0s autopkgtest [01:23:27]: starting date and time: 2024-04-19 01:23:27+0000 0s autopkgtest [01:23:27]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline 0s autopkgtest [01:23:27]: host juju-7f2275-prod-proposed-migration-environment-4; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1bt1iwql/out --timeout-copy=6000 --setup-commands 'dhclient || true; ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:gsl --apt-upgrade cpl-plugin-xshoo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=gsl/2.7.1+dfsg-6ubuntu2 -- lxd -r lxd-armhf-10.145.243.91 lxd-armhf-10.145.243.91:autopkgtest/ubuntu/noble/armhf 27s autopkgtest [01:23:54]: testbed dpkg architecture: armhf 29s autopkgtest [01:23:56]: testbed apt version: 2.7.14build2 29s autopkgtest [01:23:56]: @@@@@@@@@@@@@@@@@@@@ test bed setup 37s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 37s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [376 kB] 38s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [54.2 kB] 38s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B] 38s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB] 38s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [82.2 kB] 38s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main armhf c-n-f Metadata [2492 B] 38s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted armhf Packages [976 B] 38s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted armhf c-n-f Metadata [116 B] 38s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [459 kB] 38s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf c-n-f Metadata [7776 B] 38s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse armhf c-n-f Metadata [116 B] 40s Fetched 1114 kB in 2s (690 kB/s) 40s Reading package lists... 57s sh: 1: dhclient: not found 58s tee: /proc/self/fd/2: Permission denied 84s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 84s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 84s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 84s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 86s Reading package lists... 86s Reading package lists... 86s Building dependency tree... 86s Reading state information... 87s Calculating upgrade... 87s The following packages will be upgraded: 87s apport apport-core-dump-handler apport-symptoms base-passwd bcache-tools 87s bind9-dnsutils bind9-host bind9-libs bzip2 cloud-init cpio cryptsetup-bin 87s dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common 87s dbus-user-session diffutils dmidecode dracut-install e2fsprogs 87s e2fsprogs-l10n eatmydata ethtool findutils ftp gcc-13-base gcc-14-base 87s gettext-base grep gzip hdparm hostname htop iptables iputils-ping 87s iputils-tracepath kmod libacl1 libargon2-1 libassuan0 libatasmart4 libattr1 87s libbytesize-common libbytesize1 libbz2-1.0 libcap2 libcap2-bin libcom-err2 87s libcrypt1 libcryptsetup12 libdb5.3t64 libdbus-1-3 libdrm-common libdrm2 87s libeatmydata1 libedit2 libestr0 libevdev2 libext2fs2t64 libfastjson4 libffi8 87s libfido2-1 libflashrom1 libfribidi0 libgcc-s1 libgcrypt20 libgmp10 87s libgpg-error-l10n libgpg-error0 libicu74 libidn2-0 libinih1 libip4tc2 87s libip6tc2 libjson-c5 libkeyutils1 libkmod2 liblmdb0 liblz4-1 liblzo2-2 87s libmaxminddb0 libmd0 libmnl0 libmpfr6 libncurses6 libncursesw6 87s libnetfilter-conntrack3 libnfnetlink0 libnftables1 libnftnl11 libnghttp2-14 87s libnl-3-200 libnl-genl-3-200 libnl-route-3-200 libnspr4 libnss3 libnuma1 87s libonig5 libp11-kit0 libpam-cap libpam-modules libpam-modules-bin 87s libpam-runtime libpam0g libpci3 libpcre2-8-0 libpopt0 libpython3-stdlib 87s libpython3.12-minimal libpython3.12-stdlib libsepol2 libsgutils2-1.46-2 87s libsigsegv2 libss2 libstdc++6 libtasn1-6 libtinfo6 libuchardet0 87s libunistring5 libutempter0 libx11-6 libx11-data libxau6 libxdmcp6 libxext6 87s libxkbcommon0 libxmlb2 libxtables12 libxxhash0 libyaml-0-2 libzstd1 login 87s logrotate logsave make man-db mawk nano ncurses-base ncurses-bin 87s ncurses-term netcat-openbsd nftables numactl openssh-client openssh-server 87s openssh-sftp-server passwd patch pci.ids pciutils python-apt-common python3 87s python3-apport python3-apt python3-cffi-backend python3-gdbm python3-minimal 87s python3-netifaces python3-problem-report python3-systemd python3.12 87s python3.12-minimal rsync rsyslog screen sed sg3-utils sg3-utils-udev sudo 87s sysstat sysvinit-utils tar tcpdump time tnftp tzdata ufw usb.ids usbutils 87s xauth xdg-user-dirs xkb-data zstd 89s 186 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 89s Need to get 43.7 MB of archives. 89s After this operation, 585 kB disk space will be freed. 89s Get:1 http://ftpmaster.internal/ubuntu noble/main armhf diffutils armhf 1:3.10-1build1 [167 kB] 89s Get:2 http://ftpmaster.internal/ubuntu noble/main armhf findutils armhf 4.9.0-5build1 [293 kB] 89s Get:3 http://ftpmaster.internal/ubuntu noble/main armhf grep armhf 3.11-4build1 [157 kB] 89s Get:4 http://ftpmaster.internal/ubuntu noble/main armhf gzip armhf 1.12-1ubuntu3 [95.8 kB] 89s Get:5 http://ftpmaster.internal/ubuntu noble/main armhf hostname armhf 3.23+nmu2ubuntu2 [10.4 kB] 89s Get:6 http://ftpmaster.internal/ubuntu noble/main armhf login armhf 1:4.13+dfsg1-4ubuntu3 [200 kB] 90s Get:7 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-bin armhf 6.4+20240113-1ubuntu2 [178 kB] 90s Get:8 http://ftpmaster.internal/ubuntu noble/main armhf sed armhf 4.9-2build1 [190 kB] 90s Get:9 http://ftpmaster.internal/ubuntu noble/main armhf tar armhf 1.35+dfsg-3build1 [236 kB] 90s Get:10 http://ftpmaster.internal/ubuntu noble/main armhf base-passwd armhf 3.6.3build1 [50.9 kB] 90s Get:11 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-base all 6.4+20240113-1ubuntu2 [25.5 kB] 90s Get:12 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-term all 6.4+20240113-1ubuntu2 [275 kB] 90s Get:13 http://ftpmaster.internal/ubuntu noble/main armhf sysvinit-utils armhf 3.08-6ubuntu3 [33.8 kB] 90s Get:14 http://ftpmaster.internal/ubuntu noble/main armhf libcrypt1 armhf 1:4.4.36-4build1 [92.6 kB] 90s Get:15 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.3-5ubuntu5 [62.1 kB] 90s Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.3-5ubuntu5 [47.0 kB] 90s Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.3-5ubuntu5 [260 kB] 90s Get:18 http://ftpmaster.internal/ubuntu noble/main armhf e2fsprogs-l10n all 1.47.0-2.4~exp1ubuntu4 [5998 B] 90s Get:19 http://ftpmaster.internal/ubuntu noble/main armhf logsave armhf 1.47.0-2.4~exp1ubuntu4 [22.0 kB] 90s Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libext2fs2t64 armhf 1.47.0-2.4~exp1ubuntu4 [202 kB] 90s Get:21 http://ftpmaster.internal/ubuntu noble/main armhf e2fsprogs armhf 1.47.0-2.4~exp1ubuntu4 [571 kB] 91s Get:22 http://ftpmaster.internal/ubuntu noble/main armhf tzdata all 2024a-2ubuntu1 [273 kB] 91s Get:23 http://ftpmaster.internal/ubuntu noble/main armhf python3.12 armhf 3.12.3-1 [651 kB] 91s Get:24 http://ftpmaster.internal/ubuntu noble/main armhf bzip2 armhf 1.0.8-5.1 [33.5 kB] 91s Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libbz2-1.0 armhf 1.0.8-5.1 [31.1 kB] 91s Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-7 [662 kB] 91s Get:27 http://ftpmaster.internal/ubuntu noble/main armhf gcc-14-base armhf 14-20240412-0ubuntu1 [47.6 kB] 91s Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 14-20240412-0ubuntu1 [41.5 kB] 91s Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 14-20240412-0ubuntu1 [714 kB] 91s Get:30 http://ftpmaster.internal/ubuntu noble/main armhf libffi8 armhf 3.4.6-1build1 [21.2 kB] 91s Get:31 http://ftpmaster.internal/ubuntu noble/main armhf libncurses6 armhf 6.4+20240113-1ubuntu2 [88.1 kB] 91s Get:32 http://ftpmaster.internal/ubuntu noble/main armhf libncursesw6 armhf 6.4+20240113-1ubuntu2 [119 kB] 91s Get:33 http://ftpmaster.internal/ubuntu noble/main armhf libtinfo6 armhf 6.4+20240113-1ubuntu2 [90.8 kB] 91s Get:34 http://ftpmaster.internal/ubuntu noble/main armhf libpython3.12-stdlib armhf 3.12.3-1 [1925 kB] 92s Get:35 http://ftpmaster.internal/ubuntu noble/main armhf python3.12-minimal armhf 3.12.3-1 [2023 kB] 92s Get:36 http://ftpmaster.internal/ubuntu noble/main armhf libpython3.12-minimal armhf 3.12.3-1 [817 kB] 92s Get:37 http://ftpmaster.internal/ubuntu noble/main armhf python3-minimal armhf 3.12.3-0ubuntu1 [27.2 kB] 92s Get:38 http://ftpmaster.internal/ubuntu noble/main armhf python3 armhf 3.12.3-0ubuntu1 [24.1 kB] 92s Get:39 http://ftpmaster.internal/ubuntu noble/main armhf libpython3-stdlib armhf 3.12.3-0ubuntu1 [9896 B] 92s Get:40 http://ftpmaster.internal/ubuntu noble/main armhf libacl1 armhf 2.3.2-1build1 [15.1 kB] 92s Get:41 http://ftpmaster.internal/ubuntu noble/main armhf liblz4-1 armhf 1.9.4-1build1 [58.0 kB] 92s Get:42 http://ftpmaster.internal/ubuntu noble/main armhf libpopt0 armhf 1.19+dfsg-1build1 [25.0 kB] 92s Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libxxhash0 armhf 0.8.2-2build1 [31.5 kB] 92s Get:44 http://ftpmaster.internal/ubuntu noble/main armhf libzstd1 armhf 1.5.5+dfsg2-2build1 [265 kB] 92s Get:45 http://ftpmaster.internal/ubuntu noble/main armhf rsync armhf 3.2.7-1ubuntu1 [413 kB] 92s Get:46 http://ftpmaster.internal/ubuntu noble/main armhf python-apt-common all 2.7.7ubuntu1 [20.1 kB] 92s Get:47 http://ftpmaster.internal/ubuntu noble/main armhf python3-apt armhf 2.7.7ubuntu1 [162 kB] 92s Get:48 http://ftpmaster.internal/ubuntu noble/main armhf python3-problem-report all 2.28.1-0ubuntu1 [23.8 kB] 92s Get:49 http://ftpmaster.internal/ubuntu noble/main armhf python3-apport all 2.28.1-0ubuntu1 [92.1 kB] 92s Get:50 http://ftpmaster.internal/ubuntu noble/main armhf apport-core-dump-handler all 2.28.1-0ubuntu1 [16.8 kB] 92s Get:51 http://ftpmaster.internal/ubuntu noble/main armhf apport all 2.28.1-0ubuntu1 [83.5 kB] 92s Get:52 http://ftpmaster.internal/ubuntu noble/main armhf passwd armhf 1:4.13+dfsg1-4ubuntu3 [817 kB] 92s Get:53 http://ftpmaster.internal/ubuntu noble/main armhf libedit2 armhf 3.1-20230828-1build1 [78.7 kB] 92s Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libfido2-1 armhf 1.14.0-1build3 [75.8 kB] 92s Get:55 http://ftpmaster.internal/ubuntu noble/main armhf openssh-sftp-server armhf 1:9.6p1-3ubuntu13 [35.5 kB] 92s Get:56 http://ftpmaster.internal/ubuntu noble/main armhf openssh-server armhf 1:9.6p1-3ubuntu13 [504 kB] 92s Get:57 http://ftpmaster.internal/ubuntu noble/main armhf openssh-client armhf 1:9.6p1-3ubuntu13 [890 kB] 93s Get:58 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.3-5ubuntu5 [40.8 kB] 93s Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libcom-err2 armhf 1.47.0-2.4~exp1ubuntu4 [21.9 kB] 93s Get:60 http://ftpmaster.internal/ubuntu noble/main armhf libattr1 armhf 1:2.5.2-1build1 [10.2 kB] 93s Get:61 http://ftpmaster.internal/ubuntu noble/main armhf libcap2 armhf 1:2.66-5ubuntu2 [25.8 kB] 93s Get:62 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error-l10n all 1.47-3build2 [8064 B] 93s Get:63 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error0 armhf 1.47-3build2 [61.6 kB] 93s Get:64 http://ftpmaster.internal/ubuntu noble/main armhf libgcrypt20 armhf 1.10.3-2build1 [454 kB] 93s Get:65 http://ftpmaster.internal/ubuntu noble/main armhf libgmp10 armhf 2:6.3.0+dfsg-2ubuntu6 [207 kB] 93s Get:66 http://ftpmaster.internal/ubuntu noble/main armhf libmd0 armhf 1.1.0-2build1 [23.0 kB] 93s Get:67 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-8-0 armhf 10.42-4ubuntu2 [198 kB] 93s Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libsepol2 armhf 3.5-2build1 [263 kB] 93s Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libunistring5 armhf 1.1-2build1 [513 kB] 93s Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libidn2-0 armhf 2.3.7-2build1 [96.2 kB] 93s Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libp11-kit0 armhf 0.25.3-4ubuntu2 [258 kB] 93s Get:72 http://ftpmaster.internal/ubuntu noble/main armhf libtasn1-6 armhf 4.19.0-3build1 [37.2 kB] 93s Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libassuan0 armhf 2.5.6-1build1 [31.3 kB] 93s Get:74 http://ftpmaster.internal/ubuntu noble/main armhf libss2 armhf 1.47.0-2.4~exp1ubuntu4 [14.7 kB] 93s Get:75 http://ftpmaster.internal/ubuntu noble/main armhf mawk armhf 1.3.4.20240123-1build1 [115 kB] 93s Get:76 http://ftpmaster.internal/ubuntu noble/main armhf dbus-system-bus-common all 1.14.10-4ubuntu4 [81.6 kB] 93s Get:77 http://ftpmaster.internal/ubuntu noble/main armhf dbus-session-bus-common all 1.14.10-4ubuntu4 [80.4 kB] 93s Get:78 http://ftpmaster.internal/ubuntu noble/main armhf dbus-user-session armhf 1.14.10-4ubuntu4 [9960 B] 93s Get:79 http://ftpmaster.internal/ubuntu noble/main armhf dbus-daemon armhf 1.14.10-4ubuntu4 [109 kB] 93s Get:80 http://ftpmaster.internal/ubuntu noble/main armhf dbus-bin armhf 1.14.10-4ubuntu4 [37.1 kB] 93s Get:81 http://ftpmaster.internal/ubuntu noble/main armhf dbus armhf 1.14.10-4ubuntu4 [28.1 kB] 93s Get:82 http://ftpmaster.internal/ubuntu noble/main armhf libdbus-1-3 armhf 1.14.10-4ubuntu4 [190 kB] 93s Get:83 http://ftpmaster.internal/ubuntu noble/main armhf libpam-cap armhf 1:2.66-5ubuntu2 [11.6 kB] 93s Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libcap2-bin armhf 1:2.66-5ubuntu2 [32.3 kB] 93s Get:85 http://ftpmaster.internal/ubuntu noble/main armhf iputils-ping armhf 3:20240117-1build1 [43.1 kB] 93s Get:86 http://ftpmaster.internal/ubuntu noble/main armhf kmod armhf 31+20240202-2ubuntu6 [91.8 kB] 93s Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libkmod2 armhf 31+20240202-2ubuntu6 [45.0 kB] 93s Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libargon2-1 armhf 0~20190702+dfsg-4build1 [22.6 kB] 93s Get:89 http://ftpmaster.internal/ubuntu noble/main armhf libjson-c5 armhf 0.17-1build1 [31.3 kB] 93s Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libcryptsetup12 armhf 2:2.7.0-1ubuntu4 [238 kB] 93s Get:91 http://ftpmaster.internal/ubuntu noble/main armhf libestr0 armhf 0.1.11-1build1 [6770 B] 93s Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libfastjson4 armhf 1.2304.0-1build1 [20.1 kB] 93s Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libfribidi0 armhf 1.0.13-3build1 [23.9 kB] 93s Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libicu74 armhf 74.2-1ubuntu3 [10.5 MB] 94s Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libkeyutils1 armhf 1.6.3-3build1 [8236 B] 94s Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libmnl0 armhf 1.0.5-2build1 [10.5 kB] 94s Get:97 http://ftpmaster.internal/ubuntu noble/main armhf iptables armhf 1.8.10-3ubuntu2 [338 kB] 94s Get:98 http://ftpmaster.internal/ubuntu noble/main armhf libip4tc2 armhf 1.8.10-3ubuntu2 [21.3 kB] 94s Get:99 http://ftpmaster.internal/ubuntu noble/main armhf libip6tc2 armhf 1.8.10-3ubuntu2 [21.7 kB] 94s Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libnfnetlink0 armhf 1.0.2-2build1 [12.9 kB] 97s Get:101 http://ftpmaster.internal/ubuntu noble/main armhf libnetfilter-conntrack3 armhf 1.0.9-6build1 [37.5 kB] 98s Get:102 http://ftpmaster.internal/ubuntu noble/main armhf libnftnl11 armhf 1.2.6-2build1 [52.5 kB] 98s Get:103 http://ftpmaster.internal/ubuntu noble/main armhf libxtables12 armhf 1.8.10-3ubuntu2 [32.4 kB] 98s Get:104 http://ftpmaster.internal/ubuntu noble/main armhf libyaml-0-2 armhf 0.2.5-1build1 [45.2 kB] 98s Get:105 http://ftpmaster.internal/ubuntu noble/main armhf logrotate armhf 3.21.0-2build1 [50.3 kB] 98s Get:106 http://ftpmaster.internal/ubuntu noble/main armhf netcat-openbsd armhf 1.226-1ubuntu2 [42.8 kB] 98s Get:107 http://ftpmaster.internal/ubuntu noble/main armhf python3-cffi-backend armhf 1.16.0-2build1 [68.0 kB] 98s Get:108 http://ftpmaster.internal/ubuntu noble/main armhf python3-netifaces armhf 0.11.0-2build3 [17.2 kB] 98s Get:109 http://ftpmaster.internal/ubuntu noble/main armhf rsyslog armhf 8.2312.0-3ubuntu9 [460 kB] 98s Get:110 http://ftpmaster.internal/ubuntu noble/main armhf sudo armhf 1.9.15p5-3ubuntu5 [936 kB] 99s Get:111 http://ftpmaster.internal/ubuntu noble/main armhf xdg-user-dirs armhf 0.18-1build1 [17.3 kB] 99s Get:112 http://ftpmaster.internal/ubuntu noble/main armhf xkb-data all 2.41-2ubuntu1 [395 kB] 99s Get:113 http://ftpmaster.internal/ubuntu noble/main armhf liblmdb0 armhf 0.9.31-1build1 [39.9 kB] 99s Get:114 http://ftpmaster.internal/ubuntu noble/main armhf libmaxminddb0 armhf 1.9.1-1build1 [23.2 kB] 99s Get:115 http://ftpmaster.internal/ubuntu noble/main armhf libnghttp2-14 armhf 1.59.0-1build4 [68.2 kB] 99s Get:116 http://ftpmaster.internal/ubuntu noble/main armhf bind9-dnsutils armhf 1:9.18.24-0ubuntu5 [149 kB] 99s Get:117 http://ftpmaster.internal/ubuntu noble/main armhf bind9-host armhf 1:9.18.24-0ubuntu5 [47.4 kB] 99s Get:118 http://ftpmaster.internal/ubuntu noble/main armhf bind9-libs armhf 1:9.18.24-0ubuntu5 [1148 kB] 99s Get:119 http://ftpmaster.internal/ubuntu noble/main armhf cpio armhf 2.15+dfsg-1ubuntu2 [81.8 kB] 99s Get:120 http://ftpmaster.internal/ubuntu noble/main armhf dmidecode armhf 3.5-3build1 [58.6 kB] 99s Get:121 http://ftpmaster.internal/ubuntu noble/main armhf tnftp armhf 20230507-2build3 [98.7 kB] 99s Get:122 http://ftpmaster.internal/ubuntu noble/main armhf ftp all 20230507-2build3 [4728 B] 99s Get:123 http://ftpmaster.internal/ubuntu noble/main armhf gettext-base armhf 0.21-14ubuntu2 [38.1 kB] 99s Get:124 http://ftpmaster.internal/ubuntu noble/main armhf hdparm armhf 9.65+ds-1build1 [96.7 kB] 99s Get:125 http://ftpmaster.internal/ubuntu noble/main armhf iputils-tracepath armhf 3:20240117-1build1 [12.8 kB] 99s Get:126 http://ftpmaster.internal/ubuntu noble/main armhf libdrm-common all 2.4.120-2build1 [8096 B] 99s Get:127 http://ftpmaster.internal/ubuntu noble/main armhf libdrm2 armhf 2.4.120-2build1 [36.6 kB] 99s Get:128 http://ftpmaster.internal/ubuntu noble/main armhf nftables armhf 1.0.9-1build1 [69.5 kB] 99s Get:129 http://ftpmaster.internal/ubuntu noble/main armhf libnftables1 armhf 1.0.9-1build1 [309 kB] 99s Get:130 http://ftpmaster.internal/ubuntu noble/main armhf libnuma1 armhf 2.0.18-1build1 [19.8 kB] 99s Get:131 http://ftpmaster.internal/ubuntu noble/main armhf pci.ids all 0.0~2024.03.31-1 [275 kB] 99s Get:132 http://ftpmaster.internal/ubuntu noble/main armhf pciutils armhf 1:3.10.0-2build1 [64.4 kB] 99s Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libpci3 armhf 1:3.10.0-2build1 [29.5 kB] 99s Get:134 http://ftpmaster.internal/ubuntu noble/main armhf libuchardet0 armhf 0.0.8-1build1 [73.9 kB] 99s Get:135 http://ftpmaster.internal/ubuntu noble/main armhf libx11-data all 2:1.8.7-1build1 [115 kB] 99s Get:136 http://ftpmaster.internal/ubuntu noble/main armhf libx11-6 armhf 2:1.8.7-1build1 [583 kB] 99s Get:137 http://ftpmaster.internal/ubuntu noble/main armhf libxau6 armhf 1:1.0.9-1build6 [6312 B] 99s Get:138 http://ftpmaster.internal/ubuntu noble/main armhf libxdmcp6 armhf 1:1.1.3-0ubuntu6 [8738 B] 99s Get:139 http://ftpmaster.internal/ubuntu noble/main armhf libxext6 armhf 2:1.3.4-1build2 [25.3 kB] 99s Get:140 http://ftpmaster.internal/ubuntu noble/main armhf man-db armhf 2.12.0-4build2 [1202 kB] 100s Get:141 http://ftpmaster.internal/ubuntu noble/main armhf nano armhf 7.2-2build1 [269 kB] 100s Get:142 http://ftpmaster.internal/ubuntu noble/main armhf python3-gdbm armhf 3.12.3-0ubuntu1 [15.2 kB] 100s Get:143 http://ftpmaster.internal/ubuntu noble/main armhf tcpdump armhf 4.99.4-3ubuntu4 [425 kB] 100s Get:144 http://ftpmaster.internal/ubuntu noble/main armhf time armhf 1.9-0.2build1 [45.8 kB] 100s Get:145 http://ftpmaster.internal/ubuntu noble/main armhf ufw all 0.36.2-6 [169 kB] 100s Get:146 http://ftpmaster.internal/ubuntu noble/main armhf usb.ids all 2024.03.18-1 [223 kB] 100s Get:147 http://ftpmaster.internal/ubuntu noble/main armhf usbutils armhf 1:017-3build1 [75.6 kB] 100s Get:148 http://ftpmaster.internal/ubuntu noble/main armhf xauth armhf 1:1.1.2-1build1 [22.7 kB] 100s Get:149 http://ftpmaster.internal/ubuntu noble/main armhf apport-symptoms all 0.25 [13.1 kB] 100s Get:150 http://ftpmaster.internal/ubuntu noble/main armhf bcache-tools armhf 1.0.8-5build1 [20.2 kB] 100s Get:151 http://ftpmaster.internal/ubuntu noble/main armhf cryptsetup-bin armhf 2:2.7.0-1ubuntu4 [214 kB] 100s Get:152 http://ftpmaster.internal/ubuntu noble/main armhf dracut-install armhf 060+5-1ubuntu3 [34.1 kB] 100s Get:153 http://ftpmaster.internal/ubuntu noble/main armhf libeatmydata1 armhf 131-1ubuntu1 [7188 B] 100s Get:154 