0s autopkgtest [12:04:19]: starting date and time: 2024-03-21 12:04:19+0000 0s autopkgtest [12:04:19]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [12:04:19]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.xs3_0qeq/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:h5py --apt-upgrade pycoqc --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=h5py/3.10.0-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-34.secgroup --name adt-noble-i386-pycoqc-20240321-120419-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 342s autopkgtest [12:10:01]: testbed dpkg architecture: amd64 342s autopkgtest [12:10:01]: testbed apt version: 2.7.12 342s autopkgtest [12:10:01]: test architecture: i386 342s autopkgtest [12:10:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 343s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 343s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 343s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 343s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 343s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3770 kB] 343s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [459 kB] 343s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [695 kB] 343s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 343s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 343s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 343s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 343s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1281 kB] 343s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 343s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 343s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 343s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 343s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 346s Fetched 11.3 MB in 2s (7095 kB/s) 347s Reading package lists... 349s Reading package lists... 349s Building dependency tree... 349s Reading state information... 349s Calculating upgrade... 349s The following packages will be upgraded: 349s debianutils linux-firmware 349s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 349s Need to get 476 MB of archives. 349s After this operation, 5724 kB of additional disk space will be used. 349s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.17 [89.8 kB] 349s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-firmware amd64 20240318.git3b128b60-0ubuntu1 [475 MB] 353s Fetched 476 MB in 3s (140 MB/s) 353s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 354s Preparing to unpack .../debianutils_5.17_amd64.deb ... 354s Unpacking debianutils (5.17) over (5.16) ... 354s Setting up debianutils (5.17) ... 354s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 354s Preparing to unpack .../linux-firmware_20240318.git3b128b60-0ubuntu1_amd64.deb ... 354s Unpacking linux-firmware (20240318.git3b128b60-0ubuntu1) over (20240202.git36777504-0ubuntu1) ... 357s Setting up linux-firmware (20240318.git3b128b60-0ubuntu1) ... 357s Processing triggers for man-db (2.12.0-3) ... 358s Processing triggers for initramfs-tools (0.142ubuntu20) ... 358s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 358s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 367s Reading package lists... 367s Building dependency tree... 367s Reading state information... 367s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 368s sh: Attempting to set up Debian/Ubuntu apt sources automatically 368s sh: Distribution appears to be Ubuntu 369s Reading package lists... 369s Building dependency tree... 369s Reading state information... 370s eatmydata is already the newest version (131-1). 370s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 370s Reading package lists... 370s Building dependency tree... 370s Reading state information... 370s dbus is already the newest version (1.14.10-4ubuntu1). 370s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 370s Reading package lists... 370s Building dependency tree... 370s Reading state information... 371s rng-tools-debian is already the newest version (2.4). 371s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 371s Reading package lists... 371s Building dependency tree... 371s Reading state information... 371s The following packages will be REMOVED: 371s cloud-init* python3-configobj* python3-debconf* 372s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 372s After this operation, 3252 kB disk space will be freed. 372s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 372s Removing cloud-init (24.1.1-0ubuntu1) ... 372s Removing python3-configobj (5.0.8-3) ... 