1s autopkgtest [11:36:58]: starting date and time: 2024-03-21 11:36:58+0000 1s autopkgtest [11:36:58]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 1s autopkgtest [11:36:58]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.o_pkp1o5/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:h5py --apt-upgrade dipy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=h5py/3.10.0-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-73.secgroup --name adt-noble-i386-dipy-20240321-113657-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 113s autopkgtest [11:38:50]: testbed dpkg architecture: amd64 113s autopkgtest [11:38:50]: testbed apt version: 2.7.12 113s autopkgtest [11:38:50]: test architecture: i386 113s autopkgtest [11:38:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup 113s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 113s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 113s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 113s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 113s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3770 kB] 113s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [459 kB] 113s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [695 kB] 113s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 113s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 113s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 113s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 113s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 113s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1281 kB] 113s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 113s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 113s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 113s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 117s Fetched 11.3 MB in 1s (7739 kB/s) 117s Reading package lists... 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 119s Calculating upgrade... 119s The following packages will be upgraded: 119s debianutils linux-firmware 119s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s Need to get 476 MB of archives. 119s After this operation, 5724 kB of additional disk space will be used. 119s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.17 [89.8 kB] 119s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-firmware amd64 20240318.git3b128b60-0ubuntu1 [475 MB] 123s Fetched 476 MB in 3s (142 MB/s) 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 123s Preparing to unpack .../debianutils_5.17_amd64.deb ... 123s Unpacking debianutils (5.17) over (5.16) ... 123s Setting up debianutils (5.17) ... 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 123s Preparing to unpack .../linux-firmware_20240318.git3b128b60-0ubuntu1_amd64.deb ... 123s Unpacking linux-firmware (20240318.git3b128b60-0ubuntu1) over (20240202.git36777504-0ubuntu1) ... 126s Setting up linux-firmware (20240318.git3b128b60-0ubuntu1) ... 126s Processing triggers for man-db (2.12.0-3) ... 128s Processing triggers for initramfs-tools (0.142ubuntu20) ... 128s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 128s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 136s Reading package lists... 136s Building dependency tree... 136s Reading state information... 136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 137s sh: Attempting to set up Debian/Ubuntu apt sources automatically 137s sh: Distribution appears to be Ubuntu 138s Reading package lists... 138s Building dependency tree... 138s Reading state information... 139s eatmydata is already the newest version (131-1). 139s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 139s dbus is already the newest version (1.14.10-4ubuntu1). 139s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 140s rng-tools-debian is already the newest version (2.4). 140s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s The following packages will be REMOVED: 140s cloud-init* python3-configobj* python3-debconf* 141s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 141s After this operation, 3252 kB disk space will be freed. 141s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 141s Removing cloud-init (24.1.1-0ubuntu1) ... 141s Removing python3-configobj (5.0.8-3) ... 141s Removing python3-debconf (1.5.86) ... 141s Processing triggers for man-db (2.12.0-3) ... 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71476 files and directories currently installed.) 142s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 142s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 142s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 142s invoke-rc.d: policy-rc.d denied execution of try-restart. 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s linux-generic is already the newest version (6.8.0-11.11+1). 