0s autopkgtest [00:51:36]: starting date and time: 2024-03-22 00:51:36+0000 0s autopkgtest [00:51:36]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [00:51:36]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.e_irluax/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base --apt-upgrade r-bioc-annotationdbi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-58.secgroup --name adt-noble-i386-r-bioc-annotationdbi-20240322-005136-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 1161s Creating nova instance adt-noble-i386-r-bioc-annotationdbi-20240322-005136-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240321.img (UUID 6f9effbc-61d8-4d0a-a7e9-883547f42ac1)... 1161s nova boot failed (attempt #1): 1161s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader') 1161s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader') 1161s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken') 1161s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth') 1161s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP') 1161s DEBUG (session:517) REQ: curl -g -i -X GET https://keystone.ps5.canonical.com:5000/v3 -H "Accept: application/json" -H "User-Agent: nova keystoneauth1/4.0.0 python-requests/2.22.0 CPython/3.8.10" 1161s DEBUG (connectionpool:962) Starting new HTTPS connection (1): keystone.ps5.canonical.com:5000 1161s DEBUG (connectionpool:429) https://keystone.ps5.canonical.com:5000 "GET /v3 HTTP/1.1" 200 267 1161s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 267 Content-Type: application/json Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=5, max=100 Server: Apache/2.4.41 (Ubuntu) Vary: X-Auth-Token x-openstack-request-id: req-0e4c6554-7630-4041-b62a-9aaf0fba02bc 1161s DEBUG (session:580) RESP BODY: {"version": {"id": "v3.14", "status": "stable", "updated": "2020-04-07T00:00:00Z", "links": [{"rel": "self", "href": "https://keystone.ps5.canonical.com:5000/v3/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.identity-v3+json"}]}} 1161s DEBUG (session:946) GET call to https://keystone.ps5.canonical.com:5000/v3 used request id req-0e4c6554-7630-4041-b62a-9aaf0fba02bc 1161s DEBUG (base:182) Making authentication request to https://keystone.ps5.canonical.com:5000/v3/auth/tokens 1161s DEBUG (connectionpool:429) https://keystone.ps5.canonical.com:5000 "POST /v3/auth/tokens HTTP/1.1" 201 11701 1161s DEBUG (base:187) {"token": {"methods": ["password"], "user": {"domain": {"id": "default", "name": "Default"}, "id": "c01f0e5a065246f2a090a7d191029fce", "name": "prod-proposed-migration", "password_expires_at": null}, "audit_ids": ["p7ZvYEdDSS6WGcmrBExVqA"], "expires_at": "2024-03-23T00:57:12.000000Z", "issued_at": "2024-03-22T00:57:12.000000Z", "project": {"domain": {"id": "default", "name": "Default"}, "id": "a77cf7d04cc348e3b9aad5180306c3dd", "name": "prod-proposed-migration_project"}, "is_domain": false, "roles": [{"id": "3c78c6ccb7a24b77a91e24246ff0896e", "name": "member"}, {"id": "f84069c3d10e4eebaea55b7499d804ac", "name": "reader"}], "is_admin_project": false, "catalog": [{"endpoints": [{"id": "381f92a8b48942dfbfdf1f2569df8e5a", "interface": "internal", "region_id": "prodstack5", "url": "https://heat-internal.ps5.canonical.com:8004/v1/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "57c801b8efae427bb38d127888ec39c7", "interface": "admin", "region_id": "prodstack5", "url": "https://heat-admin.ps5.canonical.com:8004/v1/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "edae1b88012c46b892b6ca4d670e78e6", "interface": "public", "region_id": "prodstack5", "url": "https://heat.ps5.canonical.com:8004/v1/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "0c32215c880f45ebb55fa813d2c01a05", "type": "orchestration", "name": "heat"}, {"endpoints": [{"id": "3f327f9d25044e4dae537bc2aa694117", "interface": "internal", "region_id": "prodstack5", "url": "https://cinder-internal.ps5.canonical.com:8776/v3/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "be9b6d7a63fd4c2cbec3d3945d67da23", "interface": "admin", "region_id": "prodstack5", "url": "https://cinder-admin.ps5.canonical.com:8776/v3/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "f79fd684be71400084dd1871bf1ceed8", "interface": "public", "region_id": "prodstack5", "url": "https://cinder.ps5.canonical.com:8776/v3/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "0c799399b02f4d468844fac80cf78763", "type": "volumev3", "name": "cinderv3"}, {"endpoints": [{"id": "32d4ab1d59314991b616622f958c55a3", "interface": "admin", "region_id": "prodstack5", "url": "https://glance-admin.ps5.canonical.com:9292", "region": "prodstack5"}, {"id": "c0023fe925774a949a611bafa775b1dd", "interface": "public", "region_id": "prodstack5", "url": "https://glance.ps5.canonical.com:9292", "region": "prodstack5"}, {"id": "efdeffa94ac54e8485318b673fe00a62", "interface": "internal", "region_id": "prodstack5", "url": "https://glance-internal.ps5.canonical.com:9292", "region": "prodstack5"}], "id": "12a1596e978446df9f49adedf0281be4", "type": "image", "name": "glance"}, {"endpoints": [{"id": "35a1da84ece8457796097bbb42a7c48b", "interface": "public", "region_id": "prodstack5", "url": "https://neutron.ps5.canonical.com:9696", "region": "prodstack5"}, {"id": "76f58d33070d4716b6ace61da0cf5fab", "interface": "internal", "region_id": "prodstack5", "url": "https://neutron-internal.ps5.canonical.com:9696", "region": "prodstack5"}, {"id": "fa63ae5cd82345128c1e06d795bd5c5c", "interface": "admin", "region_id": "prodstack5", "url": "https://neutron-admin.ps5.canonical.com:9696", "region": "prodstack5"}], "id": "166ad5679b9e4430b00903524f1aa2e2", "type": "network", "name": "neutron"}, {"endpoints": [{"id": "51b3369f6bcb44d39d927fed38dfcb1d", "interface": "public", "region_id": "prodstack5", "url": "https://nova.ps5.canonical.com:8774/v2.1", "region": "prodstack5"}, {"id": "bde75440fd044085a599523fa768b3e0", "interface": "internal", "region_id": "prodstack5", "url": "https://nova-internal.ps5.canonical.com:8774/v2.1", "region": "prodstack5"}, {"id": "ebb570ffacb64d188008169beff10c7d", "interface": "admin", "region_id": "prodstack5", "url": "https://nova-admin.ps5.canonical.com:8774/v2.1", "region": "prodstack5"}], "id": "239a7e347ea145ba8900922319abfe0c", "type": "compute", "name": "nova"}, {"endpoints": [{"id": "7bc0cff06df9462eadc8f751b17b147b", "interface": "internal", "region_id": "prodstack5", "url": "https://gnocchi-internal.ps5.canonical.com:8041", "region": "prodstack5"}, {"id": "9eccd9a5774b450685f5be93e03eb579", "interface": "admin", "region_id": "prodstack5", "url": "https://gnocchi-admin.ps5.canonical.com:8041", "region": "prodstack5"}, {"id": "b116265ff15d46449f063572137c127e", "interface": "public", "region_id": "prodstack5", "url": "https://gnocchi.ps5.canonical.com:8041", "region": "prodstack5"}], "id": "3094700472a043d9a9095409791d1ebd", "type": "metric", "name": "gnocchi"}, {"endpoints": [{"id": "8ee6d1af15c5497393f87dadb8d88dc0", "interface": "public", "region_id": "prodstack5", "url": "https://octavia.ps5.canonical.com:9876", "region": "prodstack5"}, {"id": "d1ebffaac581458fbfe417de21f6179e", "interface": "internal", "region_id": "prodstack5", "url": "https://octavia-internal.ps5.canonical.com:9876", "region": "prodstack5"}, {"id": "fe6854cc50864b7e8884c666d0c49525", "interface": "admin", "region_id": "prodstack5", "url": "https://octavia-admin.ps5.canonical.com:9876", "region": "prodstack5"}], "id": "31368cb36db84561bd587221566417fe", "type": "load-balancer", "name": "octavia"}, {"endpoints": [{"id": "04c6279eb3274a8b9558481fcb84f91f", "interface": "admin", "region_id": "prodstack5", "url": "https://radosgw-admin.ps5.canonical.com:443/", "region": "prodstack5"}, {"id": "4078713c5b4e42af9af5181b0e370195", "interface": "public", "region_id": "prodstack5", "url": "https://radosgw.ps5.canonical.com:443/", "region": "prodstack5"}, {"id": "539afbfe83284d1794337ab29534d146", "interface": "internal", "region_id": "prodstack5", "url": "https://radosgw-internal.ps5.canonical.com:443/", "region": "prodstack5"}], "id": "33fe254c9ab3464f9cefb0735db5c7b6", "type": "s3", "name": "s3"}, {"endpoints": [{"id": "0e87b83617064bf4a310ac3b19bbb6d3", "interface": "admin", "region_id": "prodstack5", "url": "https://barbican-admin.ps5.canonical.com:9312", "region": "prodstack5"}, {"id": "11763e77618146d29b12e08749f72ebe", "interface": "public", "region_id": "prodstack5", "url": "https://barbican.ps5.canonical.com:9311", "region": "prodstack5"}, {"id": "c028b0aad7e64fc181028c5e580410ca", "interface": "internal", "region_id": "prodstack5", "url": "https://barbican-internal.ps5.canonical.com:9311", "region": "prodstack5"}], "id": "4a5b6290ebc64737b2ce1d680622c9b0", "type": "key-manager", "name": "barbican"}, {"endpoints": [{"id": "3e668beb71f6455d89614720578fb48e", "interface": "public", "region_id": "prodstack5", "url": "https://designate.ps5.canonical.com:9001", "region": "prodstack5"}, {"id": "4819d3baf6fe4074b00d4dbce532acc4", "interface": "admin", "region_id": "prodstack5", "url": "https://designate-admin.ps5.canonical.com:9001", "region": "prodstack5"}, {"id": "b40c9ffe39c64e5ca19cc2b1f3c74499", "interface": "internal", "region_id": "prodstack5", "url": "https://designate-internal.ps5.canonical.com:9001", "region": "prodstack5"}], "id": "4f3473e2e5994fee8132b0e6b5b96b10", "type": "dns", "name": "designate"}, {"endpoints": [{"id": "135a559d49ac4e308f9ba622ab4eea39", "interface": "admin", "region_id": "prodstack5", "url": "https://radosgw-admin.ps5.canonical.com:443/swift", "region": "prodstack5"}, {"id": "dbcd5cb805df4ab789e586b2d37cfebb", "interface": "public", "region_id": "prodstack5", "url": "https://radosgw.ps5.canonical.com:443/swift/v1/AUTH_a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "e313670eb03d431298eb0c604ebc0e5a", "interface": "internal", "region_id": "prodstack5", "url": "https://radosgw-internal.ps5.canonical.com:443/swift/v1/AUTH_a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "7066b013a1bf45ea88db389a412e7e0a", "type": "object-store", "name": "swift"}, {"endpoints": [{"id": "1f02cd17eafd4c6898ba27eef5c27551", "interface": "admin", "region_id": "prodstack5", "url": "https://placement-admin.ps5.canonical.com:8778", "region": "prodstack5"}, {"id": "4eae3072a321488f9ff8514f0b4f9d23", "interface": "public", "region_id": "prodstack5", "url": "https://placement.ps5.canonical.com:8778", "region": "prodstack5"}, {"id": "7df5a1a986ad42258d3d2006d28a5658", "interface": "internal", "region_id": "prodstack5", "url": "https://placement-internal.ps5.canonical.com:8778", "region": "prodstack5"}], "id": "85421f66b1804c6298c7a5db84b753a2", "type": "placement", "name": "placement"}, {"endpoints": [{"id": "30c12456f82b43d0b7b3b9b38ee6b98d", "interface": "admin", "region_id": "prodstack5", "url": "https://keystone-admin.ps5.canonical.com:35357/v3", "region": "prodstack5"}, {"id": "8affc90f95f54139ac786bac07c69664", "interface": "public", "region_id": "prodstack5", "url": "https://keystone.ps5.canonical.com:5000/v3", "region": "prodstack5"}, {"id": "be617e6c3fa442258fb5e88d9f29f498", "interface": "internal", "region_id": "prodstack5", "url": "https://keystone-internal.ps5.canonical.com:5000/v3", "region": "prodstack5"}], "id": "9cedc56a694848cca451e602ba3d3546", "type": "identity", "name": "keystone"}, {"endpoints": [{"id": "b141a016f502463f929fc43e1204af09", "interface": "admin", "region_id": "prodstack5", "url": "https://radosgw-admin.ps5.canonical.com:443/swift", "region": "prodstack5"}, {"id": "c87abc0d0d4040f690f29523f449b40b", "interface": "public", "region_id": "prodstack5", "url": "https://radosgw.ps5.canonical.com:443/swift/v1/AUTH_6dd669096f9045e28e7895ef3e130559/simplestreams/data/", "region": "prodstack5"}, {"id": "dbf5c3b539c64cf78fef488590bf537e", "interface": "internal", "region_id": "prodstack5", "url": "https://radosgw-internal.ps5.canonical.com:443/swift/v1/AUTH_6dd669096f9045e28e7895ef3e130559/simplestreams/data/", "region": "prodstack5"}], "id": "a65e443f46b64434b1f926d1726653d5", "type": "product-streams", "name": "image-stream"}, {"endpoints": [{"id": "99d93600c5a44bc2a1ed77537833df85", "interface": "public", "region_id": "prodstack5", "url": "https://heat.ps5.canonical.com:8000/v1", "region": "prodstack5"}, {"id": "d8b9ce900b4c462a9a76c0602e97f263", "interface": "internal", "region_id": "prodstack5", "url": "https://heat-internal.ps5.canonical.com:8000/v1", "region": "prodstack5"}, {"id": "e2e1febd025547ddb27708842cd059cc", "interface": "admin", "region_id": "prodstack5", "url": "https://heat-admin.ps5.canonical.com:8000/v1", "region": "prodstack5"}], "id": "c3e7bea8f4a34b7da8d6d2fdd2f32833", "type": "cloudformation", "name": "heat-cfn"}, {"endpoints": [{"id": "6292435b5b24409087de737781d5a760", "interface": "internal", "region_id": "prodstack5", "url": "https://aodh-internal.ps5.canonical.com:8042", "region": "prodstack5"}, {"id": "660cbccb033641b6ac3680c85facfec7", "interface": "public", "region_id": "prodstack5", "url": "https://aodh.ps5.canonical.com:8042", "region": "prodstack5"}, {"id": "90112245ed1f46409e701fa1c9c12194", "interface": "admin", "region_id": "prodstack5", "url": "https://aodh-admin.ps5.canonical.com:8042", "region": "prodstack5"}], "id": "c5fe16dbcbab4875a376b69e9d60762b", "type": "alarming", "name": "aodh"}, {"endpoints": [{"id": "147effd39862447690863776c948b462", "interface": "internal", "region_id": "prodstack5", "url": "https://cinder-internal.ps5.canonical.com:8776/v2/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "43c302450db34754a415aae292cf41bd", "interface": "public", "region_id": "prodstack5", "url": "https://cinder.ps5.canonical.com:8776/v2/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}, {"id": "5052f17402424f418e320f48665fe1ac", "interface": "admin", "region_id": "prodstack5", "url": "https://cinder-admin.ps5.canonical.com:8776/v2/a77cf7d04cc348e3b9aad5180306c3dd", "region": "prodstack5"}], "id": "da8a1d72b62843e1baa4ca44bd82a9d3", "type": "volumev2", "name": "cinderv2"}]}} 