 696s After this operation, 0 B of additional disk space will be used. 696s Get:1 /tmp/autopkgtest.aYGBrh/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 696s Selecting previously unselected package autopkgtest-satdep. 696s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 98198 files and directories currently installed.) 696s Preparing to unpack .../2-autopkgtest-satdep.deb ... 696s Unpacking autopkgtest-satdep (0) ... 696s Setting up autopkgtest-satdep (0) ... 698s (Reading database ... 98198 files and directories currently installed.) 698s Removing autopkgtest-satdep (0) ... 698s autopkgtest [01:21:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 698s autopkgtest [01:21:55]: test pkg-r-autopkgtest: [----------------------- 698s Test: Try to load the R library BiocBaseUtils 698s 698s R version 4.3.2 (2023-10-31) -- "Eye Holes" 698s Copyright (C) 2023 The R Foundation for Statistical Computing 698s Platform: x86_64-pc-linux-gnu (64-bit) 698s 698s R is free software and comes with ABSOLUTELY NO WARRANTY. 698s You are welcome to redistribute it under certain conditions. 698s Type 'license()' or 'licence()' for distribution details. 698s 698s R is a collaborative project with many contributors. 698s Type 'contributors()' for more information and 698s 'citation()' on how to cite R or R packages in publications. 698s 698s Type 'demo()' for some demos, 'help()' for on-line help, or 698s 'help.start()' for an HTML browser interface to help. 698s Type 'q()' to quit R. 698s 698s > library('BiocBaseUtils') 698s > 698s > 698s Other tests are currently unsupported! 698s They will be progressively added. 699s autopkgtest [01:21:56]: test pkg-r-autopkgtest: -----------------------] 699s autopkgtest [01:21:56]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 699s pkg-r-autopkgtest PASS 699s autopkgtest [01:21:56]: @@@@@@@@@@@@@@@@@@@@ summary 699s pkg-r-autopkgtest PASS