0s autopkgtest [11:55:31]: starting date and time: 2024-03-21 11:55:31+0000 0s autopkgtest [11:55:31]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [11:55:31]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vrvo_zdn/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:htslib --apt-upgrade python-pyfaidx --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=htslib/1.19+ds-1.1build2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-47.secgroup --name adt-noble-i386-python-pyfaidx-20240321-115530-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 1169s autopkgtest [12:15:00]: testbed dpkg architecture: amd64 1169s autopkgtest [12:15:00]: testbed apt version: 2.7.12 1169s autopkgtest [12:15:00]: test architecture: i386 1169s autopkgtest [12:15:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1169s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 1170s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3770 kB] 1170s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 1170s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 1170s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 1170s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [695 kB] 1170s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [459 kB] 1170s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 1170s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 1170s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 1170s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 1170s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 1170s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1281 kB] 1170s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 1170s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 1170s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 1170s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 1173s Fetched 11.3 MB in 1s (7560 kB/s) 1173s Reading package lists... 1175s Reading package lists... 1176s Building dependency tree... 1176s Reading state information... 1176s Calculating upgrade... 1177s The following packages will be upgraded: 1177s debianutils linux-firmware 1177s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1177s Need to get 476 MB of archives. 1177s After this operation, 5724 kB of additional disk space will be used. 1177s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.17 [89.8 kB] 1177s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-firmware amd64 20240318.git3b128b60-0ubuntu1 [475 MB] 1181s Fetched 476 MB in 4s (129 MB/s) 1181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 1181s Preparing to unpack .../debianutils_5.17_amd64.deb ... 1181s Unpacking debianutils (5.17) over (5.16) ... 1181s Setting up debianutils (5.17) ... 1181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 1181s Preparing to unpack .../linux-firmware_20240318.git3b128b60-0ubuntu1_amd64.deb ... 1181s Unpacking linux-firmware (20240318.git3b128b60-0ubuntu1) over (20240202.git36777504-0ubuntu1) ... 1184s Setting up linux-firmware (20240318.git3b128b60-0ubuntu1) ... 1184s Processing triggers for man-db (2.12.0-3) ... 1185s Processing triggers for initramfs-tools (0.142ubuntu20) ... 1185s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 1185s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 1193s Reading package lists... 1193s Building dependency tree... 1193s Reading state information... 1194s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1194s sh: Attempting to set up Debian/Ubuntu apt sources automatically 1194s sh: Distribution appears to be Ubuntu 1195s Reading package lists... 1195s Building dependency tree... 1195s Reading state information... 1196s eatmydata is already the newest version (131-1). 1196s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1196s Reading package lists... 1196s Building dependency tree... 1196s Reading state information... 1197s dbus is already the newest version (1.14.10-4ubuntu1). 1197s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1197s Reading package lists... 1197s Building dependency tree... 1197s Reading state information... 1197s rng-tools-debian is already the newest version (2.4). 1197s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1197s Reading package lists... 1197s Building dependency tree... 1197s Reading state information... 1198s The following packages will be REMOVED: 1198s cloud-init* python3-configobj* python3-debconf* 1198s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 1198s After this operation, 3252 kB disk space will be freed. 1198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 1198s Removing cloud-init (24.1.1-0ubuntu1) ... 1199s Removing python3-configobj (5.0.8-3) ... 1199s Removing python3-debconf (1.5.86) ... 1199s Processing triggers for man-db (2.12.0-3) ... 1199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71476 files and directories currently installed.) 1199s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 1200s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 1200s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 1200s invoke-rc.d: policy-rc.d denied execution of try-restart. 1200s Reading package lists... 1200s Building dependency tree... 1200s Reading state information... 1200s linux-generic is already the newest version (6.8.0-11.11+1). 1200s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1201s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 1201s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 1201s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 1203s Reading package lists... 1203s Reading package lists... 1203s Building dependency tree... 1203s Reading state information... 1203s Calculating upgrade... 1203s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1203s Reading package lists... 1204s Building dependency tree... 1204s Reading state information... 1204s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1204s autopkgtest [12:15:35]: rebooting testbed after setup commands that affected boot 1231s autopkgtest [12:16:02]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 1233s autopkgtest [12:16:04]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pyfaidx 1234s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-pyfaidx 0.8.1.1-1 (dsc) [2554 B] 1234s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-pyfaidx 0.8.1.1-1 (tar) [96.5 kB] 1234s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-pyfaidx 0.8.1.1-1 (diff) [6964 B] 1234s gpgv: Signature made Sat Jan 20 17:44:36 2024 UTC 1234s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 1234s gpgv: issuer "emollier@debian.org" 1234s gpgv: Can't check signature: No public key 1234s dpkg-source: warning: cannot verify inline signature for ./python-pyfaidx_0.8.1.1-1.dsc: no acceptable signature found 1234s autopkgtest [12:16:05]: testing package python-pyfaidx version 0.8.1.1-1 1234s autopkgtest [12:16:05]: build not needed 1235s autopkgtest [12:16:06]: test run-unit-test: preparing testbed 1237s Note, using file '/tmp/autopkgtest.UU1lD8/1-autopkgtest-satdep.dsc' to get the build dependencies 1237s Reading package lists... 1238s Building dependency tree... 1238s Reading state information... 1238s Starting pkgProblemResolver with broken count: 0 1238s Starting 2 pkgProblemResolver with broken count: 0 1238s Done 1238s The following NEW packages will be installed: 1238s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 1238s fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono 1238s fonts-urw-base35 g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 1238s gcc-13 gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu libasan8 libatomic1 1238s libblas3 libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libdeflate0 1238s libfontconfig1 libfontenc1 libgcc-13-dev libgfortran5 libgomp1 1238s libgraphite2-3 libharfbuzz0b libhtscodecs2 libhwasan0 libimagequant0 1238s libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblcms2-2 1238s liblerc4 liblsan0 libmpc3 libnsl-dev libopenjp2-7 libpixman-1-0 libquadmath0 1238s libraqm0 libsharpyuv0 libstdc++-13-dev libtiff6 libtirpc-dev libtsan2 1238s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 1238s libxrender1 linux-libc-dev python-pyfaidx-examples python3-all 1238s python3-biopython python3-cairo python3-freetype python3-importlib-metadata 1238s python3-iniconfig python3-more-itertools python3-numpy python3-packaging 1238s python3-pil python3-pluggy python3-pyfaidx python3-pytest python3-reportlab 1238s python3-rlpycairo python3-zipp rpcsvc-proto sgml-base tabix w3c-sgml-lib 1238s x11-common xfonts-encodings xfonts-utils xml-core 1238s 0 upgraded, 90 newly installed, 0 to remove and 0 not upgraded. 