143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 144s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 144s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 146s Reading package lists... 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s Calculating upgrade... 147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 147s autopkgtest [11:39:24]: rebooting testbed after setup commands that affected boot 176s autopkgtest [11:39:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 177s autopkgtest [11:39:54]: @@@@@@@@@@@@@@@@@@@@ apt-source dipy 178s Get:1 http://ftpmaster.internal/ubuntu noble/universe dipy 1.8.0-2ubuntu1 (dsc) [3018 B] 178s Get:2 http://ftpmaster.internal/ubuntu noble/universe dipy 1.8.0-2ubuntu1 (tar) [6494 kB] 178s Get:3 http://ftpmaster.internal/ubuntu noble/universe dipy 1.8.0-2ubuntu1 (diff) [18.7 kB] 178s gpgv: Signature made Mon Feb 12 20:21:45 2024 UTC 178s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 178s gpgv: Can't check signature: No public key 178s dpkg-source: warning: cannot verify inline signature for ./dipy_1.8.0-2ubuntu1.dsc: no acceptable signature found 179s autopkgtest [11:39:56]: testing package dipy version 1.8.0-2ubuntu1 179s autopkgtest [11:39:56]: build not needed 179s autopkgtest [11:39:56]: test run-unit-test: preparing testbed 180s autopkgtest [11:39:57]: ERROR: Failed to resolve build-deps for /tmp/autopkgtest.Xi2HWA/1-autopkgtest-satdep.dsc; apt-get output: 180s autopkgtest [11:39:57]: ERROR: | Note, using file '/tmp/autopkgtest.Xi2HWA/1-autopkgtest-satdep.dsc' to get the build dependencies 180s autopkgtest [11:39:57]: ERROR: | Reading package lists... 180s autopkgtest [11:39:57]: ERROR: | Building dependency tree... 180s autopkgtest [11:39:57]: ERROR: | Reading state information... 180s autopkgtest [11:39:57]: ERROR: | Some packages could not be installed. This may mean that you have 180s autopkgtest [11:39:57]: ERROR: | requested an impossible situation or if you are using the unstable 180s autopkgtest [11:39:57]: ERROR: | distribution that some required packages have not yet been created 180s autopkgtest [11:39:57]: ERROR: | or been moved out of Incoming. 180s autopkgtest [11:39:57]: ERROR: | The following information may help to resolve the situation: 180s autopkgtest [11:39:57]: ERROR: | 180s autopkgtest [11:39:57]: ERROR: | The following packages have unmet dependencies: 180s autopkgtest [11:39:57]: ERROR: | builddeps:/tmp/autopkgtest.Xi2HWA/1-autopkgtest-satdep.dsc : Depends: python3-dipy-lib:i386 but it is not installable 180s run-unit-test FAIL badpkg 180s blame: dipy 180s badpkg: Can't resolve build dependencies on testbed 180s autopkgtest [11:39:57]: test autodep8-python3: preparing testbed 642s autopkgtest [11:47:39]: testbed dpkg architecture: amd64 642s autopkgtest [11:47:39]: testbed apt version: 2.7.12 642s autopkgtest [11:47:39]: test architecture: i386 642s autopkgtest [11:47:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 643s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 643s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 643s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3770 kB] 643s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 643s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 643s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [695 kB] 643s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [459 kB] 643s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 643s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 643s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 643s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 643s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4237 kB] 643s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1281 kB] 643s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 643s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 643s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 643s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 646s Fetched 11.3 MB in 2s (7371 kB/s) 646s Reading package lists... 648s Reading package lists... 648s Building dependency tree... 648s Reading state information... 649s Calculating upgrade... 649s The following packages will be upgraded: 649s debianutils linux-firmware 649s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 649s Need to get 476 MB of archives. 649s After this operation, 5724 kB of additional disk space will be used. 649s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.17 [89.8 kB] 649s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-firmware amd64 20240318.git3b128b60-0ubuntu1 [475 MB] 653s Fetched 476 MB in 3s (138 MB/s) 653s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 653s Preparing to unpack .../debianutils_5.17_amd64.deb ... 653s Unpacking debianutils (5.17) over (5.16) ... 653s Setting up debianutils (5.17) ... 