http://ftpmaster.internal/ubuntu noble/main armhf eatmydata all 131-1ubuntu1 [5584 B] 100s Get:155 http://ftpmaster.internal/ubuntu noble/main armhf ethtool armhf 1:6.7-1build1 [218 kB] 100s Get:156 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-base armhf 13.2.0-23ubuntu4 [48.9 kB] 100s Get:157 http://ftpmaster.internal/ubuntu noble/main armhf libnl-genl-3-200 armhf 3.7.0-0.3build1 [10.3 kB] 100s Get:158 http://ftpmaster.internal/ubuntu noble/main armhf libnl-route-3-200 armhf 3.7.0-0.3build1 [162 kB] 100s Get:159 http://ftpmaster.internal/ubuntu noble/main armhf libnl-3-200 armhf 3.7.0-0.3build1 [49.0 kB] 100s Get:160 http://ftpmaster.internal/ubuntu noble/main armhf htop armhf 3.3.0-4build1 [139 kB] 100s Get:161 http://ftpmaster.internal/ubuntu noble/main armhf libatasmart4 armhf 0.19-5build3 [24.0 kB] 100s Get:162 http://ftpmaster.internal/ubuntu noble/main armhf libmpfr6 armhf 4.2.1-1build1 [229 kB] 100s Get:163 http://ftpmaster.internal/ubuntu noble/main armhf libbytesize1 armhf 2.10-1ubuntu2 [11.7 kB] 100s Get:164 http://ftpmaster.internal/ubuntu noble/main armhf libbytesize-common all 2.10-1ubuntu2 [3396 B] 100s Get:165 http://ftpmaster.internal/ubuntu noble/main armhf libflashrom1 armhf 1.3.0-2.1ubuntu2 [138 kB] 100s Get:166 http://ftpmaster.internal/ubuntu noble/main armhf libinih1 armhf 55-1ubuntu2 [6506 B] 100s Get:167 http://ftpmaster.internal/ubuntu noble/main armhf liblzo2-2 armhf 2.10-2build4 [46.1 kB] 100s Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libnspr4 armhf 2:4.35-1.1build1 [93.0 kB] 100s Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libnss3 armhf 2:3.98-1build1 [1288 kB] 100s Get:170 http://ftpmaster.internal/ubuntu noble/main armhf libonig5 armhf 6.9.9-1build1 [148 kB] 100s Get:171 http://ftpmaster.internal/ubuntu noble/main armhf libsgutils2-1.46-2 armhf 1.46-3ubuntu4 [82.7 kB] 100s Get:172 http://ftpmaster.internal/ubuntu noble/main armhf libsigsegv2 armhf 2.14-1ubuntu2 [14.2 kB] 100s Get:173 http://ftpmaster.internal/ubuntu noble/main armhf libutempter0 armhf 1.2.1-3build1 [8862 B] 100s Get:174 http://ftpmaster.internal/ubuntu noble/main armhf libxkbcommon0 armhf 1.6.0-1build1 [108 kB] 100s Get:175 http://ftpmaster.internal/ubuntu noble/main armhf libxmlb2 armhf 0.3.18-1 [56.9 kB] 100s Get:176 http://ftpmaster.internal/ubuntu noble/main armhf make armhf 4.3-4.1build2 [162 kB] 100s Get:177 http://ftpmaster.internal/ubuntu noble/main armhf numactl armhf 2.0.18-1build1 [38.2 kB] 100s Get:178 http://ftpmaster.internal/ubuntu noble/main armhf patch armhf 2.7.6-7build3 [110 kB] 100s Get:179 http://ftpmaster.internal/ubuntu noble/main armhf python3-systemd armhf 235-1build4 [39.7 kB] 100s Get:180 http://ftpmaster.internal/ubuntu noble/main armhf screen armhf 4.9.1-1build1 [638 kB] 100s Get:181 http://ftpmaster.internal/ubuntu noble/main armhf sg3-utils armhf 1.46-3ubuntu4 [816 kB] 101s Get:182 http://ftpmaster.internal/ubuntu noble/main armhf sg3-utils-udev all 1.46-3ubuntu4 [5922 B] 101s Get:183 http://ftpmaster.internal/ubuntu noble/main armhf sysstat armhf 12.6.1-2 [479 kB] 101s Get:184 http://ftpmaster.internal/ubuntu noble/main armhf zstd armhf 1.5.5+dfsg2-2build1 [683 kB] 101s Get:185 http://ftpmaster.internal/ubuntu noble/main armhf cloud-init all 24.1.3-0ubuntu3 [598 kB] 101s Get:186 http://ftpmaster.internal/ubuntu noble/main armhf libevdev2 armhf 1.13.1+dfsg-1build1 [29.8 kB] 103s Preconfiguring packages ... 103s Fetched 43.7 MB in 13s (3261 kB/s) 104s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 105s Preparing to unpack .../ncurses-base_6.4+20240113-1ubuntu2_all.deb ... 105s Unpacking ncurses-base (6.4+20240113-1ubuntu2) over (6.4+20240113-1ubuntu1) ... 105s Setting up ncurses-base (6.4+20240113-1ubuntu2) ... 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 105s Preparing to unpack .../ncurses-term_6.4+20240113-1ubuntu2_all.deb ... 105s Unpacking ncurses-term (6.4+20240113-1ubuntu2) over (6.4+20240113-1ubuntu1) ... 106s Preparing to unpack .../sysvinit-utils_3.08-6ubuntu3_armhf.deb ... 106s Unpacking sysvinit-utils (3.08-6ubuntu3) over (3.08-6ubuntu2) ... 106s Setting up sysvinit-utils (3.08-6ubuntu3) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 106s Preparing to unpack .../libcrypt1_1%3a4.4.36-4build1_armhf.deb ... 106s Unpacking libcrypt1:armhf (1:4.4.36-4build1) over (1:4.4.36-4) ... 106s Setting up libcrypt1:armhf (1:4.4.36-4build1) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 106s Preparing to unpack .../libpam0g_1.5.3-5ubuntu5_armhf.deb ... 106s Unpacking libpam0g:armhf (1.5.3-5ubuntu5) over (1.5.3-5ubuntu4) ... 106s Setting up libpam0g:armhf (1.5.3-5ubuntu5) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 106s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu5_armhf.deb ... 106s Unpacking libpam-modules-bin (1.5.3-5ubuntu5) over (1.5.3-5ubuntu4) ... 106s Setting up libpam-modules-bin (1.5.3-5ubuntu5) ... 107s pam_namespace.service is a disabled or a static unit not running, not starting it. 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 107s Preparing to unpack .../libpam-modules_1.5.3-5ubuntu5_armhf.deb ... 108s Unpacking libpam-modules:armhf (1.5.3-5ubuntu5) over (1.5.3-5ubuntu4) ... 108s Setting up libpam-modules:armhf (1.5.3-5ubuntu5) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 108s Preparing to unpack .../e2fsprogs-l10n_1.47.0-2.4~exp1ubuntu4_all.deb ... 108s Unpacking e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2.4~exp1ubuntu3) ... 108s Preparing to unpack .../logsave_1.47.0-2.4~exp1ubuntu4_armhf.deb ... 108s Unpacking logsave (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2.4~exp1ubuntu3) ... 108s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu4_armhf.deb ... 108s Leaving 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2 to /lib/arm-linux-gnueabihf/libe2p.so.2.usr-is-merged by libext2fs2t64' 108s Leaving 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2.3 to /lib/arm-linux-gnueabihf/libe2p.so.2.3.usr-is-merged by libext2fs2t64' 108s Leaving 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2 to /lib/arm-linux-gnueabihf/libext2fs.so.2.usr-is-merged by libext2fs2t64' 108s Leaving 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2.4 to /lib/arm-linux-gnueabihf/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' 108s Unpacking libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2.4~exp1ubuntu3) ... 108s Setting up libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58471 files and directories currently installed.) 108s Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu4_armhf.deb ... 108s Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2.4~exp1ubuntu3) ... 108s Preparing to unpack .../tzdata_2024a-2ubuntu1_all.deb ... 108s Unpacking tzdata (2024a-2ubuntu1) over (2024a-1ubuntu1) ... 109s Preparing to unpack .../python3.12_3.12.3-1_armhf.deb ... 109s Unpacking python3.12 (3.12.3-1) over (3.12.2-5ubuntu3) ... 109s Preparing to unpack .../bzip2_1.0.8-5.1_armhf.deb ... 109s Unpacking bzip2 (1.0.8-5.1) over (1.0.8-5ubuntu1) ... 109s Preparing to unpack .../libbz2-1.0_1.0.8-5.1_armhf.deb ... 109s Unpacking libbz2-1.0:armhf (1.0.8-5.1) over (1.0.8-5ubuntu1) ... 110s Setting up libbz2-1.0:armhf (1.0.8-5.1) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58470 files and directories currently installed.) 110s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-7_armhf.deb ... 110s Unpacking libdb5.3t64:armhf (5.3.28+dfsg2-7) over (5.3.28+dfsg2-6build1) ... 110s Preparing to unpack .../gcc-14-base_14-20240412-0ubuntu1_armhf.deb ... 110s Unpacking gcc-14-base:armhf (14-20240412-0ubuntu1) over (14-20240330-1ubuntu2) ... 110s Setting up gcc-14-base:armhf (14-20240412-0ubuntu1) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58470 files and directories currently installed.) 110s Preparing to unpack .../libgcc-s1_14-20240412-0ubuntu1_armhf.deb ... 110s Unpacking libgcc-s1:armhf (14-20240412-0ubuntu1) over (14-20240330-1ubuntu2) ... 110s Setting up libgcc-s1:armhf (14-20240412-0ubuntu1) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58470 files and directories currently installed.) 110s Preparing to unpack .../libstdc++6_14-20240412-0ubuntu1_armhf.deb ... 110s Unpacking libstdc++6:armhf (14-20240412-0ubuntu1) over (14-20240330-1ubuntu2) ... 110s Setting up libstdc++6:armhf (14-20240412-0ubuntu1) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58470 files and directories currently installed.) 110s Preparing to unpack .../libffi8_3.4.6-1build1_armhf.deb ... 110s Unpacking libffi8:armhf (3.4.6-1build1) over (3.4.6-1) ... 110s Setting up libffi8:armhf (3.4.6-1build1) ... 110s (Reading database ... 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You need policy admin privileges to manage profiles. 141s 141s Setting up libxau6:armhf (1:1.0.9-1build6) ... 141s Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu6) ... 141s Setting up time (1.9-0.2build1) ... 141s Setting up libkeyutils1:armhf (1.6.3-3build1) ... 141s Setting up pci.ids (0.0~2024.03.31-1) ... 141s Setting up xdg-user-dirs (0.18-1build1) ... 141s Setting up libyaml-0-2:armhf (0.2.5-1build1) ... 141s Setting up libip6tc2:armhf (1.8.10-3ubuntu2) ... 141s Setting up libestr0:armhf (0.1.11-1build1) ... 141s Setting up libfastjson4:armhf (1.2304.0-1build1) ... 141s Setting up libinih1:armhf (55-1ubuntu2) ... 141s Setting up libmaxminddb0:armhf (1.9.1-1build1) ... 141s Setting up libargon2-1:armhf (0~20190702+dfsg-4build1) ... 141s Setting up libxmlb2:armhf (0.3.18-1) ... 141s Setting up libedit2:armhf (3.1-20230828-1build1) ... 141s Setting up rsyslog (8.2312.0-3ubuntu9) ... 141s info: The user `syslog' is already a member of `adm'. 142s apparmor_parser: Unable to replace "rsyslogd". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 142s 144s Setting up netcat-openbsd (1.226-1ubuntu2) ... 144s Setting up libnghttp2-14:armhf (1.59.0-1build4) ... 144s Setting up libsgutils2-1.46-2:armhf (1.46-3ubuntu4) ... 144s Setting up gettext-base (0.21-14ubuntu2) ... 144s Setting up xkb-data (2.41-2ubuntu1) ... 144s Setting up liblzo2-2:armhf (2.10-2build4) ... 144s Setting up hdparm (9.65+ds-1build1) ... 145s Setting up libcom-err2:armhf (1.47.0-2.4~exp1ubuntu4) ... 145s Setting up bzip2 (1.0.8-5.1) ... 145s Setting up man-db (2.12.0-4build2) ... 145s Updating database of manual pages ... 146s apparmor_parser: Unable to replace "/usr/bin/man". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 146s 147s man-db.service is a disabled or a static unit not running, not starting it. 147s Setting up apport-symptoms (0.25) ... 147s Setting up usbutils (1:017-3build1) ... 147s Setting up tzdata (2024a-2ubuntu1) ... 147s 147s Current default time zone: 'Etc/UTC' 147s Local time is now: Fri Apr 19 01:25:54 UTC 2024. 147s Universal Time is now: Fri Apr 19 01:25:54 UTC 2024. 147s Run 'dpkg-reconfigure tzdata' if you wish to change it. 147s 147s Setting up libcap2-bin (1:2.66-5ubuntu2) ... 147s Setting up gcc-13-base:armhf (13.2.0-23ubuntu4) ... 147s Setting up libatasmart4:armhf (0.19-5build3) ... 147s Setting up libx11-data (2:1.8.7-1build1) ... 147s Setting up make (4.3-4.1build2) ... 147s Setting up libmpfr6:armhf (4.2.1-1build1) ... 147s Setting up libnspr4:armhf (2:4.35-1.1build1) ... 147s Setting up libncurses6:armhf (6.4+20240113-1ubuntu2) ... 147s Setting up libdbus-1-3:armhf (1.14.10-4ubuntu4) ... 147s Setting up libsigsegv2:armhf (2.14-1ubuntu2) ... 147s Setting up libfribidi0:armhf (1.0.13-3build1) ... 147s Setting up libbytesize-common (2.10-1ubuntu2) ... 147s Setting up libmnl0:armhf (1.0.5-2build1) ... 147s Setting up patch (2.7.6-7build3) ... 147s Setting up libss2:armhf (1.47.0-2.4~exp1ubuntu4) ... 147s Setting up usb.ids (2024.03.18-1) ... 147s Setting up sudo (1.9.15p5-3ubuntu5) ... 147s Setting up libncursesw6:armhf (6.4+20240113-1ubuntu2) ... 147s Setting up libxtables12:armhf (1.8.10-3ubuntu2) ... 147s Setting up logsave (1.47.0-2.4~exp1ubuntu4) ... 147s Setting up libdb5.3t64:armhf (5.3.28+dfsg2-7) ... 147s Setting up libutempter0:armhf (1.2.1-3build1) ... 147s Setting up libicu74:armhf (74.2-1ubuntu3) ... 147s Setting up nano (7.2-2build1) ... 147s Setting up libpci3:armhf (1:3.10.0-2build1) ... 147s Setting up libnuma1:armhf (2.0.18-1build1) ... 147s Setting up python-apt-common (2.7.7ubuntu1) ... 147s Setting up libnfnetlink0:armhf (1.0.2-2build1) ... 147s Setting up dbus-session-bus-common (1.14.10-4ubuntu4) ... 147s Setting up libuchardet0:armhf (0.0.8-1build1) ... 147s Setting up libeatmydata1:armhf (131-1ubuntu1) ... 147s Setting up libnl-3-200:armhf (3.7.0-0.3build1) ... 147s Setting up libx11-6:armhf (2:1.8.7-1build1) ... 147s Setting up mawk (1.3.4.20240123-1build1) ... 147s Setting up libbytesize1:armhf (2.10-1ubuntu2) ... 147s Setting up tnftp (20230507-2build3) ... 147s Setting up dmidecode (3.5-3build1) ... 147s Setting up dbus-system-bus-common (1.14.10-4ubuntu4) ... 147s Setting up libfido2-1:armhf (1.14.0-1build3) ... 147s Setting up libgpg-error-l10n (1.47-3build2) ... 147s Setting up libdrm-common (2.4.120-2build1) ... 147s Setting up libpam-cap:armhf (1:2.66-5ubuntu2) ... 148s Setting up iputils-ping (3:20240117-1build1) ... 148s Setting up libjson-c5:armhf (0.17-1build1) ... 148s Setting up libevdev2:armhf (1.13.1+dfsg-1build1) ... 148s Setting up sysstat (12.6.1-2) ... 153s Setting up zstd (1.5.5+dfsg2-2build1) ... 153s Setting up dbus-bin (1.14.10-4ubuntu4) ... 153s Setting up libonig5:armhf (6.9.9-1build1) ... 153s Setting up iputils-tracepath (3:20240117-1build1) ... 153s Setting up libkmod2:armhf (31+20240202-2ubuntu6) ... 153s Setting up libpopt0:armhf (1.19+dfsg-1build1) ... 153s Setting up ethtool (1:6.7-1build1) ... 153s Setting up sg3-utils (1.46-3ubuntu4) ... 153s Setting up ncurses-term (6.4+20240113-1ubuntu2) ... 153s Setting up libxkbcommon0:armhf (1.6.0-1build1) ... 153s Setting up logrotate (3.21.0-2build1) ... 154s logrotate.service is a disabled or a static unit not running, not starting it. 154s Setting up eatmydata (131-1ubuntu1) ... 154s Setting up libpython3.12-stdlib:armhf (3.12.3-1) ... 154s Setting up numactl (2.0.18-1build1) ... 154s Setting up bind9-libs:armhf (1:9.18.24-0ubuntu5) ... 154s Setting up openssh-client (1:9.6p1-3ubuntu13) ... 154s Setting up python3.12 (3.12.3-1) ... 156s Setting up libxext6:armhf (2:1.3.4-1build2) ... 156s Setting up screen (4.9.1-1build1) ... 157s Setting up libnftnl11:armhf (1.2.6-2build1) ... 157s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu4) ... 158s update-initramfs: deferring update (trigger activated) 160s e2scrub_all.service is a disabled or a static unit not running, not starting it. 161s Setting up libnss3:armhf (2:3.98-1build1) ... 161s Setting up dbus-daemon (1.14.10-4ubuntu4) ... 162s Setting up kmod (31+20240202-2ubuntu6) ... 165s Setting up sg3-utils-udev (1.46-3ubuntu4) ... 166s update-initramfs: deferring update (trigger activated) 166s Setting up libnl-route-3-200:armhf (3.7.0-0.3build1) ... 166s Setting up dbus-user-session (1.14.10-4ubuntu4) ... 166s Setting up libflashrom1:armhf (1.3.0-2.1ubuntu2) ... 166s Setting up dbus (1.14.10-4ubuntu4) ... 166s A reboot is required to replace the running dbus-daemon. 166s Please reboot the system when convenient. 167s Setting up ftp (20230507-2build3) ... 167s Setting up pciutils (1:3.10.0-2build1) ... 167s Setting up libdrm2:armhf (2.4.120-2build1) ... 167s Setting up dracut-install (060+5-1ubuntu3) ... 167s Setting up xauth (1:1.1.2-1build1) ... 167s Setting up libnetfilter-conntrack3:armhf (1.0.9-6build1) ... 167s Setting up libnl-genl-3-200:armhf (3.7.0-0.3build1) ... 167s Setting up libcryptsetup12:armhf (2:2.7.0-1ubuntu4) ... 167s Setting up bind9-host (1:9.18.24-0ubuntu5) ... 167s Setting up rsync (3.2.7-1ubuntu1) ... 169s rsync.service is a disabled or a static unit not running, not starting it. 169s Setting up libpython3-stdlib:armhf (3.12.3-0ubuntu1) ... 169s Setting up cryptsetup-bin (2:2.7.0-1ubuntu4) ... 169s Setting up openssh-sftp-server (1:9.6p1-3ubuntu13) ... 169s Setting up libnftables1:armhf (1.0.9-1build1) ... 169s Setting up nftables (1.0.9-1build1) ... 169s Setting up openssh-server (1:9.6p1-3ubuntu13) ... 175s Setting up e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu4) ... 175s Setting up iptables (1.8.10-3ubuntu2) ... 175s Setting up htop (3.3.0-4build1) ... 175s Setting up python3 (3.12.3-0ubuntu1) ... 176s Setting up python3-netifaces:armhf (0.11.0-2build3) ... 176s Setting up bind9-dnsutils (1:9.18.24-0ubuntu5) ... 176s Setting up python3-systemd (235-1build4) ... 176s Setting up python3-cffi-backend:armhf (1.16.0-2build1) ... 176s Setting up cloud-init (24.1.3-0ubuntu3) ... 179s Setting up python3-gdbm:armhf (3.12.3-0ubuntu1) ... 179s Setting up python3-problem-report (2.28.1-0ubuntu1) ... 179s Setting up python3-apt (2.7.7ubuntu1) ... 179s Setting up ufw (0.36.2-6) ... 185s Setting up python3-apport (2.28.1-0ubuntu1) ... 187s Setting up apport-core-dump-handler (2.28.1-0ubuntu1) ... 191s Setting up apport (2.28.1-0ubuntu1) ... 191s Installing new version of config file /etc/apport/crashdb.conf ... 193s apport-autoreport.service is a disabled or a static unit not running, not starting it. 193s Processing triggers for debianutils (5.17build1) ... 193s Processing triggers for install-info (7.1-3build2) ... 193s Processing triggers for initramfs-tools (0.142ubuntu24) ... 193s Processing triggers for libc-bin (2.39-0ubuntu8) ... 193s Processing triggers for systemd (255.4-1ubuntu7) ... 196s Reading package lists... 196s Building dependency tree... 196s Reading state information... 198s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 205s autopkgtest [01:26:52]: rebooting testbed after setup commands that affected boot 254s autopkgtest [01:27:41]: testbed running kernel: Linux 5.15.0-102-generic #112-Ubuntu SMP Tue Mar 5 16:49:56 UTC 2024 285s autopkgtest [01:28:12]: @@@@@@@@@@@@@@@@@@@@ apt-source cpl-plugin-xshoo 310s Get:1 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-xshoo 3.5.3+dfsg-1build4 (dsc) [2542 B] 310s Get:2 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-xshoo 3.5.3+dfsg-1build4 (tar) [1634 kB] 310s Get:3 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-xshoo 3.5.3+dfsg-1build4 (diff) [11.6 kB] 310s gpgv: Signature made Mon Apr 1 05:40:12 2024 UTC 310s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 310s gpgv: Can't check signature: No public key 311s dpkg-source: warning: cannot verify inline signature for ./cpl-plugin-xshoo_3.5.3+dfsg-1build4.dsc: no acceptable signature found 311s autopkgtest [01:28:38]: testing package cpl-plugin-xshoo version 3.5.3+dfsg-1build4 313s autopkgtest [01:28:40]: build not needed 316s autopkgtest [01:28:43]: test test-recipe.py: preparing testbed 326s Reading package lists... 326s Building dependency tree... 326s Reading state information... 327s Starting pkgProblemResolver with broken count: 0 327s Starting 2 pkgProblemResolver with broken count: 0 327s Done 327s The following additional packages will be installed: 327s cpl-plugin-xshoo libblas3 libcext0 libcfitsio10t64 libcplcore26 libcpldfs26 327s libcpldrs26 libcplui26 liberfa1 libfftw3-double3 libfftw3-single3 327s libgfortran5 libgomp1 libgsl27 libgslcblas0 libjs-jquery 327s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 327s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-sphinxdoc 327s libjs-underscore liblapack3 libwcs8 python3-astropy 327s python3-astropy-iers-data python3-coverage python3-cpl python3-dateutil 327s python3-erfa python3-hypothesis python3-iniconfig python3-numpy 327s python3-packaging python3-pluggy python3-ply python3-pytest 327s python3-pytest-arraydiff python3-pytest-astropy 327s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 327s python3-pytest-filter-subpackage python3-pytest-mock 327s python3-pytest-remotedata python3-sortedcontainers 327s Suggested packages: 327s cpl-plugin-xshoo-calib cpl-plugin-xshoo-doc libfftw3-bin libfftw3-dev 327s gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html libxml2-utils 327s python-astropy-doc python3-astropy-affiliated python3-bs4 python3-h5py 327s python3-matplotlib python3-pandas python-coverage-doc gdb 327s python-hypothesis-doc gcc gfortran python3-dev python-ply-doc 327s python-pytest-mock-doc python-sortedcontainers-doc 327s Recommended packages: 327s javascript-common libjs-jquery-datatables python3-scipy python3-click 328s The following NEW packages will be installed: 328s autopkgtest-satdep cpl-plugin-xshoo libblas3 libcext0 libcfitsio10t64 328s libcplcore26 libcpldfs26 libcpldrs26 libcplui26 liberfa1 libfftw3-double3 328s libfftw3-single3 libgfortran5 libgomp1 libgsl27 libgslcblas0 libjs-jquery 328s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 328s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-sphinxdoc 328s libjs-underscore liblapack3 libwcs8 python3-astropy 328s python3-astropy-iers-data python3-coverage python3-cpl python3-dateutil 328s python3-erfa python3-hypothesis python3-iniconfig python3-numpy 328s python3-packaging python3-pluggy python3-ply python3-pytest 328s python3-pytest-arraydiff python3-pytest-astropy 328s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 328s python3-pytest-filter-subpackage python3-pytest-mock 328s python3-pytest-remotedata python3-sortedcontainers 328s 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. 