372s Removing python3-debconf (1.5.86) ... 372s Processing triggers for man-db (2.12.0-3) ... 373s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71476 files and directories currently installed.) 373s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 373s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 373s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 373s invoke-rc.d: policy-rc.d denied execution of try-restart. 373s Reading package lists... 374s Building dependency tree... 374s Reading state information... 374s linux-generic is already the newest version (6.8.0-11.11+1). 374s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 374s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 374s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 374s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 376s Reading package lists... 376s Reading package lists... 377s Building dependency tree... 377s Reading state information... 377s Calculating upgrade... 377s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 377s Reading package lists... 377s Building dependency tree... 377s Reading state information... 378s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 378s autopkgtest [12:10:37]: rebooting testbed after setup commands that affected boot 394s autopkgtest [12:10:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 395s autopkgtest [12:10:54]: @@@@@@@@@@@@@@@@@@@@ apt-source pycoqc 397s Get:1 http://ftpmaster.internal/ubuntu noble/universe pycoqc 2.5.2+dfsg-3 (dsc) [2051 B] 397s Get:2 http://ftpmaster.internal/ubuntu noble/universe pycoqc 2.5.2+dfsg-3 (tar) [41.6 MB] 397s Get:3 http://ftpmaster.internal/ubuntu noble/universe pycoqc 2.5.2+dfsg-3 (diff) [6764 B] 397s gpgv: Signature made Tue Dec 7 15:51:27 2021 UTC 397s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 397s gpgv: issuer "tille@debian.org" 397s gpgv: Can't check signature: No public key 397s dpkg-source: warning: cannot verify inline signature for ./pycoqc_2.5.2+dfsg-3.dsc: no acceptable signature found 399s autopkgtest [12:10:58]: testing package pycoqc version 2.5.2+dfsg-3 400s autopkgtest [12:10:59]: build not needed 400s autopkgtest [12:10:59]: test run-unit-test: preparing testbed 403s Note, using file '/tmp/autopkgtest.JlS77n/1-autopkgtest-satdep.dsc' to get the build dependencies 403s Reading package lists... 403s Building dependency tree... 403s Reading state information... 404s Starting pkgProblemResolver with broken count: 0 404s Starting 2 pkgProblemResolver with broken count: 0 404s Done 404s The following NEW packages will be installed: 404s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu g++ 404s g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 404s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu libaec0 libasan8 libatomic1 404s libblas3 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdeflate0 404s libgcc-13-dev libgfortran5 libgomp1 libhdf5-103-1 libhdf5-hl-100 libhts3 404s libhtscodecs2 libhwasan0 libisl23 libitm1 liblapack3 liblbfgsb0 liblsan0 404s liblzf1 libmpc3 libnsl-dev libquadmath0 libstdc++-13-dev libsz2 libtirpc-dev 404s libtsan2 libubsan1 linux-libc-dev pycoqc python3-dateutil python3-decorator 404s python3-fastjsonschema python3-h5py python3-h5py-serial python3-jupyter-core 404s python3-nbformat python3-numpy python3-pandas python3-pandas-lib 404s python3-platformdirs python3-plotly python3-pysam python3-scipy 404s python3-tenacity python3-tqdm python3-traitlets rpcsvc-proto 404s 0 upgraded, 64 newly installed, 0 to remove and 0 not upgraded. 404s Need to get 119 MB of archives. 404s After this operation, 560 MB of additional disk space will be used. 404s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 404s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 404s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 404s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 404s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 404s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 404s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 404s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 404s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 404s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 404s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 404s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 404s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 404s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 404s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 404s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 