1161s REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" 1161s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" 1161s DEBUG (connectionpool:962) Starting new HTTPS connection (1): nova.ps5.canonical.com:8774 1161s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1 HTTP/1.1" 302 0 1161s RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps5.canonical.com:8774/v2.1/ Server: Apache/2.4.41 (Ubuntu) x-compute-request-id: req-47dfee4c-ce09-43f2-8308-b293f5a23657 x-openstack-request-id: req-47dfee4c-ce09-43f2-8308-b293f5a23657 1161s DEBUG (session:548) RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps5.canonical.com:8774/v2.1/ Server: Apache/2.4.41 (Ubuntu) x-compute-request-id: req-47dfee4c-ce09-43f2-8308-b293f5a23657 x-openstack-request-id: req-47dfee4c-ce09-43f2-8308-b293f5a23657 1161s RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged. 1161s DEBUG (session:580) RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged. 1161s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/ HTTP/1.1" 200 397 1161s RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-ba8d6caf-a5b5-4174-b4b7-85caffba265d x-openstack-request-id: req-ba8d6caf-a5b5-4174-b4b7-85caffba265d 1161s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-ba8d6caf-a5b5-4174-b4b7-85caffba265d x-openstack-request-id: req-ba8d6caf-a5b5-4174-b4b7-85caffba265d 1161s RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.87", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}} 1161s DEBUG (session:580) RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.87", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}} 1161s GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/ used request id req-ba8d6caf-a5b5-4174-b4b7-85caffba265d 1161s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/ used request id req-ba8d6caf-a5b5-4174-b4b7-85caffba265d 1161s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader') 1161s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader') 1161s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken') 1161s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth') 1161s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth') 1161s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP') 1161s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps5.canonical.com:9292/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" -H "X-OpenStack-Nova-API-Version: 2.87" 1161s DEBUG (connectionpool:962) Starting new HTTPS connection (1): glance.ps5.canonical.com:9292 1161s DEBUG (connectionpool:429) https://glance.ps5.canonical.com:9292 "GET /v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1 HTTP/1.1" 200 2114 1161s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 2114 Content-Type: application/json Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=5, max=100 Server: Apache/2.4.41 (Ubuntu) X-Openstack-Request-Id: req-90552a3a-e639-4641-820d-1321d564a2ad 1161s DEBUG (session:580) RESP BODY: {"architecture": "x86_64", "base_image_ref": "a8255c6f-27e8-4fbd-b2cb-48809d22500c", "boot_roles": "member,reader", "content_id": "auto.sync", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "6a3784f1-3e94-462d-b45c-90b8ddd16c15", "item_name": "disk1.img", "os_distro": "ubuntu", "os_version": "24.04", "owner_id": "a77cf7d04cc348e3b9aad5180306c3dd", "owner_project_name": "prod-proposed-migration_project", "owner_user_name": "prod-proposed-migration", "product_name": "com.ubuntu.cloud.daily:server:24.04:amd64", "simplestreams_metadata": "{\"aliases\": \"24.04,n,noble,devel\", \"arch\": \"amd64\", \"ftype\": \"disk1.img\", \"label\": \"daily\", \"md5\": \"7389041c488d1c996ccf0640bb16de5e\", \"os\": \"ubuntu\", \"pubname\": \"ubuntu-noble-daily-amd64-server-20240312\", \"release\": \"noble\", \"release_codename\": \"Noble Nu", "source_content_id": "com.ubuntu.cloud:daily:download", "user_id": "c01f0e5a065246f2a090a7d191029fce", "version_name": "20240312", "name": "adt/ubuntu-noble-amd64-server-20240321.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 2543845376, "virtual_size": null, "status": "active", "checksum": "fbba480b55e82d01bd693d32d7fdead6", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "a77cf7d04cc348e3b9aad5180306c3dd", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "c8728b3eec13ff3ef549329717a6ff9b10aba2208e87e2c14d54f3f65d6b5846af40ab70f67f880b4648ac9c5dce089c46d69f917eb27e86f84248dc3899a1d7", "id": "6f9effbc-61d8-4d0a-a7e9-883547f42ac1", "created_at": "2024-03-21T19:29:41Z", "updated_at": "2024-03-21T19:30:53Z", "locations": [{"url": "rbd://3d196f64-760e-11eb-b486-e7aafffac620/glance/6f9effbc-61d8-4d0a-a7e9-883547f42ac1/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://3d196f64-760e-11eb-b486-e7aafffac620/glance/6f9effbc-61d8-4d0a-a7e9-883547f42ac1/snap", "tags": [], "self": "/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1", "file": "/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1/file", "schema": "/v2/schemas/image", "stores": "ceph"} 1161s DEBUG (session:936) GET call to image for https://glance.ps5.canonical.com:9292/v2/images/6f9effbc-61d8-4d0a-a7e9-883547f42ac1 used request id req-90552a3a-e639-4641-820d-1321d564a2ad 1161s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1/flavors/autopkgtest -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" -H "X-OpenStack-Nova-API-Version: 2.87" 1161s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/flavors/autopkgtest HTTP/1.1" 404 84 1161s DEBUG (session:548) RESP: [404] Connection: Keep-Alive Content-Length: 84 Content-Type: application/json; charset=UTF-8 Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=998 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-43e8a889-b65b-4471-a84c-f2d73b1fd286 x-openstack-request-id: req-43e8a889-b65b-4471-a84c-f2d73b1fd286 1161s DEBUG (session:580) RESP BODY: {"itemNotFound": {"code": 404, "message": "Flavor autopkgtest could not be found."}} 1161s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/flavors/autopkgtest used request id req-43e8a889-b65b-4471-a84c-f2d73b1fd286 1161s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1/flavors?is_public=None -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" -H "X-OpenStack-Nova-API-Version: 2.87" 1161s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/flavors?is_public=None HTTP/1.1" 200 30288 1161s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 30288 Content-Type: application/json Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=997 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-3dffda28-e414-4022-92f3-e8ec6766305e x-openstack-request-id: req-3dffda28-e414-4022-92f3-e8ec6766305e 1161s DEBUG (session:580) RESP BODY: {"flavors": [{"id": "02e9c87a-a583-4e03-9b7a-e12ac6e718de", "name": "builder-cpu16-ram32-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/02e9c87a-a583-4e03-9b7a-e12ac6e718de"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/02e9c87a-a583-4e03-9b7a-e12ac6e718de"}], "description": null}, {"id": "05985aaa-bad3-4e3e-93f8-a52755995027", "name": "builder-cpu4-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/05985aaa-bad3-4e3e-93f8-a52755995027"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/05985aaa-bad3-4e3e-93f8-a52755995027"}], "description": null}, {"id": "07ae4bac-2ce3-4dd4-8019-4a62a43d8d3f", "name": "builder-cpu32-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/07ae4bac-2ce3-4dd4-8019-4a62a43d8d3f"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/07ae4bac-2ce3-4dd4-8019-4a62a43d8d3f"}], "description": null}, {"id": "09e7dbfc-161e-47ae-a384-5cd6334b2d8b", "name": "builder-cpu2-ram12-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/09e7dbfc-161e-47ae-a384-5cd6334b2d8b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/09e7dbfc-161e-47ae-a384-5cd6334b2d8b"}], "description": null}, {"id": "0f722088-0d98-4129-8e3d-b292a0adbe44", "name": "builder-cpu4-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/0f722088-0d98-4129-8e3d-b292a0adbe44"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/0f722088-0d98-4129-8e3d-b292a0adbe44"}], "description": null}, {"id": "1319cb50-758a-4b0a-9247-17f0e3fe4211", "name": "autopkgtest", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}], "description": null}, {"id": "13d4378b-9327-4969-89a6-3c6750d93680", "name": "builder-cpu8-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/13d4378b-9327-4969-89a6-3c6750d93680"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/13d4378b-9327-4969-89a6-3c6750d93680"}], "description": null}, {"id": "140a24f9-8b65-4a0b-a95f-eeb96f38c5e9", "name": "builder-cpu8-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/140a24f9-8b65-4a0b-a95f-eeb96f38c5e9"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/140a24f9-8b65-4a0b-a95f-eeb96f38c5e9"}], "description": null}, {"id": "16cc919c-7e15-43e1-ba1e-a49fed5e3401", "name": "builder-cpu2-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/16cc919c-7e15-43e1-ba1e-a49fed5e3401"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/16cc919c-7e15-43e1-ba1e-a49fed5e3401"}], "description": null}, {"id": "18f42ccb-05c4-4d80-989b-d367dbe45ba3", "name": "builder-cpu16-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/18f42ccb-05c4-4d80-989b-d367dbe45ba3"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/18f42ccb-05c4-4d80-989b-d367dbe45ba3"}], "description": null}, {"id": "1bdf7801-90e7-4c6a-9ccc-0930a31ca27b", "name": "builder-cpu16-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1bdf7801-90e7-4c6a-9ccc-0930a31ca27b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1bdf7801-90e7-4c6a-9ccc-0930a31ca27b"}], "description": null}, {"id": "1c18fadc-0f9b-4c9f-9595-8a74af82a72b", "name": "builder-cpu2-ram12-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1c18fadc-0f9b-4c9f-9595-8a74af82a72b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1c18fadc-0f9b-4c9f-9595-8a74af82a72b"}], "description": null}, {"id": "1e731fe2-ffd3-4c27-b149-e102eccfe052", "name": "builder-cpu8-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1e731fe2-ffd3-4c27-b149-e102eccfe052"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1e731fe2-ffd3-4c27-b149-e102eccfe052"}], "description": null}, {"id": "1f730b22-ac7a-4474-8ea5-09db60e42555", "name": "builder-cpu2-ram64-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1f730b22-ac7a-4474-8ea5-09db60e42555"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1f730b22-ac7a-4474-8ea5-09db60e42555"}], "description": null}, {"id": "25e742fd-7fed-43b3-9f3b-0258bb5053a0", "name": "builder-cpu32-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/25e742fd-7fed-43b3-9f3b-0258bb5053a0"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/25e742fd-7fed-43b3-9f3b-0258bb5053a0"}], "description": null}, {"id": "26b00ebd-f8ed-48ea-9ef2-88700638dc7b", "name": "builder-cpu32-ram32-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/26b00ebd-f8ed-48ea-9ef2-88700638dc7b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/26b00ebd-f8ed-48ea-9ef2-88700638dc7b"}], "description": null}, {"id": "2784156e-2387-494d-b64a-8ef8110b7b63", "name": "builder-cpu16-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/2784156e-2387-494d-b64a-8ef8110b7b63"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/2784156e-2387-494d-b64a-8ef8110b7b63"}], "description": null}, {"id": "28d0b426-6a41-45bf-ae80-a72fa286ae63", "name": "builder-cpu32-ram4-disk50", 