653s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 653s Preparing to unpack .../linux-firmware_20240318.git3b128b60-0ubuntu1_amd64.deb ... 653s Unpacking linux-firmware (20240318.git3b128b60-0ubuntu1) over (20240202.git36777504-0ubuntu1) ... 656s Setting up linux-firmware (20240318.git3b128b60-0ubuntu1) ... 656s Processing triggers for man-db (2.12.0-3) ... 657s Processing triggers for initramfs-tools (0.142ubuntu20) ... 657s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 657s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 665s Reading package lists... 665s Building dependency tree... 665s Reading state information... 665s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 666s sh: Attempting to set up Debian/Ubuntu apt sources automatically 666s sh: Distribution appears to be Ubuntu 667s Reading package lists... 667s Building dependency tree... 667s Reading state information... 667s eatmydata is already the newest version (131-1). 667s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 668s Reading package lists... 668s Building dependency tree... 668s Reading state information... 668s dbus is already the newest version (1.14.10-4ubuntu1). 668s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 668s Reading package lists... 668s Building dependency tree... 668s Reading state information... 669s rng-tools-debian is already the newest version (2.4). 669s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 669s Reading package lists... 669s Building dependency tree... 669s Reading state information... 669s The following packages will be REMOVED: 669s cloud-init* python3-configobj* python3-debconf* 670s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 670s After this operation, 3252 kB disk space will be freed. 670s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71865 files and directories currently installed.) 670s Removing cloud-init (24.1.1-0ubuntu1) ... 670s Removing python3-configobj (5.0.8-3) ... 670s Removing python3-debconf (1.5.86) ... 670s Processing triggers for man-db (2.12.0-3) ... 671s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71476 files and directories currently installed.) 671s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 671s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 671s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 671s invoke-rc.d: policy-rc.d denied execution of try-restart. 672s Reading package lists... 672s Building dependency tree... 672s Reading state information... 672s linux-generic is already the newest version (6.8.0-11.11+1). 672s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 672s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 672s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 672s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 675s Reading package lists... 675s Reading package lists... 675s Building dependency tree... 675s Reading state information... 675s Calculating upgrade... 675s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 675s Reading package lists... 676s Building dependency tree... 676s Reading state information... 676s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 676s autopkgtest [11:48:13]: rebooting testbed after setup commands that affected boot 822s Note, using file '/tmp/autopkgtest.Xi2HWA/2-autopkgtest-satdep.dsc' to get the build dependencies 822s Reading package lists... 822s Building dependency tree... 822s Reading state information... 823s Starting pkgProblemResolver with broken count: 0 823s Starting 2 pkgProblemResolver with broken count: 0 823s Done 823s The following NEW packages will be installed: 823s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu g++ 823s g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 823s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu libaec0 libasan8 libatomic1 823s libblas3 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev 823s libgfortran5 libgomp1 libhdf5-103-1 libhdf5-hl-100 libhwasan0 libisl23 823s libitm1 liblapack3 liblbfgsb0 liblsan0 liblzf1 libmpc3 libnsl-dev 823s libquadmath0 libstdc++-13-dev libsz2 libtirpc-dev libtsan2 libubsan1 823s linux-libc-dev python3-all python3-dateutil python3-decorator 823s python3-deepdiff python3-dipy python3-dipy-lib python3-h5py 823s python3-h5py-serial python3-jsonpickle python3-nibabel python3-numpy 823s python3-ordered-set python3-packaging python3-pandas python3-pandas-lib 823s python3-scipy python3-setuptools-scm python3-tqdm python3-trx-python 823s rpcsvc-proto 823s 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded. 823s Need to get 122 MB of archives. 