404s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 404s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 404s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 404s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 404s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 404s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 404s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 404s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 404s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 405s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 405s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 405s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 405s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 405s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 405s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 405s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 405s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 405s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 405s Get:35 http://ftpmaster.internal/ubuntu noble/universe amd64 libaec0 amd64 1.1.2-1 [22.6 kB] 405s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 405s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 405s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 405s Get:39 http://ftpmaster.internal/ubuntu noble/universe amd64 libsz2 amd64 1.1.2-1 [5416 B] 405s Get:40 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-103-1 amd64 1.10.10+repack-3ubuntu1 [1327 kB] 405s Get:41 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-hl-100 amd64 1.10.10+repack-3ubuntu1 [56.2 kB] 405s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 libhtscodecs2 amd64 1.6.0-1 [98.9 kB] 405s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 libhts3 amd64 1.18+ds-1 [428 kB] 405s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 405s Get:45 http://ftpmaster.internal/ubuntu noble/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [30.4 kB] 405s Get:46 http://ftpmaster.internal/ubuntu noble/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 405s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 python3-numpy amd64 1:1.24.2-2 [7141 kB] 405s Get:48 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-h5py-serial amd64 3.10.0-1ubuntu1 [1510 kB] 405s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 python3-dateutil all 2.8.2-3 [79.2 kB] 405s Get:50 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pandas-lib amd64 2.1.4+dfsg-4ubuntu2 [8348 kB] 405s Get:51 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 405s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 405s Get:53 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-fastjsonschema all 2.19.0-1 [19.6 kB] 405s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-platformdirs all 4.2.0-1 [16.1 kB] 405s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-traitlets all 5.5.0-2 [85.0 kB] 405s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-jupyter-core all 5.3.2-1ubuntu1 [25.5 kB] 405s Get:57 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-nbformat all 5.9.1-1 [41.2 kB] 405s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 python3-tenacity all 8.2.3-2 [14.8 kB] 405s Get:59 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-plotly all 5.15.0+dfsg1-1 [2222 kB] 405s Get:60 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pysam amd64 0.22.0+ds-1 [4556 kB] 405s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-scipy amd64 1.11.4-6 [19.4 MB] 405s Get:62 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-tqdm all 4.64.1-2 [95.2 kB] 405s Get:63 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-h5py all 3.10.0-1ubuntu1 [7970 B] 405s Get:64 http://ftpmaster.internal/ubuntu noble/universe amd64 pycoqc all 2.5.2+dfsg-3 [36.4 kB] 406s Fetched 119 MB in 1s (120 MB/s) 406s Selecting previously unselected package libc-dev-bin. 406s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71421 files and directories currently installed.) 406s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 406s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 406s Selecting previously unselected package linux-libc-dev:amd64. 406s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_amd64.deb ... 406s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 407s Selecting previously unselected package libcrypt-dev:amd64. 407s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 407s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 407s Selecting previously unselected package libtirpc-dev:amd64. 