1238s Need to get 99.7 MB of archives. 1238s After this operation, 365 MB of additional disk space will be used. 1238s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 sgml-base all 1.31 [11.4 kB] 1238s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 1238s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 1239s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 1239s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 1239s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 1239s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 1239s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 1239s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 1239s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 1239s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 1239s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 1239s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 1239s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 1239s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 1239s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 1239s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 1239s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 1239s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 1239s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 1239s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 1239s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 1239s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 1239s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 1239s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 1239s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 1239s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 1239s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 1239s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 1239s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 1239s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 1239s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 1239s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 1239s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 1239s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 1239s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 1239s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 1239s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libfontenc1 amd64 1:1.1.8-1 [14.0 kB] 1239s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 1239s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 1239s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 xfonts-utils amd64 1:7.7+6build2 [94.6 kB] 1239s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-urw-base35 all 20200910-8 [11.0 MB] 1239s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 1239s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-extra all 2.37-8 [1947 kB] 1239s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 1239s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 1239s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 1239s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 1239s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 1239s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 1239s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 1239s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 1239s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 1239s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 1239s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 1239s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 libhtscodecs2 amd64 1.6.0-1 [98.9 kB] 1239s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libimagequant0 amd64 2.18.0-1 [36.3 kB] 1239s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 1239s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 1239s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 1239s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 liblcms2-2 amd64 2.14-2 [161 kB] 1239s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 1239s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libraqm0 amd64 0.10.1-1 [14.6 kB] 1239s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 1239s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 1239s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 1239s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 1239s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libwebpdemux2 amd64 1.3.2-0.4 [12.4 kB] 1239s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 libwebpmux3 amd64 1.3.2-0.4 [25.6 kB] 1239s Get:70 http://ftpmaster.internal/ubuntu noble/universe amd64 python-pyfaidx-examples all 0.8.1.1-1 [37.9 kB] 1239s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 python3-all amd64 3.12.1-0ubuntu2 [906 B] 1239s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 python3-numpy amd64 1:1.24.2-2 [7141 kB] 1239s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 libopenjp2-7 amd64 2.5.0-2 [174 kB] 1239s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 python3-pil amd64 10.2.0-1 [487 kB] 1239s Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 python3-cairo amd64 1.25.1-2 [148 kB] 1239s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-freetype all 2.4.0-1 [83.1 kB] 1239s Get:77 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-rlpycairo all 0.3.0-3 [9130 B] 1239s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-reportlab all 4.1.0-1 [683 kB] 1239s Get:79 http://ftpmaster.internal/ubuntu noble/main amd64 xml-core all 0.19 [20.3 kB] 1239s Get:80 http://ftpmaster.internal/ubuntu noble/universe amd64 w3c-sgml-lib all 1.3-3 [280 kB] 1239s Get:81 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-biopython amd64 1.81+dfsg-3 [1670 kB] 1239s Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 python3-more-itertools all 10.2.0-1 [52.9 kB] 1239s Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 python3-zipp all 1.0.0-6 [6090 B] 1239s Get:84 http://ftpmaster.internal/ubuntu noble/main amd64 python3-importlib-metadata all 4.12.0-1 [17.8 kB] 1239s Get:85 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 1239s Get:86 http://ftpmaster.internal/ubuntu noble/main amd64 python3-packaging all 23.2-1 [40.6 kB] 1239s Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pluggy all 1.4.0-1 [20.4 kB] 1239s Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pyfaidx all 0.8.1.1-1 [29.6 kB] 1239s Get:89 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest all 7.4.4-1 [305 kB] 1239s Get:90 http://ftpmaster.internal/ubuntu noble/universe amd64 tabix amd64 1.18+ds-1 [495 kB] 1240s Fetched 99.7 MB in 1s (116 MB/s) 1240s Selecting previously unselected package sgml-base. 1240s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71421 files and directories currently installed.) 1240s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 1240s Unpacking sgml-base (1.31) ... 1240s Selecting previously unselected package libc-dev-bin. 1240s Preparing to unpack .../01-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 1240s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 1240s Selecting previously unselected package linux-libc-dev:amd64. 1240s Preparing to unpack .../02-linux-libc-dev_6.8.0-11.11_amd64.deb ... 1240s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 1240s Selecting previously unselected package libcrypt-dev:amd64. 1240s Preparing to unpack .../03-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 1240s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 1240s Selecting previously unselected package libtirpc-dev:amd64. 1240s Preparing to unpack .../04-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 1240s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 1240s Selecting previously unselected package libnsl-dev:amd64. 1240s Preparing to unpack .../05-libnsl-dev_1.3.0-3_amd64.deb ... 1240s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 1240s Selecting previously unselected package rpcsvc-proto. 1240s Preparing to unpack .../06-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 1240s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 1240s Selecting previously unselected package libc6-dev:amd64. 1240s Preparing to unpack .../07-libc6-dev_2.39-0ubuntu2_amd64.deb ... 1240s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 1241s Selecting previously unselected package libisl23:amd64. 1241s Preparing to unpack .../08-libisl23_0.26-3_amd64.deb ... 1241s Unpacking libisl23:amd64 (0.26-3) ... 1241s Selecting previously unselected package libmpc3:amd64. 