0s autopkgtest [01:04:47]: starting date and time: 2024-04-19 01:04:47+0000 0s autopkgtest [01:04:47]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline 0s autopkgtest [01:04:47]: host juju-7f2275-prod-proposed-migration-environment-4; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.tra1nfq1/out --timeout-copy=6000 --setup-commands 'dhclient || true; ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:gsl --apt-upgrade cpl-plugin-uves --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=gsl/2.7.1+dfsg-6ubuntu2 -- lxd -r lxd-armhf-10.44.124.113 lxd-armhf-10.44.124.113:autopkgtest/ubuntu/noble/armhf 43s autopkgtest [01:05:30]: testbed dpkg architecture: armhf 45s autopkgtest [01:05:32]: testbed apt version: 2.7.14build2 45s autopkgtest [01:05:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 48s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB] 48s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [54.2 kB] 48s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B] 48s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [376 kB] 48s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [82.2 kB] 49s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main armhf c-n-f Metadata [2492 B] 49s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted armhf Packages [976 B] 49s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted armhf c-n-f Metadata [116 B] 49s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [459 kB] 49s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf c-n-f Metadata [7776 B] 49s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse armhf c-n-f Metadata [116 B] 54s Fetched 1114 kB in 2s (582 kB/s) 54s Reading package lists... 72s RTNETLINK answers: Cannot assign requested address 72s RTNETLINK answers: Cannot assign requested address 72s RTNETLINK answers: File exists 72s Setting LLMNR support level "yes" for "12734", but the global support level is "no". 74s tee: /proc/self/fd/2: Permission denied 102s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 102s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 102s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 102s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 104s Reading package lists... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 106s Calculating upgrade... 107s The following packages were automatically installed and are no longer required: 107s linux-headers-6.8.0-20 linux-headers-6.8.0-20-generic 107s Use 'apt autoremove' to remove them. 107s The following packages will be REMOVED: 107s libevent-core-2.1-7 107s The following NEW packages will be installed: 107s libevent-core-2.1-7t64 linux-headers-6.8.0-22 linux-headers-6.8.0-22-generic 107s The following packages will be upgraded: 107s apport apport-core-dump-handler apport-symptoms base-passwd bash 107s bcache-tools bind9-dnsutils bind9-host bind9-libs bzip2 cloud-init coreutils 107s cpio cryptsetup-bin dbus dbus-bin dbus-daemon dbus-session-bus-common 107s dbus-system-bus-common dbus-user-session diffutils dirmngr dmidecode 107s dracut-install e2fsprogs eatmydata ethtool findutils ftp fwupd gcc-14-base 107s gettext-base gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client 107s gpg-wks-server gpgconf gpgsm gpgv grep gzip hdparm hostname htop iptables 107s iputils-ping iputils-tracepath keyboxd kmod kpartx krb5-locales libacl1 107s libargon2-1 libassuan0 libatasmart4 libattr1 libaudit-common libaudit1 107s libbytesize-common libbytesize1 libbz2-1.0 libcap2 libcap2-bin libcom-err2 107s libcrypt1 libcryptsetup12 libdb5.3t64 libdbus-1-3 libdrm-common libdrm2 107s libeatmydata1 libedit2 libelf1t64 libestr0 libevdev2 libext2fs2t64 107s libfastjson4 libffi8 libfido2-1 libflashrom1 libfribidi0 libfwupd2 libgcc-s1 107s libgcrypt20 libgmp10 libgpg-error-l10n libgpg-error0 libgssapi-krb5-2 107s libicu74 libidn2-0 libinih1 libip4tc2 libip6tc2 libjansson4 libjson-c5 107s libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblmdb0 107s liblz4-1 liblzo2-2 libmaxminddb0 libmd0 libmnl0 libmpfr6 libncurses6 107s libncursesw6 libnetfilter-conntrack3 libnfnetlink0 libnftables1 libnftnl11 107s libnghttp2-14 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 libnspr4 107s libnss3 libnuma1 libonig5 libp11-kit0 libpam-cap libpam-modules 107s libpam-modules-bin libpam-runtime libpam0g libpci3 libpcre2-8-0 107s libperl5.38t64 libpopt0 libpython3-stdlib libpython3.12-minimal 107s libpython3.12-stdlib libsasl2-2 libsasl2-modules libsasl2-modules-db 107s libsepol2 libsgutils2-1.46-2 libsigsegv2 libss2 libstdc++6 libtasn1-6 107s libtinfo6 libuchardet0 libunistring5 libutempter0 libwrap0 libx11-6 107s libx11-data libxau6 libxdmcp6 libxext6 libxkbcommon0 libxmlb2 libxtables12 107s libxxhash0 libyaml-0-2 libzstd1 linux-headers-generic login logrotate 107s logsave make man-db mawk multipath-tools nano ncurses-base ncurses-bin 107s ncurses-term netcat-openbsd nftables numactl openssh-client openssh-server 107s openssh-sftp-server passwd patch pci.ids pciutils perl perl-base 107s perl-modules-5.38 python-apt-common python3 python3-apport python3-apt 107s python3-cffi-backend python3-gdbm python3-gi python3-minimal 107s python3-netifaces python3-problem-report python3-systemd python3.12 107s python3.12-minimal rsync rsyslog screen sed sg3-utils sg3-utils-udev sudo 107s sysstat sysvinit-utils tar tcpdump time tmux tnftp tzdata ubuntu-pro-client 107s ubuntu-pro-client-l10n ufw usb.ids usbutils xauth xdg-user-dirs xkb-data 107s zstd 107s 224 upgraded, 3 newly installed, 1 to remove and 0 not upgraded. 107s Need to get 78.7 MB of archives. 107s After this operation, 91.1 MB of additional disk space will be used. 107s Get:1 http://ftpmaster.internal/ubuntu noble/main armhf bash armhf 5.2.21-2ubuntu4 [668 kB] 108s Get:2 http://ftpmaster.internal/ubuntu noble/main armhf coreutils armhf 9.4-3ubuntu6 [1280 kB] 112s Get:3 http://ftpmaster.internal/ubuntu noble/main armhf diffutils armhf 1:3.10-1build1 [167 kB] 113s Get:4 http://ftpmaster.internal/ubuntu noble/main armhf findutils armhf 4.9.0-5build1 [293 kB] 114s Get:5 http://ftpmaster.internal/ubuntu noble/main armhf grep armhf 3.11-4build1 [157 kB] 115s Get:6 http://ftpmaster.internal/ubuntu noble/main armhf gzip armhf 1.12-1ubuntu3 [95.8 kB] 115s Get:7 http://ftpmaster.internal/ubuntu noble/main armhf hostname armhf 3.23+nmu2ubuntu2 [10.4 kB] 115s Get:8 http://ftpmaster.internal/ubuntu noble/main armhf login armhf 1:4.13+dfsg1-4ubuntu3 [200 kB] 115s Get:9 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-bin armhf 6.4+20240113-1ubuntu2 [178 kB] 116s Get:10 http://ftpmaster.internal/ubuntu noble/main armhf libperl5.38t64 armhf 5.38.2-3.2build2 [4109 kB] 125s Get:11 http://ftpmaster.internal/ubuntu noble/main armhf perl armhf 5.38.2-3.2build2 [231 kB] 126s Get:12 http://ftpmaster.internal/ubuntu noble/main armhf perl-base armhf 5.38.2-3.2build2 [1671 kB] 129s Get:13 http://ftpmaster.internal/ubuntu noble/main armhf perl-modules-5.38 all 5.38.2-3.2build2 [3110 kB] 136s Get:14 http://ftpmaster.internal/ubuntu noble/main armhf bzip2 armhf 1.0.8-5.1 [33.5 kB] 136s Get:15 http://ftpmaster.internal/ubuntu noble/main armhf libbz2-1.0 armhf 1.0.8-5.1 [31.1 kB] 136s Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libcrypt1 armhf 1:4.4.36-4build1 [92.6 kB] 136s Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-7 [662 kB] 137s Get:18 http://ftpmaster.internal/ubuntu noble/main armhf sed armhf 4.9-2build1 [190 kB] 137s Get:19 http://ftpmaster.internal/ubuntu noble/main armhf tar armhf 1.35+dfsg-3build1 [236 kB] 138s Get:20 http://ftpmaster.internal/ubuntu noble/main armhf base-passwd armhf 3.6.3build1 [50.9 kB] 138s Get:21 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-base all 6.4+20240113-1ubuntu2 [25.5 kB] 138s Get:22 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-term all 6.4+20240113-1ubuntu2 [275 kB] 138s Get:23 http://ftpmaster.internal/ubuntu noble/main armhf sysvinit-utils armhf 3.08-6ubuntu3 [33.8 kB] 138s Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libncurses6 armhf 6.4+20240113-1ubuntu2 [88.1 kB] 138s Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libncursesw6 armhf 