328s Need to get 19.4 MB/19.4 MB of archives. 328s After this operation, 80.2 MB of additional disk space will be used. 328s Get:1 /tmp/autopkgtest.enIquT/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [728 B] 330s Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 331s Get:3 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2ubuntu2 [11.5 kB] 331s Get:4 http://ftpmaster.internal/ubuntu noble/universe armhf libcext0 armhf 7.3.2+ds-1build3 [24.9 kB] 331s Get:5 http://ftpmaster.internal/ubuntu noble/universe armhf libcfitsio10t64 armhf 4.3.1-1.1build2 [504 kB] 331s Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 14-20240412-0ubuntu1 [125 kB] 332s Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libfftw3-double3 armhf 3.3.10-1ubuntu3 [369 kB] 332s Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libfftw3-single3 armhf 3.3.10-1ubuntu3 [376 kB] 332s Get:9 http://ftpmaster.internal/ubuntu noble/universe armhf libcplcore26 armhf 7.3.2+ds-1build3 [498 kB] 333s Get:10 http://ftpmaster.internal/ubuntu noble/universe armhf libcplui26 armhf 7.3.2+ds-1build3 [34.5 kB] 333s Get:11 http://ftpmaster.internal/ubuntu noble/universe armhf libcpldfs26 armhf 7.3.2+ds-1build3 [39.4 kB] 333s Get:12 http://ftpmaster.internal/ubuntu noble/universe armhf libwcs8 armhf 8.2.2+ds-3build2 [235 kB] 334s Get:13 http://ftpmaster.internal/ubuntu noble/universe armhf libcpldrs26 armhf 7.3.2+ds-1build3 [68.7 kB] 334s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libgslcblas0 armhf 2.7.1+dfsg-6ubuntu2 [77.8 kB] 334s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libgsl27 armhf 2.7.1+dfsg-6ubuntu2 [827 kB] 335s Get:16 http://ftpmaster.internal/ubuntu noble/universe armhf cpl-plugin-xshoo armhf 3.5.3+dfsg-1build4 [2013 kB] 341s Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 342s Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran5 armhf 14-20240412-0ubuntu1 [316 kB] 342s Get:19 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-metadata all 12-4 [6582 B] 342s Get:20 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB] 343s Get:21 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 343s Get:22 http://ftpmaster.internal/ubuntu noble/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 343s Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libjs-sphinxdoc all 7.2.6-6 [149 kB] 343s Get:24 http://ftpmaster.internal/ubuntu noble/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 348s Get:25 http://ftpmaster.internal/ubuntu noble/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 348s Get:26 http://ftpmaster.internal/ubuntu noble/main armhf python3-packaging all 24.0-1 [41.1 kB] 348s Get:27 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pluggy all 1.4.0-1 [20.4 kB] 348s Get:28 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest all 7.4.4-1 [305 kB] 349s Get:29 http://ftpmaster.internal/ubuntu noble/main armhf python3-dateutil all 2.8.2-3ubuntu1 [79.4 kB] 349s Get:30 http://ftpmaster.internal/ubuntu noble/main armhf python3-sortedcontainers all 2.4.0-2 [27.6 kB] 349s Get:31 http://ftpmaster.internal/ubuntu noble/universe armhf python3-hypothesis all 6.98.15-1 [311 kB] 350s Get:32 http://ftpmaster.internal/ubuntu noble/main armhf python3-numpy armhf 1:1.26.4+ds-6ubuntu1 [3541 kB] 355s Get:33 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-arraydiff all 0.6.1-2 [10.2 kB] 355s Get:34 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-astropy-header all 0.2.2-1 [8190 B] 355s Get:35 http://ftpmaster.internal/ubuntu noble/universe armhf python3-coverage armhf 7.4.4+dfsg1-0ubuntu2 [146 kB] 355s Get:36 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 355s Get:37 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-cov all 4.1.0-1 [21.5 kB] 355s Get:38 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-doctestplus all 1.2.0-1 [23.1 kB] 355s Get:39 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-filter-subpackage all 0.2.0-1 [6094 B] 355s Get:40 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-mock all 3.12.0-1.1 [11.3 kB] 355s Get:41 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-remotedata all 0.4.1-1 [8650 B] 355s Get:42 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-astropy all 0.11.0-1 [5902 B] 355s Get:43 http://ftpmaster.internal/ubuntu noble/main armhf python3-ply all 3.11-6 [46.5 kB] 355s Get:44 http://ftpmaster.internal/ubuntu noble/universe armhf python3-astropy-iers-data all 0.2024.01.01.00.33.39-1 [2046 kB] 358s Get:45 http://ftpmaster.internal/ubuntu noble/universe armhf liberfa1 armhf 2.0.1-1 [130 kB] 358s Get:46 http://ftpmaster.internal/ubuntu noble/universe armhf python3-erfa armhf 2.0.1.1+ds-3 [309 kB] 358s Get:47 http://ftpmaster.internal/ubuntu noble/universe armhf python3-astropy armhf 6.0.0-1ubuntu2 [3771 kB] 362s Get:48 http://ftpmaster.internal/ubuntu noble/universe armhf python3-cpl armhf 0.7.4-2build10 [33.5 kB] 362s Fetched 19.4 MB in 34s (569 kB/s) 362s Selecting previously unselected package libjs-jquery. 362s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58461 files and directories currently installed.) 363s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 363s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 363s Selecting previously unselected package libjs-jquery-hotkeys. 363s Preparing to unpack .../01-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2ubuntu2_all.deb ... 363s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2ubuntu2) ... 363s Selecting previously unselected package libcext0:armhf. 363s Preparing to unpack .../02-libcext0_7.3.2+ds-1build3_armhf.deb ... 363s Unpacking libcext0:armhf (7.3.2+ds-1build3) ... 363s Selecting previously unselected package libcfitsio10t64:armhf. 363s Preparing to unpack .../03-libcfitsio10t64_4.3.1-1.1build2_armhf.deb ... 363s Unpacking libcfitsio10t64:armhf (4.3.1-1.1build2) ... 363s Selecting previously unselected package libgomp1:armhf. 363s Preparing to unpack .../04-libgomp1_14-20240412-0ubuntu1_armhf.deb ... 363s Unpacking libgomp1:armhf (14-20240412-0ubuntu1) ... 363s Selecting previously unselected package libfftw3-double3:armhf. 363s Preparing to unpack .../05-libfftw3-double3_3.3.10-1ubuntu3_armhf.deb ... 363s Unpacking libfftw3-double3:armhf (3.3.10-1ubuntu3) ... 363s Selecting previously unselected package libfftw3-single3:armhf. 363s Preparing to unpack .../06-libfftw3-single3_3.3.10-1ubuntu3_armhf.deb ... 363s Unpacking libfftw3-single3:armhf (3.3.10-1ubuntu3) ... 363s Selecting previously unselected package libcplcore26:armhf. 363s Preparing to unpack .../07-libcplcore26_7.3.2+ds-1build3_armhf.deb ... 363s Unpacking libcplcore26:armhf (7.3.2+ds-1build3) ... 363s Selecting previously unselected package libcplui26:armhf. 363s Preparing to unpack .../08-libcplui26_7.3.2+ds-1build3_armhf.deb ... 363s Unpacking libcplui26:armhf (7.3.2+ds-1build3) ... 363s Selecting previously unselected package libcpldfs26:armhf. 363s Preparing to unpack .../09-libcpldfs26_7.3.2+ds-1build3_armhf.deb ... 363s Unpacking libcpldfs26:armhf (7.3.2+ds-1build3) ... 363s Selecting previously unselected package libwcs8:armhf. 364s Preparing to unpack .../10-libwcs8_8.2.2+ds-3build2_armhf.deb ... 364s Unpacking libwcs8:armhf (8.2.2+ds-3build2) ... 364s Selecting previously unselected package libcpldrs26:armhf. 364s Preparing to unpack .../11-libcpldrs26_7.3.2+ds-1build3_armhf.deb ... 364s Unpacking libcpldrs26:armhf (7.3.2+ds-1build3) ... 364s Selecting previously unselected package 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Setting up python3-cpl (0.7.4-2build10) ... 377s Setting up autopkgtest-satdep (0) ... 377s Processing triggers for man-db (2.12.0-4build2) ... 378s Processing triggers for libc-bin (2.39-0ubuntu8) ... 400s (Reading database ... 62339 files and directories currently installed.) 400s Removing autopkgtest-satdep (0) ... 407s autopkgtest [01:30:14]: test test-recipe.py: [----------------------- 415s Recipe xsh_2dmap: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'detectarclines-fit-win-hsize': 6, 'detectarclines-search-win-hsize': 3, 'detectarclines-running-median-hsize': 0, 'detectarclines-wavesol-deg-lambda': 5, 'detectarclines-wavesol-deg-order': 4, 'detectarclines-wavesol-deg-slit': 1, 'detectarclines-min-sn': 5.0, 'detectarclines-find-lines-center': 'gaussian', 'detectarclines-clip-sigma': 2.0, 'detectarclines-clip-niter': 0, 'detectarclines-clip-frac': 0.7, 'dispersol-deg-x': 4, 'dispersol-deg-y': 5, 'model-maxit': 500, 'model-anneal-factor': 1.0, 'model-scenario': 4} 415s Docstring: Creates a wavelength and spatial resampling solution, a clean arc line 415s list 415s 415s This recipe creates a wavelength and spatial resampling solution, a 415s clean arc line list. a residual map and a wave map. Input Frames: 415s Raw Frame (Tag = WAVE_arm) Arc Line List (Tag = ARC_LINE_LIST_arm) 415s Order Table (Tag = ORDER_TAB_EDGES_arm) Master Bias (Tag = 415s MASTER_BIAS_arm) [poly mode] Wave Solution (Tag = 415s WAVE_TAB_GUESS_arm) [poly mode] Theoretical Map (Tag = 415s THEO_TAB_MULT_arm) [physical model mode] model cfg table (Tag = 415s XSH_MOD_CFG_OPT_FMT_arm) [OPTIONAL] Master Dark (Tag = 415s MASTER_DARK_arm) [OPTIONAL] Non-linear Bad Pixel Map (Tag = 415s BP_MAP_NL_arm) [OPTIONAL] Reference Bad Pixel Map (Tag = 415s BP_MAP_RP_arm) [OPTIONAL] Reference list to monitor line intensity 415s (Tag = ARC_LINE_LIST_INTMON_arm) Prepare the frames. For UVB,VIS: 415s Subtract Master Bias. Subtract Master Dark. For NIR: Subtract ON 415s OFF Compute Wavelength Solution, clean arc line list, residual 415s table, wave map Products: Wavelength table solution, PRO.CATG = 415s WAVE_TAB_2D_arm [poly mode] A Residual tab, 415s PRO.CATG=WAVE_RESID_TAB_SLIT_arm A Wavelelength image map, 415s PRO.CATG=WAVE_MAP_arm. [if model-wavemap-compute=TRUE] A Slit image 415s map, PRO.CATG=SLIT_MAP_NIR [if model-wavemap-compute=TRUE] A 415s Dispersion solution table, PRO.CATG=DISP_TAB_NIR An Arc frame in 415s pre format bias subtracted, PRO.CATG=WAVE_ON_arm The optimized 415s model cfg frame, PRO.CATG=XSH_MOD_CFG_OPT_2D_arm [if physical model 415s mode]. 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are 415s deleted. (str; default: 'no') 415s debug-level: Additional xshooter debug level. 415s One of 'none', 'low', 'medium', 415s 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file 415s name. (bool; default: False) 415s decode-bp: Integer representation of the 415s bits to be considered bad when 415s decoding the bad pixel mask 415s pixel values. Most frequent 415s codes relevant for the user: 415s 0: good pixel, 8: pick-up 415s noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: 415s hot pixel, 512: dark pixel, 415s 4096: A/D converted saturation, 415s 32768: non linear pixel, 415s 1048576: extrapolated flux in 415s NIR, 4194304: Interpolated flux 415s during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no 415s correction 1: mean overscan 415s correction 2: mean prescan 415s correction 3: (mean pre+mean 415s overscan)/2 correction (int; 415s default: 1) 415s detectarclines-fit-win-hsize: Half window size (HWS) in pixels 415s for the line 2D fitting window 415s (total window size = 2*HWS+1) 415s (int; default: 6) 415s detectarclines-search-win-hsize: Half window size (HWS) in pixels 415s for the line search box around 415s the expected position (total 415s window size = 2*HWS+1) [bin 415s units] (int; default: 3) 415s detectarclines-running-median-hsize: Half window size in pixels (HWS) 415s for the running median box (int; 415s default: 0) 415s detectarclines-wavesol-deg-lambda: Degree in lambda in the 415s polynomial solution 415s X=f(lambda,order,slit) and 415s Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 5) 415s detectarclines-wavesol-deg-order: Degree in order in the 415s polynomial solution 415s X=f(lambda,order,slit) and 415s Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 4) 415s detectarclines-wavesol-deg-slit: Degree in slit in the polynomial 415s solution X=f(lambda,order,slit) 415s and Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 1) 415s detectarclines-min-sn: Minimum signal-to-noise ratio to 415s filter lines [xsh_predict: 415s UVB,VIS=5,NIR=4; xsh_2dmap: 415s UVB=3, VIS=6, NIR=10] (float; 415s default: 5.0) 415s detectarclines-find-lines-center: Method used to find the center 415s of the lines: gaussian, 415s barycenter. Gaussian method 415s applies a Gaussian fit to the 415s line. Barycenter method computes 415s the line centroid. (str; 415s default: 'gaussian') 415s detectarclines-clip-sigma: Kappa value in sigma clipping 415s during the polynomial solution 415s fit (POLY mode) (float; default: 415s 2.0) 415s detectarclines-clip-niter: Number of iterations in sigma 415s clipping during the polynomial 415s solution fit (POLY mode) (int; 415s default: 0) 415s detectarclines-clip-frac: Minimal fractions of bad pixel 415s allowed in sigma clipping 415s duringthe polynomial solution 415s fit (POLY mode) (float; default: 415s 0.7) 415s dispersol-deg-x: Degree in X in the polynomial 415s dispersion solution 415s lambda=f(X,Y) and slit=f(X,Y) 415s (int; default: 4) 415s dispersol-deg-y: Degree in Y in the polynomial 415s dispersion solution 415s lambda=f(X,Y) and slit=f(X,Y) 415s (int; default: 5) 415s model-maxit: Number/10 of annealing 415s iterations (physical model 415s mode). (int; default: 500) 415s model-anneal-factor: Multiplier applied to the 415s automatic parameter ranges (i.e. 415s when scenario!=0). For routine 415s operations should be 1.0. 415s (physical model mode). (float; 415s default: 1.0) 415s model-scenario: selects preset flag and range 415s combinations appropriate to 415s common scenarios: 0 - No 415s scenario, input cfg flags and 415s limitsused. 1 - scenario 415s appropriate for the 415s startuprecipe (large ranges for 415s parameters affecting single ph 415s exposures, dist coeff fixed) 2 415s - Like 1, but includes 415s parameters affecting all ph 415s positions 3 - Scenario for use 415s in fine tuning cfg to match 415s routine single pinhole 415s exposures. All parameters 415s affecting 1ph exposures except 415s dist coeffs are included and 415s parameter ranges are small. (For 415s use by predict in 1ph case). 4 415s - Like 3 but includes parameters 415s affecting all ph positions 415s (Standard for use by predict in 415s 9ph case and 2dmap). (int; 415s default: 4) 415s Author: R. Haigron, P. Bristow, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_cfg_recover: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'first-anneal': False, 'arm': 'vis', 'name_i': 'line_xy_ord.txt', 'niter': 100000, 'coord_frame': 1, 'last-step': False, 'plot': False, 'ima_tresh_min': 40.0, 'cor_prescan': False, 'method': 'safefit', 'offx': 0.0, 'offy': 0.0, 'slit': 5, 'gfit_box_sy': 20, 'peak_line_fwhm': 4, 'peak_kappa': 5.0, 'peak_factor': 10.0, 'peak_match_x': 10, 'peak_match_y': 20, 'pm_ord_sel': 1, 'pm_radius': 20.0, 'pm_tolerance': 0.1, 'anneal_niter': 1000} 415s Docstring: Optimizes a model configuration to match data taken after a major 415s format change 415s 415s This recipe creates a wavelength solution and an order table. Input 415s Frames : - [UVB, VIS] A RAW frame (Format = RAW, Tag = FMTCHK_arm) 415s - [NIR] Two RAW frames (Format = RAW, Tag = 415s FMTCHK_arm_ON,FMTCHK_arm_OFF) - The old model cfg table (Format = 415s TABLE, Tag = XSH_MOD_CFG_TAB_arm) - A ref. line list. The model 415s computes corresponding positions (Format = TABLE, Tag = 415s ARC_LINE_LIST_arm) - [UVB,VIS,OPTIONAL] A master bias (Format = 415s PRE, Tag = MASTER_BIAS_arm) - [UVB,VIS,OPTIONAL] A master dark 415s (Format = PRE, Tag = MASTER_DARK_arm) - [OPTIONAL-Required if 415s method=pm,peaks] An order table (Format = TABLE, Tag = 415s ORDER_TAB_CENTR_arm) - [OPTIONAL-Required if first-anneal=TRUE] 415s A table with measured line positions (Format = TABLE, Tag = 415s XSH_MEASCOORD_arm) Products : - if first-anneal=FALSE & last- 415s step=FALSE nothing - if first-anneal=TRUE & last-step=FALSE 415s an optimized model configuration, PRO.CATG=XSH_MOD_CFG_arm - if 415s last-step=TRUE an optimized model configuration, 415s PRO.CATG=XSH_MOD_FAN_arm an optimized model configuration, 415s PRO.CATG=XSH_MOD_CFG_OPT_arm an quality control table, 415s PRO.CATG=MODEL_GUESS_XY_arm the model theoretical map 415s corresponding to the optimized model config, 415s PRO.CATG=THEO_TAB_MULT_arm, THEO_TAB_IFU_arm, and THEO_TAB_SING_arm 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; default: 415s 'no') 415s debug-level: Additional xshooter debug level. One of 'none', 415s 'low', 'medium', 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; default: 415s False) 415s decode-bp: Integer representation of the bits to be considered 415s bad when decoding the bad pixel mask pixel values. 415s Most frequent codes relevant for the user: 0: good 415s pixel, 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: calibration file 415s defect, 256: hot pixel, 512: dark pixel, 4096: 415s A/D converted saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; default: 415s 2144337919) 415s first-anneal: Run first annealing (TRUE) or not (FALSE)See recipe 415s man-page % Input frames (bool; default: False) 415s arm: Arm setting: (str; default: 'vis') 415s name_i: Filename with wavelength,x,y,order: (str; default: 415s 'line_xy_ord.txt') 415s niter: No of iterations for first anneal (int; default: 415s 100000) 415s coord_frame: Co-ordinate frame for centroids (0=raw,1=pre) (int; 415s default: 1) 415s last-step: Run last step (TRUE) or not (FALSE)See recipe man- 415s page % Input frames (bool; default: False) 415s plot: Display plot (TRUE) or not (FALSE) (bool; default: 415s False) 415s ima_tresh_min: Min thresh raw image. (float; default: 40.0) 415s cor_prescan: Correct for prescan (bool; default: False) 415s method: Model predictions correction method. safefit: safe 415s fitgfit: 2D Gaussian line fitpeaks: line peaks 415s detectionpm: line peaks detection & pattern match 415s (str; default: 'safefit') 415s offx: X offset to model predictions (float; default: 0.0) 415s offy: Y offset to model predictions (float; default: 0.0) 415s slit: Extraction slit (int; default: 5) 415s gfit_box_sy: Gauss fit Y search box size for lines on actual frame 415s (int; default: 20) 415s peak_line_fwhm: The FWHM used in line convolution, in pixel units 415s (int; default: 4) 415s peak_kappa: The kappa value, used to identify line peaks if 415s max>kappa*stdev+median, max is a valid peak where 415s max, stdev,median are computed on the extracted 415s spectrum (float; default: 5.0) 415s peak_factor: Relative Intensity threshold factor for line peaks 415s detection (float; default: 10.0) 415s peak_match_x: Radii for line peaks matches (int; default: 10) 415s peak_match_y: Radii for line peaks matches (int; default: 20) 415s pm_ord_sel: From guess line and peaks positions are extracted the 415s ones in the range [ord_min,ord_min+pm_ord_sel] (int; 415s default: 1) 415s pm_radius: Search radius applied in final pattern matching (data 415s units). (float; default: 20.0) 415s pm_tolerance: Max relative difference of angles and scales from 415s their median value for match acceptance. (float; 415s default: 0.1) 415s anneal_niter: Simulated annealing iterations (int; default: 1000) 415s Author: A. Modigliani, P. Bristow 415s 415s 415s Recipe xsh_flexcomp: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'detectarclines-fit-win-hsize': 6, 'detectarclines-search-win-hsize': 3, 'detectarclines-running-median-hsize': 0, 'detectarclines-wavesol-deg-lambda': 5, 'detectarclines-wavesol-deg-order': 5, 'detectarclines-min-sn': 5.0, 'detectarclines-find-lines-center': 'gaussian', 'detectarclines-clip-sigma': 2.0, 'detectarclines-clip-niter': 10, 'detectarclines-clip-frac': 0.7, 'dispersol-deg-x': 4, 'dispersol-deg-y': 5, 'model-maxit': 1000, 'model-anneal-factor': 1.0, 'model-scenario': 3} 415s Docstring: Compute the flexure of the instrument 415s 415s This recipe computes the flexure of the instrument and correct CAL 415s files. Input Frames : - [UVB, VIS] One RAW frame (Format = RAW, 415s Tag = AFF_ATT_arm) - [NIR] Two RAW frames ((Format = RAW, Tag = 415s AFC_ATT_arm_ON,AFC_ATT_arm_OFF) - An arc line list (Format = 415s TABLE, Tag = ARC_LINE_LIST_AFC_arm) - A spectral format table 415s frame (Format = TABLE, Tag = SPECTRAL_FORMAT_TAB_arm) - [UVB,VIS] 415s A master bias (Format = PRE, Tag = MASTER_BIAS_arm) - [UVB,VIS] A 415s master dark (Format = PRE, Tag = MASTER_DARK_arm) - An order table 415s frame (Format = TABLE, Tag = ORDER_TAB_EDGES_IFU_arm) - [OPTIONAL] A 415s non-linear badpixel map (Tag = BP_MAP_NL_arm) - [OPTIONAL] A 415s reference badpixel map (Tag = BP_MAP_RP_arm) - [poly mode] A wave 415s solution frame (Format = TABLE, Tag = WAVE_TAB_2D_arm) - [physical 415s model mode] A model cfg table (Format = TABLE, Tag = 415s XSH_MOD_CFG_OPT_2D_arm) Products : - [poly mode] An updated 415s wave solution frame (Format = TABLE, Tag = WAVE_TAB_AFC_arm) - 415s [physical model mode] An updated model cfg table (Format = TABLE, Tag 415s = XSH_MOD_CFG_OPT_AFC_arm) - An updated order table frame (Format 415s = TABLE, Tag = ORDER_TAB_AFC_IFU_arm) - [poly mode] A dispersion 415s table frame (Format = TABLE, Tag = DISP_TAB_AFC_arm) 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are 415s deleted. (str; default: 'no') 415s debug-level: Additional xshooter debug level. 