823s After this operation, 519 MB of additional disk space will be used. 823s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 823s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 823s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 823s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 823s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 823s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 823s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 823s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 823s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 823s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 823s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 823s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 823s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 823s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 823s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 823s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 823s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 823s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 823s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 823s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 823s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 823s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 823s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 824s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 824s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 824s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 824s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 824s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 824s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 824s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 824s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 824s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 824s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 824s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 824s Get:35 http://ftpmaster.internal/ubuntu noble/universe amd64 libaec0 amd64 1.1.2-1 [22.6 kB] 824s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 824s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 824s Get:38 http://ftpmaster.internal/ubuntu noble/universe amd64 libsz2 amd64 1.1.2-1 [5416 B] 824s Get:39 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-103-1 amd64 1.10.10+repack-3ubuntu1 [1327 kB] 824s Get:40 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-hl-100 amd64 1.10.10+repack-3ubuntu1 [56.2 kB] 824s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 824s Get:42 http://ftpmaster.internal/ubuntu noble/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [30.4 kB] 824s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 824s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 python3-all amd64 3.12.1-0ubuntu2 [906 B] 824s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 python3-dateutil all 2.8.2-3 [79.2 kB] 824s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 824s Get:47 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-jsonpickle all 3.0.3+dfsg-1 [35.5 kB] 824s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 python3-numpy amd64 1:1.24.2-2 [7141 kB] 824s Get:49 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-ordered-set all 4.1.0-1 [9778 B] 824s Get:50 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-deepdiff all 6.7.1-1 [62.8 kB] 824s Get:51 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-h5py-serial amd64 3.10.0-1ubuntu1 [1510 kB] 824s Get:52 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-h5py all 3.10.0-1ubuntu1 [7970 B] 824s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 python3-packaging all 23.2-1 [40.6 kB] 824s Get:54 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-scipy amd64 1.11.4-6 [19.4 MB] 824s Get:55 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-nibabel all 5.2.1-1 [2701 kB] 824s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-tqdm all 4.64.1-2 [95.2 kB] 824s Get:57 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-setuptools-scm all 8.0.4-2 [35.8 kB] 824s Get:58 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-trx-python all 0.2.9-1 [47.8 kB] 824s Get:59 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pandas-lib amd64 2.1.4+dfsg-4ubuntu2 [8348 kB] 824s Get:60 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 824s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-dipy-lib amd64 1.8.0-2ubuntu1 [4149 kB] 824s Get:62 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-dipy all 1.8.0-2ubuntu1 [3506 kB] 825s Fetched 122 MB in 1s (102 MB/s) 825s Selecting previously unselected package libc-dev-bin. 825s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71421 files and directories currently installed.) 825s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_amd64.deb ... 825s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 825s Selecting previously unselected package linux-libc-dev:amd64. 825s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_amd64.deb ... 825s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 825s Selecting previously unselected package libcrypt-dev:amd64. 