6.4+20240113-1ubuntu2 [119 kB] 138s Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libtinfo6 armhf 6.4+20240113-1ubuntu2 [90.8 kB] 138s Get:27 http://ftpmaster.internal/ubuntu noble/main armhf tmux armhf 3.4-1build1 [400 kB] 139s Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [82.6 kB] 139s Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libutempter0 armhf 1.2.1-3build1 [8862 B] 139s Get:30 http://ftpmaster.internal/ubuntu noble/main armhf libaudit-common all 1:3.1.2-2.1build1 [5736 B] 139s Get:31 http://ftpmaster.internal/ubuntu noble/main armhf libaudit1 armhf 1:3.1.2-2.1build1 [44.4 kB] 139s Get:32 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.3-5ubuntu5 [62.1 kB] 139s Get:33 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.3-5ubuntu5 [47.0 kB] 139s Get:34 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.3-5ubuntu5 [260 kB] 140s Get:35 http://ftpmaster.internal/ubuntu noble/main armhf logsave armhf 1.47.0-2.4~exp1ubuntu4 [22.0 kB] 140s Get:36 http://ftpmaster.internal/ubuntu noble/main armhf libext2fs2t64 armhf 1.47.0-2.4~exp1ubuntu4 [202 kB] 140s Get:37 http://ftpmaster.internal/ubuntu noble/main armhf e2fsprogs armhf 1.47.0-2.4~exp1ubuntu4 [571 kB] 141s Get:38 http://ftpmaster.internal/ubuntu noble/main armhf tzdata all 2024a-2ubuntu1 [273 kB] 141s Get:39 http://ftpmaster.internal/ubuntu noble/main armhf python3.12 armhf 3.12.3-1 [651 kB] 142s Get:40 http://ftpmaster.internal/ubuntu noble/main armhf gcc-14-base armhf 14-20240412-0ubuntu1 [47.6 kB] 142s Get:41 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 14-20240412-0ubuntu1 [41.5 kB] 142s Get:42 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 14-20240412-0ubuntu1 [714 kB] 143s Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libffi8 armhf 3.4.6-1build1 [21.2 kB] 143s Get:44 http://ftpmaster.internal/ubuntu noble/main armhf libpython3.12-stdlib armhf 3.12.3-1 [1925 kB] 146s Get:45 http://ftpmaster.internal/ubuntu noble/main armhf python3.12-minimal armhf 3.12.3-1 [2023 kB] 149s Get:46 http://ftpmaster.internal/ubuntu noble/main armhf libpython3.12-minimal armhf 3.12.3-1 [817 kB] 150s Get:47 http://ftpmaster.internal/ubuntu noble/main armhf python3-minimal armhf 3.12.3-0ubuntu1 [27.2 kB] 150s Get:48 http://ftpmaster.internal/ubuntu noble/main armhf python3 armhf 3.12.3-0ubuntu1 [24.1 kB] 150s Get:49 http://ftpmaster.internal/ubuntu noble/main armhf libpython3-stdlib armhf 3.12.3-0ubuntu1 [9896 B] 150s Get:50 http://ftpmaster.internal/ubuntu noble/main armhf libacl1 armhf 2.3.2-1build1 [15.1 kB] 150s Get:51 http://ftpmaster.internal/ubuntu noble/main armhf liblz4-1 armhf 1.9.4-1build1 [58.0 kB] 150s Get:52 http://ftpmaster.internal/ubuntu noble/main armhf libpopt0 armhf 1.19+dfsg-1build1 [25.0 kB] 150s Get:53 http://ftpmaster.internal/ubuntu noble/main armhf libxxhash0 armhf 0.8.2-2build1 [31.5 kB] 151s Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libzstd1 armhf 1.5.5+dfsg2-2build1 [265 kB] 151s Get:55 http://ftpmaster.internal/ubuntu noble/main armhf rsync armhf 3.2.7-1ubuntu1 [413 kB] 152s Get:56 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error-l10n all 1.47-3build2 [8064 B] 152s Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error0 armhf 1.47-3build2 [61.6 kB] 152s Get:58 http://ftpmaster.internal/ubuntu noble/main armhf libassuan0 armhf 2.5.6-1build1 [31.3 kB] 152s Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libgcrypt20 armhf 1.10.3-2build1 [454 kB] 153s Get:60 http://ftpmaster.internal/ubuntu noble/main armhf gpg-wks-client armhf 2.4.4-2ubuntu17 [87.5 kB] 153s Get:61 http://ftpmaster.internal/ubuntu noble/main armhf dirmngr armhf 2.4.4-2ubuntu17 [346 kB] 154s Get:62 http://ftpmaster.internal/ubuntu noble/main armhf gpgsm armhf 2.4.4-2ubuntu17 [241 kB] 154s Get:63 http://ftpmaster.internal/ubuntu noble/universe armhf gpg-wks-server armhf 2.4.4-2ubuntu17 [76.3 kB] 154s Get:64 http://ftpmaster.internal/ubuntu noble/main armhf gnupg-utils armhf 2.4.4-2ubuntu17 [158 kB] 154s Get:65 http://ftpmaster.internal/ubuntu noble/main armhf gpg-agent armhf 2.4.4-2ubuntu17 [235 kB] 155s Get:66 http://ftpmaster.internal/ubuntu noble/main armhf gpg armhf 2.4.4-2ubuntu17 [524 kB] 155s Get:67 http://ftpmaster.internal/ubuntu noble/main armhf gpgconf armhf 2.4.4-2ubuntu17 [115 kB] 155s Get:68 http://ftpmaster.internal/ubuntu noble/main armhf gnupg all 2.4.4-2ubuntu17 [359 kB] 156s Get:69 http://ftpmaster.internal/ubuntu noble/main armhf keyboxd armhf 2.4.4-2ubuntu17 [111 kB] 156s Get:70 http://ftpmaster.internal/ubuntu noble/main armhf gpgv armhf 2.4.4-2ubuntu17 [224 kB] 156s Get:71 http://ftpmaster.internal/ubuntu noble/main armhf python-apt-common all 2.7.7ubuntu1 [20.1 kB] 156s Get:72 http://ftpmaster.internal/ubuntu noble/main armhf python3-apt armhf 2.7.7ubuntu1 [162 kB] 156s Get:73 http://ftpmaster.internal/ubuntu noble/main armhf python3-problem-report all 2.28.1-0ubuntu1 [23.8 kB] 156s Get:74 http://ftpmaster.internal/ubuntu noble/main armhf python3-apport all 2.28.1-0ubuntu1 [92.1 kB] 156s Get:75 http://ftpmaster.internal/ubuntu noble/main armhf python3-gi armhf 3.48.2-1 [219 kB] 157s Get:76 http://ftpmaster.internal/ubuntu noble/main armhf apport-core-dump-handler all 2.28.1-0ubuntu1 [16.8 kB] 157s Get:77 http://ftpmaster.internal/ubuntu noble/main armhf apport all 2.28.1-0ubuntu1 [83.5 kB] 157s Get:78 http://ftpmaster.internal/ubuntu noble/main armhf passwd armhf 1:4.13+dfsg1-4ubuntu3 [817 kB] 157s Get:79 http://ftpmaster.internal/ubuntu noble/main armhf libedit2 armhf 3.1-20230828-1build1 [78.7 kB] 158s Get:80 http://ftpmaster.internal/ubuntu noble/main armhf libfido2-1 armhf 1.14.0-1build3 [75.8 kB] 158s Get:81 http://ftpmaster.internal/ubuntu noble/main armhf libgssapi-krb5-2 armhf 1.20.1-6ubuntu2 [119 kB] 158s Get:82 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5-3 armhf 1.20.1-6ubuntu2 [321 kB] 158s Get:83 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5support0 armhf 1.20.1-6ubuntu2 [31.4 kB] 158s Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libk5crypto3 armhf 1.20.1-6ubuntu2 [78.6 kB] 158s Get:85 http://ftpmaster.internal/ubuntu noble/main armhf libcom-err2 armhf 1.47.0-2.4~exp1ubuntu4 [21.9 kB] 158s Get:86 http://ftpmaster.internal/ubuntu noble/main armhf libkeyutils1 armhf 1.6.3-3build1 [8236 B] 158s Get:87 http://ftpmaster.internal/ubuntu noble/main armhf openssh-sftp-server armhf 1:9.6p1-3ubuntu13 [35.5 kB] 158s Get:88 http://ftpmaster.internal/ubuntu noble/main armhf openssh-server armhf 1:9.6p1-3ubuntu13 [504 kB] 159s Get:89 http://ftpmaster.internal/ubuntu noble/main armhf openssh-client armhf 1:9.6p1-3ubuntu13 [890 kB] 160s Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.3-5ubuntu5 [40.8 kB] 160s Get:91 http://ftpmaster.internal/ubuntu noble/main armhf libwrap0 armhf 7.6.q-33 [45.3 kB] 161s Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libattr1 armhf 1:2.5.2-1build1 [10.2 kB] 161s Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libcap2 armhf 1:2.66-5ubuntu2 [25.8 kB] 161s Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libgmp10 armhf 2:6.3.0+dfsg-2ubuntu6 [207 kB] 161s Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libmd0 armhf 1.1.0-2build1 [23.0 kB] 161s Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-8-0 armhf 10.42-4ubuntu2 [198 kB] 161s Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libsepol2 armhf 3.5-2build1 [263 kB] 161s Get:98 http://ftpmaster.internal/ubuntu noble/main armhf libunistring5 armhf 1.1-2build1 [513 kB] 162s Get:99 http://ftpmaster.internal/ubuntu noble/main armhf libidn2-0 armhf 2.3.7-2build1 [96.2 kB] 162s Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libp11-kit0 armhf 0.25.3-4ubuntu2 [258 kB] 162s Get:101 http://ftpmaster.internal/ubuntu noble/main armhf libtasn1-6 armhf 4.19.0-3build1 [37.2 kB] 163s Get:102 http://ftpmaster.internal/ubuntu noble/main armhf libss2 armhf 1.47.0-2.4~exp1ubuntu4 [14.7 kB] 163s Get:103 http://ftpmaster.internal/ubuntu noble/main armhf mawk armhf 1.3.4.20240123-1build1 [115 kB] 163s Get:104 http://ftpmaster.internal/ubuntu noble/main armhf dbus-system-bus-common all 1.14.10-4ubuntu4 [81.6 kB] 163s Get:105 http://ftpmaster.internal/ubuntu noble/main