415s One of 'none', 'low', 'medium', 415s 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file 415s name. (bool; default: False) 415s decode-bp: Integer representation of the 415s bits to be considered bad when 415s decoding the bad pixel mask 415s pixel values. Most frequent 415s codes relevant for the user: 415s 0: good pixel, 8: pick-up 415s noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: 415s hot pixel, 512: dark pixel, 415s 4096: A/D converted saturation, 415s 32768: non linear pixel, 415s 1048576: extrapolated flux in 415s NIR, 4194304: Interpolated flux 415s during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no 415s correction 1: mean overscan 415s correction 2: mean prescan 415s correction 3: (mean pre+mean 415s overscan)/2 correction (int; 415s default: 1) 415s detectarclines-fit-win-hsize: Half window size (HWS) in pixels 415s for the line 2D fitting window 415s (total window size = 2*HWS+1) 415s (int; default: 6) 415s detectarclines-search-win-hsize: Half window size (HWS) in pixels 415s for the line search box around 415s the expected position (total 415s window size = 2*HWS+1) [bin 415s units] (int; default: 3) 415s detectarclines-running-median-hsize: Half window size in pixels (HWS) 415s for the running median box (int; 415s default: 0) 415s detectarclines-wavesol-deg-lambda: Degree in lambda in the 415s polynomial solution 415s X=f(lambda,order,slit) and 415s Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 5) 415s detectarclines-wavesol-deg-order: Degree in order in the 415s polynomial solution 415s X=f(lambda,order,slit) and 415s Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 5) 415s detectarclines-min-sn: Minimum signal-to-noise ratio to 415s filter lines [xsh_predict: 415s UVB,VIS=5,NIR=4; xsh_2dmap: 415s UVB=3, VIS=6, NIR=10] (float; 415s default: 5.0) 415s detectarclines-find-lines-center: Method used to find the center 415s of the lines: gaussian, 415s barycenter. Gaussian method 415s applies a Gaussian fit to the 415s line. Barycenter method computes 415s the line centroid. (str; 415s default: 'gaussian') 415s detectarclines-clip-sigma: Kappa value in sigma clipping 415s during the polynomial solution 415s fit (POLY mode) (float; default: 415s 2.0) 415s detectarclines-clip-niter: Number of iterations in sigma 415s clipping during the polynomial 415s solution fit (POLY mode) (int; 415s default: 10) 415s detectarclines-clip-frac: Minimal fractions of bad pixel 415s allowed in sigma clipping 415s duringthe polynomial solution 415s fit (POLY mode) (float; default: 415s 0.7) 415s dispersol-deg-x: Degree in X in the polynomial 415s dispersion solution 415s lambda=f(X,Y) and slit=f(X,Y) 415s (int; default: 4) 415s dispersol-deg-y: Degree in Y in the polynomial 415s dispersion solution 415s lambda=f(X,Y) and slit=f(X,Y) 415s (int; default: 5) 415s model-maxit: Number/10 of annealing 415s iterations if in physical model 415s mode. (int; default: 1000) 415s model-anneal-factor: Multiplier applied to the 415s automatic parameter ranges (i.e. 415s when scenario!=0). For routine 415s operations should be 1.0. 415s (physical model mode). (float; 415s default: 1.0) 415s model-scenario: selects preset flag and range 415s combinations appropriate to 415s common scenarios: -1 - Only the 415s position across the slit and 415s camera focal length are open 0 415s - No scenario, input cfg flags 415s and limits used. 1 - 415s scenario appropriate for the 415s startup recipe (large ranges 415s for parameters affecting 415s single ph exposures, dist 415s coeff fixed) 2 - Like 1, but 415s includes parameters 415s affecting all ph positions 3 - 415s Scenario for use in fine tuning 415s cfg to match routine wavecal 415s exposures. All parameters 415s affecting 1ph exposures 415s except dist coeffs are included 415s and parameter ranges are 415s small. (For use by flexcomp in 415s 1ph case). 4 - Like 3 but 415s includes parameters affecting 415s all ph positions (Standard for 415s use by flexcomp in 9ph case and 415s 2dmap). 5 - Like 4 but includes 415s also dist coeffs 6 - Just dist 415s coeffs (and chipx, chipy) (int; 415s default: 3) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer 415s 415s 415s Recipe xsh_geom_ifu: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'crh-clip-kappa': 5.0, 'crh-clip-niter': 5, 'crh-clip-frac': 0.7, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0, 'removecrhsingle-sigmalim': 5.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 4.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'localizeifu-bckg-deg': 50, 'localizeifu-smooth-hsize': 3, 'localizeifu-wavelet-nscales': 5, 'localizeifu-wavelet-hf-skip': 2, 'localizeifu-sigma-low': 0.05, 'localizeifu-sigma-up': 0.95, 'localizeifu-snr-low': 0.05, 'localizeifu-snr-up': 0.95, 'localizeifu-slitlow-edges-mask': 0.0, 'localizeifu-slitup-edges-mask': 0.0, 'localizeifu-use-skymask': False, 'localizeifu-chunk-hsize': 0, 'correctifu-niter': 3, 'correctifu-lambdaref': -1.0, 'correctifu-lambdaref-hsize': 2.5, 'do-cube': False, 'compute-map': True, 'check-afc': True, 'flat-method': 'blaze'} 415s Docstring: Produces the spatial geometry of the IFU pattern on the sky 415s 415s This recipe Produces the spatial geometry of the IFU pattern on the 415s sky Input Frames : - A set of n science frames ( n == 1 or >=3, Tag 415s = TRACE_arm) - [UVB,VIS] A master bias frame (Tag = MASTER_BIAS_arm) 415s - [OPTIONAL] A master dark frame (Tag = MASTER_DARK_arm) - A master 415s flat frame (Tag = MASTER_FLAT_IFU_arm) - An AFC corrected model 415s order edges table for IFU frame (Tag = ORDER_TAB_AFC_IFU_arm) - 415s [PHYSMOD] An AFC corrected model cfg frame (Tag = 415s XSH_MOD_CFG_OPT_AFC_arm) - [POLY] An AFC corrected model wavesol 415s frame (Tag = WAVE_TAB_AFC_arm) - An AFC corrected dispersion 415s solution frame (Tag = DISP_TAB_AFC_arm) - [OPTIONAL] A badpixel map 415s (Tag = BADPIXEL_MAP_arm) Products : - A set of shift offset tables 415s (Tag = OFFSET_TAB_slitlet_IFU_arm) 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. 415s (str; default: 'no') 415s debug-level: Additional xshooter debug level. One 415s of 'none', 'low', 'medium', 'high' 415s (str; default: 'none') 415s time-stamp: Add timestamp to product file name. 415s (bool; default: False) 415s decode-bp: Integer representation of the bits to 415s be considered bad when decoding the 415s bad pixel mask pixel values. Most 415s frequent codes relevant for the user: 415s 0: good pixel, 8: pick-up noise, 415s 16: cosmic-ray removed, 32: cosmic- 415s ray unremoved, 128: calibration 415s file defect, 256: hot pixel, 512: 415s dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 415s 4194304: Interpolated flux during 415s extraction. (int; default: 415s 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no 415s correction 1: mean overscan 415s correction 2: mean prescan correction 415s 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. 415s (str; default: 'median') 415s klow: Kappa used to clip low level values, 415s when method is set to 'mean' (float; 415s default: 5.0) 415s khigh: Kappa used to clip high level values, 415s when method is set to 'mean' (float; 415s default: 5.0) 415s crh-clip-kappa: Kappa value in sigma clipping during 415s CRH rejection using multiple frames 415s (float; default: 5.0) 415s crh-clip-niter: Number of iterations in sigma 415s clipping during CRH rejection using 415s multiple frames (int; default: 5) 415s crh-clip-frac: Minimal ratio of points accepted / 415s total in sigma clipping during CRH 415s rejection using multiple frames 415s (float; default: 0.7) 415s background-edges-margin: X margin to order edge to define 415s background sampling points (int; 415s default: 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; 415s default: 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; 415s default: 9) 415s background-poly-kappa: Poly mode kappa value of kappa-sigma- 415s clip outliers removal. (float; 415s default: 10.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag 415s CRHs (see van Dokkum, 415s PASP,113,2001,p1420-27) (float; 415s default: 5.0) 415s removecrhsingle-flim: Minimum contrast between the 415s Laplacian image and the fine 415s structure image that a point must 415s have to be flagged as CRH. (see van 415s Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; 415s default: 4) 415s rectify-kernel: Name of the Interpolation Kernel 415s Used. Possible values are: tanh, 415s sinc, sinc2, lanczos, hamming, hann. 415s (str; default: 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin 415s units]. (float; default: 4.0) 415s rectify-bin-lambda: Wavelength step in the output 415s spectrum [nm] (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the 415s output spectrum [arcsec] (float; 415s default: -1.0) 415s localizeifu-bckg-deg: Degree (<=2) of the polynomial 415s component in the cross-dispersion 415s profile fit (int; default: 50) 415s localizeifu-smooth-hsize: Half-size of the median filter for 415s smoothing the cross-dispersion 415s profile prior to localization (int; 415s default: 3) 415s localizeifu-wavelet-nscales: Number of scales used for wavelet a 415s trous algorithm (int; default: 5) 415s localizeifu-wavelet-hf-skip: Number of high frequency scales 415s skipped from the wavelet 415s decomposition (int; default: 2) 415s localizeifu-sigma-low: Gaussian fits of the cross-dispersion 415s profile whose FWHM is lower than this 415s value are rejected (float; default: 415s 0.05) 415s localizeifu-sigma-up: Gaussian fits of the cross-dispersion 415s profile whose FWHM is larger than 415s this value are rejected (float; 415s default: 0.95) 415s localizeifu-snr-low: Gaussian fits of the cross-dispersion 415s profile whose SNR is lower than this 415s value are rejected (float; default: 415s 0.05) 415s localizeifu-snr-up: Gaussian fits of the cross-dispersion 415s profile whose SNR is larger than this 415s value are rejected (float; default: 415s 0.95) 415s localizeifu-slitlow-edges-mask: in arsec (float; default: 0.0) 415s localizeifu-slitup-edges-mask: in arsec (float; default: 0.0) 415s localizeifu-use-skymask: TRUE if we want to mask sky lines 415s using SKY_LINE_LIST file. (bool; 415s default: False) 415s localizeifu-chunk-hsize: Half size of chunk [bin] (int; 415s default: 0) 415s correctifu-niter: Number of iterations in computing the 415s localization shifts of the IFU 415s slitlets (int; default: 3) 415s correctifu-lambdaref: Reference wavelength where the 415s reference localization on the slit is 415s chosen (float; default: -1.0) 415s correctifu-lambdaref-hsize: HAlf size in nm to estimate reference 415s wavelength (float; default: 2.5) 415s do-cube: if TRUE creates a data cube (bool; 415s default: False) 415s compute-map: if TRUE recompute (wave and slit) 415s maps from the dispersion solution. 415s (bool; default: True) 415s check-afc: Input AFC corrected model/wave 415s solution and science frame check.If 415s TRUE the recipe verify that the input 415s mode/wave solution is AFC corrected, 415s its INS.OPTIi.NAME is 'Pin_0.5 ', and 415s its OBS.ID and OBS.TARG.NAME values 415s matches with the corresponding values 415s of the science frame. (bool; default: 415s True) 415s flat-method: method adopted for flat: (str; 415s default: 'blaze') 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer 415s 415s 415s Recipe xsh_lingain: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'method': 'PTC', 'order': 3, 'kappa': 3.0, 'niter': 5, 'llx': -1, 'lly': -1, 'urx': -1, 'ury': -1, 'ref_level': 10000, 'intermediate': False, 'autocorr': False, 'collapse': True, 'rescale': True, 'pix2pix': True, 'bpmbin': False, 'm': 26, 'filter': -1, 'n': 26, 'tolerance': 0.1, 'pafgen': False, 'pafname': 'xsh_lingain', 'exts': 0, 'fpn_method': 'HISTOGRAM', 'fpn_smooth': 13, 'saturation_limit': 65535.0, 'gain_threshold': 65535.0, 'coeffs_cube_split': False, 'llx1': -1, 'lly1': -1, 'urx1': -1, 'ury1': -1, 'llx2': -1, 'lly2': -1, 'urx2': -1, 'ury2': -1, 'llx3': -1, 'lly3': -1, 'urx3': -1, 'ury3': -1, 'llx4': -1, 'lly4': -1, 'urx4': -1, 'ury4': -1, 'llx5': -1, 'lly5': -1, 'urx5': -1, 'ury5': -1} 415s Docstring: Computes detector's gain/linearity-map 415s 415s This recipe computes detector linearity coefficients and gain Input 415s Frames : arm = UVB-VIS: - A set of n RAW linearity frames 415s (Format=RAW, n >=8, Tag = LINEARITY_arm_ON) - A set of n RAW bias 415s frames (Format=RAW, n >=1, Tag = LINEARITY_arm_OFF) arm = NIR: - A 415s set of n RAW linearity on frames (Format=RAW, n >=8, Tag = 415s LINEARITY_arm_ON) - A set of n RAW linearity off frames (Format=RAW, 415s n >=8, Tag = LINEARITY_arm_OFF) - [OPTIONAL] a static bad pixel map 415s (PRO.CATG=BP_MAP_RP_arm) Note: on and off frames are taken in pairs 415s sequence: OFF-ON-ON-OFF, at least 16 frames. Products : - A 415s linearity map table, PRO.CATG = BP_MAP_LIN_NIR - A gain table, 415s PRO.CATG = GAIN_INFO - A cube cointaining the linearity 415s coefficients, PRO.CATG = COEFFS_CUBE_arm - A linearity map image 415s (RAW format), PRO.CATG = RAW_BP_MAP_NL_arm - A linearity map image 415s (PRE format), PRO.CATG = BP_MAP_NL_arm 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 'none', 415s 'low', 'medium', 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel mask 415s pixel values. Most frequent codes relevant for 415s the user: 0: good pixel, 8: pick-up noise, 415s 16: cosmic-ray removed, 32: cosmic-ray 415s unremoved, 128: calibration file defect, 256: 415s hot pixel, 512: dark pixel, 4096: A/D 415s converted saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s method: Method to be used when computing GAIN. Methods 415s appliable: . By default PTC method will 415s be applied. (str; default: 'PTC') 415s order: Polynomial order for the fit (Linearity) (int; 415s default: 3) 415s kappa: Kappa value for the kappa-sigma clipping (Gain) 415s (float; default: 3.0) 415s niter: Number of iterations to compute rms (Gain) (int; 415s default: 5) 415s llx: x coordinate of the lower-left point of the region 415s of interest. If not modified, default value will 415s be 1. (int; default: -1) 415s lly: y coordinate of the lower-left point of the region 415s of interest. If not modified, default value will 415s be 1. (int; default: -1) 415s urx: x coordinate of the upper-right point of the 415s region of interest. If not modified, default value 415s will be X dimension of the input image. (int; 415s default: -1) 415s ury: y coordinate of the upper-right point of the 415s region of interest. If not modified, default value 415s will be Y dimension of the input image. (int; 415s default: -1) 415s ref_level: User reference level (int; default: 10000) 415s intermediate: De-/Activate intermediate products (bool; default: 415s False) 415s autocorr: De-/Activate the autocorr option (bool; default: 415s False) 415s collapse: De-/Activate the collapse option (bool; default: 415s True) 415s rescale: De-/Activate the image rescale option (bool; 415s default: True) 415s pix2pix: De-/Activate the computation with pixel to pixel 415s accuracy (bool; default: True) 415s bpmbin: De-/Activate the binary bpm option (bool; default: 415s False) 415s m: Maximum x-shift for the autocorr (int; default: 415s 26) 415s filter: Upper limit of Median flux to be filtered (int; 415s default: -1) 415s n: Maximum y-shift for the autocorr (int; default: 415s 26) 415s tolerance: Tolerance for pair discrimination (float; default: 415s 0.1) 415s pafgen: Generate PAF file (bool; default: False) 415s pafname: Specific name for PAF file (str; default: 415s 'xsh_lingain') 415s exts: Activate the multi-exts option. Choose -1 to 415s process all extensions. Choose an extension number 415s to process the appropriate extension. (int; 415s default: 0) 415s fpn_method: Method for computing Fixed Pattern Noise (SMOOTH 415s or HISTOGRAM) (str; default: 'HISTOGRAM') 415s fpn_smooth: template size in pixels for smoothing during FPN 415s computation (only for SMOOTH method) (int; 415s default: 13) 415s saturation_limit: all frames with mean saturation above the limit 415s would not be used in linearity calculation (float; 415s default: 65535.0) 415s gain_threshold: all frames with mean flux above the threshold 415s would not be used in gain calculation (float; 415s default: 65535.0) 415s coeffs_cube_split: if TRUE, the recipe writes as many COEFFS_CUBE_Pi 415s (i=0..order) as the value of the order parameter 415s in a separate file (bool; default: False) 415s llx1: x coord of the lower-left point of the first field 415s used for contamination measurement. If not 415s modified, default value will be 1. (int; default: 415s -1) 415s lly1: y coord of the lower-left point of the first field 415s used for contamination measurement. If not 415s modified, default value will be 1. (int; default: 415s -1) 415s urx1: x coord of the upper-right point of the first 415s field used for contamination measurement. If not 415s modified, default value will be X dimension of the 415s input image. (int; default: -1) 415s ury1: y coord of the upper-right point of the first 415s field used for contamination measurement. If not 415s modified, default value will be Y dimension of the 415s input image. (int; default: -1) 415s llx2: x coord of the lower-left point of the second 415s field used for contamination measurement. If not 415s modified, default value will be 1. (int; default: 415s -1) 415s lly2: y coord of the lower-left point of the second 415s field used for contamination measurement. If not 415s modified, default value will be 1. (int; default: 415s -1) 415s urx2: x coord of the upper-right point of the second 415s field used for contamination measurement. If not 415s modified, default value will be half of the X 415s dimension of the input image. (int; default: -1) 415s ury2: y coord of the upper-right point of the second 415s field used for contamination measurement. If not 415s modified, default value will be half of the Y 415s dimension of the input image. (int; default: -1) 415s llx3: x coord of the lower-left point of the third field 415s used