825s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 825s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 825s Selecting previously unselected package libtirpc-dev:amd64. 825s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 825s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 825s Selecting previously unselected package libnsl-dev:amd64. 825s Preparing to unpack .../04-libnsl-dev_1.3.0-3_amd64.deb ... 825s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 825s Selecting previously unselected package rpcsvc-proto. 825s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 825s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 825s Selecting previously unselected package libc6-dev:amd64. 825s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_amd64.deb ... 825s Unpacking libc6-dev:amd64 (2.39-0ubuntu2) ... 826s Selecting previously unselected package libisl23:amd64. 826s Preparing to unpack .../07-libisl23_0.26-3_amd64.deb ... 826s Unpacking libisl23:amd64 (0.26-3) ... 826s Selecting previously unselected package libmpc3:amd64. 826s Preparing to unpack .../08-libmpc3_1.3.1-1_amd64.deb ... 826s Unpacking libmpc3:amd64 (1.3.1-1) ... 826s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 826s Preparing to unpack .../09-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 826s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 826s Selecting previously unselected package cpp-13. 826s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 826s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 826s Selecting previously unselected package cpp-x86-64-linux-gnu. 826s Preparing to unpack .../11-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 826s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 826s Selecting previously unselected package cpp. 826s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 826s Unpacking cpp (4:13.2.0-7ubuntu1) ... 826s Selecting previously unselected package libcc1-0:amd64. 826s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libgomp1:amd64. 826s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libitm1:amd64. 826s Preparing to unpack .../15-libitm1_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libatomic1:amd64. 826s Preparing to unpack .../16-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libasan8:amd64. 826s Preparing to unpack .../17-libasan8_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package liblsan0:amd64. 826s Preparing to unpack .../18-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libtsan2:amd64. 826s Preparing to unpack .../19-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libubsan1:amd64. 826s Preparing to unpack .../20-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libhwasan0:amd64. 826s Preparing to unpack .../21-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libquadmath0:amd64. 826s Preparing to unpack .../22-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 826s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 826s Selecting previously unselected package libgcc-13-dev:amd64. 826s Preparing to unpack .../23-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 826s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 826s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 826s Preparing to unpack .../24-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 826s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 827s Selecting previously unselected package gcc-13. 827s Preparing to unpack .../25-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 827s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 827s Selecting previously unselected package gcc-x86-64-linux-gnu. 827s Preparing to unpack .../26-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 827s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 827s Selecting previously unselected package gcc. 827s Preparing to unpack .../27-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 827s Unpacking gcc (4:13.2.0-7ubuntu1) ... 827s Selecting previously unselected package libstdc++-13-dev:amd64. 827s Preparing to unpack .../28-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 827s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 827s Selecting previously unselected package g++-13-x86-64-linux-gnu. 827s Preparing to unpack .../29-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 827s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 827s Selecting previously unselected package g++-13. 827s Preparing to unpack .../30-g++-13_13.2.0-17ubuntu2_amd64.deb ... 827s Unpacking g++-13 (13.2.0-17ubuntu2) ... 827s Selecting previously unselected package g++-x86-64-linux-gnu. 827s Preparing to unpack .../31-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 827s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 827s Selecting previously unselected package g++. 