armhf dbus-session-bus-common all 1.14.10-4ubuntu4 [80.4 kB] 163s Get:106 http://ftpmaster.internal/ubuntu noble/main armhf dbus-user-session armhf 1.14.10-4ubuntu4 [9960 B] 163s Get:107 http://ftpmaster.internal/ubuntu noble/main armhf dbus-daemon armhf 1.14.10-4ubuntu4 [109 kB] 163s Get:108 http://ftpmaster.internal/ubuntu noble/main armhf dbus-bin armhf 1.14.10-4ubuntu4 [37.1 kB] 163s Get:109 http://ftpmaster.internal/ubuntu noble/main armhf dbus armhf 1.14.10-4ubuntu4 [28.1 kB] 163s Get:110 http://ftpmaster.internal/ubuntu noble/main armhf libdbus-1-3 armhf 1.14.10-4ubuntu4 [190 kB] 164s Get:111 http://ftpmaster.internal/ubuntu noble/main armhf libpam-cap armhf 1:2.66-5ubuntu2 [11.6 kB] 164s Get:112 http://ftpmaster.internal/ubuntu noble/main armhf libcap2-bin armhf 1:2.66-5ubuntu2 [32.3 kB] 164s Get:113 http://ftpmaster.internal/ubuntu noble/main armhf iputils-ping armhf 3:20240117-1build1 [43.1 kB] 164s Get:114 http://ftpmaster.internal/ubuntu noble/main armhf kmod armhf 31+20240202-2ubuntu6 [91.8 kB] 164s Get:115 http://ftpmaster.internal/ubuntu noble/main armhf libkmod2 armhf 31+20240202-2ubuntu6 [45.0 kB] 164s Get:116 http://ftpmaster.internal/ubuntu noble/main armhf krb5-locales all 1.20.1-6ubuntu2 [13.8 kB] 164s Get:117 http://ftpmaster.internal/ubuntu noble/main armhf libargon2-1 armhf 0~20190702+dfsg-4build1 [22.6 kB] 164s Get:118 http://ftpmaster.internal/ubuntu noble/main armhf libjson-c5 armhf 0.17-1build1 [31.3 kB] 164s Get:119 http://ftpmaster.internal/ubuntu noble/main armhf libcryptsetup12 armhf 2:2.7.0-1ubuntu4 [238 kB] 164s Get:120 http://ftpmaster.internal/ubuntu noble/main armhf libelf1t64 armhf 0.190-1.1build4 [49.9 kB] 164s Get:121 http://ftpmaster.internal/ubuntu noble/main armhf libestr0 armhf 0.1.11-1build1 [6770 B] 164s Get:122 http://ftpmaster.internal/ubuntu noble/main armhf libfastjson4 armhf 1.2304.0-1build1 [20.1 kB] 164s Get:123 http://ftpmaster.internal/ubuntu noble/main armhf libfribidi0 armhf 1.0.13-3build1 [23.9 kB] 164s Get:124 http://ftpmaster.internal/ubuntu noble/main armhf libicu74 armhf 74.2-1ubuntu3 [10.5 MB] 167s Get:125 http://ftpmaster.internal/ubuntu noble/main armhf libmnl0 armhf 1.0.5-2build1 [10.5 kB] 167s Get:126 http://ftpmaster.internal/ubuntu noble/main armhf iptables armhf 1.8.10-3ubuntu2 [338 kB] 167s Get:127 http://ftpmaster.internal/ubuntu noble/main armhf libip4tc2 armhf 1.8.10-3ubuntu2 [21.3 kB] 167s Get:128 http://ftpmaster.internal/ubuntu noble/main armhf libip6tc2 armhf 1.8.10-3ubuntu2 [21.7 kB] 167s Get:129 http://ftpmaster.internal/ubuntu noble/main armhf libnfnetlink0 armhf 1.0.2-2build1 [12.9 kB] 167s Get:130 http://ftpmaster.internal/ubuntu noble/main armhf libnetfilter-conntrack3 armhf 1.0.9-6build1 [37.5 kB] 167s Get:131 http://ftpmaster.internal/ubuntu noble/main armhf libnftnl11 armhf 1.2.6-2build1 [52.5 kB] 167s Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libxtables12 armhf 1.8.10-3ubuntu2 [32.4 kB] 167s Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libyaml-0-2 armhf 0.2.5-1build1 [45.2 kB] 167s Get:134 http://ftpmaster.internal/ubuntu noble/main armhf logrotate armhf 3.21.0-2build1 [50.3 kB] 167s Get:135 http://ftpmaster.internal/ubuntu noble/main armhf netcat-openbsd armhf 1.226-1ubuntu2 [42.8 kB] 167s Get:136 http://ftpmaster.internal/ubuntu noble/main armhf python3-cffi-backend armhf 1.16.0-2build1 [68.0 kB] 167s Get:137 http://ftpmaster.internal/ubuntu noble/main armhf python3-netifaces armhf 0.11.0-2build3 [17.2 kB] 167s Get:138 http://ftpmaster.internal/ubuntu noble/main armhf rsyslog armhf 8.2312.0-3ubuntu9 [460 kB] 167s Get:139 http://ftpmaster.internal/ubuntu noble/main armhf sudo armhf 1.9.15p5-3ubuntu5 [936 kB] 167s Get:140 http://ftpmaster.internal/ubuntu noble/main armhf ubuntu-pro-client-l10n armhf 31.2.3 [19.4 kB] 167s Get:141 http://ftpmaster.internal/ubuntu noble/main armhf ubuntu-pro-client armhf 31.2.3 [216 kB] 167s Get:142 http://ftpmaster.internal/ubuntu noble/main armhf xdg-user-dirs armhf 0.18-1build1 [17.3 kB] 167s Get:143 http://ftpmaster.internal/ubuntu noble/main armhf xkb-data all 2.41-2ubuntu1 [395 kB] 167s Get:144 http://ftpmaster.internal/ubuntu noble/main armhf liblmdb0 armhf 0.9.31-1build1 [39.9 kB] 167s Get:145 http://ftpmaster.internal/ubuntu noble/main armhf libmaxminddb0 armhf 1.9.1-1build1 [23.2 kB] 167s Get:146 http://ftpmaster.internal/ubuntu noble/main armhf libnghttp2-14 armhf 1.59.0-1build4 [68.2 kB] 167s Get:147 http://ftpmaster.internal/ubuntu noble/main armhf bind9-dnsutils armhf 1:9.18.24-0ubuntu5 [149 kB] 167s Get:148 http://ftpmaster.internal/ubuntu noble/main armhf bind9-host armhf 1:9.18.24-0ubuntu5 [47.4 kB] 167s Get:149 http://ftpmaster.internal/ubuntu noble/main armhf bind9-libs armhf 1:9.18.24-0ubuntu5 [1148 kB] 167s Get:150 http://ftpmaster.internal/ubuntu noble/main armhf cpio armhf 2.15+dfsg-1ubuntu2 [81.8 kB] 167s Get:151 http://ftpmaster.internal/ubuntu noble/main armhf dmidecode armhf 3.5-3build1 [58.6 kB] 167s Get:152 http://ftpmaster.internal/ubuntu noble/main armhf tnftp armhf 20230507-2build3 [98.7 kB] 167s Get:153 http://ftpmaster.internal/ubuntu noble/main armhf ftp all 20230507-2build3 [4728 B] 167s Get:154 http://ftpmaster.internal/ubuntu noble/main armhf gettext-base armhf 0.21-14ubuntu2 [38.1 kB] 167s Get:155 http://ftpmaster.internal/ubuntu noble/main armhf hdparm armhf 9.65+ds-1build1 [96.7 kB] 167s Get:156 http://ftpmaster.internal/ubuntu noble/main armhf iputils-tracepath armhf 3:20240117-1build1 [12.8 kB] 167s Get:157 http://ftpmaster.internal/ubuntu noble/main armhf libdrm-common all 2.4.120-2build1 [8096 B] 167s Get:158 http://ftpmaster.internal/ubuntu noble/main armhf libdrm2 armhf 2.4.120-2build1 [36.6 kB] 167s Get:159 http://ftpmaster.internal/ubuntu noble/main armhf libjansson4 armhf 2.14-2build2 [28.2 kB] 168s Get:160 http://ftpmaster.internal/ubuntu noble/main armhf nftables armhf 1.0.9-1build1 [69.5 kB] 168s Get:161 http://ftpmaster.internal/ubuntu noble/main armhf libnftables1 armhf 1.0.9-1build1 [309 kB] 168s Get:162 http://ftpmaster.internal/ubuntu noble/main armhf libnuma1 armhf 2.0.18-1build1 [19.8 kB] 168s Get:163 http://ftpmaster.internal/ubuntu noble/main armhf pci.ids all 0.0~2024.03.31-1 [275 kB] 168s Get:164 http://ftpmaster.internal/ubuntu noble/main armhf pciutils armhf 1:3.10.0-2build1 [64.4 kB] 168s Get:165 http://ftpmaster.internal/ubuntu noble/main armhf libpci3 armhf 1:3.10.0-2build1 [29.5 kB] 168s Get:166 http://ftpmaster.internal/ubuntu noble/main armhf libuchardet0 armhf 0.0.8-1build1 [73.9 kB] 168s Get:167 http://ftpmaster.internal/ubuntu noble/main armhf libx11-data all 2:1.8.7-1build1 [115 kB] 168s Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libx11-6 armhf 2:1.8.7-1build1 [583 kB] 168s Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libxau6 armhf 1:1.0.9-1build6 [6312 B] 168s Get:170 http://ftpmaster.internal/ubuntu noble/main armhf libxdmcp6 armhf 1:1.1.3-0ubuntu6 [8738 B] 168s Get:171 http://ftpmaster.internal/ubuntu noble/main armhf libxext6 armhf 2:1.3.4-1build2 [25.3 kB] 168s Get:172 http://ftpmaster.internal/ubuntu noble/main armhf man-db armhf 2.12.0-4build2 [1202 kB] 168s Get:173 http://ftpmaster.internal/ubuntu noble/main armhf nano armhf 7.2-2build1 [269 kB] 168s Get:174 http://ftpmaster.internal/ubuntu noble/main armhf python3-gdbm armhf 3.12.3-0ubuntu1 [15.2 kB] 168s Get:175 http://ftpmaster.internal/ubuntu noble/main armhf tcpdump armhf 4.99.4-3ubuntu4 [425 kB] 168s Get:176 http://ftpmaster.internal/ubuntu noble/main armhf time armhf 1.9-0.2build1 [45.8 kB] 168s Get:177 http://ftpmaster.internal/ubuntu noble/main armhf ufw all 0.36.2-6 [169 kB] 168s Get:178 http://ftpmaster.internal/ubuntu noble/main armhf usb.ids all 2024.03.18-1 [223 kB] 168s Get:179 http://ftpmaster.internal/ubuntu noble/main armhf usbutils armhf 1:017-3build1 [75.6 kB] 168s Get:180 http://ftpmaster.internal/ubuntu noble/main armhf xauth armhf 1:1.1.2-1build1 [22.7 kB] 168s Get:181 http://ftpmaster.internal/ubuntu noble/main armhf apport-symptoms all 0.25 [13.1 kB] 168s Get:182 http://ftpmaster.internal/ubuntu noble/main armhf bcache-tools armhf 1.0.8-5build1 [20.2 kB] 168s Get:183 http://ftpmaster.internal/ubuntu