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"bae423a2-460e-4fde-9931-6581734630f2", "name": "builder-cpu2-ram8-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bae423a2-460e-4fde-9931-6581734630f2"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bae423a2-460e-4fde-9931-6581734630f2"}], "description": null}, {"id": "bafb2a25-adf3-4c23-a2f2-bb93a7b322b5", "name": "builder-cpu8-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bafb2a25-adf3-4c23-a2f2-bb93a7b322b5"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bafb2a25-adf3-4c23-a2f2-bb93a7b322b5"}], "description": null}, {"id": "bc52d8c5-6267-4511-9ebb-968668f69b03", "name": "builder-cpu2-ram4-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bc52d8c5-6267-4511-9ebb-968668f69b03"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bc52d8c5-6267-4511-9ebb-968668f69b03"}], "description": null}, {"id": "bd3f2eeb-b0fc-49d5-9bf0-b116d353fe59", "name": "builder-cpu4-ram32-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bd3f2eeb-b0fc-49d5-9bf0-b116d353fe59"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bd3f2eeb-b0fc-49d5-9bf0-b116d353fe59"}], "description": null}, {"id": "bf774e98-a708-4015-aadd-a9d75e2e577e", "name": "builder-cpu8-ram64-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/bf774e98-a708-4015-aadd-a9d75e2e577e"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/bf774e98-a708-4015-aadd-a9d75e2e577e"}], "description": null}, {"id": "c8f31bd5-d40f-4ef0-8ad3-a378cc79be33", "name": "builder-cpu32-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/c8f31bd5-d40f-4ef0-8ad3-a378cc79be33"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/c8f31bd5-d40f-4ef0-8ad3-a378cc79be33"}], "description": null}, {"id": "c9a40e1b-3e3a-4b2b-9cb5-a8dcf3d277fd", "name": "builder-cpu4-ram4-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/c9a40e1b-3e3a-4b2b-9cb5-a8dcf3d277fd"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/c9a40e1b-3e3a-4b2b-9cb5-a8dcf3d277fd"}], "description": null}, {"id": "c9ccd7cb-7dc2-4c64-99fc-768fc34aea33", "name": "builder-cpu16-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/c9ccd7cb-7dc2-4c64-99fc-768fc34aea33"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/c9ccd7cb-7dc2-4c64-99fc-768fc34aea33"}], "description": null}, {"id": "ca65745f-04cc-4a79-b5d3-850d87ada100", "name": "builder-cpu2-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/ca65745f-04cc-4a79-b5d3-850d87ada100"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/ca65745f-04cc-4a79-b5d3-850d87ada100"}], "description": null}, {"id": "ca7d8fd5-7032-42fd-816d-e7b56688408b", "name": "builder-cpu2-ram44-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/ca7d8fd5-7032-42fd-816d-e7b56688408b"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/ca7d8fd5-7032-42fd-816d-e7b56688408b"}], "description": null}, {"id": "cc26157f-ed37-4dbd-abeb-1a460e5a3f89", "name": "builder-cpu2-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/cc26157f-ed37-4dbd-abeb-1a460e5a3f89"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/cc26157f-ed37-4dbd-abeb-1a460e5a3f89"}], "description": null}, {"id": "d1775bcf-3942-484b-92ff-f9c22cd4f971", "name": "builder-cpu2-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d1775bcf-3942-484b-92ff-f9c22cd4f971"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d1775bcf-3942-484b-92ff-f9c22cd4f971"}], "description": null}, {"id": "d83654b5-3a0f-47c4-9378-96534bc9d174", "name": "builder-cpu96-ram192-disk1000", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d83654b5-3a0f-47c4-9378-96534bc9d174"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d83654b5-3a0f-47c4-9378-96534bc9d174"}], "description": null}, {"id": "d8a4fd7d-9017-415f-9528-834277c9fedd", "name": "builder-cpu4-ram8-disk120", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d8a4fd7d-9017-415f-9528-834277c9fedd"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d8a4fd7d-9017-415f-9528-834277c9fedd"}], "description": null}, {"id": "d986a066-2af9-42cb-842a-1be8f588cfb1", "name": "builder-cpu2-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/d986a066-2af9-42cb-842a-1be8f588cfb1"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/d986a066-2af9-42cb-842a-1be8f588cfb1"}], "description": null}, {"id": "dd88672e-3c9b-48eb-b589-c710e92a3fcb", "name": "builder-cpu4-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/dd88672e-3c9b-48eb-b589-c710e92a3fcb"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/dd88672e-3c9b-48eb-b589-c710e92a3fcb"}], "description": null}, {"id": "dfa06abe-39ce-41b0-9309-79f3d3d12499", "name": "builder-cpu2-ram32-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/dfa06abe-39ce-41b0-9309-79f3d3d12499"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/dfa06abe-39ce-41b0-9309-79f3d3d12499"}], "description": null}, {"id": "e8da3984-1a76-4bb0-a502-48c4dc862979", "name": "builder-cpu4-ram32-disk50", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/e8da3984-1a76-4bb0-a502-48c4dc862979"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/e8da3984-1a76-4bb0-a502-48c4dc862979"}], "description": null}, {"id": "ecbfad98-f8ab-4fee-9978-ba5f2516b36c", "name": "builder-cpu4-ram16-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/ecbfad98-f8ab-4fee-9978-ba5f2516b36c"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/ecbfad98-f8ab-4fee-9978-ba5f2516b36c"}], "description": null}, {"id": "f14866bd-022b-43f8-996d-71cb0d89f87a", "name": "builder-cpu4-ram8-disk200", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f14866bd-022b-43f8-996d-71cb0d89f87a"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f14866bd-022b-43f8-996d-71cb0d89f87a"}], "description": null}, {"id": "f1ed6577-17da-4b4e-afc4-f9d7b9672cc5", "name": "builder-cpu2-ram12-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f1ed6577-17da-4b4e-afc4-f9d7b9672cc5"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f1ed6577-17da-4b4e-afc4-f9d7b9672cc5"}], "description": null}, {"id": "f2c24289-7055-4ca7-af16-a18d711558e9", "name": "builder-cpu8-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f2c24289-7055-4ca7-af16-a18d711558e9"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f2c24289-7055-4ca7-af16-a18d711558e9"}], "description": null}, {"id": "f431c620-abda-4a04-b4b1-c6699fdac063", "name": "builder-cpu2-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/f431c620-abda-4a04-b4b1-c6699fdac063"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/f431c620-abda-4a04-b4b1-c6699fdac063"}], "description": null}]} 1161s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/flavors?is_public=None used request id req-3dffda28-e414-4022-92f3-e8ec6766305e 1161s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" -H "X-OpenStack-Nova-API-Version: 2.87" 1161s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "GET /v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211 HTTP/1.1" 200 607 1161s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 607 Content-Type: application/json Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=996 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-8532d03b-5a97-4c90-b836-77d01738ae52 x-openstack-request-id: req-8532d03b-5a97-4c90-b836-77d01738ae52 1161s DEBUG (session:580) RESP BODY: {"flavor": {"id": "1319cb50-758a-4b0a-9247-17f0e3fe4211", "name": "autopkgtest", "ram": 4096, "disk": 20, "swap": 0, "OS-FLV-EXT-DATA:ephemeral": 0, "OS-FLV-DISABLED:disabled": false, "vcpus": 2, "os-flavor-access:is_public": false, "rxtx_factor": 1.0, "links": [{"rel": "self", "href": "https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}, {"rel": "bookmark", "href": "https://nova.ps5.canonical.com:8774/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211"}], "description": null, "extra_specs": {"aggregate_instance_extra_specs:commit": "builder", "hw_rng:allowed": "True"}}} 1161s DEBUG (session:936) GET call to compute for https://nova.ps5.canonical.com:8774/v2.1/flavors/1319cb50-758a-4b0a-9247-17f0e3fe4211 used request id req-8532d03b-5a97-4c90-b836-77d01738ae52 1161s DEBUG (session:517) REQ: curl -g -i -X POST https://nova.ps5.canonical.com:8774/v2.1/servers -H "Accept: application/json" -H "Content-Type: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}efedb5e8c4b3a59afe5c8678cc0124380662432980bce44574b165e4860e2738" -H "X-OpenStack-Nova-API-Version: 2.87" -d '{"server": {"name": "adt-noble-i386-r-bioc-annotationdbi-20240322-005136-juju-7f2275-prod-proposed-migration-environment-2", "imageRef": "6f9effbc-61d8-4d0a-a7e9-883547f42ac1", "flavorRef": "1319cb50-758a-4b0a-9247-17f0e3fe4211", "user_data": "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", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-2", "min_count": 1, "max_count": 1, "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-58.secgroup"}], "networks": [{"uuid": "0d0997a0-13bd-484c-b3b7-ebb3288d6a74"}]}}' 1161s DEBUG (connectionpool:429) https://nova.ps5.canonical.com:8774 "POST /v2.1/servers HTTP/1.1" 403 115 1161s DEBUG (session:548) RESP: [403] Connection: Keep-Alive Content-Length: 115 Content-Type: application/json; charset=UTF-8 Date: Fri, 22 Mar 2024 00:57:12 GMT Keep-Alive: timeout=75, max=995 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.41 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-52ee1e59-d1f8-4a95-b159-67a4c7c2f5b5 x-openstack-request-id: req-52ee1e59-d1f8-4a95-b159-67a4c7c2f5b5 1161s DEBUG (session:580) RESP BODY: {"forbidden": {"code": 403, "message": "Quota exceeded for cores: Requested 2, but already used 300 of 300 cores"}} 1161s DEBUG (session:936) POST call to compute for https://nova.ps5.canonical.com:8774/v2.1/servers used request id req-52ee1e59-d1f8-4a95-b159-67a4c7c2f5b5 1161s DEBUG (shell:822) Quota exceeded for cores: Requested 2, but already used 300 of 300 cores (HTTP 403) (Request-ID: req-52ee1e59-d1f8-4a95-b159-67a4c7c2f5b5) 1161s Traceback (most recent call last): 1161s File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 820, in main 1161s OpenStackComputeShell().main(argv) 1161s File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 742, in main 1161s args.func(self.cs, args) 1161s File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 971, in do_boot 1161s server = cs.servers.create(*boot_args, **boot_kwargs) 1161s File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 1477, in create 1161s return self._boot(response_key, *boot_args, **boot_kwargs) 1161s File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 836, in _boot 1161s return self._create('/servers', body, response_key, 1161s File "/usr/lib/python3/dist-packages/novaclient/base.py", line 363, in _create 1161s resp, body = self.api.client.post(url, body=body) 1161s File "/usr/lib/python3/dist-packages/keystoneauth1/adapter.py", line 392, in post 1161s return self.request(url, 'POST', **kwargs) 1161s File "/usr/lib/python3/dist-packages/novaclient/client.py", line 78, in request 1161s raise exceptions.from_response(resp, body, url, method) 1161s novaclient.exceptions.Forbidden: Quota exceeded for cores: Requested 2, but already used 300 of 300 cores (HTTP 403) (Request-ID: req-52ee1e59-d1f8-4a95-b159-67a4c7c2f5b5) 1161s ERROR (Forbidden): Quota exceeded for cores: Requested 2, but already used 300 of 300 cores (HTTP 403) (Request-ID: req-52ee1e59-d1f8-4a95-b159-67a4c7c2f5b5) 1163s autopkgtest [01:10:59]: testbed dpkg architecture: amd64 1163s autopkgtest [01:10:59]: testbed apt version: 2.7.12 1163s autopkgtest [01:10:59]: test architecture: i386 1163s autopkgtest [01:10:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1163s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 1164s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 1164s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 1164s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3765 kB] 1164s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 1164s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [703 kB] 1164s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [467 kB] 1164s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 1164s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 1164s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 1164s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 1164s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1271 kB] 1164s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 1164s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 1164s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 1164s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 1164s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 1167s Fetched 11.3 MB in 2s (6909 kB/s) 1167s Reading package lists... 1170s Reading package lists... 1170s Building dependency tree... 1170s Reading state information... 1170s Calculating upgrade... 1171s The following packages will be upgraded: 1171s cloud-init fonts-ubuntu-console python3-markupsafe 1171s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1171s Need to get 629 kB of archives. 1171s After this operation, 11.3 kB disk space will be freed. 1171s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 1171s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 python3-markupsafe amd64 2.1.5-1build1 [12.6 kB] 1171s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 cloud-init all 24.1.2-0ubuntu1 [597 kB] 1171s Preconfiguring packages ... 1171s Fetched 629 kB in 0s (21.2 MB/s) 1171s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 1171s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 1171s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 1171s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_amd64.deb ... 1171s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 1171s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 1172s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 1172s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 1172s Setting up cloud-init (24.1.2-0ubuntu1) ... 1173s Setting up python3-markupsafe (2.1.5-1build1) ... 1173s Processing triggers for man-db (2.12.0-3) ... 1174s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 1174s Reading package lists... 1175s Building dependency tree... 1175s Reading state information... 1175s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1176s sh: Attempting to set up Debian/Ubuntu apt sources automatically 1176s sh: Distribution appears to be Ubuntu 1177s Reading package lists... 1177s Building dependency tree... 1177s Reading state information... 1177s eatmydata is already the newest version (131-1). 1177s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1177s Reading package lists... 1177s Building dependency tree... 1177s Reading state information... 1178s dbus is already the newest version (1.14.10-4ubuntu1). 1178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1178s Reading package lists... 1178s Building dependency tree... 1178s Reading state information... 1178s rng-tools-debian is already the newest version (2.4). 1178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1178s Reading package lists... 1179s Building dependency tree... 1179s Reading state information... 