407s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 407s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 407s Selecting previously unselected package libnsl-dev:amd64. 407s Preparing to unpack .../04-libnsl-dev_1.3.0-3_amd64.deb ... 407s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 407s Selecting previously unselected package rpcsvc-proto. 407s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 407s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 407s Selecting previously unselected package libc6-dev:amd64. 407s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_amd64.deb ... 407s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 407s Selecting previously unselected package libisl23:amd64. 407s Preparing to unpack .../07-libisl23_0.26-3_amd64.deb ... 407s Unpacking libisl23:amd64 (0.26-3) ... 407s Selecting previously unselected package libmpc3:amd64. 407s Preparing to unpack .../08-libmpc3_1.3.1-1_amd64.deb ... 407s Unpacking libmpc3:amd64 (1.3.1-1) ... 407s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 407s Preparing to unpack .../09-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 407s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 407s Selecting previously unselected package cpp-13. 407s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 407s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 407s Selecting previously unselected package cpp-x86-64-linux-gnu. 407s Preparing to unpack .../11-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 407s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 407s Selecting previously unselected package cpp. 407s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 407s Unpacking cpp (4:13.2.0-7ubuntu1) ... 407s Selecting previously unselected package libcc1-0:amd64. 407s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 407s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 407s Selecting previously unselected package libgomp1:amd64. 407s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 407s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 407s Selecting previously unselected package libitm1:amd64. 407s Preparing to unpack .../15-libitm1_14-20240303-1ubuntu1_amd64.deb ... 407s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 407s Selecting previously unselected package libatomic1:amd64. 407s Preparing to unpack .../16-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 407s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 407s Selecting previously unselected package libasan8:amd64. 407s Preparing to unpack .../17-libasan8_14-20240303-1ubuntu1_amd64.deb ... 407s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 407s Selecting previously unselected package liblsan0:amd64. 407s Preparing to unpack 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previously unselected package libhdf5-103-1:amd64. 409s Preparing to unpack .../39-libhdf5-103-1_1.10.10+repack-3ubuntu1_amd64.deb ... 409s Unpacking libhdf5-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 409s Selecting previously unselected package libhdf5-hl-100:amd64. 409s Preparing to unpack .../40-libhdf5-hl-100_1.10.10+repack-3ubuntu1_amd64.deb ... 409s Unpacking libhdf5-hl-100:amd64 (1.10.10+repack-3ubuntu1) ... 409s Selecting previously unselected package libhtscodecs2:amd64. 409s Preparing to unpack .../41-libhtscodecs2_1.6.0-1_amd64.deb ... 409s Unpacking libhtscodecs2:amd64 (1.6.0-1) ... 409s Selecting previously unselected package libhts3:amd64. 409s Preparing to unpack .../42-libhts3_1.18+ds-1_amd64.deb ... 409s Unpacking libhts3:amd64 (1.18+ds-1) ... 409s Selecting previously unselected package liblapack3:amd64. 409s Preparing to unpack .../43-liblapack3_3.12.0-3_amd64.deb ... 409s Unpacking liblapack3:amd64 (3.12.0-3) ... 409s Selecting previously unselected package liblbfgsb0:amd64. 409s Preparing to unpack .../44-liblbfgsb0_3.0+dfsg.4-1_amd64.deb ... 409s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1) ... 409s Selecting previously unselected package liblzf1:amd64. 409s Preparing to unpack .../45-liblzf1_3.6-4_amd64.deb ... 409s Unpacking liblzf1:amd64 (3.6-4) ... 409s Selecting previously unselected package python3-numpy. 409s Preparing to unpack .../46-python3-numpy_1%3a1.24.2-2_amd64.deb ... 409s Unpacking python3-numpy (1:1.24.2-2) ... 409s Selecting previously unselected package python3-h5py-serial. 409s Preparing to unpack .../47-python3-h5py-serial_3.10.0-1ubuntu1_amd64.deb ... 409s Unpacking python3-h5py-serial (3.10.0-1ubuntu1) ... 409s Selecting previously unselected package python3-dateutil. 409s Preparing to unpack .../48-python3-dateutil_2.8.2-3_all.deb ... 