noble/main armhf cryptsetup-bin armhf 2:2.7.0-1ubuntu4 [214 kB] 168s Get:184 http://ftpmaster.internal/ubuntu noble/main armhf dracut-install armhf 060+5-1ubuntu3 [34.1 kB] 168s Get:185 http://ftpmaster.internal/ubuntu noble/main armhf libeatmydata1 armhf 131-1ubuntu1 [7188 B] 168s Get:186 http://ftpmaster.internal/ubuntu noble/main armhf eatmydata all 131-1ubuntu1 [5584 B] 168s Get:187 http://ftpmaster.internal/ubuntu noble/main armhf ethtool armhf 1:6.7-1build1 [218 kB] 168s Get:188 http://ftpmaster.internal/ubuntu noble/main armhf libflashrom1 armhf 1.3.0-2.1ubuntu2 [138 kB] 168s Get:189 http://ftpmaster.internal/ubuntu noble/main armhf libfwupd2 armhf 1.9.16-1 [123 kB] 168s Get:190 http://ftpmaster.internal/ubuntu noble/main armhf libxmlb2 armhf 0.3.18-1 [56.9 kB] 168s Get:191 http://ftpmaster.internal/ubuntu noble/main armhf fwupd armhf 1.9.16-1 [4362 kB] 168s Get:192 http://ftpmaster.internal/ubuntu noble/main armhf gnupg-l10n all 2.4.4-2ubuntu17 [65.9 kB] 168s Get:193 http://ftpmaster.internal/ubuntu noble/main armhf libnl-genl-3-200 armhf 3.7.0-0.3build1 [10.3 kB] 168s Get:194 http://ftpmaster.internal/ubuntu noble/main armhf libnl-route-3-200 armhf 3.7.0-0.3build1 [162 kB] 168s Get:195 http://ftpmaster.internal/ubuntu noble/main armhf libnl-3-200 armhf 3.7.0-0.3build1 [49.0 kB] 168s Get:196 http://ftpmaster.internal/ubuntu noble/main armhf htop armhf 3.3.0-4build1 [139 kB] 168s Get:197 http://ftpmaster.internal/ubuntu noble/main armhf libatasmart4 armhf 0.19-5build3 [24.0 kB] 168s Get:198 http://ftpmaster.internal/ubuntu noble/main armhf libmpfr6 armhf 4.2.1-1build1 [229 kB] 168s Get:199 http://ftpmaster.internal/ubuntu noble/main armhf libbytesize1 armhf 2.10-1ubuntu2 [11.7 kB] 168s Get:200 http://ftpmaster.internal/ubuntu noble/main armhf libbytesize-common all 2.10-1ubuntu2 [3396 B] 168s Get:201 http://ftpmaster.internal/ubuntu noble/main armhf libinih1 armhf 55-1ubuntu2 [6506 B] 168s Get:202 http://ftpmaster.internal/ubuntu noble/main armhf liblzo2-2 armhf 2.10-2build4 [46.1 kB] 169s Get:203 http://ftpmaster.internal/ubuntu noble/main armhf libnspr4 armhf 2:4.35-1.1build1 [93.0 kB] 169s Get:204 http://ftpmaster.internal/ubuntu noble/main armhf libnss3 armhf 2:3.98-1build1 [1288 kB] 169s Get:205 http://ftpmaster.internal/ubuntu noble/main armhf libonig5 armhf 6.9.9-1build1 [148 kB] 169s Get:206 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-5ubuntu3 [19.2 kB] 169s Get:207 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-2 armhf 2.1.28+dfsg1-5ubuntu3 [49.7 kB] 169s Get:208 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules armhf 2.1.28+dfsg1-5ubuntu3 [61.4 kB] 169s Get:209 http://ftpmaster.internal/ubuntu noble/main armhf libsgutils2-1.46-2 armhf 1.46-3ubuntu4 [82.7 kB] 169s Get:210 http://ftpmaster.internal/ubuntu noble/main armhf libsigsegv2 armhf 2.14-1ubuntu2 [14.2 kB] 169s Get:211 http://ftpmaster.internal/ubuntu noble/main armhf libxkbcommon0 armhf 1.6.0-1build1 [108 kB] 169s Get:212 http://ftpmaster.internal/ubuntu noble/main armhf linux-headers-6.8.0-22 all 6.8.0-22.22 [13.6 MB] 170s Get:213 http://ftpmaster.internal/ubuntu noble/main armhf linux-headers-6.8.0-22-generic armhf 6.8.0-22.22 [1286 kB] 170s Get:214 http://ftpmaster.internal/ubuntu noble/main armhf linux-headers-generic armhf 6.8.0-22.22 [9638 B] 170s Get:215 http://ftpmaster.internal/ubuntu noble/main armhf make armhf 4.3-4.1build2 [162 kB] 170s Get:216 http://ftpmaster.internal/ubuntu noble/main armhf numactl armhf 2.0.18-1build1 [38.2 kB] 170s Get:217 http://ftpmaster.internal/ubuntu noble/main armhf patch armhf 2.7.6-7build3 [110 kB] 170s Get:218 http://ftpmaster.internal/ubuntu noble/main armhf python3-systemd armhf 235-1build4 [39.7 kB] 170s Get:219 http://ftpmaster.internal/ubuntu noble/main armhf screen armhf 4.9.1-1build1 [638 kB] 170s Get:220 http://ftpmaster.internal/ubuntu noble/main armhf sg3-utils armhf 1.46-3ubuntu4 [816 kB] 170s Get:221 http://ftpmaster.internal/ubuntu noble/main armhf sg3-utils-udev all 1.46-3ubuntu4 [5922 B] 170s Get:222 http://ftpmaster.internal/ubuntu noble/main armhf sysstat armhf 12.6.1-2 [479 kB] 170s Get:223 http://ftpmaster.internal/ubuntu noble/main armhf zstd armhf 1.5.5+dfsg2-2build1 [683 kB] 170s Get:224 http://ftpmaster.internal/ubuntu noble/main armhf cloud-init all 24.1.3-0ubuntu3 [598 kB] 170s Get:225 http://ftpmaster.internal/ubuntu noble/main armhf kpartx armhf 0.9.4-5ubuntu8 [31.5 kB] 170s Get:226 http://ftpmaster.internal/ubuntu noble/main armhf libevdev2 armhf 1.13.1+dfsg-1build1 [29.8 kB] 170s Get:227 http://ftpmaster.internal/ubuntu noble/main armhf multipath-tools armhf 0.9.4-5ubuntu8 [279 kB] 173s Preconfiguring packages ... 173s Fetched 78.7 MB in 1min 3s (1245 kB/s) 173s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 173s Preparing to unpack .../bash_5.2.21-2ubuntu4_armhf.deb ... 173s Unpacking bash (5.2.21-2ubuntu4) over (5.2.21-2ubuntu2) ... 173s Setting up bash (5.2.21-2ubuntu4) ... 173s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 174s Preparing to unpack .../coreutils_9.4-3ubuntu6_armhf.deb ... 174s Unpacking coreutils (9.4-3ubuntu6) over (9.4-3ubuntu5) ... 174s Setting up coreutils (9.4-3ubuntu6) ... 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 174s Preparing to unpack .../diffutils_1%3a3.10-1build1_armhf.deb ... 174s Unpacking diffutils (1:3.10-1build1) over (1:3.10-1) ... 174s Setting up diffutils (1:3.10-1build1) ... 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 174s Preparing to unpack .../findutils_4.9.0-5build1_armhf.deb ... 174s Unpacking findutils (4.9.0-5build1) over (4.9.0-5) ... 174s Setting up findutils (4.9.0-5build1) ... 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 174s Preparing to unpack .../grep_3.11-4build1_armhf.deb ... 174s Unpacking grep (3.11-4build1) over (3.11-4) ... 174s Setting up grep (3.11-4build1) ... 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 174s Preparing to unpack .../gzip_1.12-1ubuntu3_armhf.deb ... 174s Unpacking gzip (1.12-1ubuntu3) over (1.12-1ubuntu2) ... 175s Setting up gzip (1.12-1ubuntu3) ... 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 175s Preparing to unpack .../hostname_3.23+nmu2ubuntu2_armhf.deb ... 175s Unpacking hostname (3.23+nmu2ubuntu2) over (3.23+nmu2ubuntu1) ... 175s Setting up hostname (3.23+nmu2ubuntu2) ... 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 175s Preparing to unpack .../login_1%3a4.13+dfsg1-4ubuntu3_armhf.deb ... 175s Unpacking login (1:4.13+dfsg1-4ubuntu3) over (1:4.13+dfsg1-4ubuntu1) ... 175s Setting up login (1:4.13+dfsg1-4ubuntu3) ... 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 175s Preparing to unpack .../ncurses-bin_6.4+20240113-1ubuntu2_armhf.deb ... 175s Unpacking ncurses-bin (6.4+20240113-1ubuntu2) over (6.4+20240113-1ubuntu1) ... 175s Setting up ncurses-bin (6.4+20240113-1ubuntu2) ... 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 175s Preparing to unpack .../libperl5.38t64_5.38.2-3.2build2_armhf.deb ... 175s Unpacking libperl5.38t64:armhf (5.38.2-3.2build2) over (5.38.2-3.2build1) ... 176s Preparing to unpack .../perl_5.38.2-3.2build2_armhf.deb ... 176s Unpacking perl (5.38.2-3.2build2) over (5.38.2-3.2build1) ... 176s Preparing to unpack .../perl-base_5.38.2-3.2build2_armhf.deb ... 176s Unpacking perl-base (5.38.2-3.2build2) over (5.38.2-3.2build1) ... 176s Setting up perl-base (5.38.2-3.2build2) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 176s Preparing to unpack .../perl-modules-5.38_5.38.2-3.2build2_all.deb ... 176s Unpacking perl-modules-5.38 (5.38.2-3.2build2) over (5.38.2-3.2build1) ... 177s Preparing to unpack .../bzip2_1.0.8-5.1_armhf.deb ... 177s Unpacking bzip2 (1.0.8-5.1) over (1.0.8-5ubuntu1) ... 177s Preparing to unpack .../libbz2-1.0_1.0.8-5.1_armhf.deb ... 177s Unpacking libbz2-1.0:armhf (1.0.8-5.1) over (1.0.8-5ubuntu1) ... 177s Setting up libbz2-1.0:armhf (1.0.8-5.1) ... 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 177s Preparing to unpack .../libcrypt1_1%3a4.4.36-4build1_armhf.deb ... 177s Unpacking libcrypt1:armhf (1:4.4.36-4build1) over (1:4.4.36-4) ... 177s Setting up libcrypt1:armhf (1:4.4.36-4build1) ... 