827s Preparing to unpack .../32-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 827s Unpacking g++ (4:13.2.0-7ubuntu1) ... 827s Selecting previously unselected package build-essential. 827s Preparing to unpack .../33-build-essential_12.10ubuntu1_amd64.deb ... 827s Unpacking build-essential (12.10ubuntu1) ... 827s Selecting previously unselected package libaec0:amd64. 827s Preparing to unpack .../34-libaec0_1.1.2-1_amd64.deb ... 827s Unpacking libaec0:amd64 (1.1.2-1) ... 827s Selecting previously unselected package libblas3:amd64. 827s Preparing to unpack .../35-libblas3_3.12.0-3_amd64.deb ... 827s Unpacking libblas3:amd64 (3.12.0-3) ... 827s Selecting previously unselected package libgfortran5:amd64. 827s Preparing to unpack .../36-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 827s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 827s Selecting previously unselected package libsz2:amd64. 827s Preparing to unpack .../37-libsz2_1.1.2-1_amd64.deb ... 827s Unpacking libsz2:amd64 (1.1.2-1) ... 827s Selecting previously unselected package libhdf5-103-1:amd64. 827s Preparing to unpack .../38-libhdf5-103-1_1.10.10+repack-3ubuntu1_amd64.deb ... 827s Unpacking libhdf5-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 828s Selecting previously unselected package libhdf5-hl-100:amd64. 828s Preparing to unpack .../39-libhdf5-hl-100_1.10.10+repack-3ubuntu1_amd64.deb ... 828s Unpacking libhdf5-hl-100:amd64 (1.10.10+repack-3ubuntu1) ... 828s Selecting previously unselected package liblapack3:amd64. 828s Preparing to unpack .../40-liblapack3_3.12.0-3_amd64.deb ... 828s Unpacking liblapack3:amd64 (3.12.0-3) ... 828s Selecting previously unselected package liblbfgsb0:amd64. 828s Preparing to unpack .../41-liblbfgsb0_3.0+dfsg.4-1_amd64.deb ... 828s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1) ... 828s Selecting previously unselected package liblzf1:amd64. 828s Preparing to unpack .../42-liblzf1_3.6-4_amd64.deb ... 828s Unpacking liblzf1:amd64 (3.6-4) ... 828s Selecting previously unselected package python3-all. 828s Preparing to unpack .../43-python3-all_3.12.1-0ubuntu2_amd64.deb ... 828s Unpacking python3-all (3.12.1-0ubuntu2) ... 828s Selecting previously unselected package python3-dateutil. 828s Preparing to unpack .../44-python3-dateutil_2.8.2-3_all.deb ... 828s Unpacking python3-dateutil (2.8.2-3) ... 828s Selecting previously unselected package python3-decorator. 828s Preparing to unpack .../45-python3-decorator_5.1.1-5_all.deb ... 828s Unpacking python3-decorator (5.1.1-5) ... 828s Selecting previously unselected package python3-jsonpickle. 828s Preparing to unpack .../46-python3-jsonpickle_3.0.3+dfsg-1_all.deb ... 828s Unpacking python3-jsonpickle (3.0.3+dfsg-1) ... 828s Selecting previously unselected package python3-numpy. 828s Preparing to unpack .../47-python3-numpy_1%3a1.24.2-2_amd64.deb ... 828s Unpacking python3-numpy (1:1.24.2-2) ... 828s Selecting previously unselected package python3-ordered-set. 828s Preparing to unpack .../48-python3-ordered-set_4.1.0-1_all.deb ... 828s Unpacking python3-ordered-set (4.1.0-1) ... 828s Selecting previously unselected package python3-deepdiff. 828s Preparing to unpack .../49-python3-deepdiff_6.7.1-1_all.deb ... 828s Unpacking python3-deepdiff (6.7.1-1) ... 828s Selecting previously unselected package python3-h5py-serial. 828s Preparing to unpack .../50-python3-h5py-serial_3.10.0-1ubuntu1_amd64.deb ... 828s Unpacking python3-h5py-serial (3.10.0-1ubuntu1) ... 828s Selecting previously unselected package python3-h5py. 828s Preparing to unpack .../51-python3-h5py_3.10.0-1ubuntu1_all.deb ... 828s Unpacking python3-h5py (3.10.0-1ubuntu1) ... 828s Selecting previously unselected package python3-packaging. 828s Preparing to unpack .../52-python3-packaging_23.2-1_all.deb ... 828s Unpacking python3-packaging (23.2-1) ... 828s Selecting previously unselected package python3-scipy. 828s Preparing to unpack .../53-python3-scipy_1.11.4-6_amd64.deb ... 828s Unpacking python3-scipy (1.11.4-6) ... 829s Selecting previously unselected package python3-nibabel. 829s Preparing to unpack .../54-python3-nibabel_5.2.1-1_all.deb ... 829s Unpacking python3-nibabel (5.2.1-1) ... 829s Selecting previously unselected package python3-tqdm. 829s Preparing to unpack .../55-python3-tqdm_4.64.1-2_all.deb ... 829s Unpacking python3-tqdm (4.64.1-2) ... 829s Selecting previously unselected package python3-setuptools-scm. 829s Preparing to unpack .../56-python3-setuptools-scm_8.0.4-2_all.deb ... 829s Unpacking python3-setuptools-scm (8.0.4-2) ... 829s Selecting previously unselected package python3-trx-python. 829s Preparing to unpack .../57-python3-trx-python_0.2.9-1_all.deb ... 829s Unpacking python3-trx-python (0.2.9-1) ... 829s Selecting previously unselected package python3-pandas-lib:amd64. 829s Preparing to unpack .../58-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_amd64.deb ... 