1179s The following packages will be REMOVED: 1179s cloud-init* python3-configobj* python3-debconf* 1179s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 1179s After this operation, 3256 kB disk space will be freed. 1179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 1179s Removing cloud-init (24.1.2-0ubuntu1) ... 1180s Removing python3-configobj (5.0.8-3) ... 1180s Removing python3-debconf (1.5.86) ... 1180s Processing triggers for man-db (2.12.0-3) ... 1180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 1180s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 1181s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 1181s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 1181s invoke-rc.d: policy-rc.d denied execution of try-restart. 1181s Reading package lists... 1181s Building dependency tree... 1181s Reading state information... 1182s linux-generic is already the newest version (6.8.0-11.11+1). 1182s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1182s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 1182s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 1182s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 1184s Reading package lists... 1184s Reading package lists... 1184s Building dependency tree... 1184s Reading state information... 1185s Calculating upgrade... 1185s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1185s Reading package lists... 1185s Building dependency tree... 1185s Reading state information... 1185s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1186s autopkgtest [01:11:22]: rebooting testbed after setup commands that affected boot 1203s autopkgtest [01:11:39]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 1204s autopkgtest [01:11:40]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-annotationdbi 1205s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationdbi 1.64.1-1 (dsc) [2254 B] 1205s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationdbi 1.64.1-1 (tar) [4360 kB] 1205s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationdbi 1.64.1-1 (diff) [11.9 kB] 1205s gpgv: Signature made Thu Nov 30 13:02:58 2023 UTC 1205s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 1205s gpgv: issuer "tille@debian.org" 1205s gpgv: Can't check signature: No public key 1205s dpkg-source: warning: cannot verify inline signature for ./r-bioc-annotationdbi_1.64.1-1.dsc: no acceptable signature found 1205s autopkgtest [01:11:41]: testing package r-bioc-annotationdbi version 1.64.1-1 1207s autopkgtest [01:11:43]: build not needed 1209s autopkgtest [01:11:45]: test pkg-r-autopkgtest: preparing testbed 1214s Note, using file '/tmp/autopkgtest.OBtp3C/1-autopkgtest-satdep.dsc' to get the build dependencies 1214s Reading package lists... 1214s Building dependency tree... 1214s Reading state information... 1214s Starting pkgProblemResolver with broken count: 0 1214s Starting 2 pkgProblemResolver with broken count: 0 1214s Done 1214s The following NEW packages will be installed: 1214s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 1214s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1214s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 1214s g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 1214s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13 1214s gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 1214s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 1214s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 1214s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 1214s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 1214s libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 1214s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 1214s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 1214s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 1214s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 1214s libjs-popper.js libjs-prettify libjs-sifter.js 1214s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 1214s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 1214s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 1214s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 1214s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 1214s libpotrace0 libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 libsm6 1214s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 1214s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 1214s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 1215s libxss1 libxt6 libzzip-0-13 linux-libc-dev littler node-bootstrap-sass 1215s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 1215s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 1215s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biocstyle 1215s r-bioc-biostrings r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-go.db 1215s r-bioc-graph r-bioc-iranges r-bioc-keggrest r-bioc-org.hs.eg.db 1215s r-bioc-s4vectors r-bioc-xvector r-bioc-zlibbioc r-cran-askpass 1215s r-cran-base64enc r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 1215s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 1215s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 1215s r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fastmap 1215s r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools 1215s r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr 1215s r-cran-later r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise 1215s r-cran-mime r-cran-openssl r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 1215s r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcpp 1215s r-cran-rcurl r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 1215s r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr 1215s r-cran-sys r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun 1215s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 1215s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 1215s xdg-utils zip zlib1g-dev 1215s 0 upgraded, 233 newly installed, 0 to remove and 0 not upgraded. 1215s Need to get 453 MB of archives. 1215s After this operation, 1585 MB of additional disk space will be used. 1215s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 1215s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 1215s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 1215s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 1215s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 1215s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 1215s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 1215s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 1215s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 1215s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 1215s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 1215s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 1215s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 1215s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 1215s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 1215s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 1215s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 1215s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 1215s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 1215s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 1215s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 1215s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 1215s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 1215s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 1215s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 1215s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 1215s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 1215s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 1215s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 1215s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 1215s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 1215s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 1215s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 1215s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 1215s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 1215s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 1215s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 1215s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 1215s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 1215s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 1215s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 1215s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1215s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 1215s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 1215s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 1215s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 1215s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 1215s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 1215s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 1215s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 1215s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 1215s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 javascript-common all 11+nmu1 [5936 B] 1215s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 1215s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 1215s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 1215s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 1215s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 1215s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 1215s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 1215s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 1215s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 1215s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 1215s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 1215s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 1215s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 1215s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 1215s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 1215s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 1215s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 1215s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 1215s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 1215s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 1215s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 1215s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 1215s Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 1215s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1215s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 1215s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 1215s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 1215s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 1215s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 1215s Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1215s Get:83 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 1215s Get:84 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 1215s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 1215s Get:86 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 1215s Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 1215s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 1215s Get:89 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 1215s Get:90 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 1215s Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 libkpathsea6 amd64 2023.20230311.66589-9 [62.9 kB] 1215s Get:92 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 1215s Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 1215s Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 1215s Get:95 http://ftpmaster.internal/ubuntu noble/main amd64 liblua5.4-0 amd64 5.4.6-3 [166 kB] 1215s Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 1215s Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 1215s Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 1215s Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 1215s Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 1215s Get:101 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 1215s Get:102 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 1215s Get:103 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 1215s Get:104 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 1215s Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 1215s Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 1215s Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 1215s Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 1215s Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 1216s Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 1216s Get:111 http://ftpmaster.internal/ubuntu noble/universe amd64 libpotrace0 amd64 1.16-2 [17.2 kB] 1216s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libptexenc1 amd64 2023.20230311.66589-9 [40.4 kB] 1216s Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 1216s Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 1216s Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 1216s Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libsynctex2 amd64 2023.20230311.66589-9 [59.5 kB] 1216s Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 1216s Get:118 http://ftpmaster.internal/ubuntu noble/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 1216s Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 