1241s Preparing to unpack .../09-libmpc3_1.3.1-1_amd64.deb ... 1241s Unpacking libmpc3:amd64 (1.3.1-1) ... 1241s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 1241s Preparing to unpack .../10-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1241s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1241s Selecting previously unselected package cpp-13. 1241s Preparing to unpack .../11-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 1241s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 1241s Selecting previously unselected package cpp-x86-64-linux-gnu. 1241s Preparing to unpack .../12-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1241s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1241s Selecting previously unselected package cpp. 1241s Preparing to unpack .../13-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 1241s Unpacking cpp (4:13.2.0-7ubuntu1) ... 1241s Selecting previously unselected package libcc1-0:amd64. 1241s Preparing to unpack .../14-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libgomp1:amd64. 1241s Preparing to unpack .../15-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libitm1:amd64. 1241s Preparing to unpack .../16-libitm1_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libatomic1:amd64. 1241s Preparing to unpack .../17-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libasan8:amd64. 1241s Preparing to unpack .../18-libasan8_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package liblsan0:amd64. 1241s Preparing to unpack .../19-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libtsan2:amd64. 1241s Preparing to unpack .../20-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libubsan1:amd64. 1241s Preparing to unpack .../21-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libhwasan0:amd64. 1241s Preparing to unpack .../22-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libquadmath0:amd64. 1241s Preparing to unpack .../23-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 1241s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 1241s Selecting previously unselected package libgcc-13-dev:amd64. 1241s Preparing to unpack .../24-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1241s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 1242s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 1242s Preparing to unpack .../25-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1242s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1242s Selecting previously unselected package gcc-13. 1242s Preparing to unpack .../26-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 1242s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 1243s Selecting previously unselected package gcc-x86-64-linux-gnu. 1243s Preparing to unpack .../27-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1243s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1243s Selecting previously unselected package gcc. 1243s Preparing to unpack .../28-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 1243s Unpacking gcc (4:13.2.0-7ubuntu1) ... 1243s Selecting previously unselected package libstdc++-13-dev:amd64. 1243s Preparing to unpack .../29-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1243s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 1243s Selecting previously unselected package g++-13-x86-64-linux-gnu. 1243s Preparing to unpack .../30-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1243s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1243s Selecting previously unselected package g++-13. 1243s Preparing to unpack .../31-g++-13_13.2.0-17ubuntu2_amd64.deb ... 1243s Unpacking g++-13 (13.2.0-17ubuntu2) ... 1243s Selecting previously unselected package g++-x86-64-linux-gnu. 1243s Preparing to unpack .../32-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1243s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1243s Selecting previously unselected package g++. 1243s Preparing to unpack .../33-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 1243s Unpacking g++ (4:13.2.0-7ubuntu1) ... 1243s Selecting previously unselected package build-essential. 1243s Preparing to unpack .../34-build-essential_12.10ubuntu1_amd64.deb ... 1243s Unpacking build-essential (12.10ubuntu1) ... 1243s Selecting previously unselected package fonts-dejavu-mono. 1243s Preparing to unpack .../35-fonts-dejavu-mono_2.37-8_all.deb ... 1243s Unpacking fonts-dejavu-mono (2.37-8) ... 1243s Selecting previously unselected package fonts-dejavu-core. 1243s Preparing to unpack .../36-fonts-dejavu-core_2.37-8_all.deb ... 1243s Unpacking fonts-dejavu-core (2.37-8) ... 1243s Selecting previously unselected package libfontenc1:amd64. 1243s Preparing to unpack .../37-libfontenc1_1%3a1.1.8-1_amd64.deb ... 1243s Unpacking libfontenc1:amd64 (1:1.1.8-1) ... 1243s Selecting previously unselected package x11-common. 1243s Preparing to unpack .../38-x11-common_1%3a7.7+23ubuntu2_all.deb ... 1243s Unpacking x11-common (1:7.7+23ubuntu2) ... 1243s Selecting previously unselected package xfonts-encodings. 1243s Preparing to unpack .../39-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 1243s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 1243s Selecting previously unselected package xfonts-utils. 1243s Preparing to unpack .../40-xfonts-utils_1%3a7.7+6build2_amd64.deb ... 1243s Unpacking xfonts-utils (1:7.7+6build2) ... 1243s Selecting previously unselected package fonts-urw-base35. 1243s Preparing to unpack .../41-fonts-urw-base35_20200910-8_all.deb ... 1243s Unpacking fonts-urw-base35 (20200910-8) ... 1243s Selecting previously unselected package fontconfig-config. 1243s Preparing to unpack .../42-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 1243s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 1243s Selecting previously unselected package fonts-dejavu-extra. 1243s Preparing to unpack .../43-fonts-dejavu-extra_2.37-8_all.deb ... 1243s Unpacking fonts-dejavu-extra (2.37-8) ... 1243s Selecting previously unselected package libblas3:amd64. 1243s Preparing to unpack .../44-libblas3_3.12.0-3_amd64.deb ... 1243s Unpacking libblas3:amd64 (3.12.0-3) ... 1243s Selecting previously unselected package libfontconfig1:amd64. 1243s Preparing to unpack .../45-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 1243s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 1243s Selecting previously unselected package libpixman-1-0:amd64. 1243s Preparing to unpack .../46-libpixman-1-0_0.42.2-1_amd64.deb ... 1243s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 1243s Selecting previously unselected package libxcb-render0:amd64. 1243s Preparing to unpack .../47-libxcb-render0_1.15-1_amd64.deb ... 1243s Unpacking libxcb-render0:amd64 (1.15-1) ... 1243s Selecting previously unselected package libxcb-shm0:amd64. 1243s Preparing to unpack .../48-libxcb-shm0_1.15-1_amd64.deb ... 1243s Unpacking libxcb-shm0:amd64 (1.15-1) ... 1243s Selecting previously unselected package libxrender1:amd64. 1243s Preparing to unpack .../49-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 1243s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 1243s Selecting previously unselected package libcairo2:amd64. 1243s Preparing to unpack .../50-libcairo2_1.18.0-1_amd64.deb ... 1243s Unpacking libcairo2:amd64 (1.18.0-1) ... 1243s Selecting previously unselected package libdeflate0:amd64. 1243s Preparing to unpack .../51-libdeflate0_1.19-1_amd64.deb ... 1243s Unpacking libdeflate0:amd64 (1.19-1) ... 1243s Selecting previously unselected package libgfortran5:amd64. 1243s Preparing to unpack .../52-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 1243s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 1243s Selecting previously unselected package libgraphite2-3:amd64. 1243s Preparing to unpack .../53-libgraphite2-3_1.3.14-2_amd64.deb ... 1243s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 1243s Selecting previously unselected package libharfbuzz0b:amd64. 1244s Preparing to unpack .../54-libharfbuzz0b_8.3.0-2_amd64.deb ... 1244s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 1244s Selecting previously unselected package libhtscodecs2:amd64. 1244s Preparing to unpack .../55-libhtscodecs2_1.6.0-1_amd64.deb ... 1244s Unpacking libhtscodecs2:amd64 (1.6.0-1) ... 1244s Selecting previously unselected package libimagequant0:amd64. 1244s Preparing to unpack .../56-libimagequant0_2.18.0-1_amd64.deb ... 1244s Unpacking libimagequant0:amd64 (2.18.0-1) ... 1244s Selecting previously unselected package libjpeg-turbo8:amd64. 