829s Unpacking python3-pandas-lib:amd64 (2.1.4+dfsg-4ubuntu2) ... 829s Selecting previously unselected package python3-pandas. 829s Preparing to unpack .../59-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ... 829s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ... 830s Selecting previously unselected package python3-dipy-lib:amd64. 830s Preparing to unpack .../60-python3-dipy-lib_1.8.0-2ubuntu1_amd64.deb ... 830s Unpacking python3-dipy-lib:amd64 (1.8.0-2ubuntu1) ... 830s Selecting previously unselected package python3-dipy. 830s Preparing to unpack .../61-python3-dipy_1.8.0-2ubuntu1_all.deb ... 830s Unpacking python3-dipy (1.8.0-2ubuntu1) ... 830s Setting up python3-jsonpickle (3.0.3+dfsg-1) ... 830s Setting up python3-tqdm (4.64.1-2) ... 830s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ... 830s Setting up python3-all (3.12.1-0ubuntu2) ... 830s Setting up python3-ordered-set (4.1.0-1) ... 830s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 830s Setting up libaec0:amd64 (1.1.2-1) ... 830s Setting up python3-decorator (5.1.1-5) ... 830s Setting up libblas3:amd64 (3.12.0-3) ... 830s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 830s Setting up python3-packaging (23.2-1) ... 830s Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 830s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 830s Setting up liblzf1:amd64 (3.6-4) ... 830s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ... 830s Setting up libmpc3:amd64 (1.3.1-1) ... 830s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ... 830s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 830s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ... 830s Setting up libnsl-dev:amd64 (1.3.0-3) ... 830s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ... 830s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 830s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ... 830s Setting up python3-dateutil (2.8.2-3) ... 831s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ... 831s Setting up libisl23:amd64 (0.26-3) ... 831s Setting up libc-dev-bin (2.39-0ubuntu2) ... 831s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 831s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 831s Setting up libsz2:amd64 (1.1.2-1) ... 831s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 831s Setting up liblapack3:amd64 (3.12.0-3) ... 831s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 831s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 831s Setting up python3-setuptools-scm (8.0.4-2) ... 831s Setting up python3-numpy (1:1.24.2-2) ... 832s Setting up libhdf5-103-1:amd64 (1.10.10+repack-3ubuntu1) ... 832s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 832s Setting up libc6-dev:amd64 (2.39-0ubuntu2) ... 832s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 832s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... 832s Setting up libhdf5-hl-100:amd64 (1.10.10+repack-3ubuntu1) ... 832s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 832s Setting up python3-deepdiff (6.7.1-1) ... 832s Setting up python3-scipy (1.11.4-6) ... 835s Setting up cpp-13 (13.2.0-17ubuntu2) ... 835s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 835s Setting up python3-pandas-lib:amd64 (2.1.4+dfsg-4ubuntu2) ... 835s Setting up python3-h5py-serial (3.10.0-1ubuntu1) ... 835s Setting up python3-dipy-lib:amd64 (1.8.0-2ubuntu1) ... 835s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 839s Setting up python3-nibabel (5.2.1-1) ... 839s Setting up python3-h5py (3.10.0-1ubuntu1) ... 839s Setting up gcc-13 (13.2.0-17ubuntu2) ... 839s Setting up cpp (4:13.2.0-7ubuntu1) ... 839s Setting up python3-trx-python (0.2.9-1) ... 839s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 839s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 839s Setting up python3-dipy (1.8.0-2ubuntu1) ... 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:19: SyntaxWarning: invalid escape sequence '\m' 840s """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:57: SyntaxWarning: invalid escape sequence '\m' 840s """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:91: SyntaxWarning: invalid escape sequence '\m' 840s """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:137: SyntaxWarning: invalid escape sequence '\m' 840s """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:187: SyntaxWarning: invalid escape sequence '\m' 840s """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:222: SyntaxWarning: invalid escape sequence '\m' 840s """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:280: SyntaxWarning: invalid escape sequence '\m' 840s """Calculate covariance of a diffusion tensor distribution (DTD). 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:323: SyntaxWarning: invalid escape sequence '\e' 840s """Generate signals using the covariance tensor signal representation. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:395: SyntaxWarning: invalid escape sequence '\m' 840s """Calculate the design matrix from the b-tensors. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:761: SyntaxWarning: invalid escape sequence '\l' 840s """Mean diffusivity. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:783: SyntaxWarning: invalid escape sequence '\m' 840s """Variance of microscopic mean diffusivities. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:805: SyntaxWarning: invalid escape sequence '\m' 840s """Shear variance. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:827: SyntaxWarning: invalid escape sequence '\m' 840s """Total isotropic variance. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:863: SyntaxWarning: invalid escape sequence '\l' 840s """Average of microscopic diffusion tensors' outer products with 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:886: SyntaxWarning: invalid escape sequence '\m' 840s """Normalized variance of mean diffusivities. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:909: SyntaxWarning: invalid escape sequence '\m' 840s """Normalized microscopic anisotropy. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:934: SyntaxWarning: invalid escape sequence '\m' 840s """Microscopic fractional anisotropy. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:953: SyntaxWarning: invalid escape sequence '\l' 840s """Normalized macroscopic anisotropy. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:979: SyntaxWarning: invalid escape sequence '\s' 840s """Fractional anisotropy. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:998: SyntaxWarning: invalid escape sequence '\m' 840s """Microscopic orientation coherence. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:1036: SyntaxWarning: invalid escape sequence '\m' 840s """Bulk kurtosis. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:1061: SyntaxWarning: invalid escape sequence '\m' 840s """Shear kurtosis. 840s /usr/lib/python3/dist-packages/dipy/reconst/qti.py:1086: SyntaxWarning: invalid escape sequence '\m' 840s """Microscopic kurtosis. 840s /usr/lib/python3/dist-packages/dipy/workflows/docstring_parser.py:308: SyntaxWarning: invalid escape sequence '\w' 840s if re.compile('^([\w., ]+=)?\s*[\w\.]+\(.*\)$').match(summary_str): 840s /usr/lib/python3/dist-packages/dipy/workflows/docstring_parser.py:352: SyntaxWarning: invalid escape sequence '\*' 840s return [self['Signature'].replace('*', '\*')] + [''] 840s Setting up gcc (4:13.2.0-7ubuntu1) ... 840s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 840s Setting up g++-13 (13.2.0-17ubuntu2) ... 840s Setting up g++ (4:13.2.0-7ubuntu1) ... 840s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 840s Setting up build-essential (12.10ubuntu1) ... 840s Processing triggers for man-db (2.12.0-3) ... 841s Processing triggers for libc-bin (2.39-0ubuntu2) ... 847s Reading package lists... 847s Building dependency tree... 847s Reading state information... 847s Starting pkgProblemResolver with broken count: 0 847s Starting 2 pkgProblemResolver with broken count: 0 847s Done 847s The following NEW packages will be installed: 847s autopkgtest-satdep 847s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 847s Need to get 0 B/696 B of archives. 847s After this operation, 0 B of additional disk space will be used. 847s Get:1 /tmp/autopkgtest.Xi2HWA/3-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 847s Selecting previously unselected package autopkgtest-satdep. 847s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80140 files and directories currently installed.) 847s Preparing to unpack .../3-autopkgtest-satdep.deb ... 847s Unpacking autopkgtest-satdep (0) ... 848s Setting up autopkgtest-satdep (0) ... 848s autopkgtest: WARNING: package python3-dipy:i386 is not installed though it should be 849s (Reading database ... 80140 files and directories currently installed.) 849s Removing autopkgtest-satdep (0) ... 851s autopkgtest [11:51:08]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import dipy; print(dipy)" ; done 851s autopkgtest [11:51:08]: test autodep8-python3: [----------------------- 852s Testing with python3.12: 852s autopkgtest [11:51:08]: test autodep8-python3: -----------------------] 852s 852s autodep8-python3 PASS (superficial) 852s autopkgtest [11:51:09]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 852s autopkgtest [11:51:09]: @@@@@@@@@@@@@@@@@@@@ summary 852s run-unit-test FAIL badpkg 852s blame: dipy 852s badpkg: Can't resolve build dependencies on testbed 852s autodep8-python3 PASS (superficial) 863s Creating nova instance adt-noble-i386-dipy-20240321-113657-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)... 863s Creating nova instance adt-noble-i386-dipy-20240321-113657-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)...