libtexlua53-5 amd64 2023.20230311.66589-9 [122 kB] 1216s Get:120 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 1216s Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 1216s Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 1216s Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 1216s Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 1216s Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] 1216s Get:126 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 1216s Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libxmu6 amd64 2:1.1.3-3 [49.6 kB] 1216s Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libxpm4 amd64 1:3.5.17-1 [35.9 kB] 1216s Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 libxaw7 amd64 2:1.0.14-1 [191 kB] 1216s Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 libxi6 amd64 2:1.8.1-1 [32.4 kB] 1216s Get:131 http://ftpmaster.internal/ubuntu noble/universe amd64 libzzip-0-13 amd64 0.13.72+dfsg.1-1.1 [27.0 kB] 1216s Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 1216s Get:133 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 1216s Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 1216s Get:135 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 1216s Get:136 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 1216s Get:137 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 1216s Get:138 http://ftpmaster.internal/ubuntu noble/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 1216s Get:139 http://ftpmaster.internal/ubuntu noble/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 1216s Get:140 http://ftpmaster.internal/ubuntu noble/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 1216s Get:141 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc-data all 3.1.3-1 [92.4 kB] 1216s Get:142 http://ftpmaster.internal/ubuntu noble/universe amd64 pandoc amd64 3.1.3+ds-2 [26.9 MB] 1216s Get:143 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 1216s Get:144 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 1216s Get:145 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 1216s Get:146 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 1216s Get:147 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 1216s Get:148 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1216s Get:149 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 1216s Get:150 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biobase amd64 2.62.0-1 [2136 kB] 1216s Get:151 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4vectors amd64 0.40.2+dfsg-1 [2056 kB] 1216s Get:152 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-iranges amd64 2.36.0-1 [2252 kB] 1216s Get:153 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-dbi all 1.2.2-1 [823 kB] 1216s Get:154 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 1216s Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 1216s Get:156 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 1216s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 1216s Get:158 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 1216s Get:159 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1216s Get:160 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 1216s Get:161 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-blob all 1.2.4-1 [49.8 kB] 1216s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 1216s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 1216s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 1216s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1216s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 1216s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 1216s Get:168 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rsqlite amd64 2.3.4-1 [1364 kB] 1216s Get:169 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-curl amd64 5.2.0+dfsg-1 [188 kB] 1216s Get:170 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 1216s Get:171 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mime amd64 0.12-1 [35.8 kB] 1216s Get:172 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 1216s Get:173 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 1216s Get:174 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-openssl amd64 2.1.1+dfsg-2 [402 kB] 1216s Get:175 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 1216s Get:176 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1216s Get:177 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-png amd64 0.1-8-1 [40.5 kB] 1216s Get:178 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 1216s Get:179 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-xvector amd64 0.42.0-1 [621 kB] 1216s Get:180 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 1216s Get:181 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1 [793 kB] 1216s Get:182 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 1216s Get:183 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 1216s Get:184 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 1216s Get:185 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biostrings amd64 2.70.2+dfsg-1 [13.6 MB] 1216s Get:186 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 1216s Get:187 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 1216s Get:188 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 1216s Get:189 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-digest amd64 0.6.34-1 [186 kB] 1216s Get:190 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 1216s Get:191 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-htmltools amd64 0.5.7-1 [369 kB] 1216s Get:192 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-evaluate all 0.23-1 [90.2 kB] 1216s Get:193 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xfun amd64 0.41+dfsg-1 [415 kB] 1216s Get:194 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 1216s Get:195 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-yaml amd64 2.3.8-1 [108 kB] 1216s Get:196 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1216s Get:197 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 1216s Get:198 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 1216s Get:199 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fs amd64 1.6.3+dfsg-1 [229 kB] 1216s Get:200 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 1216s Get:201 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sass amd64 0.4.8+dfsg-1 [996 kB] 1216s Get:202 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 1216s Get:203 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 1216s Get:204 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 1216s Get:205 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 1216s Get:206 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 1217s Get:207 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tinytex all 0.49-1 [141 kB] 1217s Get:208 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 1217s Get:209 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 1217s Get:210 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 1217s Get:211 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 1217s Get:212 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-promises amd64 1.2.1+dfsg-1 [284 kB] 1217s Get:213 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-httpuv amd64 1.6.14+dfsg-1 [510 kB] 1217s Get:214 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 1217s Get:215 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 1217s Get:216 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 1217s Get:217 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 1217s Get:218 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 1217s Get:219 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 1217s Get:220 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 1217s Get:221 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 1217s Get:222 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 1217s Get:223 http://ftpmaster.internal/ubuntu noble/universe amd64 tex-common all 6.18 [32.8 kB] 1217s Get:224 http://ftpmaster.internal/ubuntu noble/main amd64 t1utils amd64 1.41-4build2 [61.3 kB] 1217s Get:225 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-binaries amd64 2023.20230311.66589-9 [8529 kB] 1217s Get:226 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-base all 2023.20240207-1 [21.7 MB] 1217s Get:227 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-latex-base all 2023.20240207-1 [1238 kB] 1217s Get:228 http://ftpmaster.internal/ubuntu noble/universe amd64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 1218s Get:229 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 1218s Get:230 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-go.db all 3.18.0-1 [18.7 MB] 1218s Get:231 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-graph amd64 1.80.0-1 [1289 kB] 1218s Get:232 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 1218s Get:233 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 1219s Preconfiguring packages ... 1219s Fetched 453 MB in 4s (117 MB/s) 1219s Selecting previously unselected package libc-dev-bin. 1219s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 1219s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 1219s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 1219s Selecting previously unselected package linux-libc-dev:amd64. 1219s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 1219s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 1220s Selecting previously unselected package libcrypt-dev:amd64. 1220s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 1220s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 1220s Selecting previously unselected package libtirpc-dev:amd64. 1220s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 1220s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 1220s Selecting previously unselected package libnsl-dev:amd64. 1220s Preparing to unpack .../004-libnsl-dev_1.3.0-3_amd64.deb ... 1220s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 1220s Selecting previously unselected package rpcsvc-proto. 1220s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 1220s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 1220s Selecting previously unselected package libc6-dev:amd64. 1220s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_amd64.deb ... 1220s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 1220s Selecting previously unselected package libisl23:amd64. 1220s Preparing to unpack .../007-libisl23_0.26-3_amd64.deb ... 1220s Unpacking libisl23:amd64 (0.26-3) ... 1220s Selecting previously unselected package libmpc3:amd64. 1220s Preparing to unpack .../008-libmpc3_1.3.1-1_amd64.deb ... 1220s Unpacking libmpc3:amd64 (1.3.1-1) ... 1220s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 1220s Preparing to unpack .../009-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1220s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1220s Selecting previously unselected package cpp-13. 1220s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 1220s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 1220s Selecting previously unselected package cpp-x86-64-linux-gnu. 1220s Preparing to unpack .../011-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1220s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1220s Selecting previously unselected package cpp. 1220s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 1220s Unpacking cpp (4:13.2.0-7ubuntu1) ... 1220s Selecting previously unselected package libcc1-0:amd64. 1220s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 1220s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 1220s Selecting previously unselected package libgomp1:amd64. 1220s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 1220s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 1220s Selecting previously unselected package libitm1:amd64. 1220s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_amd64.deb ... 1220s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 1220s Selecting previously unselected package libatomic1:amd64. 1220s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 1220s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 1220s Selecting previously unselected package libasan8:amd64. 1220s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_amd64.deb ... 1220s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 1221s Selecting previously unselected package liblsan0:amd64. 1221s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 1221s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 1221s Selecting previously unselected package libtsan2:amd64. 1221s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 1221s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 1221s Selecting previously unselected package libubsan1:amd64. 1221s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 1221s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 1221s Selecting previously unselected package libhwasan0:amd64. 1221s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 1221s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 1221s Selecting previously unselected package libquadmath0:amd64. 1221s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 1221s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 1221s Selecting previously unselected package libgcc-13-dev:amd64. 