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 177s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-7_armhf.deb ... 177s Unpacking libdb5.3t64:armhf (5.3.28+dfsg2-7) over (5.3.28+dfsg2-6build1) ... 178s Preparing to unpack .../sed_4.9-2build1_armhf.deb ... 178s Unpacking sed (4.9-2build1) over (4.9-2) ... 178s Setting up sed (4.9-2build1) ... 178s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57972 files and directories currently installed.) 178s Preparing to unpack .../tar_1.35+dfsg-3build1_armhf.deb ... 178s Unpacking tar (1.35+dfsg-3build1) over (1.35+dfsg-3) ... 178s Setting up tar (1.35+dfsg-3build1) ... 178s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 181s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu5_armhf.deb ... 181s Unpacking libpam-modules-bin (1.5.3-5ubuntu5) over (1.5.3-5ubuntu4) ... 181s Setting up libpam-modules-bin (1.5.3-5ubuntu5) ... 182s pam_namespace.service is a disabled or a static unit not running, not starting it. 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 182s Preparing to unpack .../libpam-modules_1.5.3-5ubuntu5_armhf.deb ... 182s Unpacking libpam-modules:armhf (1.5.3-5ubuntu5) over (1.5.3-5ubuntu4) ... 182s Setting up libpam-modules:armhf (1.5.3-5ubuntu5) ... 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 182s Preparing to unpack .../logsave_1.47.0-2.4~exp1ubuntu4_armhf.deb ... 182s Unpacking logsave (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2.4~exp1ubuntu3) ... 182s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu4_armhf.deb ... 182s Leaving 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2 to /lib/arm-linux-gnueabihf/libe2p.so.2.usr-is-merged by libext2fs2t64' 182s Leaving 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2.3 to /lib/arm-linux-gnueabihf/libe2p.so.2.3.usr-is-merged by libext2fs2t64' 182s Leaving 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2 to /lib/arm-linux-gnueabihf/libext2fs.so.2.usr-is-merged by libext2fs2t64' 182s Leaving 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2.4 to /lib/arm-linux-gnueabihf/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' 182s Unpacking libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2.4~exp1ubuntu3) ... 182s Setting up libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) ... 183s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 187s Preparing to unpack .../python3_3.12.3-0ubuntu1_armhf.deb ... 187s Unpacking python3 (3.12.3-0ubuntu1) over (3.12.2-0ubuntu2) ... 188s Preparing to unpack .../libpython3-stdlib_3.12.3-0ubuntu1_armhf.deb ... 188s Unpacking libpython3-stdlib:armhf (3.12.3-0ubuntu1) over (3.12.2-0ubuntu2) ... 188s Preparing to unpack .../libacl1_2.3.2-1build1_armhf.deb ... 188s Unpacking libacl1:armhf (2.3.2-1build1) over (2.3.2-1) ... 188s Setting up libacl1:armhf (2.3.2-1build1) ... 188s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57973 files and directories currently installed.) 188s Preparing to unpack .../rsync_3.2.7-1ubuntu1_armhf.deb ... 188s Unpacking rsync (3.2.7-1ubuntu1) over (3.2.7-1build2) ... 188s Preparing to unpack .../libgpg-error-l10n_1.47-3build2_all.deb ... 188s Unpacking libgpg-error-l10n (1.47-3build2) over (1.47-3build1) ... 188s Preparing to unpack .../libgpg-error0_1.47-3build2_armhf.deb ... 188s Unpacking libgpg-error0:armhf (1.47-3build2) over (1.47-3build1) ... 188s Setting up libgpg-error0:armhf (1.47-3build2) ... 189s (Reading database ... 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You need policy admin privileges to manage profiles. 216s 218s Setting up netcat-openbsd (1.226-1ubuntu2) ... 218s Setting up libnghttp2-14:armhf (1.59.0-1build4) ... 218s Setting up libsgutils2-1.46-2:armhf (1.46-3ubuntu4) ... 218s Setting up gettext-base (0.21-14ubuntu2) ... 218s Setting up xkb-data (2.41-2ubuntu1) ... 218s Setting up liblzo2-2:armhf (2.10-2build4) ... 218s Setting up hdparm (9.65+ds-1build1) ... 218s Setting up krb5-locales (1.20.1-6ubuntu2) ... 218s Setting up libcom-err2:armhf (1.47.0-2.4~exp1ubuntu4) ... 218s Setting up bzip2 (1.0.8-5.1) ... 218s Setting up man-db (2.12.0-4build2) ... 218s Updating database of manual pages ... 220s apparmor_parser: Unable to replace "/usr/bin/man". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 220s 221s man-db.service is a disabled or a static unit not running, not starting it. 221s Setting up apport-symptoms (0.25) ... 221s Setting up usbutils (1:017-3build1) ... 221s Setting up libelf1t64:armhf (0.190-1.1build4) ... 221s Setting up libjansson4:armhf (2.14-2build2) ... 221s Setting up libkrb5support0:armhf (1.20.1-6ubuntu2) ... 221s Setting up tzdata (2024a-2ubuntu1) ... 221s 221s Current default time zone: 'Etc/UTC' 221s Local time is now: Fri Apr 19 01:08:28 UTC 2024. 221s Universal Time is now: Fri Apr 19 01:08:28 UTC 2024. 221s Run 'dpkg-reconfigure tzdata' if you wish to change it. 221s 221s Setting up libcap2-bin (1:2.66-5ubuntu2) ... 221s Setting up libatasmart4:armhf (0.19-5build3) ... 221s Setting up libwrap0:armhf (7.6.q-33) ... 221s Setting up libx11-data (2:1.8.7-1build1) ... 221s Setting up make (4.3-4.1build2) ... 221s Setting up libmpfr6:armhf (4.2.1-1build1) ... 221s Setting up libnspr4:armhf (2:4.35-1.1build1) ... 221s Setting up gnupg-l10n (2.4.4-2ubuntu17) ... 221s Setting up libncurses6:armhf (6.4+20240113-1ubuntu2) ... 221s Setting up libdbus-1-3:armhf (1.14.10-4ubuntu4) ... 221s Setting up libsigsegv2:armhf (2.14-1ubuntu2) ... 221s Setting up libfribidi0:armhf (1.0.13-3build1) ... 221s Setting up perl-modules-5.38 (5.38.2-3.2build2) ... 221s Setting up libbytesize-common (2.10-1ubuntu2) ... 221s Setting up libmnl0:armhf (1.0.5-2build1) ... 221s Setting up patch (2.7.6-7build3) ... 221s Setting up libss2:armhf (1.47.0-2.4~exp1ubuntu4) ... 221s Setting up usb.ids (2024.03.18-1) ... 221s Setting up sudo (1.9.15p5-3ubuntu5) ... 221s Setting up libncursesw6:armhf (6.4+20240113-1ubuntu2) ... 221s Setting up libk5crypto3:armhf (1.20.1-6ubuntu2) ... 221s Setting up libxtables12:armhf (1.8.10-3ubuntu2) ... 221s Setting up logsave (1.47.0-2.4~exp1ubuntu4) ... 221s Setting up libdb5.3t64:armhf (5.3.28+dfsg2-7) ... 221s Setting up libutempter0:armhf (1.2.1-3build1) ... 221s Setting up libicu74:armhf (74.2-1ubuntu3) ... 221s Setting up nano (7.2-2build1) ... 221s Setting up libpci3:armhf (1:3.10.0-2build1) ... 221s Setting up libnuma1:armhf (2.0.18-1build1) ... 221s Setting up python-apt-common (2.7.7ubuntu1) ... 221s Setting up libnfnetlink0:armhf (1.0.2-2build1) ... 221s Setting up dbus-session-bus-common (1.14.10-4ubuntu4) ... 221s Setting up libuchardet0:armhf (0.0.8-1build1) ... 221s Setting up kpartx (0.9.4-5ubuntu8) ... 221s Setting up libeatmydata1:armhf (131-1ubuntu1) ... 221s Setting up libnl-3-200:armhf (3.7.0-0.3build1) ... 221s Setting up gpgconf (2.4.4-2ubuntu17) ... 221s Setting up libx11-6:armhf (2:1.8.7-1build1) ... 221s Setting up mawk (1.3.4.20240123-1build1) ... 221s Setting up libbytesize1:armhf (2.10-1ubuntu2) ... 221s Setting up libkrb5-3:armhf (1.20.1-6ubuntu2) ... 221s Setting up libevent-core-2.1-7t64:armhf (2.1.12-stable-9ubuntu2) ... 221s Setting up libperl5.38t64:armhf (5.38.2-3.2build2) ... 221s Setting up tnftp (20230507-2build3) ... 221s Setting up dmidecode (3.5-3build1) ... 221s Setting up dbus-system-bus-common (1.14.10-4ubuntu4) ... 221s Setting up libfido2-1:armhf (1.14.0-1build3) ... 221s Setting up libgpg-error-l10n (1.47-3build2) ... 221s Setting up libdrm-common (2.4.120-2build1) ... 221s Setting up libpam-cap:armhf (1:2.66-5ubuntu2) ... 222s Setting up iputils-ping (3:20240117-1build1) ... 222s Setting up libjson-c5:armhf (0.17-1build1) ... 222s Setting up libevdev2:armhf (1.13.1+dfsg-1build1) ... 222s Setting up sysstat (12.6.1-2) ... 224s Setting up tmux (3.4-1build1) ... 224s Setting up zstd (1.5.5+dfsg2-2build1) ... 224s Setting up dbus-bin (1.14.10-4ubuntu4) ... 224s Setting up libonig5:armhf (6.9.9-1build1) ... 224s Setting up gpg (2.4.4-2ubuntu17) ... 224s Setting up iputils-tracepath (3:20240117-1build1) ... 224s Setting up libkmod2:armhf (31+20240202-2ubuntu6) ... 224s Setting up libpopt0:armhf (1.19+dfsg-1build1) ... 224s Setting up ethtool (1:6.7-1build1) ... 