409s Unpacking python3-dateutil (2.8.2-3) ... 409s Selecting previously unselected package python3-pandas-lib:amd64. 409s Preparing to unpack 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(0.22.0+ds-1) ... 412s Selecting previously unselected package python3-scipy. 412s Preparing to unpack .../60-python3-scipy_1.11.4-6_amd64.deb ... 412s Unpacking python3-scipy (1.11.4-6) ... 413s Selecting previously unselected package python3-tqdm. 413s Preparing to unpack .../61-python3-tqdm_4.64.1-2_all.deb ... 413s Unpacking python3-tqdm (4.64.1-2) ... 413s Selecting previously unselected package python3-h5py. 413s Preparing to unpack .../62-python3-h5py_3.10.0-1ubuntu1_all.deb ... 413s Unpacking python3-h5py (3.10.0-1ubuntu1) ... 413s Selecting previously unselected package pycoqc. 413s Preparing to unpack .../63-pycoqc_2.5.2+dfsg-3_all.deb ... 413s Unpacking pycoqc (2.5.2+dfsg-3) ... 413s Setting up libhtscodecs2:amd64 (1.6.0-1) ... 413s Setting up python3-tenacity (8.2.3-2) ... 413s Setting up python3-tqdm (4.64.1-2) ... 413s Setting up libdeflate0:amd64 (1.19-1) ... 413s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 413s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 413s Setting up libaec0:amd64 (1.1.2-1) ... 413s Setting up python3-platformdirs (4.2.0-1) ... 413s Setting up python3-decorator (5.1.1-5) ... 413s Setting up libblas3:amd64 (3.12.0-3) ... 413s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 413s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 413s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 413s Setting up liblzf1:amd64 (3.6-4) ... 413s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 413s Setting up libmpc3:amd64 (1.3.1-1) ... 413s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 413s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 413s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 413s Setting up python3-fastjsonschema (2.19.0-1) ... 413s Setting up libnsl-dev:amd64 (1.3.0-3) ... 413s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 413s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 413s Setting up python3-traitlets (5.5.0-2) ... 414s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 414s Setting up python3-dateutil (2.8.2-3) ... 414s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 414s Setting up libisl23:amd64 (0.26-3) ... 414s Setting up libc-dev-bin (2.39-0ubuntu2) ... 414s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 414s Setting up python3-jupyter-core (5.3.2-1ubuntu1) ... 414s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 414s Setting up libsz2:amd64 (1.1.2-1) ... 414s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 414s Setting up liblapack3:amd64 (3.12.0-3) ... 414s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 414s Setting up libhts3:amd64 (1.18+ds-1) ... 414s Setting up python3-pysam (0.22.0+ds-1) ... 414s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 414s Setting up python3-nbformat (5.9.1-1) ... 414s Setting up python3-plotly (5.15.0+dfsg1-1) ... 423s Setting up python3-numpy (1:1.24.2-2) ... 423s Setting up libhdf5-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 423s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 423s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 423s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 423s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... 423s Setting up libhdf5-hl-100:amd64 (1.10.10+repack-3ubuntu1) ... 423s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 423s Setting up python3-scipy (1.11.4-6) ... 424s Setting up cpp-13 (13.2.0-17ubuntu2) ... 424s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 424s Setting up python3-pandas-lib:amd64 (2.1.4+dfsg-4ubuntu2) ... 424s Setting up python3-h5py-serial (3.10.0-1ubuntu1) ... 424s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 428s Setting up python3-h5py (3.10.0-1ubuntu1) ... 428s Setting up gcc-13 (13.2.0-17ubuntu2) ... 428s Setting up cpp (4:13.2.0-7ubuntu1) ... 428s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 428s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 428s Setting up pycoqc (2.5.2+dfsg-3) ... 428s Setting up gcc (4:13.2.0-7ubuntu1) ... 428s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 428s Setting up g++-13 (13.2.0-17ubuntu2) ... 428s Setting up g++ (4:13.2.0-7ubuntu1) ... 428s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 428s Setting up build-essential (12.10ubuntu1) ... 428s Processing triggers for man-db (2.12.0-3) ... 429s Processing triggers for libc-bin (2.39-0ubuntu2) ... 435s Reading package lists... 435s Building dependency tree... 435s Reading state information... 