1221s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1221s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 1221s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 1221s Preparing to unpack .../024-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1221s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1221s Selecting previously unselected package gcc-13. 1221s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 1221s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 1221s Selecting previously unselected package gcc-x86-64-linux-gnu. 1221s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1221s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1221s Selecting previously unselected package gcc. 1221s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 1221s Unpacking gcc (4:13.2.0-7ubuntu1) ... 1221s Selecting previously unselected package libstdc++-13-dev:amd64. 1221s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1221s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 1222s Selecting previously unselected package g++-13-x86-64-linux-gnu. 1222s Preparing to unpack .../029-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1222s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1222s Selecting previously unselected package g++-13. 1222s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_amd64.deb ... 1222s Unpacking g++-13 (13.2.0-17ubuntu2) ... 1222s Selecting previously unselected package g++-x86-64-linux-gnu. 1222s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1222s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1222s Selecting previously unselected package g++. 1222s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 1222s Unpacking g++ (4:13.2.0-7ubuntu1) ... 1222s Selecting previously unselected package build-essential. 1222s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 1222s Unpacking build-essential (12.10ubuntu1) ... 1222s Selecting previously unselected package dctrl-tools. 1222s Preparing to unpack .../034-dctrl-tools_2.24-3build2_amd64.deb ... 1222s Unpacking dctrl-tools (2.24-3build2) ... 1222s Selecting previously unselected package fonts-dejavu-mono. 1222s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 1222s Unpacking fonts-dejavu-mono (2.37-8) ... 1222s Selecting previously unselected package fonts-dejavu-core. 1222s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 1222s Unpacking fonts-dejavu-core (2.37-8) ... 1222s Selecting previously unselected package fontconfig-config. 1222s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 1222s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 1222s Selecting previously unselected package libfontconfig1:amd64. 1222s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 1222s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 1222s Selecting previously unselected package fontconfig. 1222s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 1222s Unpacking fontconfig (2.15.0-1ubuntu1) ... 1222s Selecting previously unselected package fonts-font-awesome. 1222s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 1222s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1222s Selecting previously unselected package fonts-glyphicons-halflings. 1222s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1222s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1222s Selecting previously unselected package fonts-lmodern. 1222s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 1222s Unpacking fonts-lmodern (2.005-1) ... 1223s Selecting previously unselected package fonts-mathjax. 1223s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1223s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1223s Selecting previously unselected package libgfortran5:amd64. 1223s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 1223s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 1223s Selecting previously unselected package libgfortran-13-dev:amd64. 1223s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1223s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 1223s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 1223s Preparing to unpack .../046-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1223s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1223s Selecting previously unselected package gfortran-13. 1223s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 1223s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 1223s Selecting previously unselected package gfortran-x86-64-linux-gnu. 1223s Preparing to unpack .../048-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1223s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1223s Selecting previously unselected package gfortran. 1223s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 1223s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 1223s Selecting previously unselected package icu-devtools. 1223s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_amd64.deb ... 1223s Unpacking icu-devtools (74.2-1ubuntu1) ... 1223s Selecting previously unselected package javascript-common. 1223s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 1223s Unpacking javascript-common (11+nmu1) ... 1223s Selecting previously unselected package libio-string-perl. 1223s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 1223s Unpacking libio-string-perl (1.08-4) ... 1223s Selecting previously unselected package liblatex-tounicode-perl. 1223s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 1223s Unpacking liblatex-tounicode-perl (0.54-2) ... 1223s Selecting previously unselected package libbibtex-parser-perl. 1223s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 1223s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 1223s Selecting previously unselected package libblas3:amd64. 1223s Preparing to unpack .../055-libblas3_3.12.0-3_amd64.deb ... 1223s Unpacking libblas3:amd64 (3.12.0-3) ... 1223s Selecting previously unselected package libblas-dev:amd64. 1223s Preparing to unpack .../056-libblas-dev_3.12.0-3_amd64.deb ... 1223s Unpacking libblas-dev:amd64 (3.12.0-3) ... 1224s Selecting previously unselected package libbz2-dev:amd64. 1224s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 1224s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 1224s Selecting previously unselected package libpixman-1-0:amd64. 1224s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_amd64.deb ... 1224s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 1224s Selecting previously unselected package libxcb-render0:amd64. 1224s Preparing to unpack .../059-libxcb-render0_1.15-1_amd64.deb ... 1224s Unpacking libxcb-render0:amd64 (1.15-1) ... 1224s Selecting previously unselected package libxcb-shm0:amd64. 1224s Preparing to unpack .../060-libxcb-shm0_1.15-1_amd64.deb ... 1224s Unpacking libxcb-shm0:amd64 (1.15-1) ... 1224s Selecting previously unselected package libxrender1:amd64. 1224s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 1224s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 1224s Selecting previously unselected package libcairo2:amd64. 1224s Preparing to unpack .../062-libcairo2_1.18.0-1_amd64.deb ... 1224s Unpacking libcairo2:amd64 (1.18.0-1) ... 1224s Selecting previously unselected package libdatrie1:amd64. 1224s Preparing to unpack .../063-libdatrie1_0.2.13-3_amd64.deb ... 1224s Unpacking libdatrie1:amd64 (0.2.13-3) ... 1224s Selecting previously unselected package libdeflate0:amd64. 1224s Preparing to unpack .../064-libdeflate0_1.19-1_amd64.deb ... 1224s Unpacking libdeflate0:amd64 (1.19-1) ... 1224s Selecting previously unselected package libgraphite2-3:amd64. 1224s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_amd64.deb ... 1224s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 1224s Selecting previously unselected package libharfbuzz0b:amd64. 1224s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_amd64.deb ... 1224s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 1224s Selecting previously unselected package x11-common. 1224s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 1224s Unpacking x11-common (1:7.7+23ubuntu2) ... 1224s Selecting previously unselected package libice6:amd64. 1224s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_amd64.deb ... 1224s Unpacking libice6:amd64 (2:1.0.10-1build2) ... 1224s Selecting previously unselected package libicu-dev:amd64. 1224s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_amd64.deb ... 1224s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ... 1224s Selecting previously unselected package libjpeg-turbo8:amd64. 1224s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 1224s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 1224s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 1224s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ... 1224s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 1224s Selecting previously unselected package libjpeg8:amd64. 1224s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_amd64.deb ... 1224s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 1224s Selecting previously unselected package libjpeg8-dev:amd64. 1224s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 1224s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 1224s Selecting previously unselected package libjpeg-dev:amd64. 1224s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 1224s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 1224s Selecting previously unselected package libjs-bootstrap. 1224s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1224s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1224s Selecting previously unselected package libjs-popper.js. 1224s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 1224s Unpacking libjs-popper.js (1.16.1+ds-6) ... 1224s Selecting previously unselected package libjs-bootstrap4. 1224s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 1224s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1224s Selecting previously unselected package libjs-d3. 1224s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 1224s Unpacking libjs-d3 (3.5.17-4) ... 1224s Selecting previously unselected package libjs-es5-shim. 1224s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 1224s Unpacking libjs-es5-shim (4.6.7-2) ... 1225s Selecting previously unselected package libjs-highlight.js. 1225s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 1225s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 1225s Selecting previously unselected package libjs-jquery. 1225s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1225s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1225s Selecting previously unselected package libjs-jquery-datatables. 1225s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 1225s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 1225s Selecting previously unselected package libjs-sifter.js. 1225s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1225s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1225s Selecting previously unselected package libjs-microplugin.js. 1225s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 1225s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1225s Selecting previously unselected package libjs-jquery-selectize.js. 1225s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1225s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1225s Selecting previously unselected package libjs-jquery-ui. 1225s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 1225s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 1225s Selecting previously unselected package libjs-json. 1225s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 1225s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 1225s Selecting previously unselected package libjs-lunr. 1225s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ... 1225s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 1225s Selecting previously unselected package libjs-prettify. 1225s Preparing to unpack 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libxt6:amd64 (1:1.2.1-1.1) ... 1226s Selecting previously unselected package libxmu6:amd64. 1226s Preparing to unpack .../126-libxmu6_2%3a1.1.3-3_amd64.deb ... 1226s Unpacking libxmu6:amd64 (2:1.1.3-3) ... 1226s Selecting previously unselected package libxpm4:amd64. 1226s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1_amd64.deb ... 1226s Unpacking libxpm4:amd64 (1:3.5.17-1) ... 1226s Selecting previously unselected package libxaw7:amd64. 1226s Preparing to unpack .../128-libxaw7_2%3a1.0.14-1_amd64.deb ... 1226s Unpacking libxaw7:amd64 (2:1.0.14-1) ... 1226s Selecting previously unselected package libxi6:amd64. 1227s Preparing to unpack .../129-libxi6_2%3a1.8.1-1_amd64.deb ... 1227s Unpacking libxi6:amd64 (2:1.8.1-1) ... 1227s Selecting previously unselected package libzzip-0-13:amd64. 1227s Preparing to unpack .../130-libzzip-0-13_0.13.72+dfsg.1-1.1_amd64.deb ... 1227s Unpacking libzzip-0-13:amd64 (0.13.72+dfsg.1-1.1) ... 1227s Selecting previously unselected package zip. 1227s Preparing to unpack .../131-zip_3.0-13_amd64.deb ... 1227s Unpacking zip (3.0-13) ... 1227s Selecting previously unselected package unzip. 1227s Preparing to unpack .../132-unzip_6.0-28ubuntu3_amd64.deb ... 1227s Unpacking unzip (6.0-28ubuntu3) ... 1227s Selecting previously unselected package xdg-utils. 1227s Preparing to unpack .../133-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 1227s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 1227s Selecting previously unselected package r-base-core. 1227s Preparing to unpack .../134-r-base-core_4.3.2-1build1_amd64.deb ... 