224s Setting up gnupg-utils (2.4.4-2ubuntu17) ... 224s Setting up sg3-utils (1.46-3ubuntu4) ... 224s Setting up ncurses-term (6.4+20240113-1ubuntu2) ... 224s Setting up libxkbcommon0:armhf (1.6.0-1build1) ... 224s Setting up logrotate (3.21.0-2build1) ... 224s logrotate.service is a disabled or a static unit not running, not starting it. 224s Setting up linux-headers-6.8.0-22-generic (6.8.0-22.22) ... 224s Setting up eatmydata (131-1ubuntu1) ... 224s Setting up gpg-agent (2.4.4-2ubuntu17) ... 226s Setting up libpython3.12-stdlib:armhf (3.12.3-1) ... 226s Setting up numactl (2.0.18-1build1) ... 226s Setting up python3.12 (3.12.3-1) ... 228s Setting up gpgsm (2.4.4-2ubuntu17) ... 228s Setting up libxext6:armhf (2:1.3.4-1build2) ... 228s Setting up screen (4.9.1-1build1) ... 228s Setting up libnftnl11:armhf (1.2.6-2build1) ... 228s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu4) ... 228s update-initramfs: deferring update (trigger activated) 230s e2scrub_all.service is a disabled or a static unit not running, not starting it. 230s Setting up libnss3:armhf (2:3.98-1build1) ... 230s Setting up linux-headers-generic (6.8.0-22.22) ... 230s Setting up dbus-daemon (1.14.10-4ubuntu4) ... 230s Setting up kmod (31+20240202-2ubuntu6) ... 230s Setting up sg3-utils-udev (1.46-3ubuntu4) ... 230s update-initramfs: deferring update (trigger activated) 230s Setting up libnl-route-3-200:armhf (3.7.0-0.3build1) ... 230s Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-5ubuntu3) ... 230s Setting up dirmngr (2.4.4-2ubuntu17) ... 231s Setting up dbus-user-session (1.14.10-4ubuntu4) ... 231s Setting up libflashrom1:armhf (1.3.0-2.1ubuntu2) ... 231s Setting up perl (5.38.2-3.2build2) ... 231s Setting up dbus (1.14.10-4ubuntu4) ... 231s A reboot is required to replace the running dbus-daemon. 231s Please reboot the system when convenient. 231s Setting up libgssapi-krb5-2:armhf (1.20.1-6ubuntu2) ... 231s Setting up ftp (20230507-2build3) ... 231s Setting up keyboxd (2.4.4-2ubuntu17) ... 231s Setting up pciutils (1:3.10.0-2build1) ... 231s Setting up libsasl2-2:armhf (2.1.28+dfsg1-5ubuntu3) ... 231s Setting up gpg-wks-server (2.4.4-2ubuntu17) ... 231s Setting up libdrm2:armhf (2.4.120-2build1) ... 231s Setting up dracut-install (060+5-1ubuntu3) ... 231s Setting up xauth (1:1.1.2-1build1) ... 231s Setting up libnetfilter-conntrack3:armhf (1.0.9-6build1) ... 231s Setting up libnl-genl-3-200:armhf (3.7.0-0.3build1) ... 231s Setting up gnupg (2.4.4-2ubuntu17) ... 231s Setting up libcryptsetup12:armhf (2:2.7.0-1ubuntu4) ... 232s Setting up fwupd (1.9.16-1) ... 232s Installing new version of config file /etc/fwupd/remotes.d/lvfs-testing.conf ... 232s Installing new version of config file /etc/fwupd/remotes.d/lvfs.conf ... 232s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 232s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 232s fwupd.service is a disabled or a static unit not running, not starting it. 233s Setting up rsync (3.2.7-1ubuntu1) ... 234s rsync.service is a disabled or a static unit not running, not starting it. 234s Setting up libpython3-stdlib:armhf (3.12.3-0ubuntu1) ... 234s Setting up cryptsetup-bin (2:2.7.0-1ubuntu4) ... 234s Setting up libnftables1:armhf (1.0.9-1build1) ... 234s Setting up nftables (1.0.9-1build1) ... 235s Setting up gpg-wks-client (2.4.4-2ubuntu17) ... 235s Setting up bind9-libs:armhf (1:9.18.24-0ubuntu5) ... 235s Setting up iptables (1.8.10-3ubuntu2) ... 235s Setting up htop (3.3.0-4build1) ... 235s Setting up openssh-client (1:9.6p1-3ubuntu13) ... 235s Setting up python3 (3.12.3-0ubuntu1) ... 235s Setting up multipath-tools (0.9.4-5ubuntu8) ... 236s Setting up python3-gi (3.48.2-1) ... 237s Setting up python3-netifaces:armhf (0.11.0-2build3) ... 237s Setting up bind9-host (1:9.18.24-0ubuntu5) ... 237s Setting up python3-systemd (235-1build4) ... 237s Setting up python3-cffi-backend:armhf (1.16.0-2build1) ... 237s Setting up openssh-sftp-server (1:9.6p1-3ubuntu13) ... 237s Setting up cloud-init (24.1.3-0ubuntu3) ... 240s Setting up openssh-server (1:9.6p1-3ubuntu13) ... 242s Setting up python3-gdbm:armhf (3.12.3-0ubuntu1) ... 242s Setting up python3-problem-report (2.28.1-0ubuntu1) ... 242s Setting up python3-apt (2.7.7ubuntu1) ... 243s Setting up ufw (0.36.2-6) ... 245s Setting up python3-apport (2.28.1-0ubuntu1) ... 245s Setting up bind9-dnsutils (1:9.18.24-0ubuntu5) ... 245s Setting up ubuntu-pro-client (31.2.3) ... 245s apparmor_parser: Unable to replace "ubuntu_pro_apt_news". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 245s 248s Setting up ubuntu-pro-client-l10n (31.2.3) ... 248s Setting up apport-core-dump-handler (2.28.1-0ubuntu1) ... 249s Setting up apport (2.28.1-0ubuntu1) ... 249s Installing new version of config file /etc/apport/crashdb.conf ... 250s apport-autoreport.service is a disabled or a static unit not running, not starting it. 250s Processing triggers for debianutils (5.17build1) ... 250s Processing triggers for install-info (7.1-3build2) ... 251s Processing triggers for initramfs-tools (0.142ubuntu24) ... 251s Processing triggers for libc-bin (2.39-0ubuntu8) ... 251s Processing triggers for systemd (255.4-1ubuntu7) ... 251s Reading package lists... 252s Building dependency tree... 252s Reading state information... 253s The following packages will be REMOVED: 253s linux-headers-6.8.0-20* linux-headers-6.8.0-20-generic* 253s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 253s After this operation, 91.8 MB disk space will be freed. 254s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89111 files and directories currently installed.) 254s Removing linux-headers-6.8.0-20-generic (6.8.0-20.20) ... 255s Removing linux-headers-6.8.0-20 (6.8.0-20.20) ... 259s autopkgtest [01:09:06]: rebooting testbed after setup commands that affected boot 300s autopkgtest [01:09:47]: testbed running kernel: Linux 5.4.0-174-generic #193-Ubuntu SMP Thu Mar 7 15:13:37 UTC 2024 328s autopkgtest [01:10:15]: @@@@@@@@@@@@@@@@@@@@ apt-source cpl-plugin-uves 350s Get:1 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-uves 6.1.8+dfsg-2build3 (dsc) [2552 B] 350s Get:2 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-uves 6.1.8+dfsg-2build3 (tar) [1773 kB] 350s Get:3 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-uves 6.1.8+dfsg-2build3 (diff) [12.1 kB] 350s gpgv: Signature made Mon Apr 1 05:41:20 2024 UTC 350s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 350s gpgv: Can't check signature: No public key 350s dpkg-source: warning: cannot verify inline signature for ./cpl-plugin-uves_6.1.8+dfsg-2build3.dsc: no acceptable signature found 350s autopkgtest [01:10:37]: testing package cpl-plugin-uves version 6.1.8+dfsg-2build3 352s autopkgtest [01:10:39]: build not needed 364s autopkgtest [01:10:51]: test test-recipe.py: preparing testbed 375s Reading package lists... 376s Building dependency tree... 376s Reading state information... 376s Starting pkgProblemResolver with broken count: 0 377s Starting 2 pkgProblemResolver with broken count: 0 377s Done 378s The following additional packages will be installed: 378s cpl-plugin-uves libblas3 libcext0 libcfitsio10t64 libcplcore26 libcpldfs26 378s libcpldrs26 libcplui26 liberfa1 libfftw3-double3 libfftw3-single3 378s libgfortran5 libgomp1 libgsl27 libgslcblas0 libjs-jquery 378s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 378s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-sphinxdoc 378s libjs-underscore liblapack3 libqfits0 libwcs8 python3-astropy 378s python3-astropy-iers-data python3-coverage python3-cpl python3-dateutil 378s python3-erfa python3-hypothesis python3-iniconfig python3-numpy 378s python3-packaging python3-pluggy python3-ply python3-pytest 378s python3-pytest-arraydiff python3-pytest-astropy 378s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 378s python3-pytest-filter-subpackage python3-pytest-mock 378s python3-pytest-remotedata python3-sortedcontainers 378s Suggested packages: 378s cpl-plugin-uves-calib cpl-plugin-uves-doc libfftw3-bin libfftw3-dev 378s gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html libxml2-utils 378s python-astropy-doc python3-astropy-affiliated