for contamination measurement. If not 415s modified, default value will be 1. (int; default: 415s -1) 415s lly3: y coord of the lower-left point of the third field 415s used for contamination measurement. If not 415s modified, default value will be half of the Y 415s dimension of the input image. (int; default: -1) 415s urx3: x coord of the upper-right point of the third 415s field used for contamination measurement. If not 415s modified, default value will be half of X 415s dimension of the image. (int; default: -1) 415s ury3: y coord of the upper-right point of the third 415s field used for contamination measurement. If not 415s modified, default value will be Y dimension of the 415s image. (int; default: -1) 415s llx4: x coord of the lower-left point of the fourth 415s field used for contamination measurement. If not 415s modified, default value will be half of X 415s dimension of the image. (int; default: -1) 415s lly4: y coord of the lower-left point of the fourth 415s field used for contamination measurement. If not 415s modified, default value will be half of the Y 415s dimension of the input image. (int; default: -1) 415s urx4: x coord of the upper-right point of the fourth 415s field used for contamination measurement. If not 415s modified, default value will be X dimension of the 415s image. (int; default: -1) 415s ury4: y coord of the upper-right point of the fourth 415s field used for contamination measurement. If not 415s modified, default value will be Y dimension of the 415s input image. (int; default: -1) 415s llx5: x coord of the lower-left point of the fifth field 415s used for contamination measurement. If not 415s modified, default value will be half of the X 415s dimension of the input image. (int; default: -1) 415s lly5: y coord of the lower-left point of the fifth field 415s used for contamination measurement. If not 415s modified, default value will be 1. (int; default: 415s -1) 415s urx5: x coord of the upper-right point of the fifth 415s field used for contamination measurement. If not 415s modified, default value will be X dimension of the 415s image. (int; default: -1) 415s ury5: y coord of the upper-right point of the fifth 415s field used for contamination measurement. If not 415s modified, default value will be half of Y 415s dimension of the input image. (int; default: -1) 415s Author: Lander de Bilbao,A.Modigliani 415s 415s 415s Recipe xsh_mbias: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'fpn_llx': 10, 'fpn_lly': 10, 'fpn_urx': 1024, 'fpn_ury': 1024, 'fpn_hsize': 10, 'fpn_nsamples': 100, 'ron_method': 'ALL', 'random_sizex': 10, 'random_nsamples': 100, 'ref1_llx': -1, 'ref1_lly': -1, 'ref1_urx': -1, 'ref1_ury': -1, 'ref2_llx': -1, 'ref2_lly': -1, 'ref2_urx': -1, 'ref2_ury': -1, 'stacking_ks_low': 3, 'stacking_ks_iter': 25, 'struct_refx': -1, 'struct_refy': -1, 'pd_noise_compute': False, 'pd_noise_dc_x': 1, 'pd_noise_dc_y': 1} 415s Docstring: Create the master bias frame 415s 415s This recipe creates a master bias frame by computing the median of all 415s input bias frames. Input Frames : - A set of n RAW frames 415s (Format=RAW, n >=3, Tag = BIAS_arm) - [OPTIONAL] A map of non linear 415s bad pixels (Format=QUP, Tag = BP_MAP_NL_arm) - [OPTIONAL] A map of 415s reference bad pixels (Format = QUP,RAW, Tag = BP_MAP_RP_arm) Products 415s : - A master bias frame (Format=PRE, PRO.CATG = MASTER_BIAS_arm) 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 'none', 415s 'low', 'medium', 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; default: 415s False) 415s decode-bp: Integer representation of the bits to be considered 415s bad when decoding the bad pixel mask pixel values. 415s Most frequent codes relevant for the user: 0: 415s good pixel, 8: pick-up noise, 16: cosmic-ray 415s removed, 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 512: 415s dark pixel, 4096: A/D converted saturation, 415s 32768: non linear pixel, 1048576: extrapolated 415s flux in NIR, 4194304: Interpolated flux during 415s extraction. (int; default: 2144337919) 415s stack-method: Method used to build master frame. (str; default: 415s 'median') 415s klow: Kappa used to clip low level values, when method is 415s set to 'mean' (float; default: 5.0) 415s khigh: Kappa used to clip high level values, when method 415s is set to 'mean' (float; default: 5.0) 415s fpn_llx: Lower left reference area X coordinate for Fixed 415s Pattern Noise computation (int; default: 10) 415s fpn_lly: Lower left reference area Y coordinate for Fixed 415s Pattern Noise computation (int; default: 10) 415s fpn_urx: Upper right reference area X coordinate for Fixed 415s Pattern Noise computation (int; default: 1024) 415s fpn_ury: Upper right reference area Y coordinate for Fixed 415s Pattern Noise computation (int; default: 1024) 415s fpn_hsize: Sample size for Fixed Pattern Noise computation 415s (int; default: 10) 415s fpn_nsamples: Number of sampling points for Fixed Pattern Noise 415s computation (int; default: 100) 415s ron_method: RON computation method (str; default: 'ALL') 415s random_sizex: Region X size for random computation (int; default: 415s 10) 415s random_nsamples: Number of random samples (int; default: 100) 415s ref1_llx: Lower left X of reference region (int; default: -1) 415s ref1_lly: Lower left Y of reference region (int; default: -1) 415s ref1_urx: Upper right X of reference region (int; default: 415s -1) 415s ref1_ury: Upper right Y of reference region (int; default: 415s -1) 415s ref2_llx: Lower left X of reference region (int; default: -1) 415s ref2_lly: Lower left Y of reference region (int; default: -1) 415s ref2_urx: Upper right X of reference region (int; default: 415s -1) 415s ref2_ury: Upper right Y of reference region (int; default: 415s -1) 415s stacking_ks_low: Lower value of kappa-sigma clip in stacking (int; 415s default: 3) 415s stacking_ks_iter: Number of iterations in kappa-sigma clip in 415s stacking (int; default: 25) 415s struct_refx: Reference X value to compute structure (int; 415s default: -1) 415s struct_refy: Reference Y value to compute structure (int; 415s default: -1) 415s pd_noise_compute: Determine Fixed Pattern Noise. If TRUE the Fixed 415s Pattern Noise power spectrum is determined. (bool; 415s default: False) 415s pd_noise_dc_x: x-size (pixel) of the mask starting at (x,y) = 415s (1,1). (int; default: 1) 415s pd_noise_dc_y: y-size (pixel) of the mask starting at (x,y) = 415s (1,1). (int; default: 1) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_mdark: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'bp-output': False, 'crh-clip-kappa': -1.0, 'crh-clip-niter': 3, 'crh-clip-frac': 0.7, 'noise-clip-kappa': 9.0, 'noise-clip-niter': 5, 'noise-clip-frac': 0.7, 'noise-clip-diff': 0.0, 'noise-lower-rejection': 10.0, 'noise-higher-rejection': 10.0, 'ref1_llx': -1, 'ref1_lly': -1, 'ref1_urx': -1, 'ref1_ury': -1, 'ron_llx': -1, 'ron_lly': -1, 'ron_urx': -1, 'ron_ury': -1, 'ron_hsize': 4, 'ron_nsamples': 100, 'fpn_llx': -1, 'fpn_lly': -1, 'fpn_urx': -1, 'fpn_ury': -1, 'fpn_hsize': 4, 'fpn_nsamples': 100} 415s Docstring: Create the master dark frame 415s 415s This recipe creates a master dark frame Input Frames : - A set of n 415s RAW frames (Format=RAW, n >=3, Tag = DARK_arm) - [UVB,VIS] A master 415s bias frame (Format=PRE, Tag = MASTER_BIAS_arm) - [OPTIONAL] A map of 415s non linear bad pixels (Format=QUP, Tag = BP_MAP_NL_arm) - [OPTIONAL] 415s A map of reference bad pixels (Format = QUP,RAW, Tag = BP_MAP_RP_arm) 415s Products : - A master dark frame (Format=PRE, PRO.CATG = 415s MASTER_DARK_arm) A dark frame, (Format=PRE, PRO.CATG = DARK_arm) 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 8: 415s pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: calibration 415s file defect, 256: hot pixel, 512: dark 415s pixel, 4096: A/D converted saturation, 415s 32768: non linear pixel, 1048576: 415s extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 1: 415s mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 5.0) 415s bp-output: Flag indicating whether the noise bad pixel 415s map is to be computed (bool; default: False) 415s crh-clip-kappa: Kappa value in sigma clipping during CRH 415s rejection using multiple frames (float; 415s default: -1.0) 415s crh-clip-niter: Number of iterations in sigma clipping during 415s CRH rejection using multiple frames (int; 415s default: 3) 415s crh-clip-frac: Minimal ratio of points accepted / total in 415s sigma clipping during CRH rejection using 415s multiple frames (float; default: 0.7) 415s noise-clip-kappa: Multiple of sigma in sigma clipping (float; 415s default: 9.0) 415s noise-clip-niter: Number of iterations in sigma clipping (int; 415s default: 5) 415s noise-clip-frac: Minimal fractions of bad pixel allowed 415s (float; default: 0.7) 415s noise-clip-diff: Minimum relative change in sigma for sigma 415s clipping (float; default: 0.0) 415s noise-lower-rejection: Lower rejection percentile to flag bad pixels 415s via noise (float; default: 10.0) 415s noise-higher-rejection: Upper rejection percentile to flag bad pixels 415s via noise (float; default: 10.0) 415s ref1_llx: Lower left X of reference region (int; 415s default: -1) 415s ref1_lly: Lower left Y of reference region (int; 415s default: -1) 415s ref1_urx: Upper right X of reference region (int; 415s default: -1) 415s ref1_ury: Upper right Y of reference region (int; 415s default: -1) 415s ron_llx: Lower left X of reference region to measure 415s RON (int; default: -1) 415s ron_lly: Lower left Y of reference region to measure 415s RON (int; default: -1) 415s ron_urx: Upper right X of reference region to measure 415s RON (int; default: -1) 415s ron_ury: Upper right Y of reference region to measure 415s RON (int; default: -1) 415s ron_hsize: Sampling area size (int; default: 4) 415s ron_nsamples: Number of random samples (int; default: 100) 415s fpn_llx: Lower left reference area X coordinate for 415s Fixed Pattern Noise computation (int; 415s default: -1) 415s fpn_lly: Lower left reference area Y coordinate for 415s Fixed Pattern Noise computation (int; 415s default: -1) 415s fpn_urx: Upper right reference area X coordinate for 415s Fixed Pattern Noise computation (int; 415s default: -1) 415s fpn_ury: Upper right reference area Y coordinate for 415s Fixed Pattern Noise computation (int; 415s default: -1) 415s fpn_hsize: Sample size for Fixed Pattern Noise 415s computation (int; default: 4) 415s fpn_nsamples: Number of sampling points for Fixed Pattern 415s Noise computation (int; default: 100) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_mflat: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'detectorder-edges-search-win-hsize': 50, 'detectorder-edges-flux-thresh': 0.4, 'detectorder-min-sn': -1.0, 'detectorder-min-order-size-x': -1, 'detectorder-chunk-half-size': 1, 'detectorder-slitlet-low-factor': 1.0, 'detectorder-slitlet-up-factor': 1.0, 'detectorder-fixed-slice': True, 'detectorder-slice-trace-method': 'auto', 'detectorder-qc-mode': False, 'detectorder-d2-min-sn': 60.0, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0} 415s Docstring: Create the master flat and the orders edges traces table frames 415s 415s This recipe creates the master flat and the orders edges traces table 415s frames. Input Frames : - [UVB] A set of n RAW frames (Format = 415s RAW, n>=3, Tag = FLAT_D2_mode_UVB, mode=SLIT/IFU) - [UVB] A set of 415s n RAW frames (Format = RAW, n>=3, Tag = FLAT_QTH_mode_UVB) - [VIS] 415s A set of n RAW frames (Format = RAW, n>=3, Tag = FLAT_mode_VIS) - 415s [NIR] A set of n x n RAW frames ((Format = RAW, n>=3, Tag = 415s FLAT_mode_NIR_ON, FLAT_mode_NIR_OFF) - A spectral format table 415s (Format = PRE, Tag = SPECTRAL_FORMAT_TAB_arm) - An order table 415s (Format = TABLE, Tag = ORDER_TAB_CENTR_arm) - [UVB,VIS] A master 415s bias (Format = PRE, Tag = MASTER_BIAS_arm) - [OPTIONAL] A map of 415s reference bad pixel (Format = QUP,RAW, Tag = BP_MAP_RP_arm) - 415s [OPTIONAL] A map of non linear pixel (Format = QUP,RAW, Tag = 415s BP_MAP_NL_arm) - [OPTIONAL,UVB,VIS] A master dark (Format = PRE, 415s Tag = MASTER_DARK_arm) Products : - An updated order table with 415s edge UP and edge LOW (Format = TABLE, TAG = ORDER_TAB_EDGES_mode_arm) 415s - A master flat (Format = PRE, PRO.CATG = MASTER_FLAT_mode_arm) - 415s The inter-order background frame (Format = PRE, PRO.CATG = 415s MFLAT_BACK_mode_arm) - The inter-order background sampling points 415s grid table (Format = PRE, PRO.CATG = MFLAT_GRID_BACK_mode_arm) 415s Prepare the flat frames. Stack and sigma clip all the flat frames. 415s Subtract master bias. Subtract master dark. Detect order edge. 415s Subtract background. Create the Master Flat. 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are 415s deleted. (str; default: 'no') 415s debug-level: Additional xshooter debug level. 415s One of 'none', 'low', 'medium', 415s 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file 415s name. (bool; default: False) 415s decode-bp: Integer representation of the 415s bits to be considered bad when 415s decoding the bad pixel mask pixel 415s values. Most frequent codes 415s relevant for the user: 0: good 415s pixel, 8: pick-up noise, 16: 415s cosmic-ray removed, 32: cosmic- 415s ray unremoved, 128: calibration 415s file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D 415s converted saturation, 32768: non 415s linear pixel, 1048576: 415s extrapolated flux in NIR, 415s 4194304: Interpolated flux during 415s extraction. (int; default: 415s 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no 415s correction 1: mean overscan 415s correction 2: mean prescan 415s correction 3: (mean pre+mean 415s overscan)/2 correction (int; 415s default: 1) 415s stack-method: Method used to build master 415s frame. (str; default: 'median') 415s klow: Kappa used to clip low level 415s values, when method is set to 415s 'mean' (float; default: 5.0) 415s khigh: Kappa used to clip high level 415s values, when method is set to 415s 'mean' (float; default: 5.0) 415s detectorder-edges-search-win-hsize: During extraction the local 415s spatial profile (=cross-order) of 415s the spectrum is determined by 415s collapsing the 2-dimensional 415s spectrum along the dispersion 415s axis. This parameter defines the 415s half size of the region across 415s which the spectrum is collapsed. 415s This parameter affects flagged 415s pixels interpolation. In case of 415s spectrum gaps the recommended 415s optimal value is: (size_of_gap 415s [nm]/(2*size_of_pixel [nm])+1) 415s (int; default: 50) 415s detectorder-edges-flux-thresh: Threshold in relative flux 415s (compared to the central flux) 415s below which the order edges are 415s defined (float; default: 0.4) 415s detectorder-min-sn: Minimum signal-to-noise ratio at 415s the centroid of the orders (60 415s for SLIT-UVB,VIS,NIR, 20 for IFU- 415s UVB,VIS, 4 for IFU-NIR (float; 415s default: -1.0) 415s detectorder-min-order-size-x: Minimum order size in pixels 415s along X direction [60 for 415s UVB,VIS, 40 for NIR] (int; 415s default: -1) 415s detectorder-chunk-half-size: Half size in pixels of the chunks 415s in Y direction (int; default: 1) 415s detectorder-slitlet-low-factor: Factor for slitlet on lower edge 415s slitlet (IFU) (float; default: 415s 1.0) 415s detectorder-slitlet-up-factor: Factor for slitlet on upper edge 415s (IFU) (float; default: 1.0) 415s detectorder-fixed-slice: If true the size of slitlet is 415s fixed (IFU) (bool; default: True) 415s detectorder-slice-trace-method: method adopted for IFU slice 415s tracing ('fixed' for SLIT and 415s 'sobel' for IFU): (str; default: 415s 'auto') 415s detectorder-qc-mode: If true allows one to skip edge 415s detection on orders below 415s detectorder- min-sn (oly for QC 415s mode, not to be set by normal 415s users) (bool; default: False) 415s detectorder-d2-min-sn: minimum signal noise ratio in D2 415s lamp frame in order (float; 415s default: 60.0) 415s background-edges-margin: X margin to order edge to define 415s background sampling points (int; 415s default: 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; 415s default: 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; 415s default: 9) 415s background-poly-kappa: Poly mode kappa value of kappa- 415s sigma-clip outliers removal. 415s (float; default: 10.0) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_orderpos: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'detectcontinuum-search-win-hsize': 5, 'detectcontinuum-running-win-hsize': 0, 'detectcontinuum-fit-win-hsize': 5, 'detectcontinuum-center-thresh-fac': 0.0, 'detectcontinuum-ordertab-step-y': 1, 'detectcontinuum-ordertab-deg-y': 5, 'detectcontinuum-clip-res-max': 0.5, 'detectcontinuum-clip-sigma': 5.0, 'detectcontinuum-clip-niter': 5, 'detectcontinuum-clip-frac': 0.4} 415s Docstring: Create the orders centre traces table file 415s 415s This recipe creates the orders centre traces table. Input Frames for 415s UVB and VIS: Raw file (Tag = ORDERDEF_arm_D2) Master Dark (Tag = 415s MASTER_DARK_arm) Master Bias (Tag = MASTER_BIAS_arm) Input Frames 415s for NIR: Raw file ON(Tag = ORDERDEF_NIR_ON) Raw file OFF(Tag = 415s ORDERDEF_NIR_OFF) Input Frames for all arms Guess order table (Tag = 415s ORDER_TAB_GUESS_arm) Spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - [OPTIONAL] A map of non linear bad pixels 415s (Format=QUP, Tag = BP_MAP_NL_arm) - [OPTIONAL] A map of reference 415s bad pixels (Format = QUP,RAW, Tag = BP_MAP_RP_arm) Prepare PRE 415s structures. For NIR, subtract NIR-OFF from NIR-ON. For UVB and NIR, 415s Substract the master Bias and master dark. Detect Orders and calculate 415s the order table. The final products are: An updated Order Table, 415s PRO.CATG=ORDER_TABLE_CENTR_arm. A order trace residuals Table, 415s PRO.CATG=ORDERPOS_RESID_TAB_arm. The order pos frame bias 415s subtracted, PRO.CATG=ORDERDEF_ON_arm. 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are 415s deleted. (str; default: 'no') 415s debug-level: Additional xshooter debug level. 415s One of 'none', 'low', 'medium', 415s 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file 415s name. (bool; default: False) 415s decode-bp: Integer representation of the bits 415s to be considered bad when decoding 415s the bad pixel mask pixel values. 