1227s Unpacking r-base-core (4.3.2-1build1) ... 1227s Selecting previously unselected package r-cran-littler. 1227s Preparing to unpack .../135-r-cran-littler_0.3.19-1_amd64.deb ... 1227s Unpacking r-cran-littler (0.3.19-1) ... 1227s Selecting previously unselected package littler. 1227s Preparing to unpack .../136-littler_0.3.19-1_all.deb ... 1227s Unpacking littler (0.3.19-1) ... 1227s Selecting previously unselected package node-bootstrap-sass. 1227s Preparing to unpack .../137-node-bootstrap-sass_3.4.3-2_all.deb ... 1227s Unpacking node-bootstrap-sass (3.4.3-2) ... 1227s Selecting previously unselected package node-html5shiv. 1227s Preparing to unpack .../138-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1227s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1227s Selecting previously unselected package node-normalize.css. 1227s Preparing to unpack .../139-node-normalize.css_8.0.1-5_all.deb ... 1227s Unpacking node-normalize.css (8.0.1-5) ... 1227s Selecting previously unselected package pandoc-data. 1227s Preparing to unpack .../140-pandoc-data_3.1.3-1_all.deb ... 1227s Unpacking pandoc-data (3.1.3-1) ... 1227s Selecting previously unselected package pandoc. 1227s Preparing to unpack .../141-pandoc_3.1.3+ds-2_amd64.deb ... 1227s Unpacking pandoc (3.1.3+ds-2) ... 1228s Selecting previously unselected package pkgconf-bin. 1228s Preparing to unpack .../142-pkgconf-bin_1.8.1-2_amd64.deb ... 1228s Unpacking pkgconf-bin 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Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 1228s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 1228s Selecting previously unselected package r-bioc-biobase. 1228s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_amd64.deb ... 1228s Unpacking r-bioc-biobase (2.62.0-1) ... 1228s Selecting previously unselected package r-bioc-s4vectors. 1228s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_amd64.deb ... 1228s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 1229s Selecting previously unselected package r-bioc-iranges. 1229s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_amd64.deb ... 1229s Unpacking r-bioc-iranges (2.36.0-1) ... 1229s Selecting previously unselected package r-cran-dbi. 1229s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 1229s Unpacking r-cran-dbi (1.2.2-1) ... 1229s Selecting previously unselected package r-cran-bit. 1229s Preparing to unpack .../153-r-cran-bit_4.0.5-1_amd64.deb ... 1229s Unpacking r-cran-bit 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previously unselected package r-cran-plogr. 1229s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 1229s Unpacking r-cran-plogr (0.2.0-3build1) ... 1229s Selecting previously unselected package r-cran-cpp11. 1229s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 1229s Unpacking r-cran-cpp11 (0.4.7-1) ... 1229s Selecting previously unselected package r-cran-rsqlite. 1229s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_amd64.deb ... 1229s Unpacking r-cran-rsqlite (2.3.4-1) ... 1229s Selecting previously unselected package r-cran-curl. 1229s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_amd64.deb ... 1229s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 1229s Selecting previously unselected package r-cran-jsonlite. 1229s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 1229s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 1229s Selecting previously unselected package r-cran-mime. 1229s Preparing to unpack .../170-r-cran-mime_0.12-1_amd64.deb ... 1229s Unpacking r-cran-mime (0.12-1) ... 1230s Selecting previously unselected package r-cran-sys. 1230s Preparing to unpack .../171-r-cran-sys_3.4.2-1_amd64.deb ... 1230s Unpacking r-cran-sys (3.4.2-1) ... 1230s Selecting previously unselected package r-cran-askpass. 1230s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_amd64.deb ... 1230s Unpacking r-cran-askpass (1.2.0-1) ... 1230s Selecting previously unselected package r-cran-openssl. 1230s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_amd64.deb ... 1230s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 1230s Selecting previously unselected package r-cran-r6. 1230s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 1230s Unpacking r-cran-r6 (2.5.1-1) ... 1230s Selecting previously unselected package r-cran-httr. 1230s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1230s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1230s Selecting previously unselected package r-cran-png. 1230s Preparing to unpack .../176-r-cran-png_0.1-8-1_amd64.deb ... 1230s Unpacking r-cran-png (0.1-8-1) ... 1230s Selecting previously unselected package r-bioc-zlibbioc. 1230s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 1230s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 1230s Selecting previously unselected package r-bioc-xvector. 1230s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_amd64.deb ... 1230s Unpacking r-bioc-xvector (0.42.0-1) ... 1230s Selecting previously unselected package r-cran-bitops. 1230s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_amd64.deb ... 1230s Unpacking r-cran-bitops (1.0-7-1) ... 1230s Selecting previously unselected package r-cran-rcurl. 1230s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_amd64.deb ... 1230s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 1230s Selecting previously unselected package r-bioc-genomeinfodbdata. 1230s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 1230s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 1230s Selecting previously unselected package r-bioc-genomeinfodb. 1230s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 1230s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 1230s Selecting previously unselected package r-cran-crayon. 1230s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 1230s Unpacking r-cran-crayon (1.5.2-1) ... 1230s Selecting previously unselected package r-bioc-biostrings. 1230s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_amd64.deb ... 1230s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 1230s Selecting previously unselected package r-bioc-keggrest. 1230s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 1230s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 1230s Selecting previously unselected package r-bioc-annotationdbi. 1230s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 1230s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 1230s Selecting previously unselected package r-cran-base64enc. 1230s Preparing to unpack .../187-r-cran-base64enc_0.1-3-3_amd64.deb ... 1230s Unpacking r-cran-base64enc (0.1-3-3) ... 1230s Selecting previously unselected package r-cran-digest. 1230s Preparing to unpack .../188-r-cran-digest_0.6.34-1_amd64.deb ... 1230s Unpacking r-cran-digest (0.6.34-1) ... 1230s Selecting previously unselected package r-cran-ellipsis. 1230s Preparing to unpack .../189-r-cran-ellipsis_0.3.2-2_amd64.deb ... 1230s Unpacking r-cran-ellipsis (0.3.2-2) ... 1230s Selecting previously unselected package r-cran-htmltools. 1230s Preparing to unpack .../190-r-cran-htmltools_0.5.7-1_amd64.deb ... 1230s Unpacking r-cran-htmltools (0.5.7-1) ... 1231s Selecting previously unselected package r-cran-evaluate. 1231s Preparing to unpack .../191-r-cran-evaluate_0.23-1_all.deb ... 1231s Unpacking r-cran-evaluate (0.23-1) ... 1231s Selecting previously unselected package r-cran-xfun. 1231s Preparing to unpack .../192-r-cran-xfun_0.41+dfsg-1_amd64.deb ... 1231s Unpacking r-cran-xfun (0.41+dfsg-1) ... 1231s Selecting previously unselected package r-cran-highr. 1231s Preparing to unpack .../193-r-cran-highr_0.10+dfsg-1_all.deb ... 1231s Unpacking r-cran-highr (0.10+dfsg-1) ... 1231s Selecting previously unselected package r-cran-yaml. 1231s Preparing to unpack .../194-r-cran-yaml_2.3.8-1_amd64.deb ... 1231s Unpacking r-cran-yaml (2.3.8-1) ... 1231s Selecting previously unselected package libjs-mathjax. 1231s Preparing to unpack .../195-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1231s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1232s Selecting previously unselected package r-cran-knitr. 1232s Preparing to unpack .../196-r-cran-knitr_1.45+dfsg-1_all.deb ... 1232s Unpacking r-cran-knitr (1.45+dfsg-1) ... 1232s Selecting previously unselected package r-cran-jquerylib. 1232s Preparing to unpack .../197-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 1232s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 1232s Selecting previously unselected package r-cran-fs. 1232s Preparing to unpack .../198-r-cran-fs_1.6.3+dfsg-1_amd64.deb ... 1232s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 1232s Selecting previously unselected package r-cran-rappdirs. 1232s Preparing to unpack .../199-r-cran-rappdirs_0.3.3-1_amd64.deb ... 1232s Unpacking r-cran-rappdirs (0.3.3-1) ... 1232s Selecting previously unselected package r-cran-sass. 1232s Preparing to unpack .../200-r-cran-sass_0.4.8+dfsg-1_amd64.deb ... 1232s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 1232s Selecting previously unselected package r-cran-bslib. 1232s Preparing to unpack .../201-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 1232s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 1232s Selecting previously unselected package r-cran-fontawesome. 1232s Preparing to unpack .../202-r-cran-fontawesome_0.5.2-1_all.deb ... 1232s Unpacking r-cran-fontawesome (0.5.2-1) ... 1232s Selecting previously unselected package r-cran-magrittr. 1232s Preparing to unpack .../203-r-cran-magrittr_2.0.3-1_amd64.deb ... 1232s Unpacking r-cran-magrittr (2.0.3-1) ... 1232s Selecting previously unselected package r-cran-stringi. 1232s Preparing to unpack .../204-r-cran-stringi_1.8.3-1_amd64.deb ... 1232s Unpacking r-cran-stringi (1.8.3-1) ... 1232s Selecting previously unselected package r-cran-stringr. 1232s Preparing to unpack .../205-r-cran-stringr_1.5.1-1_all.deb ... 1232s Unpacking r-cran-stringr (1.5.1-1) ... 1232s Selecting previously unselected package r-cran-tinytex. 1232s Preparing to unpack .../206-r-cran-tinytex_0.49-1_all.deb ... 1232s Unpacking r-cran-tinytex (0.49-1) ... 1232s Selecting previously unselected package libjs-modernizr. 1232s Preparing to unpack .../207-libjs-modernizr_2.6.2+ds1-5_all.deb ... 1232s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 1232s Selecting previously unselected package r-cran-pkgkitten. 1232s Preparing to unpack .../208-r-cran-pkgkitten_0.2.3-1_all.deb ... 1232s Unpacking r-cran-pkgkitten (0.2.3-1) ... 1232s Selecting previously unselected package r-cran-rcpp. 1232s Preparing to unpack .../209-r-cran-rcpp_1.0.12-1_amd64.deb ... 1232s Unpacking r-cran-rcpp (1.0.12-1) ... 1232s Selecting previously unselected package r-cran-later. 1232s Preparing to unpack .../210-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 1232s Unpacking r-cran-later (1.3.2+dfsg-1) ... 1232s Selecting previously unselected package r-cran-promises. 1232s Preparing to unpack .../211-r-cran-promises_1.2.1+dfsg-1_amd64.deb ... 1232s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 1232s Selecting previously unselected package r-cran-httpuv. 1232s Preparing to unpack .../212-r-cran-httpuv_1.6.14+dfsg-1_amd64.deb ... 1232s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 1232s Selecting previously unselected package r-cran-xtable. 1233s Preparing to unpack .../213-r-cran-xtable_1%3a1.8-4-2_all.deb ... 1233s Unpacking r-cran-xtable (1:1.8-4-2) ... 1233s Selecting previously unselected package r-cran-sourcetools. 1233s Preparing to unpack .../214-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 1233s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1233s Selecting previously unselected package r-cran-withr. 1233s Preparing to unpack .../215-r-cran-withr_2.5.0-1_all.deb ... 1233s Unpacking r-cran-withr (2.5.0-1) ... 1233s Selecting previously unselected package r-cran-commonmark. 1233s Preparing to unpack .../216-r-cran-commonmark_1.9.1-1_amd64.deb ... 1233s Unpacking r-cran-commonmark (1.9.1-1) ... 1233s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1233s Preparing to unpack .../217-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1233s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1233s Selecting previously unselected package r-cran-shiny. 1233s Preparing to unpack .../218-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 1233s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 1233s Selecting previously unselected package r-cran-rmarkdown. 1233s Preparing to unpack .../219-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 1233s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 1233s Selecting previously unselected package r-cran-bookdown. 1233s Preparing to unpack .../220-r-cran-bookdown_0.37+dfsg-1_all.deb ... 1233s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 1233s Selecting previously unselected package r-cran-biocmanager. 1233s Preparing to unpack .../221-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 1233s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 1233s Selecting previously unselected package tex-common. 1233s Preparing to unpack .../222-tex-common_6.18_all.deb ... 1233s Unpacking tex-common (6.18) ... 1233s Selecting previously unselected package t1utils. 1233s Preparing to unpack .../223-t1utils_1.41-4build2_amd64.deb ... 1233s Unpacking t1utils (1.41-4build2) ... 1233s Selecting previously unselected package texlive-binaries. 