python3-bs4 python3-h5py 378s python3-matplotlib python3-pandas python-coverage-doc gdb 378s python-hypothesis-doc gcc gfortran python3-dev python-ply-doc 378s python-pytest-mock-doc python-sortedcontainers-doc 378s Recommended packages: 378s javascript-common libjs-jquery-datatables python3-scipy python3-click 378s The following NEW packages will be installed: 378s autopkgtest-satdep cpl-plugin-uves libblas3 libcext0 libcfitsio10t64 378s libcplcore26 libcpldfs26 libcpldrs26 libcplui26 liberfa1 libfftw3-double3 378s libfftw3-single3 libgfortran5 libgomp1 libgsl27 libgslcblas0 libjs-jquery 378s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 378s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-sphinxdoc 378s libjs-underscore liblapack3 libqfits0 libwcs8 python3-astropy 378s python3-astropy-iers-data python3-coverage python3-cpl python3-dateutil 378s python3-erfa python3-hypothesis python3-iniconfig python3-numpy 378s python3-packaging python3-pluggy python3-ply python3-pytest 378s python3-pytest-arraydiff python3-pytest-astropy 378s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 378s python3-pytest-filter-subpackage python3-pytest-mock 378s python3-pytest-remotedata python3-sortedcontainers 378s 0 upgraded, 49 newly installed, 0 to remove and 0 not upgraded. 378s Need to get 18.7 MB/18.7 MB of archives. 378s After this operation, 73.7 MB of additional disk space will be used. 378s Get:1 /tmp/autopkgtest.OxybpE/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [724 B] 378s Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 379s Get:3 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2ubuntu2 [11.5 kB] 379s Get:4 http://ftpmaster.internal/ubuntu noble/universe armhf libcext0 armhf 7.3.2+ds-1build3 [24.9 kB] 379s Get:5 http://ftpmaster.internal/ubuntu noble/universe armhf libcfitsio10t64 armhf 4.3.1-1.1build2 [504 kB] 379s Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 14-20240412-0ubuntu1 [125 kB] 379s Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libfftw3-double3 armhf 3.3.10-1ubuntu3 [369 kB] 379s Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libfftw3-single3 armhf 3.3.10-1ubuntu3 [376 kB] 379s Get:9 http://ftpmaster.internal/ubuntu noble/universe armhf libcplcore26 armhf 7.3.2+ds-1build3 [498 kB] 379s Get:10 http://ftpmaster.internal/ubuntu noble/universe armhf libcplui26 armhf 7.3.2+ds-1build3 [34.5 kB] 379s Get:11 http://ftpmaster.internal/ubuntu noble/universe armhf libcpldfs26 armhf 7.3.2+ds-1build3 [39.4 kB] 379s Get:12 http://ftpmaster.internal/ubuntu noble/universe armhf libwcs8 armhf 8.2.2+ds-3build2 [235 kB] 379s Get:13 http://ftpmaster.internal/ubuntu noble/universe armhf libcpldrs26 armhf 7.3.2+ds-1build3 [68.7 kB] 379s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libgslcblas0 armhf 2.7.1+dfsg-6ubuntu2 [77.8 kB] 379s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libgsl27 armhf 2.7.1+dfsg-6ubuntu2 [827 kB] 379s Get:16 http://ftpmaster.internal/ubuntu noble/universe armhf libqfits0 armhf 6.2.0-9ubuntu1 [35.8 kB] 379s Get:17 http://ftpmaster.internal/ubuntu noble/universe armhf cpl-plugin-uves armhf 6.1.8+dfsg-2build3 [1186 kB] 379s Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 379s Get:19 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran5 armhf 14-20240412-0ubuntu1 [316 kB] 379s Get:20 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-metadata all 12-4 [6582 B] 379s Get:21 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB] 379s Get:22 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 379s Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 379s Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libjs-sphinxdoc all 7.2.6-6 [149 kB] 379s Get:25 http://ftpmaster.internal/ubuntu noble/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 379s Get:26 http://ftpmaster.internal/ubuntu noble/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 379s Get:27 http://ftpmaster.internal/ubuntu noble/main armhf python3-packaging all 24.0-1 [41.1 kB] 379s Get:28 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pluggy all 1.4.0-1 [20.4 kB] 379s Get:29 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest all 7.4.4-1 [305 kB] 379s Get:30 http://ftpmaster.internal/ubuntu noble/main armhf python3-dateutil all 2.8.2-3ubuntu1 [79.4 kB] 379s Get:31 http://ftpmaster.internal/ubuntu noble/main armhf python3-sortedcontainers all 2.4.0-2 [27.6 kB] 379s Get:32 http://ftpmaster.internal/ubuntu noble/universe armhf python3-hypothesis all 6.98.15-1 [311 kB] 379s Get:33 http://ftpmaster.internal/ubuntu noble/main armhf python3-numpy armhf 1:1.26.4+ds-6ubuntu1 [3541 kB] 380s Get:34 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-arraydiff all 0.6.1-2 [10.2 kB] 380s Get:35 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-astropy-header all 0.2.2-1 [8190 B] 380s Get:36 http://ftpmaster.internal/ubuntu noble/universe armhf python3-coverage armhf 7.4.4+dfsg1-0ubuntu2 [146 kB] 380s Get:37 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 380s Get:38 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-cov all 4.1.0-1 [21.5 kB] 380s Get:39 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-doctestplus all 1.2.0-1 [23.1 kB] 380s Get:40 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-filter-subpackage all 0.2.0-1 [6094 B] 380s Get:41 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-mock all 3.12.0-1.1 [11.3 kB] 380s Get:42 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-remotedata all 0.4.1-1 [8650 B] 380s Get:43 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-astropy all 0.11.0-1 [5902 B] 380s Get:44 http://ftpmaster.internal/ubuntu noble/main armhf python3-ply all 3.11-6 [46.5 kB] 380s Get:45 http://ftpmaster.internal/ubuntu noble/universe armhf python3-astropy-iers-data all 0.2024.01.01.00.33.39-1 [2046 kB] 380s Get:46 http://ftpmaster.internal/ubuntu noble/universe armhf liberfa1 armhf 2.0.1-1 [130 kB] 380s Get:47 http://ftpmaster.internal/ubuntu noble/universe armhf python3-erfa armhf 2.0.1.1+ds-3 [309 kB] 380s Get:48 http://ftpmaster.internal/ubuntu noble/universe armhf python3-astropy armhf 6.0.0-1ubuntu2 [3771 kB] 380s Get:49 http://ftpmaster.internal/ubuntu noble/universe armhf python3-cpl armhf 0.7.4-2build10 [33.5 kB] 382s Fetched 18.7 MB in 2s (8826 kB/s) 382s Selecting previously unselected package libjs-jquery. 382s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57961 files and directories currently installed.) 382s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 382s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 382s Selecting previously unselected package libjs-jquery-hotkeys. 382s Preparing to unpack .../01-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2ubuntu2_all.deb ... 382s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2ubuntu2) ... 382s Selecting previously 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for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Recipe flames_cal_mkmaster: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'norm_method': 'exptime', 'backsub.mmethod': 'median', 'backsub.npoints': 82, 'backsub.radiusy': 2, 'backsub.sdegree': 1, 'backsub.smoothx': -1.0, 'backsub.smoothy': -1.0} 432s Docstring: Creates a master flat frame to support FIBER mode data reduction 432s 432s This recipe creates a composite master flat frame to reduce FIBER mode 432s data by: 1) Group each input raw flat frame per grating setting. Then 432s for each set: 1a) subtracts the master bias frame from each flat field 432s frame, 1b) divides each flat field frame by the exposure time for 432s that frame, 1c) takes the median of all bias subtracted, normalized 432s raw flat frames, 1d) optionally subtracts the master dark frame, and 432s 1e) subtracts the background to get the bias subtracted, optionally 432s dark subtracted, normalized, background subtracted master flat-field 432s frame. 