415s Most frequent codes relevant for 415s the user: 0: good pixel, 8: 415s pick-up noise, 16: cosmic-ray 415s removed, 32: cosmic-ray 415s unremoved, 128: calibration file 415s defect, 256: hot pixel, 512: 415s dark pixel, 4096: A/D converted 415s saturation, 32768: non linear 415s pixel, 1048576: extrapolated 415s flux in NIR, 4194304: Interpolated 415s flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no 415s correction 1: mean overscan 415s correction 2: mean prescan 415s correction 3: (mean pre+mean 415s overscan)/2 correction (int; 415s default: 1) 415s detectcontinuum-search-win-hsize: Half window size in pixels for the 415s 1D box to search for the maximum 415s in the cross-dispersion profile 415s (int; default: 5) 415s detectcontinuum-running-win-hsize: Half window size for the running 415s median box during the search for 415s the maximum in the cross- 415s dispersion profile (int; default: 415s 0) 415s detectcontinuum-fit-win-hsize: Half window size for the fit of 415s the cross-dispersion profile (int; 415s default: 5) 415s detectcontinuum-center-thresh-fac: Threshold factor applied to check 415s that the flux at the fitted peak 415s is higher than error. (float; 415s default: 0.0) 415s detectcontinuum-ordertab-step-y: Step in Y for order centroid 415s detection (int; default: 1) 415s detectcontinuum-ordertab-deg-y: Degree in Y in the polynomial 415s order tracing X=f(Y) (int; 415s default: 5) 415s detectcontinuum-clip-res-max: Maximum allowed residual (before 415s kappa-sigma clip) (float; default: 415s 0.5) 415s detectcontinuum-clip-sigma: Kappa value in sigma clipping 415s during order trace polynomial fit 415s (float; default: 5.0) 415s detectcontinuum-clip-niter: Number of iterations in sigma 415s clipping during order trace 415s polynomial fit (int; default: 5) 415s detectcontinuum-clip-frac: Minimal fractions of points 415s accepted / total in sigma 415s clippingduring order trace 415s polynomial fit (float; default: 415s 0.4) 415s Author: L.Guglielmi,R.Haigron,P.Goldoni,F.Royer, A. Modigliani 415s 415s 415s Recipe xsh_predict: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'detectarclines-fit-win-hsize': 6, 'detectarclines-search-win-hsize': 3, 'detectarclines-running-median-hsize': 0, 'detectarclines-wavesol-deg-lambda': 5, 'detectarclines-wavesol-deg-order': 5, 'detectarclines-ordertab-deg-y': 2, 'detectarclines-min-sn': 5.0, 'detectarclines-find-lines-center': 'gaussian', 'detectarclines-clip-sigma': 2.0, 'detectarclines-clip-niter': 10, 'detectarclines-clip-frac': 0.7, 'model-maxit': 1000, 'model-anneal-factor': 1.0, 'model-scenario': 3} 415s Docstring: Compute a first guess dispersion solution and order table 415s 415s This recipe creates a wavelength solution and an order table. Input 415s Frames : - [UVB, VIS] One RAW frame (Format = RAW, Tag = 415s FMTCHK_arm) - [NIR] Two RAW frames ((Format = RAW, Tag = 415s FMTCHK_arm_ON,FMTCHK_arm_OFF) - A spectral format table (Format = 415s PRE, Tag = SPECTRAL_FORMAT_TAB_arm) - An arc line list (Format = 415s TABLE, Tag = ARC_LINE_LIST_arm) - [UVB,VIS,OPTIONAL] A master bias 415s (Format = PRE, Tag = MASTER_BIAS_arm) - [UVB,VIS,OPTIONAL] A 415s master dark (Format = PRE, Tag = MASTER_DARK_arm) - [OPTIONAL] A 415s reference badpixel map (Format = QUP, Tag = BP_MAP_RP_arm) - 415s [OPTIONAL] A non-linear badpixel map (Format = QUP, Tag = 415s BP_MAP_NL_arm) - [OPTIONAL] Reference list to monitor line 415s intensity (Tag = ARC_LINE_LIST_INTMON_arm) - [poly mode] A 415s theoretical map (Format = TABLE, Tag = THEO_TAB_SING_arm) - 415s [physical model mode] A model cfg table (Format = TABLE, Tag = 415s XSH_MOD_CFG_TAB_arm) Products : - [poly mode] A wavelength 415s solution (Format = TABLE, PRO.CATG = WAVE_TAB_GUESS_arm) - An 415s order table, PRO.CATG = ORDER_TAB_GUESS_arm (if at least 415s degree+1 points are found in each order). - A line 415s identification residual table, PRO.CATG = FMTCHK_RESID_TAB_LINES_arm 415s - The bias subtracted formatcheck frame, PRO.CATG = FMTCHK_ON_arm 415s - [physical model mode]An optimized model configuration table, 415s PRO.CATG = XSH_MOD_CFG_OPT_FMT_ARM Prepare the frames. For UVB,VIS 415s : Subtract Master Bias. Subtract Master Dark For NIR: 415s Subtract ON OFF Compute guess order table and wavelength solution 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are 415s deleted. (str; default: 'no') 415s debug-level: Additional xshooter debug level. 415s One of 'none', 'low', 'medium', 415s 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file 415s name. (bool; default: False) 415s decode-bp: Integer representation of the 415s bits to be considered bad when 415s decoding the bad pixel mask 415s pixel values. Most frequent 415s codes relevant for the user: 415s 0: good pixel, 8: pick-up 415s noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: 415s hot pixel, 512: dark pixel, 415s 4096: A/D converted saturation, 415s 32768: non linear pixel, 415s 1048576: extrapolated flux in 415s NIR, 4194304: Interpolated flux 415s during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no 415s correction 1: mean overscan 415s correction 2: mean prescan 415s correction 3: (mean pre+mean 415s overscan)/2 correction (int; 415s default: 1) 415s detectarclines-fit-win-hsize: Half window size (HWS) in pixels 415s for the line 2D fitting window 415s (total window size = 2*HWS+1) 415s (int; default: 6) 415s detectarclines-search-win-hsize: Half window size (HWS) in pixels 415s for the line search box around 415s the expected position (total 415s window size = 2*HWS+1) [bin 415s units] (int; default: 3) 415s detectarclines-running-median-hsize: Half window size in pixels (HWS) 415s for the running median box (int; 415s default: 0) 415s detectarclines-wavesol-deg-lambda: Degree in lambda in the 415s polynomial solution 415s X=f(lambda,order,slit) and 415s Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 5) 415s detectarclines-wavesol-deg-order: Degree in order in the 415s polynomial solution 415s X=f(lambda,order,slit) and 415s Y=f(lambda,order,slit) (POLY 415s mode) (int; default: 5) 415s detectarclines-ordertab-deg-y: Degree in Y in the polynomial 415s order tracing X=f(Y) (int; 415s default: 2) 415s detectarclines-min-sn: Minimum signal-to-noise ratio to 415s filter lines [xsh_predict: 415s UVB,VIS=5,NIR=4; xsh_2dmap: 415s UVB=3, VIS=6, NIR=10] (float; 415s default: 5.0) 415s detectarclines-find-lines-center: Method used to find the center 415s of the lines: gaussian, 415s barycenter. Gaussian method 415s applies a Gaussian fit to the 415s line. Barycenter method computes 415s the line centroid. (str; 415s default: 'gaussian') 415s detectarclines-clip-sigma: Kappa value in sigma clipping 415s during the polynomial solution 415s fit (POLY mode) (float; default: 415s 2.0) 415s detectarclines-clip-niter: Number of iterations in sigma 415s clipping during the polynomial 415s solution fit (POLY mode) (int; 415s default: 10) 415s detectarclines-clip-frac: Minimal fractions of bad pixel 415s allowed in sigma clipping 415s duringthe polynomial solution 415s fit (POLY mode) (float; default: 415s 0.7) 415s model-maxit: Number/10 of annealing 415s iterations if in physical model 415s mode. (int; default: 1000) 415s model-anneal-factor: Multiplier applied to the 415s automatic parameter ranges (i.e. 415s when scenario!=0). For routine 415s operations should be 1.0. 415s (physical model mode). (float; 415s default: 1.0) 415s model-scenario: selects preset flag and range 415s combinations appropriate to 415s common scenarios: 0 - No 415s scenario, input cfg flags and 415s limits used. 1 - scenario 415s appropriate for the startup 415s recipe (large ranges for 415s parameters affecting single ph 415s exposures, dist coeff fixed). 2 415s - Like 1, but includes 415s parameters affecting all ph 415s positions. 3 - Scenario for use 415s in fine tuning cfg to match 415s routine single pinhole 415s exposures. All parameters 415s affecting 1ph exposures except 415s dist coeffs are included and 415s parameter ranges are small. (For 415s use by predict in 1ph case). 4 415s - Like 3 but includes parameters 415s affecting all ph positions 415s (Standard for use by predict in 415s 9ph case and 2dmap). (int; 415s default: 3) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, P. Bristow, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_respon_slit_nod: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 1741684735, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'removecrhsingle-sigmalim': 20.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'rectify-fast': True, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'localize-nod-throw': 0.0, 'extract-method': 'NOD', 'stdextract-interp-hsize': 30, 'combinenod-throwlist': 'throwlist.asc', 'combinenod-method': 'MEAN', 'max-slit': 5.7, 'min-slit': -5.3, 'correct-tellurics': True, 'correct-sky-by-median': True, 'scale-combine-nod-method': 1} 415s Docstring: Reduce STD star frames in SLIT configuration and nod mode 415s 415s This recipe reduces science exposure in SLIT configuration and NOD 415s mode Input Frames : - A set of n Science frames ( n even ), Tag = 415s OBJECT_SLIT_NOD_arm - Spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - [UVB,VIS] A master bias frame (Tag = 415s MASTER_BIAS_arm) - A master flat frame (Tag = MASTER_FLAT_SLIT_arm) 415s - An order table frame(Tag = ORDER_TABLE_EDGES_SLIT_arm) - [poly 415s mode] A wave solution frame(Tag = WAVE_TAB_2D_arm) - [poly mode] A 415s wave map frame(Tag = WAVE_MAP_arm) - [poly mode] A disp table 415s frame(Tag = DISP_TAB_arm) - [physical model mode]A model cfg table 415s (Format = TABLE, Tag = XSH_MOD_CFG_TAB_arm) - [OPTIONAL] A telluric 415s model catalog (Tag = TELL_MOD_CAT_arm arm=VIS,NIR) - A standard star 415s fluxes catalog (Tag = FLUX_STD_CATALOG_arm Type = FLX) - A table to 415s set response sampling points (Tag = RESP_FIT_POINTS_CAT_arm) - 415s [OPTIONAL] An atmospheric extinction table (Tag = ATMOS_EXT_arm) 415s if provided this is the one used to flux calibrate the spectra 415s Products : - [If STD is in catal] The response function (Tag = 415s PREFIX_RESPONSE_ORDER1D_SLIT_arm) - [If STD is in catal] The 415s response function (Tag = PREFIX_RESPONSE_MERGE1D_SLIT_arm) - 415s PREFIX_ORDER2D_arm (2 dimension) - PREFIX_ORDER1D_arm (1 dimension) 415s - PREFIX_MERGE2D_arm (2 dimension) - PREFIX_MERGE1D_arm (1 415s dimension) - PREFIX_WAVE_MAP_arm, wave map image - 415s PREFIX_SLIT_MAP_arm, slit map image - [If STD is in catal] Flux 415s calibrated order-by-order 2D spectrum (Tag = PREFIX_FLUX_ORDER2D_arm) 415s - [If STD is in catal] Flux calibrated order-by-order 1D spectrum (Tag 415s = PREFIX_FLUX_ORDER1D_arm) - [If STD is in catal] Flux calibrated 415s merged 2D spectrum (Tag = PREFIX_FLUX_MERGE2D_arm) - [If STD is in 415s catal] Flux calibrated merged 1D spectrum (Tag = 415s PREFIX_FLUX_MERGE1D_arm) - [If STD is in catal] The efficiency (Tag 415s = EFFICIENCY_SLIT_arm) - where PREFIX is SCI, FLUX, TELL if input 415s raw DPR.TYPE contains OBJECT or FLUX or TELLURIC 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 1741684735) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 20.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s rectify-fast: Fast if TRUE (Rect[B-A] = -Rect[A-B]), in 415s that case only entire pixel shifts are 415s applied. (bool; default: True) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s localize-nod-throw: Step (arcsec) between A and B images in 415s nodding mode. (float; default: 0.0) 415s extract-method: Method used for extraction (LOCALIZATION, 415s NOD) (str; default: 'NOD') 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s combinenod-throwlist: Name of ascii file containing the list of 415s throw shifts with respect to the first 415s exposure (str; default: 'throwlist.asc') 415s combinenod-method: Combination method for nodded frames 415s (MEDIAN, MEAN) (str; default: 'MEAN') 415s max-slit: Lower Slit Limit (localize and extract 415s (float; default: 5.7) 415s min-slit: Upper Slit Limit (localize and extract 415s (float; default: -5.3) 415s correct-tellurics: TRUE if during response computation we 415s apply telluric correction (bool; default: 415s True) 415s correct-sky-by-median: TRUE if the resampled spectrum at each 415s wavelength is median subtracted to remove 415s sky lines (bool; default: True) 415s scale-combine-nod-method: frame scaling when nod frames are combined: 415s 0 (no-scaling); 1 (scaling) (int; default: 415s 1) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich A. Modigliani 415s 415s 415s Recipe xsh_respon_slit_offset: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'removecrhsingle-sigmalim': 20.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'stdextract-interp-hsize': 30, 'combinenod-method': 'MEAN', 'gen-sky': True, 'correct-tellurics': True} 415s Docstring: Compute the response function in SLIT and on/off mode 415s 415s This recipe reduces science exposure in SLIT configuration and on/off 415s mode Input Frames : - A set of n Science frames ( n even ), 415s Tag = STD_FLUX_SLIT_OFFSET_arm, SKY_SLIT_arm - Spectral format table 415s (Tag = SPECTRAL_FORMAT_TAB_arm) - A master flat frame (Tag = 415s MASTER_FLAT_SLIT_arm) - An order table frame(Tag = 415s ORDER_TABLE_EDGES_SLIT_arm) - A wavelength calibration solution 415s frame(Tag = WAVE_TAB_2D_arm) - [OPTIONAL] Table with dispersion 415s coefficients (Tag = DISP_TAB_arm) - [OPTIONAL] A telluric model 415s catalog (Tag = TELL_MOD_CAT_arm arm=VIS,NIR) - A standard star 415s fluxes catalog (Tag = FLUX_STD_CATALOG_arm Type = FLX) - A table to 415s set response sampling points (Tag = RESP_FIT_POINTS_CAT_arm) - An 415s atmospheric extinction table (Tag = ATMOS_EXT_arm) if provided 415s this is the one used to flux calibrate the spectra Products : 415s Products : - [If STD is in catal] The response ord-by-ord function 415s (Tag = RESPONSE_ORDER1D_SLIT_arm) - [If STD is in catal] The 415s response merged function (Tag = RESPONSE_MERGE1D_SLIT_arm) - 415s PREFIX_ORDER2D_arm extracted spectrum, order-by-order, 2D - 415s PREFIX_ORDER1D_arm extracted spectrum, order-by-order, 1D - 415s PREFIX_MERGE2D_arm merged spectrum, 2D - PREFIX_MERGE1D_arm merged 415s spectrum, 1D - [If STD is in catal] Flux calibrated order-by-order 2D 415s spectrum (Tag = PREFIX_FLUX_ORDER2D_arm) - [If STD is in catal] Flux 415s calibrated order-by-order 1D spectrum (Tag = PREFIX_FLUX_ORDER1D_arm) 415s - [If STD is in catal] Flux calibrated merged 2D spectrum (Tag = 415s PREFIX_FLUX_MERGE2D_arm) - [If STD is in catal] Flux calibrated 415s merged 1D spectrum (Tag = PREFIX_FLUX_MERGE1D_arm) - PREFIX_SKY_arm, 415s 2D sky frame - SKY_SLIT_ORDER2D_arm, 2D sky image (order-by-order) - 415s SKY_SLIT_MERGE2D_arm, 2D sky image (merged) - [If STD is in catal] 415s The efficiency (Tag = EFFICIENCY_arm) - PREFIX_WAVE_MAP_arm, wave map 415s image - PREFIX_SLIT_MAP_arm, slit map image - where PREFIX is SCI, 415s FLUX, TELL if input raw DPR.TYPE contains OBJECT or FLUX or TELLURIC 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 20.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s combinenod-method: Combination method for nodded frames 415s (MEDIAN, MEAN) (str; default: 'MEAN') 415s gen-sky: if TRUE a 2D sky frame, a 2D rectified, a 415s 2D merged sky are generated (bool; default: 415s True) 415s correct-tellurics: TRUE if during response computation we 415s apply telluric correction (bool; default: 415s True) 415s Author: D. Bramich, A.Modigliani 415s 415s 415s Recipe xsh_respon_slit_stare: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0, 'removecrhsingle-sigmalim': 20.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'sky-subtract': True, 'sky-bspline-nbkpts-first': 3000, 'sky-bspline-nbkpts-second': 3000, 'sky-bspline-order': 7, 'sky-bspline-niter': 20, 'sky-bspline-kappa': 5.0, 'sky-method': 'MEDIAN', 'bspline-sampling': 'FINE', 'sky-median-hsize': 20, 'sky-slit-edges-mask': 0.5, 'sky-position1': 0.0, 'sky-hheight1': 0.0, 'sky-position2': 0.0, 'sky-hheight2': 0.0, 'stdextract-interp-hsize': 30, 'do-optextract': False, 'optextract-oversample': 5, 'optextract-box-half-size': 10, 'optextract-chunk-size': 50, 'optextract-step-lambda': 0.02, 'optextract-clip-kappa': 3.0, 'optextract-clip-frac': 0.4, 'optextract-clip-niter': 2, 'optextract-niter': 1, 'optextract-method': 'GAUSSIAN', 'correct-tellurics': True} 415s Docstring: Compute the response function in SLIT stare mode 415s 415s This recipe computes the response function for arm Input Frames : - 415s A RAW frame (Tag = STD_FLUX_SLIT_STARE_arm, Type = RAW) - [UVB,VIS] 415s A master bias frame (Tag = MASTER_BIAS_arm, Type = PRE) - A master 415s dark frame (Tag = MASTER_DARK_arm Type = PRE) - A master flat frame 415s (Tag = MASTER_FLAT_SLIT_arm Type = PRE) - An order table frame(Tag = 415s ORDER_TAB_EDGES_arm Type = ORD) - A wave solution frame(Tag = 415s WAVE_TAB_2D_arm, Type = WAV) - [OPTIONAL] Table with dispersion 415s coefficients (Tag = DISP_TAB_arm) - [OPTIONAL] A telluric model 415s catalog (Tag = TELL_MOD_CAT_arm arm=VIS,NIR) - A standard star 415s fluxes catalog (Tag = FLUX_STD_CATALOG_arm Type = FLX) - A table to 415s set response sampling points (Tag = RESP_FIT_POINTS_CAT_arm) - An 415s atmospheric extinction table (Tag = ATMOS_EXT_arm) if provided 415s this is the one used to flux calibrate the spectra - 415s [OPTIONAL,physmod mode] A table listing sky line positions (Tag = 415s SKY_LINE_LIST_arm) this is used to be able to control quality of 415s sky subtraction, for example projecting guess positions on the 415s product SCI_SLIT_STARE_SUB_SKY_arm and is required if sky- 415s method=BSPLINE Products : - [If STD is in catal] The response ord- 415s by-ord function (Tag = PREFIX_RESPONSE_ORDER1D_SLIT_arm) - [If STD 415s is in catal] The response merged function (Tag = 415s PREFIX_RESPONSE_MERGE1D_SLIT_arm) - The extracted 2D specturm (Tag = 415s PREFIX_ORDER2D_arm) - The extracted 1D specturm (Tag = 415s PREFIX_ORDER1D_arm) - The merged 2D specturm (Tag = 415s PREFIX_MERGE2D_arm) - The merged 1D specturm (Tag = 415s PREFIX_MERGE1D_arm) - The merged 2D sky frame (Tag = 415s SLY_SLIT_MERGED2D) - [If STD is in catal] Flux calibrated merged 2D 415s spectrum (Tag = PREFIX_FLUX_ORDER2D_arm) - [If STD is in catal] Flux 415s calibrated merged 1D spectrum (Tag = PREFIX_FLUX_ORDER1D_arm) - [If 415s STD is in catal] Flux calibrated merged 2D spectrum (Tag = 415s PREFIX_FLUX_MERGE2D_arm) - [If STD is in catal] Flux calibrated 415s merged 1D spectrum (Tag = PREFIX_FLUX_MERGE1D_arm) - [If STD is in 415s catal] The efficiency (Tag = EFFICIENCY_SLIT_arm) - where PREFIX is 415s SCI, FLUX, TELL if input raw DPR.TYPE contains OBJECT or FLUX or 415s TELLURIC 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. 415s (str; default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray 415s removed, 32: cosmic-ray unremoved, 415s 128: calibration file defect, 256: hot 415s pixel, 512: dark pixel, 4096: A/D 415s converted saturation, 32768: non linear 415s pixel, 1048576: extrapolated flux in 415s NIR, 4194304: Interpolated flux during 415s extraction. (int; default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean 415s prescan correction 3: (mean pre+mean 415s overscan)/2 correction (int; default: 1) 415s background-edges-margin: X margin to order edge to define 415s background sampling points (int; default: 415s 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; default: 415s 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; default: 415s 9) 415s background-poly-kappa: Poly mode kappa value of kappa-sigma-clip 415s outliers removal. (float; default: 10.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 20.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum 415s [nm] (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 415s 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 415s 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s sky-subtract: TRUE to use subtract sky single. (bool; 415s default: True) 415s sky-bspline-nbkpts-first: Nb of break points for Bezier curve 415s fitting (without localization) (int; 415s default: 3000) 415s sky-bspline-nbkpts-second: Nb of break points for Bezier curve 415s fitting (with localization) (int; default: 415s 3000) 415s sky-bspline-order: Bezier spline order (int; default: 7) 415s sky-bspline-niter: Nb of iterations (int; default: 20) 415s sky-bspline-kappa: Kappa value used to kappa-sigma-clip 415s object (float; default: 5.0) 415s sky-method: Sky subtract Method (BSPLINE, BSPLINE1, 415s BSPLINE2 MEDIAN). BSPLINE is equivalent to 415s BSPLINE1 (str; default: 'MEDIAN') 415s bspline-sampling: BSPLINE sampling. UNIFORM-uses the user 415s defined nbkpts value, corrected for 415s binning, for all orders. FINE: multiplies 415s the user defined nbkpts value, corrected 415s for binning, by a hard coded coefficient 415s optimized on each arm-order) (str; 415s default: 'FINE') 415s sky-median-hsize: Half size of the running median. If sky- 415s method=MEDIAN . (int; default: 20) 415s sky-slit-edges-mask: Size of edges mask in arcsec (float; 415s default: 0.5) 415s sky-position1: Central position of the sky window #1 415s [arcsec] (float; default: 0.0) 415s sky-hheight1: Half size of sky window #1 [arcsec] 415s (float; default: 0.0) 415s sky-position2: Central position of the sky window #2 415s [arcsec] (float; default: 0.0) 415s sky-hheight2: Half size of the sky window #2 [arcsec] 415s (float; default: 0.0) 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s do-optextract: TRUE if we do the optimal extraction 415s (bool; default: False) 415s optextract-oversample: Oversample factor for the science image 415s (int; default: 5) 415s optextract-box-half-size: Extraction box [pixel] (int; default: 10) 415s optextract-chunk-size: Chunk size [bin] (int; default: 50) 415s optextract-step-lambda: Lambda step [nm] (float; default: 0.02) 415s optextract-clip-kappa: Kappa for cosmics ray hits rejection 415s (float; default: 3.0) 415s optextract-clip-frac: Maximum bad pixels fraction for cosmics 415s ray hits rejection (float; default: 0.4) 415s optextract-clip-niter: Maximum number of iterations for cosmics 415s ray hits rejection (int; default: 2) 415s optextract-niter: Number of iterations (int; default: 1) 415s optextract-method: Extraction method GAUSSIAN | GENERAL (str; 415s default: 'GAUSSIAN') 415s correct-tellurics: TRUE if during response computation we 415s apply telluric correction (bool; default: 415s True) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_scired_ifu_offset: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'crh-clip-kappa': 5.0, 'crh-clip-niter': 5, 'crh-clip-frac': 0.7, 'removecrhsingle-sigmalim': 5.