0s autopkgtest [00:19:05]: starting date: 2024-03-18 0s autopkgtest [00:19:05]: git checkout: d9c0295b adt_testbed.py: supress warnings from apt using a shell pipeline 0s autopkgtest [00:19:05]: host juju-7f2275-prod-proposed-migration-environment-4; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.duhrwts8/out --timeout-copy=6000 --setup-commands 'ls /etc/apt/sources.list.d/*.list 2>/dev/null || true; ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-scater --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- lxd -r lxd-armhf-10.44.124.165 lxd-armhf-10.44.124.165:autopkgtest/ubuntu/noble/armhf 43s autopkgtest [00:19:48]: @@@@@@@@@@@@@@@@@@@@ test bed setup 45s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 46s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 46s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [485 kB] 46s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3726 kB] 46s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 46s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [574 kB] 46s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main armhf c-n-f Metadata [2492 B] 46s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted armhf Packages [1372 B] 46s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted armhf c-n-f Metadata [116 B] 46s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [3501 kB] 46s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf c-n-f Metadata [7776 B] 46s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse armhf Packages [33.8 kB] 46s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse armhf c-n-f Metadata [116 B] 57s Fetched 8507 kB in 3s (2558 kB/s) 58s Reading package lists... 72s /etc/apt/sources.list.d/proposed.list 73s tee: /proc/self/fd/2: Permission denied 108s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 108s Hit:2 http://ports.ubuntu.com/ubuntu-ports noble InRelease 108s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 108s Hit:4 http://ports.ubuntu.com/ubuntu-ports noble-updates InRelease 108s Hit:5 http://ftpmaster.internal/ubuntu noble-security InRelease 108s Hit:6 http://ports.ubuntu.com/ubuntu-ports noble-backports InRelease 108s Hit:7 http://ftpmaster.internal/ubuntu noble-proposed InRelease 108s Hit:8 http://ports.ubuntu.com/ubuntu-ports noble-security InRelease 114s Reading package lists... 114s Reading package lists... 115s Building dependency tree... 115s Reading state information... 117s Calculating upgrade... 118s The following NEW packages will be installed: 118s xdg-user-dirs 118s The following packages have been kept back: 118s curl gir1.2-glib-2.0 openssl 118s The following packages will be upgraded: 118s libglib2.0-data libtirpc-common readline-common 118s 3 upgraded, 1 newly installed, 0 to remove and 3 not upgraded. 118s Need to get 128 kB of archives. 118s After this operation, 143 kB of additional disk space will be used. 118s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 118s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libtirpc-common all 1.3.4+ds-1.1 [8018 B] 118s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main armhf readline-common all 8.2-3.1 [56.4 kB] 118s Get:4 http://ftpmaster.internal/ubuntu noble/main armhf xdg-user-dirs armhf 0.18-1 [17.3 kB] 119s Fetched 128 kB in 0s (298 kB/s) 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58620 files and directories currently installed.) 120s Preparing to unpack .../libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 120s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 120s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 120s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 120s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 120s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 120s Selecting previously unselected package xdg-user-dirs. 120s Preparing to unpack .../xdg-user-dirs_0.18-1_armhf.deb ... 120s Unpacking xdg-user-dirs (0.18-1) ... 120s Setting up xdg-user-dirs (0.18-1) ... 120s Setting up libtirpc-common (1.3.4+ds-1.1) ... 120s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 120s Setting up readline-common (8.2-3.1) ... 120s Processing triggers for install-info (7.1-3) ... 120s Processing triggers for man-db (2.12.0-3) ... 122s Reading package lists... 123s Building dependency tree... 123s Reading state information... 125s 0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded. 127s autopkgtest [00:21:12]: rebooting testbed after setup commands that affected boot 156s autopkgtest [00:21:41]: testbed running kernel: Linux 5.4.0-173-generic #191-Ubuntu SMP Fri Feb 2 13:54:37 UTC 2024 160s autopkgtest [00:21:45]: testbed dpkg architecture: armhf 172s autopkgtest [00:21:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-scater 178s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-scater 1.30.1+ds-2 (dsc) [2503 B] 179s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-scater 1.30.1+ds-2 (tar) [238 kB] 179s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-scater 1.30.1+ds-2 (diff) [3584 B] 179s gpgv: Signature made Tue Dec 19 08:23:26 2023 UTC 179s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 179s gpgv: issuer "tille@debian.org" 179s gpgv: Can't check signature: No public key 179s dpkg-source: warning: cannot verify inline signature for ./r-bioc-scater_1.30.1+ds-2.dsc: no acceptable signature found 179s autopkgtest [00:22:04]: testing package r-bioc-scater version 1.30.1+ds-2 179s autopkgtest [00:22:04]: build not needed 182s pkg-r-autopkgtest SKIP Test lists explicitly supported architectures, but the current architecture armhf isn't listed. 182s autopkgtest [00:22:07]: @@@@@@@@@@@@@@@@@@@@ summary 182s pkg-r-autopkgtest SKIP Test lists explicitly supported architectures, but the current architecture armhf isn't listed.