1244s Preparing to unpack .../57-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 1244s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 1244s Selecting previously unselected package libjpeg8:amd64. 1244s Preparing to unpack .../58-libjpeg8_8c-2ubuntu11_amd64.deb ... 1244s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 1244s Selecting previously unselected package liblapack3:amd64. 1244s Preparing to unpack .../59-liblapack3_3.12.0-3_amd64.deb ... 1244s Unpacking liblapack3:amd64 (3.12.0-3) ... 1244s Selecting previously unselected package liblcms2-2:amd64. 1244s Preparing to unpack .../60-liblcms2-2_2.14-2_amd64.deb ... 1244s Unpacking liblcms2-2:amd64 (2.14-2) ... 1244s Selecting previously unselected package liblerc4:amd64. 1244s Preparing to unpack .../61-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 1244s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 1244s Selecting previously unselected package libraqm0:amd64. 1244s Preparing to unpack .../62-libraqm0_0.10.1-1_amd64.deb ... 1244s Unpacking libraqm0:amd64 (0.10.1-1) ... 1244s Selecting previously unselected package libsharpyuv0:amd64. 1244s Preparing to unpack .../63-libsharpyuv0_1.3.2-0.4_amd64.deb ... 1244s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ... 1244s Selecting previously unselected package libjbig0:amd64. 1244s Preparing to unpack .../64-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 1244s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 1244s Selecting previously unselected package libwebp7:amd64. 1244s Preparing to unpack .../65-libwebp7_1.3.2-0.4_amd64.deb ... 1244s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 1244s Selecting previously unselected package libtiff6:amd64. 1244s Preparing to unpack .../66-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 1244s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 1244s Selecting previously unselected package libwebpdemux2:amd64. 1244s Preparing to unpack .../67-libwebpdemux2_1.3.2-0.4_amd64.deb ... 1244s Unpacking libwebpdemux2:amd64 (1.3.2-0.4) ... 1244s Selecting previously unselected package libwebpmux3:amd64. 1244s Preparing to unpack .../68-libwebpmux3_1.3.2-0.4_amd64.deb ... 1244s Unpacking libwebpmux3:amd64 (1.3.2-0.4) ... 1244s Selecting previously unselected package python-pyfaidx-examples. 1244s Preparing to unpack .../69-python-pyfaidx-examples_0.8.1.1-1_all.deb ... 1244s Unpacking python-pyfaidx-examples (0.8.1.1-1) ... 1244s Selecting previously unselected package python3-all. 1244s Preparing to unpack .../70-python3-all_3.12.1-0ubuntu2_amd64.deb ... 1244s Unpacking python3-all (3.12.1-0ubuntu2) ... 1244s Selecting previously unselected package python3-numpy. 1244s Preparing to unpack .../71-python3-numpy_1%3a1.24.2-2_amd64.deb ... 1244s Unpacking python3-numpy (1:1.24.2-2) ... 1244s Selecting previously unselected package libopenjp2-7:amd64. 1244s Preparing to unpack .../72-libopenjp2-7_2.5.0-2_amd64.deb ... 1244s Unpacking libopenjp2-7:amd64 (2.5.0-2) ... 1244s Selecting previously unselected package python3-pil:amd64. 1244s Preparing to unpack .../73-python3-pil_10.2.0-1_amd64.deb ... 1244s Unpacking python3-pil:amd64 (10.2.0-1) ... 1244s Selecting previously unselected package python3-cairo. 1244s Preparing to unpack .../74-python3-cairo_1.25.1-2_amd64.deb ... 1244s Unpacking python3-cairo (1.25.1-2) ... 1244s Selecting previously unselected package python3-freetype. 1244s Preparing to unpack .../75-python3-freetype_2.4.0-1_all.deb ... 1244s Unpacking python3-freetype (2.4.0-1) ... 1244s Selecting previously unselected package python3-rlpycairo. 1244s Preparing to unpack .../76-python3-rlpycairo_0.3.0-3_all.deb ... 1244s Unpacking python3-rlpycairo (0.3.0-3) ... 1244s Selecting previously unselected package python3-reportlab. 1244s Preparing to unpack .../77-python3-reportlab_4.1.0-1_all.deb ... 1244s Unpacking python3-reportlab (4.1.0-1) ... 1245s Selecting previously unselected package xml-core. 1245s Preparing to unpack .../78-xml-core_0.19_all.deb ... 1245s Unpacking xml-core (0.19) ... 1245s Selecting previously unselected package w3c-sgml-lib. 1245s Preparing to unpack .../79-w3c-sgml-lib_1.3-3_all.deb ... 1245s Unpacking w3c-sgml-lib (1.3-3) ... 1245s Selecting previously unselected package python3-biopython. 1245s Preparing to unpack .../80-python3-biopython_1.81+dfsg-3_amd64.deb ... 1245s Unpacking python3-biopython (1.81+dfsg-3) ... 1245s Selecting previously unselected package python3-more-itertools. 1245s Preparing to unpack .../81-python3-more-itertools_10.2.0-1_all.deb ... 1245s Unpacking python3-more-itertools (10.2.0-1) ... 1245s Selecting previously unselected package python3-zipp. 1245s Preparing to unpack .../82-python3-zipp_1.0.0-6_all.deb ... 1245s Unpacking python3-zipp (1.0.0-6) ... 1245s Selecting previously unselected package python3-importlib-metadata. 1245s Preparing to unpack .../83-python3-importlib-metadata_4.12.0-1_all.deb ... 1245s Unpacking python3-importlib-metadata (4.12.0-1) ... 1245s Selecting previously unselected package python3-iniconfig. 1245s Preparing to unpack .../84-python3-iniconfig_1.1.1-2_all.deb ... 1245s Unpacking python3-iniconfig (1.1.1-2) ... 1245s Selecting previously unselected package python3-packaging. 1245s Preparing to unpack .../85-python3-packaging_23.2-1_all.deb ... 1245s Unpacking python3-packaging (23.2-1) ... 1245s Selecting previously unselected package python3-pluggy. 1245s Preparing to unpack .../86-python3-pluggy_1.4.0-1_all.deb ... 1245s Unpacking python3-pluggy (1.4.0-1) ... 1245s Selecting previously unselected package python3-pyfaidx. 1245s Preparing to unpack .../87-python3-pyfaidx_0.8.1.1-1_all.deb ... 1245s Unpacking python3-pyfaidx (0.8.1.1-1) ... 1245s Selecting previously unselected package python3-pytest. 1245s Preparing to unpack .../88-python3-pytest_7.4.4-1_all.deb ... 1245s Unpacking python3-pytest (7.4.4-1) ... 1245s Selecting previously unselected package tabix. 1245s Preparing to unpack .../89-tabix_1.18+ds-1_amd64.deb ... 1245s Unpacking tabix (1.18+ds-1) ... 1245s Setting up libhtscodecs2:amd64 (1.6.0-1) ... 1245s Setting up python3-more-itertools (10.2.0-1) ... 1245s Setting up libgraphite2-3:amd64 (1.3.14-2) ... 1245s Setting up liblcms2-2:amd64 (2.14-2) ... 1245s Setting up python3-iniconfig (1.1.1-2) ... 1245s Setting up libpixman-1-0:amd64 (0.42.2-1) ... 1245s Setting up libsharpyuv0:amd64 (1.3.2-0.4) ... 1245s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 1245s Setting up libxrender1:amd64 (1:0.9.10-1.1) ... 1245s Setting up python-pyfaidx-examples (0.8.1.1-1) ... 1245s Setting up libxcb-render0:amd64 (1.15-1) ... 1245s Setting up x11-common (1:7.7+23ubuntu2) ... 1246s Setting up libdeflate0:amd64 (1.19-1) ... 1246s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 1246s Setting up python3-all (3.12.1-0ubuntu2) ... 1246s Setting up libxcb-shm0:amd64 (1.15-1) ... 1246s Setting up python3-zipp (1.0.0-6) ... 1246s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up python3-freetype (2.4.0-1) ... 1246s Setting up libjbig0:amd64 (2.1-6.1ubuntu1) ... 1246s Setting up libfontenc1:amd64 (1:1.1.8-1) ... 1246s Setting up libblas3:amd64 (3.12.0-3) ... 1246s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 1246s Setting up python3-packaging (23.2-1) ... 1246s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 1246s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 1246s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 1246s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up libimagequant0:amd64 (2.18.0-1) ... 1246s Setting up fonts-dejavu-mono (2.37-8) ... 1246s Setting up libmpc3:amd64 (1.3.1-1) ... 1246s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up fonts-dejavu-core (2.37-8) ... 1246s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 1246s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up python3-pluggy (1.4.0-1) ... 1246s Setting up libwebp7:amd64 (1.3.2-0.4) ... 1246s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up fonts-dejavu-extra (2.37-8) ... 1246s Setting up libnsl-dev:amd64 (1.3.0-3) ... 1246s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 1246s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up libopenjp2-7:amd64 (2.5.0-2) ... 1246s Setting up libharfbuzz0b:amd64 (8.3.0-2) ... 1246s Setting up sgml-base (1.31) ... 1246s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up libisl23:amd64 (0.26-3) ... 1246s Setting up libc-dev-bin (2.39-0ubuntu2) ... 1246s Setting up libwebpmux3:amd64 (1.3.2-0.4) ... 1246s Setting up tabix (1.18+ds-1) ... 1246s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 1246s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 1246s Setting up liblapack3:amd64 (3.12.0-3) ... 