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'compute-map': False, 'trace-obj': False, 'check-afc': True, 'cut-uvb-spectrum': True} 415s Docstring: Reduce science IFU on-off exposures and build a 3D cube 415s 415s This recipe Reduce science IFU on-off exposures and build a 3D cube 415s Input Frames : - A set of 2xn Science frames, Tag = 415s OBJECT_IFU_OFFSET_arm, SKY_IFU_arm - A spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - A master flat frame (Tag = 415s MASTER_FLAT_IFU_arm) - An order table frame(Tag = 415s ORDER_TABLE_EDGES_IFU_arm) - 3 wave solution frames, one per slitlet 415s (Tag = WAVE_TAB_ARC_IFU_slitlet_arm) where 'slitlet' is DOWN, 415s CEN or UP - [OPTIONAL] A dispersion table (Tag = DISP_TAB_IFU_arm) 415s - [OPTIONAL] A non-linear badpixel map (Tag = BP_MAP_NL_arm) - 415s [OPTIONAL] A reference badpixel map (Tag = BP_MAP_RP_arm) Products : 415s - Merged 3D data cube (PREFIX_MERGE3D_DATA_OBJ_arm) - QC Traces of 3D 415s data cube (PREFIX_MERGE3D_TRACE_OBJ_arm) - Order by order 3D data 415s cube (PREFIX_ORDER3D_DATA_OBJ_arm) - Order by order 3D qual cube 415s (IFU_CFG_COR_arm) - Order by order 3D qual cube 415s (PREFIX_MERGE3D_DATA_SKY_arm) - where PREFIX is SCI, FLUX, TELL if 415s input raw DPR.TYPE contains OBJECT or FLUX or TELLURIC - 1 Spectrum 415s merge 3D, PRO.CATG=MERGE3D_IFU_arm 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s crh-clip-kappa: Kappa value in sigma clipping during CRH 415s rejection using multiple frames (float; 415s default: 5.0) 415s crh-clip-niter: Number of iterations in sigma clipping 415s during CRH rejection using multiple frames 415s (int; default: 5) 415s crh-clip-frac: Minimal ratio of points accepted / total in 415s sigma clipping during CRH rejection using 415s multiple frames (float; default: 0.7) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 5.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s compute-map: if TRUE recompute (wave and slit) maps from 415s the dispersion solution. If sky-subtract is 415s set to TRUE this must be set to TRUE. 415s (bool; default: False) 415s trace-obj: if TRUE trace object position on each IFU 415s slice. In this case order TAB edges is 415s required (bool; default: False) 415s check-afc: Input AFC corrected model/wave solution and 415s science frame check. If TRUE the recipe 415s verify that the input mode/wave solution is 415s AFC corrected, its INS.OPTIi.NAME is 415s 'Pin_0.5 ', and its OBS.ID and 415s OBS.TARG.NAME values matches with the 415s corresponding values of the science frame. 415s (bool; default: True) 415s cut-uvb-spectrum: TRUE if recipe cuts the UVB spectrum at 556 415s nm (dichroich) (bool; default: True) 415s Author: A.Modigliani, J.Vernet, P. Bristow 415s 415s 415s Recipe xsh_scired_ifu_offset_drl: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'crh-clip-kappa': 5.0, 'crh-clip-niter': 5, 'crh-clip-frac': 0.7, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0, 'removecrhsingle-sigmalim': 5.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': 0.06, 'rectify-bin-slit': 0.21, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'extract-method': 'LOCALIZATION', 'stdextract-interp-hsize': 30, 'shift-offsettab-low': 0.0, 'shift-offsettab-up': 0.0, 'compute-map': True, 'check-afc': True, 'flat-method': 'master'} 415s Docstring: Reduce science exposure in IFU configuration and on/off mode 415s 415s This recipe reduces science exposure in IFU configuration and on/off 415s mode Input Frames : - A set of 2xn Science frames, Tag = 415s OBJECT_IFU_OFFSET_arm, SKY_IFU_arm - A spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - A master flat frame (Tag = 415s MASTER_FLAT_IFU_arm) - An order table frame(Tag = 415s ORDER_TABLE_EDGES_IFU_arm) - 3 wave solution frames, one per slitlet 415s (Tag = WAVE_TAB_ARC_IFU_slitlet_arm) where 'slitlet' is DOWN, 415s CEN or UP - [OPTIONAL] A dispersion table (Tag = DISP_TAB_IFU_arm) 415s - [OPTIONAL] A badpixel map (Tag = BADPIXEL_MAP_arm) Products : - 3 415s Spectrum order tables 2D (1 per slitlet), 415s PRO.CATG=ORDER2D_slitlet_IFU_arm - 3 Spectrum order tables 1D (1 per 415s slitlet), PRO.CATG=ORDER1D_slitlet_IFU_arm - 3 Spectrum merge tables 415s 2D (1 per slitlet), PRO.CATG=MERGE2D_slitlet_IFU_arm - 3 Spectrum 415s merge tables 1D (1 per slitlet), PRO.CATG=MERGE1D_slitlet_IFU_arm - 415s 1 Spectrum merge 3D, PRO.CATG=MERGE3D_IFU_arm 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s crh-clip-kappa: Kappa value in sigma clipping during CRH 415s rejection using multiple frames (float; 415s default: 5.0) 415s crh-clip-niter: Number of iterations in sigma clipping 415s during CRH rejection using multiple frames 415s (int; default: 5) 415s crh-clip-frac: Minimal ratio of points accepted / total in 415s sigma clipping during CRH rejection using 415s multiple frames (float; default: 0.7) 415s background-edges-margin: X margin to order edge to define background 415s sampling points (int; default: 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; default: 415s 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; default: 415s 9) 415s background-poly-kappa: Poly mode kappa value of kappa-sigma-clip 415s outliers removal. (float; default: 10.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 5.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: 0.06) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: 0.21) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s extract-method: Method used for extraction (LOCALIZATION, 415s NOD) (str; default: 'LOCALIZATION') 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s shift-offsettab-low: Global shift of the lower slitlet slit 415s positions, relative to the central 415s one[arcsec]. (float; default: 0.0) 415s shift-offsettab-up: Global shift of the upper slitlet slit 415s positions, relative to the central 415s one[arcsec]. (float; default: 0.0) 415s compute-map: if TRUE recompute (wave and slit) maps from 415s the dispersion solution. If sky-subtract is 415s set to TRUE this must be set to TRUE. 415s (bool; default: True) 415s check-afc: Input AFC corrected model/wave solution and 415s science frame check.If TRUE the recipe 415s verify that the input mode/wave solution is 415s AFC corrected, its INS.OPTIi.NAME is 415s 'Pin_0.5 ', and its OBS.ID and 415s OBS.TARG.NAME values matches with the 415s corresponding values of the science frame. 415s (bool; default: True) 415s flat-method: method adopted for flat: (str; default: 415s 'master') 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer 415s 415s 415s Recipe xsh_scired_ifu_stare: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'crh-clip-kappa': 5.0, 'crh-clip-niter': 5, 'crh-clip-frac': 0.7, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'compute-map': False, 'trace-obj': False, 'check-afc': True, 'cut-uvb-spectrum': True} 415s Docstring: Reduce science IFU stare exposures and build a 3D cube 415s 415s This recipe reduce science IFU stare exposures with 3D cube generation 415s Input Frames : - A set of n Science frames ( n == 1 or >=3, Tag 415s = OBJECT_IFU_STARE_UVB) - A spectral format table frame (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - [UVB,VIS] A master bias frame (Tag = 415s MASTER_BIAS_arm) - A master dark frame (Tag = MASTER_DARK_arm) - A 415s master flat frame (Tag = MASTER_FLAT_IFU_arm) - An order edges table 415s frame(Tag = ORDER_TAB_EDGES_IFU_arm) - [physmod] An AFC corrected 415s model cfg frame (Tag = XSH_MOD_CFG_OPT_AFC_arm) - [poly] An AFC 415s corrected model wavesol frame (Tag = WAVE_TAB_AFC_arm) - [OPTIONAL] 415s A non-linear badpixel map (Tag = BP_MAP_NL_arm) - [OPTIONAL] A 415s reference badpixel map (Tag = BP_MAP_RP_arm) Products : - Merged 3D 415s data cube (PREFIX_MERGE3D_DATA_OBJ_arm) - QC Traces of 3D data cube 415s (PREFIX_MERGE3D_TRACE_OBJ_arm) - Order by order 3D data cube 415s (PREFIX_ORDER3D_DATA_OBJ_arm) - Order by order 3D qual cube 415s (IFU_CFG_COR_arm) - Order by order 3D qual cube 415s (PREFIX_MERGE3D_DATA_SKY_arm) - where PREFIX is SCI, FLUX, TELL if 415s input raw DPR.TYPE contains OBJECT or FLUX or TELLURIC 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 8: 415s pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: calibration 415s file defect, 256: hot pixel, 512: dark 415s pixel, 4096: A/D converted saturation, 415s 32768: non linear pixel, 1048576: 415s extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 1: 415s mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s crh-clip-kappa: Kappa value in sigma clipping during CRH 415s rejection using multiple frames (float; 415s default: 5.0) 415s crh-clip-niter: Number of iterations in sigma clipping 415s during CRH rejection using multiple frames 415s (int; default: 5) 415s crh-clip-frac: Minimal ratio of points accepted / total in 415s sigma clipping during CRH rejection using 415s multiple frames (float; default: 0.7) 415s background-edges-margin: X margin to order edge to define background 415s sampling points (int; default: 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; default: 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; default: 9) 415s background-poly-kappa: Poly mode kappa value of kappa-sigma-clip 415s outliers removal. (float; default: 10.0) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s compute-map: if TRUE recompute (wave and slit) maps from 415s the dispersion solution. If sky-subtract is 415s set to TRUE this must be set to TRUE. (bool; 415s default: False) 415s trace-obj: if TRUE trace object position on each IFU 415s slice. In this case order TAB edges is 415s required (bool; default: False) 415s check-afc: Input AFC corrected model/wave solution and 415s science frame check. If TRUE the recipe 415s verify that the input mode/wave solution is 415s AFC corrected, its INS.OPTIi.NAME is 415s 'Pin_0.5 ', and its OBS.ID and OBS.TARG.NAME 415s values matches with the corresponding values 415s of the science frame. (bool; default: True) 415s cut-uvb-spectrum: TRUE if recipe cuts the UVB spectrum at 556 415s nm (dichroich) (bool; default: True) 415s Author: A.Modigliani, J.Vernet, P. Bristow 415s 415s 415s Recipe xsh_scired_ifu_stare_drl: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'crh-clip-kappa': 5.0, 'crh-clip-niter': 5, 'crh-clip-frac': 0.7, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0, 'removecrhsingle-sigmalim': 5.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': 0.06, 'rectify-bin-slit': 0.21, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'extract-method': 'LOCALIZATION', 'stdextract-interp-hsize': 30, 'shift-offsettab-low': 0.0, 'shift-offsettab-up': 0.0, 'compute-map': True, 'check-afc': True, 'flat-method': 'master'} 415s Docstring: Reduce science exposure in IFU configuration and stare mode 415s 415s This recipe reduces science exposure in IFU configuration and stare 415s mode Input Frames : - A set of n Science frames ( n == 1 or >=3, 415s Tag = OBJECT_IFU_STARE_arm or STD_TELL_IFU_STARE_arm or 415s STD_FLUX_IFU_STARE_arm) - A spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - [UVB,VIS] A master bias frame (Tag = 415s MASTER_BIAS_arm) - [OPTIONAL]A master dark frame (Tag = 415s MASTER_DARK_arm) - A master flat frame (Tag = MASTER_FLAT_IFU_arm) 415s - An AFC corrected order table frame (Tag = ORDER_TAB_AFC_IFU_arm) - 415s [physmod] An AFC corrected model cfg frame (Tag = 415s XSH_MOD_CFG_OPT_AFC_arm) - [poly] An AFC corrected model wavesol 415s frame (Tag = WAVE_TAB_AFC_arm) - [OPTIONAL] An AFC corrected 415s dispersion solution frame (Tag = DISP_TAB_AFC_arm) - [OPTIONAL] A 415s slit map (Tag = SLIT_MAP_arm) - [OPTIONAL] A badpixel map (Tag = 415s BADPIXEL_MAP_arm) - [OPTIONAL] A mask of telluric lines (Tag = 415s TELL_MASK_arm) Products : - 3 Spectrum order tables 2D (1 per 415s slitlet), PRO.CATG=ORDER2D_slitlet_IFU_arm - 3 Spectrum merge tables 415s 2D (1 per slitlet), PRO.CATG=MERGE2D_slitlet_IFU_arm - 1 Spectrum 415s merge 3D, PRO.CATG=MERGE3D_IFU_arm 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s crh-clip-kappa: Kappa value in sigma clipping during CRH 415s rejection using multiple frames (float; 415s default: 5.0) 415s crh-clip-niter: Number of iterations in sigma clipping 415s during CRH rejection using multiple frames 415s (int; default: 5) 415s crh-clip-frac: Minimal ratio of points accepted / total in 415s sigma clipping during CRH rejection using 415s multiple frames (float; default: 0.7) 415s background-edges-margin: X margin to order edge to define background 415s sampling points (int; default: 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; default: 415s 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; default: 415s 9) 415s background-poly-kappa: Poly mode kappa value of kappa-sigma-clip 415s outliers removal. (float; default: 10.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 5.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: 0.06) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: 0.21) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s extract-method: Method used for extraction (LOCALIZATION, 415s NOD) (str; default: 'LOCALIZATION') 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s shift-offsettab-low: Global shift of the lower slitlet slit 415s positions, relative to the central 415s one[arcsec]. (float; default: 0.0) 415s shift-offsettab-up: Global shift of the upper slitlet slit 415s positions, relative to the central 415s one[arcsec]. (float; default: 0.0) 415s compute-map: if TRUE recompute (wave and slit) maps from 415s the dispersion solution. If sky-subtract is 415s set to TRUE this must be set to TRUE. 415s (bool; default: True) 415s check-afc: Input AFC corrected model/wave solution and 415s science frame check.If TRUE the recipe 415s verify that the input mode/wave solution is 415s AFC corrected, its INS.OPTIi.NAME is 415s 'Pin_0.5 ', and its OBS.ID and 415s OBS.TARG.NAME values matches with the 415s corresponding values of the science frame. 415s (bool; default: True) 415s flat-method: method adopted for flat: (str; default: 415s 'master') 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer 415s 415s 415s Recipe xsh_scired_slit_nod: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 1741684735, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'removecrhsingle-sigmalim': 20.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'rectify-fast': True, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'localize-nod-throw': 0.0, 'extract-method': 'NOD', 'stdextract-interp-hsize': 30, 'combinenod-throwlist': 'throwlist.asc', 'combinenod-method': 'MEAN', 'max-slit': 5.7, 'min-slit': -5.3, 'correct-sky-by-median': True, 'cut-uvb-spectrum': True, 'generate-SDP-format': False, 'dummy-association-keys': 0, 'scale-combine-nod-method': 1} 415s Docstring: Reduce science frames in SLIT configuration and nod mode 415s 415s This recipe reduces science exposure in SLIT configuration and NOD 415s mode Input Frames : - A set of n Science frames ( n even ), Tag = 415s OBJECT_SLIT_NOD_arm - Spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - [UVB,VIS] A master bias frame (Tag = 415s MASTER_BIAS_arm) - A master flat frame (Tag = MASTER_FLAT_SLIT_arm) 415s - An order table frame(Tag = ORDER_TABLE_EDGES_SLIT_arm) - [poly 415s mode] A wave solution frame(Tag = WAVE_TAB_2D_arm) - [poly mode] A 415s wave map frame(Tag = WAVE_MAP_arm) - [poly mode] A disp table 415s frame(Tag = DISP_TAB_arm) - [physical model mode]A model cfg table 415s (Format = TABLE, Tag = XSH_MOD_CFG_TAB_arm) - [OPTIONAL] A non- 415s linear badpixel map (Tag = BP_MAP_NL_arm) - [OPTIONAL] A reference 415s badpixel map (Tag = BP_MAP_RP_arm) - [OPTIONAL] The instrument 415s response table (Tag = RESPONSE_MERGE1D_SLIT_arm) - [OPTIONAL] An 415s atmospheric extinction table (Tag = ATMOS_EXT_arm) - [OPTIONAL] A 415s telluric mask (Tag = TELL_MASK_arm) - [OPTIONAL] The instrument 415s master response table (Tag = MRESPONSE_MERGE1D_SLIT_arm). If both 415s master and individual response are provided the individual response is 415s preferred. Products : - PREFIX_ORDER2D_arm (2 dimension) - 415s PREFIX_ORDER1D_arm (1 dimension) - PREFIX_MERGE2D_arm (2 dimension) 415s - PREFIX_MERGE1D_arm (1 dimension) - PREFIX_WAVE_MAP_arm, wave map 415s image - PREFIX_SLIT_MAP_arm, slit map image - [OPTIONAL, if 415s response and atm ext are provided] PREFIX_FLUX_ORDER2D_arm (2 415s dimension) - [OPTIONAL, if response and atm ext are provided] 415s PREFIX_FLUX_ORDER1D_arm (1 dimension) - [OPTIONAL, if response and 415s atm ext are provided] PREFIX_FLUX_MERGE2D_arm (2 dimension) - 415s [OPTIONAL, if response and atm ext are provided] 415s PREFIX_FLUX_MERGE1D_arm (1 dimension) - where PREFIX is SCI, FLUX, 415s TELL if input raw DPR.TYPE contains OBJECT or FLUX or TELLURIC 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 1741684735) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 20.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s rectify-fast: Fast if TRUE (Rect[B-A] = -Rect[A-B]), in 415s that case only entire pixel shifts are 415s applied. (bool; default: True) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec]. It refers to the 415s object position in the first frame of the 415s nodding sequence (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s localize-nod-throw: Step (arcsec) between A and B images in 415s nodding mode. (float; default: 0.0) 415s extract-method: Method used for extraction (LOCALIZATION, 415s NOD) (str; default: 'NOD') 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s combinenod-throwlist: Name of ascii file containing the list of 415s throw shifts with respect to the first 415s exposure (str; default: 'throwlist.asc') 415s combinenod-method: Combination method for nodded frames 415s (MEDIAN, MEAN) (str; default: 'MEAN') 415s max-slit: Lower Slit Limit (localize and extract 415s (float; default: 5.7) 415s min-slit: Upper Slit Limit (localize and extract 415s (float; default: -5.3) 415s correct-sky-by-median: TRUE if the resampled spectrum at each 415s wavelength is median subtracted to remove 415s sky lines (bool; default: True) 415s cut-uvb-spectrum: TRUE if recipe cuts the UVB spectrum at 556 415s nm (dichroich) (bool; default: True) 415s generate-SDP-format: TRUE if additional files should be 415s generated in Science Data Product (SDP) 415s format. (bool; default: False) 415s dummy-association-keys: Sets the number of dummy (empty) ASSONi, 415s ASSOCi and ASSOMi keywords to create. (int; 415s default: 0) 415s scale-combine-nod-method: frame scaling when nod frames are combined: 415s 0 (no-scaling); 1 (scaling) (int; default: 415s 1) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich A. Modigliani 415s 415s 415s Recipe xsh_scired_slit_offset: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'removecrhsingle-sigmalim': 20.