435s Starting pkgProblemResolver with broken count: 0 436s Starting 2 pkgProblemResolver with broken count: 0 436s Done 436s The following NEW packages will be installed: 436s autopkgtest-satdep 436s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 436s Need to get 0 B/696 B of archives. 436s After this operation, 0 B of additional disk space will be used. 436s Get:1 /tmp/autopkgtest.JlS77n/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 437s Selecting previously unselected package autopkgtest-satdep. 437s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 93235 files and directories currently installed.) 437s Preparing to unpack .../2-autopkgtest-satdep.deb ... 437s Unpacking autopkgtest-satdep (0) ... 437s Setting up autopkgtest-satdep (0) ... 438s (Reading database ... 93235 files and directories currently installed.) 438s Removing autopkgtest-satdep (0) ... 438s autopkgtest [12:11:37]: test run-unit-test: [----------------------- 439s Test 1 440s Checking arguments values 440s Check input data files 440s Parse data files 440s Merge data 440s Cleaning data 440s Loading plotting interface 440s PASS 440s 440s Test 2 441s Checking arguments values 441s Check input data files 441s Parse data files 441s Merge data 441s Cleaning data 441s Loading plotting interface 442s PASS 442s 442s Test 3 442s Checking arguments values 442s Check input data files 442s Parse data files 442s Merge data 442s Cleaning data 442s Loading plotting interface 443s PASS 443s 443s Test 4 444s Checking arguments values 444s Check input data files 444s Parse data files 444s Merge data 444s Cleaning data 444s Loading plotting interface 445s PASS 445s 445s Test 5 445s Checking arguments values 445s Check input data files 445s Parse data files 445s Merge data 445s Cleaning data 445s Loading plotting interface 446s PASS 446s 446s Test 6 447s PASS 447s 447s Test 7 447s Checking arguments values 447s Check input data files 447s Parse data files 447s Merge data 447s Cleaning data 447s Loading plotting interface 448s PASS 448s 448s Test 8 449s 0 reads [00:00, ? reads/s] 22 reads [00:00, 994.05 reads/s] 449s Total reads: 22 / Average speed: 579.8 reads/s 449s 449s read_id run_id channel start_time sequence_length_template mean_qscore_template calibration_strand_genome_template 449s 08642be5-5cf7-4c4c-8c45-e4d569b9a482 40ebe55356ada6c830fa793745ef4c498d896c73 121 28 450 7.805 filtered_out 449s e6a8e4d0-7b3c-471a-be26-fa7857d12663 40ebe55356ada6c830fa793745ef4c498d896c73 318 15 392 8.304 filtered_out 449s 3e81c32a-f2ee-4719-a88d-e0affe93d26f 40ebe55356ada6c830fa793745ef4c498d896c73 348 24 1137 8.124 filtered_out 449s 1f83ee80-ac29-46be-b8bc-9dc9325f1fa7 40ebe55356ada6c830fa793745ef4c498d896c73 382 35 819 7.414 filtered_out 449s 68804104-71dc-465c-b82d-3a99a4689701 40ebe55356ada6c830fa793745ef4c498d896c73 38 20 1010 8.325 filtered_out 449s 3784283c-47cc-48ac-8d7b-7efd32123b56 40ebe55356ada6c830fa793745ef4c498d896c73 243 20 893 8.54 filtered_out 449s f8325de9-a77e-4616-a4a8-69ecf32e1688 40ebe55356ada6c830fa793745ef4c498d896c73 354 16 568 8.206 filtered_out 449s 37dfa1d5-5d84-486c-bf47-9eb6438f5645 40ebe55356ada6c830fa793745ef4c498d896c73 410 30 555 8.219 filtered_out 449s 5b7fadd0-c646-4c7b-9800-66ee658a5ca8 40ebe55356ada6c830fa793745ef4c498d896c73 150 37 468 7.608 filtered_out 449s PASS 449s 449s Test 9 449s Check input data and options 449s Start processing fast5 files 449s 0 reads [00:00, ? reads/s] 22 reads [00:00, 2032.93 reads/s] 449s Overall counts valid files: 22 449s 449s fields found mean_qscore_template: 22 449s called_events: 22 449s duration: 22 449s strand_score: 22 449s 449s fields not found 449s Total reads: 22 / Average speed: 978.98 reads/s 449s 449s mean_qscore_template called_events duration strand_score 449s 7.805 1438 21583 -0.0006 449s 8.304 1547 23218 -0.0008 449s 7.414 3017 45267 -0.0002 449s 8.54 2023 30405 -0.0003 449s 8.124 2978 44675 -0.0005 449s 8.325 3846 57697 -0.0004 449s 8.219 2080 31208 -0.0011 449s 8.206 1649 24747 -0.0009 449s 8.741 3117 46767 -0.0006 449s PASS 449s 449s Test 10 450s Check input data and options 450s Start processing fast5 files 450s 0 reads [00:00, ? reads/s] 22 reads [00:00, 2455.55 reads/s] 450s Overall counts valid files: 22 450s 450s fields found read_id: 22 450s run_id: 22 450s channel: 22 450s start_time: 22 450s sequence_length_template: 22 450s mean_qscore_template: 22 450s calibration_strand_genome_template: 22 450s 450s fields not found barcode_arrangement: 22 450s 450s Total reads: 22 / Average speed: 787.44 reads/s 450s 450s read_id run_id channel start_time