1246s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 1246s Setting up python3-importlib-metadata (4.12.0-1) ... 1246s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1246s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 1247s Setting up python3-pytest (7.4.4-1) ... 1247s Setting up libwebpdemux2:amd64 (1.3.2-0.4) ... 1247s Setting up xfonts-utils (1:7.7+6build2) ... 1247s Setting up libraqm0:amd64 (0.10.1-1) ... 1247s Setting up python3-numpy (1:1.24.2-2) ... 1249s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 1249s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 1249s Setting up xml-core (0.19) ... 1249s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 1249s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 1249s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 1249s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1249s Setting up python3-pyfaidx (0.8.1.1-1) ... 1249s Setting up cpp-13 (13.2.0-17ubuntu2) ... 1249s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1249s Setting up fonts-urw-base35 (20200910-8) ... 1249s Setting up libcairo2:amd64 (1.18.0-1) ... 1249s Setting up python3-pil:amd64 (10.2.0-1) ... 1249s Setting up gcc-13 (13.2.0-17ubuntu2) ... 1249s Setting up cpp (4:13.2.0-7ubuntu1) ... 1249s Setting up python3-cairo (1.25.1-2) ... 1249s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1249s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1249s Setting up gcc (4:13.2.0-7ubuntu1) ... 1249s Setting up python3-rlpycairo (0.3.0-3) ... 1250s Setting up python3-reportlab (4.1.0-1) ... 1250s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1250s Setting up g++-13 (13.2.0-17ubuntu2) ... 1250s Setting up g++ (4:13.2.0-7ubuntu1) ... 1250s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1250s Setting up build-essential (12.10ubuntu1) ... 1250s Processing triggers for libc-bin (2.39-0ubuntu2) ... 1250s Processing triggers for man-db (2.12.0-3) ... 1252s Processing triggers for sgml-base (1.31) ... 1252s Setting up w3c-sgml-lib (1.3-3) ... 1277s Setting up python3-biopython (1.81+dfsg-3) ... 1280s Reading package lists... 1280s Building dependency tree... 1280s Reading state information... 1280s Starting pkgProblemResolver with broken count: 0 1280s Starting 2 pkgProblemResolver with broken count: 0 1280s Done 1281s The following NEW packages will be installed: 1281s autopkgtest-satdep 1281s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 1281s Need to get 0 B/696 B of archives. 1281s After this operation, 0 B of additional disk space will be used. 1281s Get:1 /tmp/autopkgtest.UU1lD8/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 1281s Selecting previously unselected package autopkgtest-satdep. 1281s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 77895 files and directories currently installed.) 1281s Preparing to unpack .../2-autopkgtest-satdep.deb ... 1281s Unpacking autopkgtest-satdep (0) ... 1281s Setting up autopkgtest-satdep (0) ... 1283s (Reading database ... 77895 files and directories currently installed.) 1283s Removing autopkgtest-satdep (0) ... 1283s autopkgtest [12:16:54]: test run-unit-test: [----------------------- 1283s Testing with python3.12 in /tmp/autopkgtest.UU1lD8/build.AXk/src: 1284s ============================= test session starts ============================== 1284s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.12 1284s cachedir: .pytest_cache 1284s rootdir: /tmp/autopkgtest.UU1lD8/build.AXk/src 1284s collecting ... collected 136 items 1284s 1284s tests/test_FastaRecord.py::test_sequence_uppercase PASSED [ 0%] 1284s tests/test_FastaRecord.py::test_long_names PASSED [ 1%] 1284s tests/test_FastaRecord.py::test_issue_62 PASSED [ 2%] 1284s tests/test_FastaRecord.py::test_unpadded_length PASSED [ 2%] 1284s tests/test_FastaRecord.py::test_numpy_array PASSED [ 3%] 1284s tests/test_FastaRecord_iter.py::test_fetch_whole_fasta PASSED [ 4%] 1284s tests/test_FastaRecord_iter.py::test_line_len PASSED [ 5%] 1284s tests/test_FastaRecord_iter.py::test_reverse_iter PASSED [ 5%] 1284s tests/test_FastaVariant.py::test_fetch_variant SKIPPED (pysam not in...) [ 6%] 1284s tests/test_FastaVariant.py::test_fetch_hom_variant SKIPPED (pysam no...) [ 7%] 1284s tests/test_FastaVariant.py::test_fetch_het_variant SKIPPED (pysam no...) [ 8%] 1284s tests/test_FastaVariant.py::test_fetch_chr_not_in_vcf SKIPPED (pysam...) [ 8%] 1284s tests/test_FastaVariant.py::test_all_pos SKIPPED (pysam not installed.) [ 9%] 1284s tests/test_FastaVariant.py::test_all_diff SKIPPED (pysam not installed.) [ 10%] 1284s tests/test_Fasta_bgzip.py::test_build_issue_126 XFAIL [ 11%] 1284s tests/test_Fasta_bgzip.py::test_integer_slice PASSED [ 11%] 1284s tests/test_Fasta_bgzip.py::test_integer_index PASSED [ 12%] 1284s tests/test_Fasta_bgzip.py::test_fetch_whole_fasta PASSED [ 13%] 1284s tests/test_Fasta_bgzip.py::test_line_len PASSED [ 13%] 1284s tests/test_Fasta_bgzip.py::test_mutable_bgzf PASSED [ 14%] 1284s tests/test_Fasta_bgzip.py::test_long_names XFAIL [ 15%] 1284s tests/test_Fasta_bgzip.py::test_fetch_whole_entry PASSED [ 16%] 1284s tests/test_Fasta_bgzip.py::test_fetch_middle PASSED [ 16%] 1284s tests/test_Fasta_bgzip.py::test_fetch_end PASSED [ 17%] 1284s tests/test_Fasta_bgzip.py::test_fetch_border PASSED [ 18%] 1284s tests/test_Fasta_bgzip.py::test_rev PASSED [ 19%] 1284s tests/test_Fasta_bgzip.py::test_fetch_past_bounds PASSED [ 19%] 1284s tests/test_Fasta_bgzip.py::test_fetch_negative PASSED [ 20%] 1284s tests/test_Fasta_bgzip.py::test_fetch_reversed_coordinates PASSED [ 21%] 1284s tests/test_Fasta_bgzip.py::test_fetch_keyerror PASSED [ 22%] 1284s tests/test_Fasta_bgzip.py::test_blank_string PASSED [ 22%] 1284s tests/test_Fasta_bgzip.py::test_slice_from_beginning PASSED [ 23%] 1284s tests/test_Fasta_bgzip.py::test_slice_from_end PASSED [ 24%] 1284s tests/test_Fasta_bgzip.py::test_issue_74_start PASSED [ 25%] 1284s tests/test_Fasta_bgzip.py::test_issue_74_consistency PASSED [ 25%] 1284s tests/test_Fasta_bgzip.py::test_issue_74_end_faidx PASSED [ 26%] 1284s tests/test_Fasta_bgzip.py::test_issue_74_end_fasta PASSED [ 27%] 1284s tests/test_Fasta_bgzip.py::test_issue_79_fix PASSED [ 27%] 1284s tests/test_Fasta_bgzip.py::test_issue_79_fix_negate PASSED [ 28%] 1284s tests/test_Fasta_bgzip.py::test_issue_79_fix_one_based_false PASSED [ 29%] 1284s tests/test_Fasta_bgzip.py::test_issue_79_fix_one_based_false_negate PASSED [ 30%] 1284s tests/test_Fasta_bgzip.py::test_fetch_border_padded PASSED [ 30%] 1284s tests/test_Fasta_integer_index.py::test_integer_slice PASSED [ 31%] 1284s tests/test_Fasta_integer_index.py::test_integer_index PASSED [ 32%] 1284s tests/test_Fasta_synchronization.py::TestFastaIntIndex::test_simultaneous_reads PASSED [ 33%] 1284s tests/test_Fasta_synchronization.py::TestFastaIntIndex::test_simultaneous_reads_and_writes PASSED [ 33%] 1285s tests/test_Fasta_synchronization.py::TestFastaIntIndex::test_simultaneous_writes PASSED [ 34%] 1285s tests/test_Path.py::test_Faidx PASSED [ 35%] 1285s tests/test_Path.py::test_Fasta PASSED [ 36%] 1285s tests/test_bio_seqio.py::test_fetch_whole_entry PASSED [ 36%] 1285s tests/test_bio_seqio.py::test_slice_whole_entry PASSED [ 37%] 1285s tests/test_bio_seqio.py::test_revcomp_whole_entry PASSED [ 38%] 1285s tests/test_faidx.py::test_short_line_lengths PASSED [ 38%] 1285s tests/test_faidx.py::test_fetch_whole_file PASSED [ 39%] 1285s tests/test_faidx.py::test_split_entry PASSED [ 40%] 1285s tests/test_faidx.py::test_fetch_error PASSED [ 41%] 1285s tests/test_faidx.py::test_key_warning PASSED [ 41%] 1285s tests/test_faidx.py::test_auto_strand PASSED [ 42%] 1285s tests/test_faidx.py::test_regexp PASSED [ 43%] 1285s tests/test_faidx.py::test_not_regexp PASSED [ 44%] 1285s tests/test_faidx.py::test_not_regexp_multi PASSED [ 44%] 1285s tests/test_feature_bounds_check.py::test_index_zero_length PASSED [ 45%] 1285s tests/test_feature_bounds_check.py::test_fetch_zero_length PASSED [ 46%] 1285s tests/test_feature_bounds_check.py::test_as_raw_zero_length_subsequence PASSED [ 47%] 1285s tests/test_feature_bounds_check.py::test_zero_length_subsequence PASSED [ 47%] 1285s tests/test_feature_bounds_check.py::test_fetch_whole_entry PASSED [ 48%] 1285s tests/test_feature_bounds_check.py::test_fetch_middle PASSED [ 49%] 1285s tests/test_feature_bounds_check.py::test_fetch_end PASSED [ 50%] 1285s tests/test_feature_bounds_check.py::test_fetch_border PASSED [ 50%] 1285s tests/test_feature_bounds_check.py::test_rev PASSED [ 51%] 1285s tests/test_feature_bounds_check.py::test_fetch_past_bounds