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'stdextract-interp-hsize': 30, 'combinenod-method': 'MEAN', 'gen-sky': True, 'cut-uvb-spectrum': True, 'generate-SDP-format': False, 'dummy-association-keys': 0} 415s Docstring: Reduce science exposure in SLIT configuration and on/off mode 415s 415s This recipe reduces science exposure in SLIT configuration and on/off 415s mode Input Frames : - A set of n Science frames ( n even ), 415s Tag = STD_FLUX_SLIT_OFFSET_arm, SKY_SLIT_arm - Spectral format table 415s (Tag = SPECTRAL_FORMAT_TAB_arm) - A master flat frame (Tag = 415s MASTER_FLAT_SLIT_arm) - An order table frame(Tag = 415s ORDER_TABLE_EDGES_SLIT_arm) - A wavelength calibration solution 415s frame(Tag = WAVE_TAB_2D_arm) - [OPTIONAL] Table with dispersion 415s coefficients (Tag = DISP_TAB_arm) It is required if -rectify- 415s conserve-flux=TRUE - [OPTIONAL] A non-linear badpixel map (Tag = 415s BP_MAP_NL_arm) - [OPTIONAL] A reference badpixel map (Tag = 415s BP_MAP_RP_arm) - [OPTIONAL] The instrument response table (Tag = 415s RESPONSE_MERGE1D_SLIT_arm) - [OPTIONAL] An atmospheric extinction 415s table (Tag = ATMOS_EXT_arm) - [OPTIONAL] A telluric mask (Tag = 415s TELL_MASK_arm) - [OPTIONAL] The instrument master response table 415s (Tag = MRESPONSE_MERGE1D_SLIT_arm). If both master and individual 415s response are provided the individual response is preferred. Products : 415s - PREFIX_ORDER2D_arm extracted spectrum, order-by-order, 2D - 415s PREFIX_ORDER1D_arm extracted spectrum, order-by-order, 1D - 415s PREFIX_MERGE2D_arm merged spectrum, 2D - PREFIX_MERGE1D_arm merged 415s spectrum, 1D - PREFIX_SKY_arm, 2D sky frame - 415s SKY_SLIT_ORDER2D_arm, 2D sky image (order-by-order) - 415s SKY_SLIT_MERGE2D_arm, 2D sky image (merged) - PREFIX_WAVE_MAP_arm, 415s wave map image - PREFIX_SLIT_MAP_arm, slit map image - where PREFIX 415s is SCI, FLUX, TELL if input raw DPR.TYPE contains OBJECT or FLUX or 415s TELLURIC - [OPTIONAL, if response and atm ext are provided] 415s PREFIX_FLUX_ORDER2D_arm (2 dimension) - [OPTIONAL, if response and 415s atm ext are provided] PREFIX_FLUX_ORDER1D_arm (1 dimension) - 415s [OPTIONAL, if response and atm ext are provided] 415s PREFIX_FLUX_MERGE2D_arm (2 dimension) - [OPTIONAL, if response and 415s atm ext are provided] PREFIX_FLUX_MERGE1D_arm (1 dimension) 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray removed, 415s 32: cosmic-ray unremoved, 128: 415s calibration file defect, 256: hot pixel, 415s 512: dark pixel, 4096: A/D converted 415s saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean prescan 415s correction 3: (mean pre+mean overscan)/2 415s correction (int; default: 1) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 20.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) (float; 415s default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum [nm] 415s (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s combinenod-method: Combination method for nodded frames 415s (MEDIAN, MEAN) (str; default: 'MEAN') 415s gen-sky: if TRUE a 2D sky frame, a 2D rectified, a 415s 2D merged sky are generated (bool; default: 415s True) 415s cut-uvb-spectrum: TRUE if recipe cuts the UVB spectrum at 556 415s nm (dichroich) (bool; default: True) 415s generate-SDP-format: TRUE if additional files should be 415s generated in Science Data Product (SDP) 415s format. (bool; default: False) 415s dummy-association-keys: Sets the number of dummy (empty) ASSONi, 415s ASSOCi and ASSOMi keywords to create. (int; 415s default: 0) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_scired_slit_stare: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'stack-method': 'median', 'klow': 5.0, 'khigh': 5.0, 'background-edges-margin': 1, 'background-poly-deg-y': 9, 'background-poly-deg-x': 9, 'background-poly-kappa': 10.0, 'removecrhsingle-sigmalim': 20.0, 'removecrhsingle-flim': 2.0, 'removecrhsingle-niter': 4, 'rectify-kernel': 'tanh', 'rectify-radius': 2.0, 'rectify-bin-lambda': -1.0, 'rectify-bin-slit': -1.0, 'localize-method': 'MANUAL', 'localize-chunk-nb': 10, 'localize-thresh': 0.1, 'localize-deg-lambda': 0, 'localize-slit-position': 0.0, 'localize-slit-hheight': 2.0, 'localize-kappa': 3.0, 'localize-niter': 3, 'localize-use-skymask': False, 'sky-subtract': True, 'sky-bspline-nbkpts-first': 3000, 'sky-bspline-nbkpts-second': 3000, 'sky-bspline-order': 7, 'sky-bspline-niter': 20, 'sky-bspline-kappa': 5.0, 'sky-method': 'MEDIAN', 'bspline-sampling': 'FINE', 'sky-median-hsize': 20, 'sky-slit-edges-mask': 0.5, 'sky-position1': 0.0, 'sky-hheight1': 0.0, 'sky-position2': 0.0, 'sky-hheight2': 0.0, 'stdextract-interp-hsize': 30, 'do-optextract': False, 'optextract-oversample': 5, 'optextract-box-half-size': 10, 'optextract-chunk-size': 50, 'optextract-step-lambda': 0.02, 'optextract-clip-kappa': 3.0, 'optextract-clip-frac': 0.4, 'optextract-clip-niter': 2, 'optextract-niter': 1, 'optextract-method': 'GAUSSIAN', 'cut-uvb-spectrum': True, 'generate-SDP-format': False, 'dummy-association-keys': 0} 415s Docstring: Reduce science exposure in SLIT configuration and stare mode 415s 415s This recipe reduces science exposure in SLIT configuration and stare 415s mode Input Frames : - A set of n Science frames ( n == 1 or >=3, 415s Tag = OBJECT_SLIT_STARE_UVB) - A spectral format table (Tag = 415s SPECTRAL_FORMAT_TAB_arm) - [UVB,VIS] A master bias frame (Tag = 415s MASTER_BIAS_arm) - [OPTIONAL]A master dark frame (Tag = 415s MASTER_DARK_arm) - A master flat frame (Tag = MASTER_FLAT_SLIT_arm) 415s - An order table frame(Tag = ORDER_TAB_EDGES_SLIT_arm) - [OPTIONAL] 415s A table with dispersion coefficients (Tag = DISP_TAB_arm, required 415s in poly mode - [poly mode] A wave solution frame(Tag = 415s WAVE_TAB_2D_arm) - [physical model mode] A model cfg table (Format = 415s TABLE, Tag = XSH_MOD_CFG_TAB_arm) - [OPTIONAL] A table specifying 415s multiplying factor for break points (Tag = SKY_SUB_BKPTS_arm) to 415s generate - [OPTIONAL] A non-linear badpixel map (Tag = 415s BP_MAP_NL_arm) - [OPTIONAL] A reference badpixel map (Tag = 415s BP_MAP_RP_arm) - [OPTIONAL,physmod mode] A table listing sky line 415s positions (Tag = SKY_LINE_LIST_arm) this is used to be able to 415s control quality of sky subtraction, for example projecting guess 415s positions on the product SCI_SLIT_STARE_SUB_SKY_arm and is 415s required if sky-method=BSPLINE - [OPTIONAL] The instrument response 415s table (Tag = RESPONSE_MERGE1D_SLIT_arm) - [OPTIONAL] An atmospheric 415s extinction table (Tag = ATMOS_EXT_arm) - [OPTIONAL] A telluric mask 415s (Tag = TELL_MASK_arm) - [OPTIONAL] The instrument master response 415s table (Tag = MRESPONSE_MERGE1D_SLIT_arm). If both master and 415s individual response are provided the individual response is preferred. 415s Products : - PREFIX_ORDER2D_arm extracted spectrum, order-by-order, 415s 2D - PREFIX_ORDER1D_arm extracted spectrum, order-by-order, 1D - 415s PREFIX_MERGE2D_arm merged spectrum, 2D - PREFIX_MERGE1D_arm merged 415s spectrum, 1D - SKY_SLIT_MERGE2D_arm merged spectrum sky, 2D - 415s PREFIX_SUB_BACK_SLIT_arm sci frame bias, (dark), inter-order bkg 415s subtracted - PREFIX_WAVE_MAP_arm, wave map image - 415s PREFIX_SLIT_MAP_arm, slit map image - PREFIX_DIVFF_arm as 415s PREFIX_SUB_BACK_SLIT_arm, flat fielded - PREFIX_SUB_SKY_arm, as 415s PREFIX_DIVFF_arm, sky subtracted - PREFIX_SKY_arm, 2D sky frame - 415s PREFIX_SKY_ORD1D_arm, 1D sky image (order-by-order) - 415s PREFIX_BACK_SLIT_arm, inter order background image - where PREFIX 415s is SCI, FLUX, TELL if input raw DPR.TYPE contains OBJECT or FLUX or 415s TELLURIC - [OPTIONAL, if response and atm ext are provided] 415s PREFIX_FLUX_ORDER2D_arm (2 dimension) - [OPTIONAL, if response and 415s atm ext are provided] PREFIX_FLUX_ORDER1D_arm (1 dimension) - 415s [OPTIONAL, if response and atm ext are provided] 415s PREFIX_FLUX_MERGE2D_arm (2 dimension) - [OPTIONAL, if response and 415s atm ext are provided] PREFIX_FLUX_MERGE1D_arm (1 dimension) - 415s PREFIX_ON_arm bias (dark) subtracted sci frame 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. 415s (str; default: 'no') 415s debug-level: Additional xshooter debug level. One of 415s 'none', 'low', 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel 415s mask pixel values. Most frequent codes 415s relevant for the user: 0: good pixel, 415s 8: pick-up noise, 16: cosmic-ray 415s removed, 32: cosmic-ray unremoved, 415s 128: calibration file defect, 256: hot 415s pixel, 512: dark pixel, 4096: A/D 415s converted saturation, 32768: non linear 415s pixel, 1048576: extrapolated flux in 415s NIR, 4194304: Interpolated flux during 415s extraction. (int; default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: no correction 415s 1: mean overscan correction 2: mean 415s prescan correction 3: (mean pre+mean 415s overscan)/2 correction (int; default: 1) 415s stack-method: Method used to build master frame. (str; 415s default: 'median') 415s klow: Kappa used to clip low level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s khigh: Kappa used to clip high level values, when 415s method is set to 'mean' (float; default: 415s 5.0) 415s background-edges-margin: X margin to order edge to define 415s background sampling points (int; default: 415s 1) 415s background-poly-deg-y: Poly mode fit deg along Y. (int; default: 415s 9) 415s background-poly-deg-x: Poly mode fit deg along X. (int; default: 415s 9) 415s background-poly-kappa: Poly mode kappa value of kappa-sigma-clip 415s outliers removal. (float; default: 10.0) 415s removecrhsingle-sigmalim: Poisson fluctuation threshold to flag CRHs 415s (see van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 20.0) 415s removecrhsingle-flim: Minimum contrast between the Laplacian 415s image and the fine structure image that a 415s point must have to be flagged as CRH. (see 415s van Dokkum, PASP,113,2001,p1420-27) 415s (float; default: 2.0) 415s removecrhsingle-niter: Max number of iterations (int; default: 4) 415s rectify-kernel: Name of the Interpolation Kernel Used. 415s Possible values are: tanh, sinc, sinc2, 415s lanczos, hamming, hann. (str; default: 415s 'tanh') 415s rectify-radius: Rectify Interpolation radius [bin units]. 415s (float; default: 2.0) 415s rectify-bin-lambda: Wavelength step in the output spectrum 415s [nm] (float; default: -1.0) 415s rectify-bin-slit: Spatial step along the slit in the output 415s spectrum [arcsec] (float; default: -1.0) 415s localize-method: Localization method (MANUAL, MAXIMUM, 415s GAUSSIAN) used to detect the object 415s centroid and height on the slit (str; 415s default: 'MANUAL') 415s localize-chunk-nb: Number of chunks in the full spectrum to 415s localize the object (int; default: 10) 415s localize-thresh: Threshold relative to the peak intensity 415s below which the edges of the object are 415s detected for MAXIMUM localization (float; 415s default: 0.1) 415s localize-deg-lambda: Degree in lambda in the localization 415s polynomial expression slit=f(lambda), used 415s only for MAXIMUM and GAUSSIAN (int; 415s default: 0) 415s localize-slit-position: Object position on the slit for MANUAL 415s localization [arcsec] (float; default: 415s 0.0) 415s localize-slit-hheight: Object half height on the slit for MANUAL 415s localization [arcsec] (float; default: 415s 2.0) 415s localize-kappa: Kappa value for sigma clipping in the 415s localization polynomial fit (float; 415s default: 3.0) 415s localize-niter: Number of iterations for sigma clipping in 415s the localization polynomial fit (int; 415s default: 3) 415s localize-use-skymask: TRUE if we want to mask sky lines using 415s SKY_LINE_LIST file. (bool; default: False) 415s sky-subtract: TRUE to use subtract sky single. (bool; 415s default: True) 415s sky-bspline-nbkpts-first: Nb of break points for Bezier curve 415s fitting (without localization) (int; 415s default: 3000) 415s sky-bspline-nbkpts-second: Nb of break points for Bezier curve 415s fitting (with localization) (int; default: 415s 3000) 415s sky-bspline-order: Bezier spline order (int; default: 7) 415s sky-bspline-niter: Nb of iterations (int; default: 20) 415s sky-bspline-kappa: Kappa value used to kappa-sigma-clip 415s object (float; default: 5.0) 415s sky-method: Sky subtract Method (BSPLINE, BSPLINE1, 415s BSPLINE2 MEDIAN). BSPLINE is equivalent to 415s BSPLINE1 (str; default: 'MEDIAN') 415s bspline-sampling: BSPLINE sampling. UNIFORM-uses the user 415s defined nbkpts value, corrected for 415s binning, for all orders. FINE: multiplies 415s the user defined nbkpts value, corrected 415s for binning, by a hard coded coefficient 415s optimized on each arm-order) (str; 415s default: 'FINE') 415s sky-median-hsize: Half size of the running median. If sky- 415s method=MEDIAN . (int; default: 20) 415s sky-slit-edges-mask: Size of edges mask in arcsec (float; 415s default: 0.5) 415s sky-position1: Central position of the sky window #1 415s [arcsec] (float; default: 0.0) 415s sky-hheight1: Half size of sky window #1 [arcsec] 415s (float; default: 0.0) 415s sky-position2: Central position of the sky window #2 415s [arcsec] (float; default: 0.0) 415s sky-hheight2: Half size of the sky window #2 [arcsec] 415s (float; default: 0.0) 415s stdextract-interp-hsize: Half size of mask used to define object 415s cross order profile (int; default: 30) 415s do-optextract: TRUE if we do the optimal extraction 415s (bool; default: False) 415s optextract-oversample: Oversample factor for the science image 415s (int; default: 5) 415s optextract-box-half-size: Extraction box [pixel] (int; default: 10) 415s optextract-chunk-size: Chunk size [bin] (int; default: 50) 415s optextract-step-lambda: Lambda step [nm] (float; default: 0.02) 415s optextract-clip-kappa: Kappa for cosmics ray hits rejection 415s (float; default: 3.0) 415s optextract-clip-frac: Maximum bad pixels fraction for cosmics 415s ray hits rejection (float; default: 0.4) 415s optextract-clip-niter: Maximum number of iterations for cosmics 415s ray hits rejection (int; default: 2) 415s optextract-niter: Number of iterations (int; default: 1) 415s optextract-method: Extraction method GAUSSIAN | GENERAL (str; 415s default: 'GAUSSIAN') 415s cut-uvb-spectrum: TRUE if recipe cuts the UVB spectrum at 415s 556 nm (dichroich) (bool; default: True) 415s generate-SDP-format: TRUE if additional files should be 415s generated in Science Data Product (SDP) 415s format. (bool; default: False) 415s dummy-association-keys: Sets the number of dummy (empty) ASSONi, 415s ASSOCi and ASSOMi keywords to create. 415s (int; default: 0) 415s Author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani 415s 415s 415s Recipe xsh_util_physmod: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'binx': 1, 'biny': 1, 'spectral-format-tab': False, 'wavemap': False} 415s Docstring: Generate physical model products 415s 415s This recipe generates the theoretical and the spectral format tables. 415s and possibly the model based wave map. The sof file contains the names 415s of the input FITS file tagged with XSH_MOD_CFG_TAB_arm. tagged with 415s ARC_LINE_LIST_arm. This recipe has the following products: Model order 415s traces for nine pinholes (PRO CATG = THEO_TAB_MULT_arm) Model order 415s traces for nine pinholes (PRO CATG = THEO_TAB_IFU_arm) Model order 415s traces for central pinhole (PRO CATG = THEO_TAB_SING_arm) Spectral 415s format table (PRO CATG = SPECTRAL_FORMAT_TAB_arm) Wave map image (PRO 415s CATG = WAVE_MAP_arm) Slit map image (PRO CATG = SLIT_MAP_arm) 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are deleted. (str; 415s default: 'no') 415s debug-level: Additional xshooter debug level. One of 'none', 415s 'low', 'medium', 'high' (str; default: 'none') 415s time-stamp: Add timestamp to product file name. (bool; 415s default: False) 415s decode-bp: Integer representation of the bits to be 415s considered bad when decoding the bad pixel mask 415s pixel values. Most frequent codes relevant for 415s the user: 0: good pixel, 8: pick-up noise, 415s 16: cosmic-ray removed, 32: cosmic-ray 415s unremoved, 128: calibration file defect, 256: 415s hot pixel, 512: dark pixel, 4096: A/D 415s converted saturation, 32768: non linear pixel, 415s 1048576: extrapolated flux in NIR, 4194304: 415s Interpolated flux during extraction. (int; 415s default: 2144337919) 415s binx: X binning (int; default: 1) 415s biny: X binning (int; default: 1) 415s spectral-format-tab: Generate spectral format table (bool; default: 415s False) 415s wavemap: Generate slit and wave maps (time consuming) 415s (bool; default: False) 415s Author: Andrea Modigliani 415s 415s 415s Recipe xsh_wavecal: 415s version 3.5.3 415s Parameters: {'keep-temp': 'no', 'debug-level': 'none', 'time-stamp': False, 'decode-bp': 2144337919, 'pre-overscan-corr': 1, 'followarclines-search-window-half-size': 13, 'followarclines-order-edges-mask': 3, 'followarclines-min-sn': -1.0, 'tilt-clip-kappa': 2.5, 'tilt-clip-niter': 5, 'tilt-clip-frac': 0.7, 'specres-clip-kappa': 2.5, 'specres-clip-niter': 5, 'specres-clip-frac': 0.7} 415s Docstring: Compute arclines tilt and instrument resolution 415s 415s This recipe detects and follow arc lines in a fully illuminated slit 415s frame. Input Frames: Raw frame (Tag = ARC_SLIT_arm) Arc Line List 415s (Tag = ARC_LINE_LIST_arm) Master Bias (Tag = MASTER_BIAS_arm) 415s [OPTIONAL] Master Dark (Tag = MASTER_DARK_arm) Order Table (Tag = 415s ORDER_TABLE_EDGES_arm) [poly mode] Wave Solution (Tag = 415s WAVE_TAB_2D_arm) [poly mode] Theoretical Map (Tag = 415s THEO_TAB_spec_arm, spec=SING/IFU) [physical model mode] Model cfg 415s tab (Tag = XSH_MOD_CFG_TAB_arm) - [OPTIONAL] A non-linear badpixel 415s map (Tag = BP_MAP_NL_arm) - [OPTIONAL] A reference badpixel map (Tag 415s = BP_MAP_RP_arm) [OPTIONAL-To compute spectral resolution] 415s Dispersion Table Frame (Tag = DISP_TAB_arm) Prepare PRE structures. 415s Subtract the master Dark (UVB, VIS and NIR) Substract the master Bias 415s (UVB and VIS) Divide by Flat. Detect and follow arc lines. Products: 415s Wavelength solution, PRO.CATG = WAVE_TAB_ARC_SLIT_arm [if poly mode] 415s Linetilt list, PRO.CATG = TILT_TAB_SLIT_arm Residuals table, 415s PRO.CATG = RESID_TAB_GOOD_LINES_arm Wave Map, PRO.CATG = 415s WAVE_MAP_arm [if model-wavemap-compute=TRUE] In case of IFU mode 415s cdata previous producs repat for each IFU slices Arc frame, Bias 415s subtracted in PRE format, PRO.CATG = ARC_BIAS_SUBTRACT_arm If 415s arm=UVB/VIS and PRO.CATG=ARC_NIR_ON if arm=NIR Arc frame, Bias 415s subtracted, FLAT-FIELDED, PRO.CATG = WAVECAL_FLATFIELDED_arm 415s 415s Parameters: 415s keep-temp: If 'no', temporary files are 415s deleted. (str; default: 'no') 415s debug-level: Additional xshooter debug 415s level. One of 'none', 'low', 415s 'medium', 'high' (str; 415s default: 'none') 415s time-stamp: Add timestamp to product file 415s name. (bool; default: False) 415s decode-bp: Integer representation of the 415s bits to be considered bad 415s when decoding the bad pixel 415s mask pixel values. Most 415s frequent codes relevant for 415s the user: 0: good pixel, 415s 8: pick-up noise, 16: 415s cosmic-ray removed, 32: 415s cosmic-ray unremoved, 128: 415s calibration file defect, 256: 415s hot pixel, 512: dark pixel, 415s 4096: A/D converted 415s saturation, 32768: non linear 415s pixel, 1048576: 415s extrapolated flux in NIR, 415s 4194304: Interpolated flux 415s during extraction. (int; 415s default: 2144337919) 415s pre-overscan-corr: pre-overscan correction. 0: 415s no correction 1: mean 415s overscan correction 2: mean 415s prescan correction 3: (mean 415s pre+mean overscan)/2 415s correction (int; default: 1) 415s followarclines-search-window-half-size: Half window size (HWS) in 415s pixels (Y axis) of search 415s window for each line. (int; 415s default: 13) 415s followarclines-order-edges-mask: Nb of pixels suppressed (X) 415s from edges of search window. 415s (int; default: 3) 415s followarclines-min-sn: Minimum Signal over Noise 415s ratio at center to keep the 415s line (6 for IFU, 15 for 415s SLIT). (float; default: -1.0) 415s tilt-clip-kappa: Multiple of sigma in sigma 415s clipping for evaluate tilt 415s (float; default: 2.5) 415s tilt-clip-niter: Number of iterations in sigma 415s clipping for evaluate tilt 415s (int; default: 5) 415s tilt-clip-frac: Minimal fractions of points 415s accepted / total in sigma 415s clipping for evaluate tilt 415s (float; default: 0.7) 415s specres-clip-kappa: Multiple of sigma in sigma 415s clipping for evaluate 415s spectral resolution (float; 415s default: 2.5) 415s specres-clip-niter: Number of iterations in sigma 415s clipping for evaluate 415s spectral resolution (int; 415s default: 5) 415s specres-clip-frac: Minimal fractions of points 415s accepted / total in sigma 415s clipping for evaluate 415s spectral resolution (float; 415s default: 0.7) 415s Author: L.Guglielmi 415s 415s 416s autopkgtest [01:30:23]: test test-recipe.py: -----------------------] 420s test-recipe.py PASS (superficial) 420s autopkgtest [01:30:27]: test test-recipe.py: - - - - - - - - - - results - - - - - - - - - - 424s autopkgtest [01:30:31]: @@@@@@@@@@@@@@@@@@@@ summary 424s test-recipe.py PASS (superficial)