sequence_length_template mean_qscore_template calibration_strand_genome_template path 450s 08642be5-5cf7-4c4c-8c45-e4d569b9a482 40ebe55356ada6c830fa793745ef4c498d896c73 121 28 450 7.805 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_121_strand.fast5 450s 3e81c32a-f2ee-4719-a88d-e0affe93d26f 40ebe55356ada6c830fa793745ef4c498d896c73 348 24 1137 8.124 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_348_strand.fast5 450s e6a8e4d0-7b3c-471a-be26-fa7857d12663 40ebe55356ada6c830fa793745ef4c498d896c73 318 15 392 8.304 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_318_strand.fast5 450s 1f83ee80-ac29-46be-b8bc-9dc9325f1fa7 40ebe55356ada6c830fa793745ef4c498d896c73 382 35 819 7.414 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_382_strand.fast5 450s 3784283c-47cc-48ac-8d7b-7efd32123b56 40ebe55356ada6c830fa793745ef4c498d896c73 243 20 893 8.54 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_243_strand.fast5 450s f8325de9-a77e-4616-a4a8-69ecf32e1688 40ebe55356ada6c830fa793745ef4c498d896c73 354 16 568 8.206 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_354_strand.fast5 450s 5b7fadd0-c646-4c7b-9800-66ee658a5ca8 40ebe55356ada6c830fa793745ef4c498d896c73 150 37 468 7.608 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_150_strand.fast5 450s 68804104-71dc-465c-b82d-3a99a4689701 40ebe55356ada6c830fa793745ef4c498d896c73 38 20 1010 8.325 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_38_strand.fast5 450s 37dfa1d5-5d84-486c-bf47-9eb6438f5645 40ebe55356ada6c830fa793745ef4c498d896c73 410 30 555 8.219 filtered_out /tmp/autopkgtest.JlS77n/autopkgtest_tmp/datafast5/20180625_FAH77625_MN23126_sequencing_run_S1_57529_read_10_ch_410_strand.fast5 450s PASS 450s 450s Test 11 451s Import data from sequencing summary file(s) and cleanup 451s Read files and import in a dataframe 451s Check input data files 451s Parse data files 451s Merge data 451s Cleanup missing barcodes values 451s Cleaning up low frequency barcodes 451s Split data per barcode 451s Processing data for Barcode barcode02 451s Processing data for Barcode barcode07 451s Processing data for Barcode barcode08 451s Processing data for Barcode barcode09 451s Processing data for Barcode barcode10 451s Processing data for Barcode barcode11 451s Processing data for Barcode barcode12 452s Processing data for Barcode unclassified 452s Barcode Counts 452s Counts Write 452s barcode02 2 False 452s barcode07 1 False 452s barcode08 30 False 452s barcode09 9945 True 452s barcode10 12644 True 452s barcode11 13594 True 452s barcode12 9813 True 452s unclassified 3971 False 452s PASS 452s 452s Test 12 452s General info 452s package_name: pycoQC 452s package_version: 2.5.2 452s timestamp: 2024-03-21 12:11:51.650261 452s 452s Runtime options 452s summary_file: ['Guppy-basecall-1D-DNA_sequencing_summary.txt'] 452s barcode_file: ['Guppy-basecall-1D-DNA_deepbinner_barcoding_summary.txt'] 452s output_dir: results/ 452s output_unclassified: False 452s min_barcode_percent: 0.1 452s verbose: True 452s quiet: False 452s 452s Import data from sequencing summary file(s) and cleanup 452s Read files and import in a dataframe 452s Check input data files 452s Sequencing summary files found: Guppy-basecall-1D-DNA_sequencing_summary.txt 452s Barcode files found: Guppy-basecall-1D-DNA_deepbinner_barcoding_summary.txt 452s Parse data files 452s Parse summary files 452s 3,999 reads found in initial file 452s Parse barcode files 452s Found valid Deepbinner barcode file 452s 3,775 reads with barcodes assigned 452s Merge data 452s Cleanup missing barcodes values 452s Cleaning up low frequency barcodes 452s Split data per barcode 452s Processing data for Barcode 1 452s Processing data for Barcode 2 452s Processing data for Barcode 3 452s Processing data for Barcode 4 452s Processing data for Barcode 5 452s Processing data for Barcode 6 452s Processing data for Barcode 7 452s Processing data for Barcode 8 452s Processing data for Barcode unclassified 452s Barcode Counts 452s Counts Write 452s 1 534 True 452s 2 206 True 452s 3 562 True 452s 4 579 True 452s 5 590 True 452s 6 655 True 452s 7 271 True 452s 8 378 True 452s unclassified 224 False 452s PASS 452s 452s Check if files really exist 452s PASS 452s 453s autopkgtest [12:11:52]: test run-unit-test: -----------------------] 453s autopkgtest [12:11:52]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 453s run-unit-test PASS 453s autopkgtest [12:11:52]: @@@@@@@@@@@@@@@@@@@@ summary 453s run-unit-test PASS 463s Creating nova instance adt-noble-i386-pycoqc-20240321-120419-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)...