PASSED [ 52%] 1285s tests/test_feature_bounds_check.py::test_fetch_negative PASSED [ 52%] 1285s tests/test_feature_bounds_check.py::test_fetch_reversed_coordinates PASSED [ 53%] 1285s tests/test_feature_bounds_check.py::test_fetch_keyerror PASSED [ 54%] 1285s tests/test_feature_bounds_check.py::test_blank_string PASSED [ 55%] 1285s tests/test_feature_bounds_check.py::test_slice_from_beginning PASSED [ 55%] 1285s tests/test_feature_bounds_check.py::test_slice_from_end PASSED [ 56%] 1285s tests/test_feature_bounds_check.py::test_issue_74_start PASSED [ 57%] 1285s tests/test_feature_bounds_check.py::test_issue_74_consistency PASSED [ 58%] 1285s tests/test_feature_bounds_check.py::test_issue_74_end_faidx PASSED [ 58%] 1285s tests/test_feature_bounds_check.py::test_issue_74_end_fasta PASSED [ 59%] 1285s tests/test_feature_bounds_check.py::test_issue_79_fix PASSED [ 60%] 1285s tests/test_feature_bounds_check.py::test_issue_79_fix_negate PASSED [ 61%] 1285s tests/test_feature_bounds_check.py::test_issue_79_fix_one_based_false PASSED [ 61%] 1285s tests/test_feature_bounds_check.py::test_issue_79_fix_one_based_false_negate PASSED [ 62%] 1285s tests/test_feature_default_seq.py::test_fetch_border_padded PASSED [ 63%] 1285s tests/test_feature_indexing.py::test_version_issue_206 PASSED [ 63%] 1285s tests/test_feature_indexing.py::test_build PASSED [ 64%] 1285s tests/test_feature_indexing.py::test_build_issue_141 PASSED [ 65%] 1285s tests/test_feature_indexing.py::test_build_issue_111 PASSED [ 66%] 1285s tests/test_feature_indexing.py::test_order PASSED [ 66%] 1288s tests/test_feature_indexing.py::test_valgrind_short_lines PASSED [ 67%] 1291s tests/test_feature_indexing.py::test_valgrind_long_lines PASSED [ 68%] 1293s tests/test_feature_indexing.py::test_valgrind_blank_lines PASSED [ 69%] 1295s tests/test_feature_indexing.py::test_reindex_on_modification PASSED [ 69%] 1295s tests/test_feature_indexing.py::test_build_issue_83 PASSED [ 70%] 1295s tests/test_feature_indexing.py::test_build_issue_96_fail_build_faidx PASSED [ 71%] 1295s tests/test_feature_indexing.py::test_build_issue_96_fail_read_malformed_index_duplicate_key PASSED [ 72%] 1295s tests/test_feature_indexing.py::test_read_back_index PASSED [ 72%] 1295s tests/test_feature_indexing.py::test_issue_134_no_build_index PASSED [ 73%] 1295s tests/test_feature_indexing.py::test_issue_144_no_defline PASSED [ 74%] 1295s tests/test_feature_key_function.py::test_keys PASSED [ 75%] 1295s tests/test_feature_key_function.py::test_key_function_by_dictionary_get_key PASSED [ 75%] 1295s tests/test_feature_key_function.py::test_key_function_by_fetch PASSED [ 76%] 1295s tests/test_feature_key_function.py::test_duplicated_keys PASSED [ 77%] 1295s tests/test_feature_key_function.py::test_duplicated_keys_shortest PASSED [ 77%] 1295s tests/test_feature_key_function.py::test_duplicated_keys_longest PASSED [ 78%] 1295s tests/test_feature_read_ahead_buffer.py::test_buffer_false PASSED [ 79%] 1295s tests/test_feature_read_ahead_buffer.py::test_buffer_true PASSED [ 80%] 1295s tests/test_feature_read_ahead_buffer.py::test_buffer_exceed PASSED [ 80%] 1295s tests/test_feature_read_ahead_buffer.py::test_bounds_error PASSED [ 81%] 1295s tests/test_feature_read_ahead_buffer.py::test_buffer_value PASSED [ 82%] 1295s tests/test_feature_sequence_as_raw.py::test_as_raw_false PASSED [ 83%] 1295s tests/test_feature_sequence_as_raw.py::test_as_raw_true PASSED [ 83%] 1295s tests/test_feature_sequence_as_raw.py::test_as_raw_false_error PASSED [ 84%] 1295s tests/test_feature_sequence_as_raw.py::test_as_raw_true_error PASSED [ 85%] 1295s tests/test_feature_sequence_as_raw.py::test_as_raw_type_when_blen_lt_0 PASSED [ 86%] 1295s tests/test_feature_spliced_seq.py::test_split_seq PASSED [ 86%] 1295s tests/test_feature_spliced_seq.py::test_get_seq_rc PASSED [ 87%] 1295s tests/test_feature_split_char.py::test_keys PASSED [ 88%] 1296s tests/test_feature_split_char.py::test_key_function_by_dictionary_get_key PASSED [ 88%] 1296s tests/test_feature_split_char.py::test_key_function_by_fetch PASSED [ 89%] 1296s tests/test_feature_split_char.py::test_stop PASSED [ 90%] 1296s tests/test_fsspec.py::test_fsspec_fetch_whole_file SKIPPED (uncondit...) [ 91%] 1296s tests/test_fsspec.py::test_fsspec_default_index SKIPPED (uncondition...) [ 91%] 1296s tests/test_fsspec.py::test_fsspec_local_index SKIPPED (unconditional...) [ 92%] 1296s tests/test_fsspec.py::test_fsspec_remote_index SKIPPED (unconditiona...) [ 93%] 1296s tests/test_sequence_class.py::test_negate PASSED [ 94%] 1296s tests/test_sequence_class.py::test_negate_metadata PASSED [ 94%] 1296s tests/test_sequence_class.py::test_seq_invalid PASSED [ 95%] 1296s tests/test_sequence_class.py::test_integer_index PASSED [ 96%] 1296s tests/test_sequence_class.py::test_slice_index PASSED [ 97%] 1296s tests/test_sequence_class.py::test_comp_invalid PASSED [ 97%] 1296s tests/test_sequence_class.py::test_check_coordinates PASSED [ 98%] 1296s tests/test_sequence_class.py::test_comp_valid PASSED [ 99%] 1296s tests/test_sequence_class.py::test_comp_empty PASSED [100%] 1296s 1296s ================= 124 passed, 10 skipped, 2 xfailed in 12.02s ================== 1296s autopkgtest [12:17:07]: test run-unit-test: -----------------------] 1296s autopkgtest [12:17:07]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1296s run-unit-test PASS 1296s autopkgtest [12:17:07]: test autodep8-python3: preparing testbed 1756s autopkgtest [12:24:47]: testbed dpkg architecture: amd64 1756s autopkgtest [12:24:47]: testbed apt version: 2.7.12 1756s autopkgtest [12:24:47]: test architecture: i386 1756s autopkgtest [12:24:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1757s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 1757s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [495 kB] 1757s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 1757s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3774 kB] 1757s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 1757s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [460 kB] 1757s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [696 kB] 1757s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 1757s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 1757s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 1757s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 1757s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1273 kB] 1757s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4238 kB] 1757s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 1757s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 1757s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 1757s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 1760s Fetched 11.3 MB in 1s (8117 kB/s) 1760s Reading package lists... 1762s Reading package lists... 1762s Building dependency tree... 1762s Reading state information... 1762s Calculating upgrade... 1762s The following packages will be upgraded: 1762s debianutils linux-firmware 1762s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1762s Need to get 476 MB of archives. 1762s After this operation, 5724 kB of additional disk space will be used. 1762s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.17 [89.8 kB] 1762s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-firmware amd64 20240318.git3b128b60-0ubuntu1 [475 MB] 1766s Fetched 476 MB in 4s (132 MB/s) 1767s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 1767s Preparing to unpack .../debianutils_5.17_amd64.deb ... 1767s Unpacking debianutils (5.17) over (5.16) ... 1767s Setting up debianutils (5.17) ... 1767s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 1767s Preparing to unpack .../linux-firmware_20240318.git3b128b60-0ubuntu1_amd64.deb ... 1767s Unpacking linux-firmware (20240318.git3b128b60-0ubuntu1) over (20240202.git36777504-0ubuntu1) ... 1770s Setting up linux-firmware (20240318.git3b128b60-0ubuntu1) ... 1770s Processing triggers for man-db (2.12.0-3) ... 1771s Processing triggers for initramfs-tools (0.142ubuntu20) ... 1771s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 1771s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 1778s Reading package lists... 1778s Building dependency tree... 1778s Reading state information... 1779s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1779s sh: Attempting to set up Debian/Ubuntu apt sources automatically 1779s sh: Distribution appears to be Ubuntu 1780s Reading package lists... 1780s Building dependency tree... 1780s Reading state information... 