1233s Preparing to unpack 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unpack .../229-r-bioc-go.db_3.18.0-1_all.deb ... 1239s Unpacking r-bioc-go.db (3.18.0-1) ... 1239s Selecting previously unselected package r-bioc-graph. 1239s Preparing to unpack .../230-r-bioc-graph_1.80.0-1_amd64.deb ... 1239s Unpacking r-bioc-graph (1.80.0-1) ... 1239s Selecting previously unselected package r-bioc-org.hs.eg.db. 1239s Preparing to unpack .../231-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 1239s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 1241s Selecting previously unselected package r-cran-runit. 1241s Preparing to unpack .../232-r-cran-runit_0.4.33-1_all.deb ... 1241s Unpacking r-cran-runit (0.4.33-1) ... 1241s Setting up libjs-json (0~20221030+~1.0.8-1) ... 1241s Setting up javascript-common (11+nmu1) ... 1241s Setting up libgraphite2-3:amd64 (1.3.14-2) ... 1241s Setting up libpixman-1-0:amd64 (0.42.2-1) ... 1241s Setting up libsharpyuv0:amd64 (1.3.2-0.4) ... 1241s Setting up libpaper1:amd64 (1.1.29) ... 1241s 1241s Creating config file /etc/papersize with new 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libc-dev-bin (2.39-0ubuntu2) ... 1242s Setting up node-normalize.css (8.0.1-5) ... 1242s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1242s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 1242s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 1242s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 1242s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 1242s Setting up libblas-dev:amd64 (3.12.0-3) ... 1242s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 1242s Setting up dctrl-tools (2.24-3build2) ... 1242s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 1242s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 1242s Setting up libsynctex2:amd64 (2023.20230311.66589-9) ... 1242s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1242s Setting up libpotrace0:amd64 (1.16-2) ... 1242s Setting up libjpeg8:amd64 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provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 1242s Setting up pkg-config:amd64 (1.8.1-2) ... 1242s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 1242s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 1242s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 1242s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 1242s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 1242s Setting up libsm6:amd64 (2:1.2.3-1build2) ... 1242s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ... 1242s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 1242s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 1242s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1242s Setting up fontconfig (2.15.0-1ubuntu1) ... 1244s Regenerating fonts cache... done. 1244s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 1244s Setting up libxft2:amd64 (2.3.6-1) ... 1244s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 1244s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ... 1244s Setting up cpp-13 (13.2.0-17ubuntu2) ... 1244s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1244s Setting up libtk8.6:amd64 (8.6.13-2) ... 1244s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ... 1244s Setting up libreadline-dev:amd64 (8.2-3) ... 1244s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1244s Setting up libcairo2:amd64 (1.18.0-1) ... 1244s Setting up gcc-13 (13.2.0-17ubuntu2) ... 1244s Setting up libxt6:amd64 (1:1.2.1-1.1) ... 1244s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 1244s Setting up cpp (4:13.2.0-7ubuntu1) ... 1244s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 1244s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 1244s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 1244s Setting up libxmu6:amd64 (2:1.1.3-3) ... 1244s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1244s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1244s Setting up libpng-dev:amd64 (1.6.43-1) ... 1244s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 1244s Setting up libxaw7:amd64 (2:1.0.14-1) ... 1244s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1244s Setting up gcc (4:13.2.0-7ubuntu1) ... 1244s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 1244s Setting up r-base-core (4.3.2-1build1) ... 1244s 1244s Creating config file /etc/R/Renviron with new version 1244s Setting up r-cran-crayon (1.5.2-1) ... 1244s Setting up r-cran-sourcetools (0.1.7-1-1) ... 1244s Setting up texlive-binaries (2023.20230311.66589-9) ... 1244s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 1244s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 1244s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1244s Setting up r-cran-commonmark (1.9.1-1) ... 1244s Setting up r-cran-r6 (2.5.1-1) ... 1244s Setting up r-cran-pkgkitten (0.2.3-1) ... 1244s Setting up texlive-base (2023.20240207-1) ... 1245s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 1245s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 1245s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 1246s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 1246s Setting up r-cran-magrittr (2.0.3-1) ... 1246s Setting up r-cran-rappdirs (0.3.3-1) ... 1246s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 1246s Setting up r-cran-littler (0.3.19-1) ... 1246s Setting up r-cran-fs (1.6.3+dfsg-1) ... 1246s Setting up r-cran-rcpp (1.0.12-1) ... 1246s Setting up r-cran-curl (5.2.0+dfsg-1) ... 1246s Setting up g++-13 (13.2.0-17ubuntu2) ... 1246s Setting up r-bioc-biocgenerics (0.48.1-2) ... 1246s Setting up r-cran-rlang (1.1.3-1) ... 1246s Setting up littler (0.3.19-1) ... 1246s Setting up r-cran-xfun (0.41+dfsg-1) ... 1246s Setting up r-cran-sys (3.4.2-1) ... 1246s Setting up r-cran-plogr (0.2.0-3build1) ... 1246s Setting up r-cran-withr (2.5.0-1) ... 1246s Setting up r-cran-mime (0.12-1) ... 1246s Setting up r-cran-base64enc (0.1-3-3) ... 1246s Setting up r-cran-digest (0.6.34-1) ... 1246s Setting up r-cran-yaml (2.3.8-1) ... 1246s Setting up r-cran-evaluate (0.23-1) ... 1246s Setting up r-cran-dbi (1.2.2-1) ... 1246s Setting up r-cran-highr (0.10+dfsg-1) ... 1246s Setting up r-cran-glue (1.7.0-1) ... 1246s Setting up r-cran-bit (4.0.5-1) ... 1246s Setting up r-cran-xtable (1:1.8-4-2) ... 1246s Setting up r-cran-cli (3.6.2-1) ... 1246s Setting up gfortran (4:13.2.0-7ubuntu1) ... 1246s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1246s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1246s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1246s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1246s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 1246s Setting up r-cran-bitops (1.0-7-1) ... 1246s Setting up r-cran-bit64 (4.0.5-1) ... 1246s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 1246s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 1246s Setting up r-cran-askpass (1.2.0-1) ... 1246s Setting up r-cran-fastmap (1.1.1-1) ... 1246s Setting up r-cran-png (0.1-8-1) ... 1246s Setting up r-bioc-biobase (2.62.0-1) ... 1246s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 1246s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 1246s Setting up r-cran-stringi (1.8.3-1) ... 1246s Setting up texlive-latex-base (2023.20240207-1) ... 1246s Setting up r-cran-cpp11 (0.4.7-1) ... 1246s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 1246s Setting up r-cran-runit (0.4.33-1) ... 1246s Setting up r-cran-later (1.3.2+dfsg-1) ... 1246s Setting up r-cran-tinytex (0.49-1) ... 1246s Setting up r-cran-knitr (1.45+dfsg-1) ... 1246s Setting up g++ (4:13.2.0-7ubuntu1) ... 1246s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1246s Setting up r-cran-cachem (1.0.8-1) ... 1246s Setting up build-essential (12.10ubuntu1) ... 1246s Setting up r-bioc-iranges (2.36.0-1) ... 1246s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 1246s Setting up r-cran-vctrs (0.6.5-1) ... 1246s Setting up r-bioc-graph (1.80.0-1) ... 1246s Setting up r-cran-ellipsis (0.3.2-2) ... 1246s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 1246s Setting up r-base-dev (4.3.2-1build1) ... 1246s Setting up r-cran-stringr (1.5.1-1) ... 1246s Setting up texlive-bibtex-extra (2023.20240207-1) ... 1246s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 1246s Setting up r-cran-httr (1.4.7+dfsg-1) ... 1246s Setting up r-cran-memoise (2.0.1-1) ... 1246s Setting up r-cran-promises (1.2.1+dfsg-1) ... 1246s Setting up r-cran-blob (1.2.4-1) ... 1246s Setting up r-cran-htmltools (0.5.7-1) ... 1246s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1246s Setting up r-bioc-xvector (0.42.0-1) ... 1246s Setting up r-cran-sass (0.4.8+dfsg-1) ... 1246s Setting up r-cran-rsqlite (2.3.4-1) ... 1246s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 1246s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 1246s Setting up r-cran-fontawesome (0.5.2-1) ... 1246s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 1246s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 1246s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 1246s Setting up r-bioc-annotationdbi (1.64.1-1) ... 1246s Setting up r-bioc-go.db (3.18.0-1) ... 1246s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 1246s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 1246s Setting up r-cran-bookdown (0.37+dfsg-1) ... 1246s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 1246s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 1246s Processing triggers for libc-bin (2.39-0ubuntu2) ... 1246s Processing triggers for man-db (2.12.0-3) ... 1248s Processing triggers for install-info (7.1-3) ... 1248s Processing triggers for tex-common (6.18) ... 1248s Running updmap-sys. This may take some time... done. 1248s Running mktexlsr /var/lib/texmf ... done. 1248s Building format(s) --all. 1279s This may take some time... done. 1287s Reading package lists... 1287s Building dependency tree... 1287s Reading state information... 1287s Starting pkgProblemResolver with broken count: 0 1287s Starting 2 pkgProblemResolver with broken count: 0 1288s Done 1288s The following NEW packages will be installed: 1288s autopkgtest-satdep 1288s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 1288s Need to get 0 B/696 B of archives. 1288s After this operation, 0 B of additional disk space will be used. 1288s Get:1 /tmp/autopkgtest.OBtp3C/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 1288s Selecting previously unselected package autopkgtest-satdep. 1288s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 100246 files and directories currently installed.) 1288s Preparing to unpack .../2-autopkgtest-satdep.deb ... 1288s Unpacking autopkgtest-satdep (0) ... 1288s Setting up autopkgtest-satdep (0) ... 1290s (Reading database ... 100246 files and directories currently installed.) 1290s Removing autopkgtest-satdep (0) ... 1290s autopkgtest [01:13:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1290s autopkgtest [01:13:06]: test pkg-r-autopkgtest: [----------------------- 1290s Test: Try to load the R library AnnotationDbi 1290s 1290s R version 4.3.2 (2023-10-31) -- "Eye Holes" 1290s Copyright (C) 2023 The R Foundation for Statistical Computing 1290s Platform: x86_64-pc-linux-gnu (64-bit) 1290s 1290s R is free software and comes with ABSOLUTELY NO WARRANTY. 1290s You are welcome to redistribute it under certain conditions. 1290s Type 'license()' or 'licence()' for distribution details. 1290s 1290s R is a collaborative project with many contributors. 1290s Type 'contributors()' for more information and 1290s 'citation()' on how to cite R or R packages in publications. 1290s 1290s Type 'demo()' for some demos, 'help()' for on-line help, or 1290s 'help.start()' for an HTML browser interface to help. 1290s Type 'q()' to quit R. 1290s 1290s > library('AnnotationDbi') 1290s Loading required package: stats4 1290s Loading required package: BiocGenerics 1291s 1291s Attaching package: ‘BiocGenerics’ 1291s 1291s The following objects are masked from ‘package:stats’: 1291s 1291s IQR, mad, sd, var, xtabs 1291s 1291s The following objects are masked from ‘package:base’: 1291s 1291s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 1291s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 1291s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 1291s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 1291s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 1291s table, tapply, union, unique, unsplit, which.max, which.min 1291s 1291s Loading required package: Biobase 1291s Welcome to Bioconductor 1291s 1291s Vignettes contain introductory material; view with 1291s 'browseVignettes()'. To cite Bioconductor, see 1291s 'citation("Biobase")', and for packages 'citation("pkgname")'. 1291s 1291s Loading required package: IRanges 1291s Loading required package: S4Vectors 1291s 1291s Attaching package: ‘S4Vectors’ 1291s 1291s The following object is masked from ‘package:utils’: 1291s 1291s findMatches 1291s 1291s The following objects are masked from ‘package:base’: 1291s 1291s expand.grid, I, unname 1291s 1293s > 1293s > 1294s Other tests are currently unsupported! 1294s They will be progressively added. 1294s autopkgtest [01:13:10]: test pkg-r-autopkgtest: -----------------------] 1294s pkg-r-autopkgtest PASS 1294s autopkgtest [01:13:10]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1294s autopkgtest [01:13:10]: @@@@@@@@@@@@@@@@@@@@ summary 1294s pkg-r-autopkgtest PASS