1780s eatmydata is already the newest version (131-1). 1780s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1780s Reading package lists... 1781s Building dependency tree... 1781s Reading state information... 1781s dbus is already the newest version (1.14.10-4ubuntu1). 1781s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1781s Reading package lists... 1781s Building dependency tree... 1781s Reading state information... 1781s rng-tools-debian is already the newest version (2.4). 1781s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1781s Reading package lists... 1782s Building dependency tree... 1782s Reading state information... 1782s The following packages will be REMOVED: 1782s cloud-init* python3-configobj* python3-debconf* 1782s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 1782s After this operation, 3252 kB disk space will be freed. 1782s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 1782s Removing cloud-init (24.1.1-0ubuntu1) ... 1783s Removing python3-configobj (5.0.8-3) ... 1783s Removing python3-debconf (1.5.86) ... 1783s Processing triggers for man-db (2.12.0-3) ... 1783s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71476 files and directories currently installed.) 1783s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 1784s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 1784s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 1784s invoke-rc.d: policy-rc.d denied execution of try-restart. 1784s Reading package lists... 1784s Building dependency tree... 1784s Reading state information... 1784s linux-generic is already the newest version (6.8.0-11.11+1). 1784s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1785s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 1785s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 1785s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 1787s Reading package lists... 1787s Reading package lists... 1787s Building dependency tree... 1787s Reading state information... 1787s Calculating upgrade... 1787s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1787s Reading package lists... 1788s Building dependency tree... 1788s Reading state information... 1788s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1788s autopkgtest [12:25:19]: rebooting testbed after setup commands that affected boot 1977s Note, using file '/tmp/autopkgtest.UU1lD8/3-autopkgtest-satdep.dsc' to get the build dependencies 1977s Reading package lists... 1978s Building dependency tree... 1978s Reading state information... 1978s Starting pkgProblemResolver with broken count: 0 1978s Starting 2 pkgProblemResolver with broken count: 0 1978s Done 1978s The following NEW packages will be installed: 1978s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu g++ 1978s g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 1978s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu libasan8 libatomic1 1978s libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev libgomp1 1978s libhwasan0 libisl23 libitm1 liblsan0 libmpc3 libnsl-dev libquadmath0 1978s libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 linux-libc-dev python3-all 1978s python3-importlib-metadata python3-more-itertools python3-pyfaidx 1978s python3-zipp rpcsvc-proto 1978s 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. 1978s Need to get 66.5 MB of archives. 1978s After this operation, 245 MB of additional disk space will be used. 1978s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 1978s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 1979s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 1979s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 1979s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 1979s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 1979s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 1979s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 1979s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 1979s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 1979s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 1979s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 1979s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 1979s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 1979s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 1979s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 1979s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 1979s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 1979s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 1979s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 1979s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 1979s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 1979s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 1979s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 1979s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 1979s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 1979s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 1979s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 1979s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 1979s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 1979s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 1979s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 1979s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 1979s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 1979s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 python3-all amd64 3.12.1-0ubuntu2 [906 B] 1979s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 python3-more-itertools all 10.2.0-1 [52.9 kB] 1979s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 python3-zipp all 1.0.0-6 [6090 B] 1979s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 python3-importlib-metadata all 4.12.0-1 [17.8 kB] 1979s Get:39 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pyfaidx all 0.8.1.1-1 [29.6 kB] 1979s Fetched 66.5 MB in 0s (143 MB/s) 1979s Selecting previously unselected package libc-dev-bin. 1980s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71421 files and directories currently installed.) 1980s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 1980s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 1980s Selecting previously unselected package linux-libc-dev:amd64. 1980s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_amd64.deb ... 1980s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 1980s Selecting previously unselected package libcrypt-dev:amd64. 1980s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 1980s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 1980s Selecting previously unselected package libtirpc-dev:amd64. 1980s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 1980s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 1980s Selecting previously unselected package libnsl-dev:amd64. 1980s Preparing to unpack .../04-libnsl-dev_1.3.0-3_amd64.deb ... 1980s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 1980s Selecting previously unselected package rpcsvc-proto. 1980s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 1980s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 1980s Selecting previously unselected package libc6-dev:amd64. 1980s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_amd64.deb ... 1980s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 1980s Selecting previously unselected package libisl23:amd64. 1980s Preparing to unpack .../07-libisl23_0.26-3_amd64.deb ... 1980s Unpacking libisl23:amd64 (0.26-3) ... 1980s Selecting previously unselected package libmpc3:amd64. 1980s Preparing to unpack .../08-libmpc3_1.3.1-1_amd64.deb ... 1980s Unpacking libmpc3:amd64 (1.3.1-1) ... 1980s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 1980s Preparing to unpack .../09-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1980s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1980s Selecting previously unselected package cpp-13. 1980s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 1980s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 1980s Selecting previously unselected package cpp-x86-64-linux-gnu. 1980s Preparing to unpack .../11-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1980s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1980s Selecting previously unselected package cpp. 1980s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 1980s Unpacking cpp (4:13.2.0-7ubuntu1) ... 1980s Selecting previously unselected package libcc1-0:amd64. 1980s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 1980s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 1980s Selecting previously unselected package libgomp1:amd64. 1980s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 1980s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 1980s Selecting previously unselected package libitm1:amd64. 1980s Preparing to unpack .../15-libitm1_14-20240303-1ubuntu1_amd64.deb ... 1980s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 1980s Selecting previously unselected package libatomic1:amd64. 1980s Preparing to unpack .../16-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 1980s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package libasan8:amd64. 1981s Preparing to unpack .../17-libasan8_14-20240303-1ubuntu1_amd64.deb ... 1981s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package liblsan0:amd64. 1981s Preparing to unpack .../18-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 1981s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package libtsan2:amd64. 1981s Preparing to unpack .../19-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 1981s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package libubsan1:amd64. 1981s Preparing to unpack .../20-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 1981s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package libhwasan0:amd64. 1981s Preparing to unpack .../21-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 1981s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package libquadmath0:amd64. 1981s Preparing to unpack .../22-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 1981s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 1981s Selecting previously unselected package libgcc-13-dev:amd64. 1981s Preparing to unpack .../23-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1981s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 1981s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 1981s Preparing to unpack .../24-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1981s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1981s Selecting previously unselected package gcc-13. 1981s Preparing to unpack .../25-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 1981s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 1981s Selecting previously unselected package gcc-x86-64-linux-gnu. 1981s Preparing to unpack .../26-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1981s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1981s Selecting previously unselected package gcc. 1981s Preparing to unpack .../27-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 1981s Unpacking gcc (4:13.2.0-7ubuntu1) ... 1981s Selecting previously unselected package libstdc++-13-dev:amd64. 1981s Preparing to unpack .../28-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 1981s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 1982s Selecting previously unselected package g++-13-x86-64-linux-gnu. 1982s Preparing to unpack .../29-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 1982s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1982s Selecting previously unselected package g++-13. 1982s Preparing to unpack .../30-g++-13_13.2.0-17ubuntu2_amd64.deb ... 1982s Unpacking g++-13 (13.2.0-17ubuntu2) ... 1982s Selecting previously unselected package g++-x86-64-linux-gnu. 1982s Preparing to unpack .../31-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 1982s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1982s Selecting previously unselected package g++. 1982s Preparing to unpack .../32-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 1982s Unpacking g++ (4:13.2.0-7ubuntu1) ... 1982s Selecting previously unselected package build-essential. 1982s Preparing to unpack .../33-build-essential_12.10ubuntu1_amd64.deb ... 1982s Unpacking build-essential (12.10ubuntu1) ... 1982s Selecting previously unselected package python3-all. 1982s Preparing to unpack .../34-python3-all_3.12.1-0ubuntu2_amd64.deb ... 1982s Unpacking python3-all (3.12.1-0ubuntu2) ... 1982s Selecting previously unselected package python3-more-itertools. 1982s Preparing to unpack .../35-python3-more-itertools_10.2.0-1_all.deb ... 1982s Unpacking python3-more-itertools (10.2.0-1) ... 1982s Selecting previously unselected package python3-zipp. 1982s Preparing to unpack .../36-python3-zipp_1.0.0-6_all.deb ... 1982s Unpacking python3-zipp (1.0.0-6) ... 1982s Selecting previously unselected package python3-importlib-metadata. 1982s Preparing to unpack .../37-python3-importlib-metadata_4.12.0-1_all.deb ... 1982s Unpacking python3-importlib-metadata (4.12.0-1) ... 1982s Selecting previously unselected package python3-pyfaidx. 1982s Preparing to unpack .../38-python3-pyfaidx_0.8.1.1-1_all.deb ... 1982s Unpacking python3-pyfaidx (0.8.1.1-1) ... 1982s Setting up python3-more-itertools (10.2.0-1) ... 1982s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 1982s Setting up python3-all (3.12.1-0ubuntu2) ... 1982s Setting up python3-zipp (1.0.0-6) ... 1982s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 1982s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 1982s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libmpc3:amd64 (1.3.1-1) ... 1982s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libnsl-dev:amd64 (1.3.0-3) ... 1982s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 1982s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libisl23:amd64 (0.26-3) ... 1982s Setting up libc-dev-bin (2.39-0ubuntu2) ... 1982s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 1982s Setting up python3-importlib-metadata (4.12.0-1) ... 1982s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1982s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 1982s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 1982s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 1982s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1982s Setting up python3-pyfaidx (0.8.1.1-1) ... 1983s Setting up cpp-13 (13.2.0-17ubuntu2) ... 1983s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1983s Setting up gcc-13 (13.2.0-17ubuntu2) ... 1983s Setting up cpp (4:13.2.0-7ubuntu1) ... 1983s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 1983s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1983s Setting up gcc (4:13.2.0-7ubuntu1) ... 1983s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 1983s Setting up g++-13 (13.2.0-17ubuntu2) ... 1983s Setting up g++ (4:13.2.0-7ubuntu1) ... 1983s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1983s Setting up build-essential (12.10ubuntu1) ... 1983s Processing triggers for man-db (2.12.0-3) ... 1984s Processing triggers for libc-bin (2.39-0ubuntu2) ... 1988s Reading package lists... 1988s Building dependency tree... 1988s Reading state information... 1988s Starting pkgProblemResolver with broken count: 0 1989s Starting 2 pkgProblemResolver with broken count: 0 1989s Done 1989s The following NEW packages will be installed: 1989s autopkgtest-satdep 1989s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 1989s Need to get 0 B/700 B of archives. 1989s After this operation, 0 B of additional disk space will be used. 1989s Get:1 /tmp/autopkgtest.UU1lD8/4-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B] 1989s Selecting previously unselected package autopkgtest-satdep. 1989s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74461 files and directories currently installed.) 1989s Preparing to unpack .../4-autopkgtest-satdep.deb ... 1989s Unpacking autopkgtest-satdep (0) ... 1989s Setting up autopkgtest-satdep (0) ... 1990s autopkgtest: WARNING: package python3-pyfaidx:i386 is not installed though it should be 1991s (Reading database ... 74461 files and directories currently installed.) 1991s Removing autopkgtest-satdep (0) ... 1991s autopkgtest [12:28:42]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import pyfaidx; print(pyfaidx)" ; done 1991s autopkgtest [12:28:42]: test autodep8-python3: [----------------------- 1991s Testing with python3.12: 1991s 1992s autopkgtest [12:28:43]: test autodep8-python3: -----------------------] 1992s autopkgtest [12:28:43]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 1992s autodep8-python3 PASS (superficial) 1992s autopkgtest [12:28:43]: @@@@@@@@@@@@@@@@@@@@ summary 1992s run-unit-test PASS 1992s autodep8-python3 PASS (superficial) 2002s Creating nova instance adt-noble-i386-python-pyfaidx-20240321-115530-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)... 2002s Creating nova instance adt-noble-i386-python-pyfaidx-20240321-115530-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)...