2) Creates a synthetic master frame resulting from the 432s coaddition of each master flat frame obtained by each set 432s Symbolically, masterflat = median( (flat_i - masterbias)/exptime_i ) 432s - masterdark/exptime - background. The input flat field 432s frames must have same tag which must match (SFLAT_(BLUE|RED), for 432s example SFLAT_BLUE or FLAT_RED. Also, a master bias (MASTER_BIAS_xxxx) 432s and ordertable (ORDER_TABLE_xxxx) must be provided for each chip (xxxx 432s = BLUE, REDL, REDU). A master dark frame (MASTER_(P)DARK_xxxx) may 432s optionally be provided. On blue input the recipe computes one master 432s flat field frame; on red input the recipe produces a master flat field 432s frame for each chip (MASTER_SFLAT_xxxx). 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to 432s the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot syntax 432s on its standard input. Valid examples of such a 432s command may include 'gnuplot -persist' and 'cat > 432s mygnuplot$$.gp'. A finer control of the plotting 432s options can be obtained by writing an executable 432s script, e.g. my_gnuplot.pl, that executes gnuplot 432s after setting the desired gnuplot options (e.g. set 432s terminal pslatex color). To turn off plotting, set 432s this parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s norm_method: Method used to build master frame (str; default: 432s 'exptime') 432s backsub.mmethod: Background measuring method. If equal to 'median' 432s the background is sampled using the median of a 432s subwindow. If 'minimum', the subwindow minimum value 432s is used. If 'no', no background subtraction is done. 432s (str; default: 'median') 432s backsub.npoints: This is the number of columns in interorder space 432s used to sample the background. (int; default: 82) 432s backsub.radiusy: The height (in pixels) of the background sampling 432s window is (2*radiusy + 1). This parameter is not 432s corrected for binning. (int; default: 2) 432s backsub.sdegree: Degree of interpolating splines. Currently only 432s degree = 1 is supported (int; default: 1) 432s backsub.smoothx: If spline interpolation is used to measure the 432s background, the x-radius of the post-smoothing 432s window is (smoothx * image_width). Here, 432s 'image_width' is the image width after binning. If 432s negative, the default values are used: (25.0/4096) 432s for blue flat-field frames, (50.0/4096) for red 432s flat-field frames, (300.0/4096) for blue science 432s frames and (300.0/4096) for red science frames. 432s (float; default: -1.0) 432s backsub.smoothy: If spline interpolation is used to measure the 432s background, the y-radius of the post-smoothing 432s window is (smoothy * image_height). Here, 432s 'image_height' is the image height after binning. If 432s negative, the default values are used: (100.0/2048) 432s for blue flat-field frames, (300.0/2048) for red 432s flat-field frames, (200.0/2048) for blue science 432s frames and (500.0/2048) for red science frames. 432s (float; default: -1.0) 432s Author: Andrea Modigliani 432s 432s 432s Recipe flames_cal_orderpos: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'use_guess_tab': 1, 'radx': 2, 'rady': 1, 'mmethod': 'median', 'backsubgrid': 50, 'backsubradiusy': 2, 'backsubkappa': 4.0, 'backsubdegx': 2, 'backsubdegy': 2, 'samplewidth': 50, 'minslope': 0.0, 'maxslope': 0.2, 'sloperes': 120, 'pthres': 0.2, 'tracestep': 10, 'minthresh': 0.2, 'maxgap': 0.2, 'maxrms': 100.0, 'defpol1': -1, 'defpol2': -1, 'kappa': 4.0} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Docstring: Defines uves-echelle-simultaneous calibration fibre order positions 432s 432s The recipe defines the simultaneus calibration fibre order positions 432s in a fibre-echelle image. The orders are initially detected by means 432s of a Hough transformation, the orders are then traced, and the 432s positions are finally fitted with a global polynomial. Expected 432s input frames are simultaneous calibration fibre flat fields, 432s FIB_ORDEF_RED and optionally for each chip a DRS setup table, 432s DRS_TABLE_(REDL|REDU), for backward compatibility, and optionally a 432s guess order table FIB_ORD_GUE_(REDL|REDU) and a master bias, 432s MASTER_BIAS_(REDL|REDU). The recipe processes only the first raw frame 432s found. Output are two order tables FIB_ORD_TAB_(REDL|REDU) contaning 432s the columns: X : Position along x Order : 432s Relative order number Y : Order line centroid location 432s Yfit : The fitted order location dY : 432s Uncertainty of Y dYfit_Square : Variance of Yfit Residual 432s : Y - Yfit Residual_Square : Residual^2 OrderRMS : Root mean 432s squared residual of initial one-dimensional linear 432s fit of order The bivariate fit polynomial itself is stored in table 432s extension no. 2. The 3rd table extension contains a table that defines 432s the active fibre traces and their positions (for support of 432s FLAMES/UVES) and 2 images frames FIB_ORDEF_(REDL|REDU) 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to 432s the command specified by this parameter. The plotting 432s command must contain the substring 'gnuplot' and must 432s be able to parse gnuplot syntax on its standard 432s input. Valid examples of such a command may include 432s 'gnuplot -persist' and 'cat > mygnuplot$$.gp'. A 432s finer control of the plotting options can be obtained 432s by writing an executable script, e.g. my_gnuplot.pl, 432s that executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex color). To 432s turn off plotting, set this parameter to 'no' (str; 432s default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s use_guess_tab: If a Guess order table is provided this parameter set 432s how it is used:0: No usage, 1: use it to set 432s lower/upper Y raws where order are searched 2: the 432s order table try to fully match the guess (int; 432s default: 1) 432s radx: Half X size of median filtering window (int; default: 432s 2) 432s rady: Half Y size of median filtering window (int; default: 432s 1) 432s mmethod: Background subtraction method. If equal to 'median' 432s the background is sampled using the median of a sub- 432s window. If 'minimum', the minimum sub-window value is 432s used. If 'no', no background subtraction is done. 432s (str; default: 'median') 432s backsubgrid: Number of grid points (in x- and y-direction) used to 432s estimate the background (mode=poly). (int; default: 432s 50) 432s backsubradiusy: The height (in pixels) of the background sampling 432s window is (2*radiusy + 1). This parameter is not 432s corrected for binning. (int; default: 2) 432s backsubkappa: The value of kappa in the one-sided kappa-sigma 432s clipping used to estimate the background (mode=poly). 432s (float; default: 4.0) 432s backsubdegx: Degree (in x) of polynomial used to estimate the 432s background (mode=poly). (int; default: 2) 432s backsubdegy: Degree (in y) of polynomial used to estimate the 432s background (mode=poly). (int; default: 2) 432s samplewidth: Separation of sample traces (used by Hough transform) 432s in input image (int; default: 50) 432s minslope: Minimum possible line slope. This should be the 432s 'physical' slope on the chip, i.e. not taking binning 432s factors into account, which is handled by the recipe 432s (float; default: 0.0) 432s maxslope: Maximum possible line slope (float; default: 0.2) 432s sloperes: Resolution (width in pixels) of Hough space (int; 432s default: 120) 432s pthres: In automatic mode, or if the number of orders to 432s detect is read from a guess table, the detection of 432s new lines stops when the intensity of a candidate 432s line drops to less than 'pthres' times the intensity 432s of the previous detection. (float; default: 0.2) 432s tracestep: The step size used when tracing the orders (int; 432s default: 10) 432s minthresh: The minimum threshold value is (min + minthres*(max - 432s min)). Here 'min' and 'max' are the lowest and 432s highest pixel values in the central bin of the order 432s (float; default: 0.2) 432s maxgap: If the order line drops below detection threshold, 432s the order tracing algorithm will try to jump a gap of 432s maximum size 'maxgap' multiplied by the image width 432s (float; default: 0.2) 432s maxrms: When fitting the orders with straight lines, this is 432s the maximum allowed RMS relative to the median RMS of 432s all orders (float; default: 100.0) 432s defpol1: The degree of the bivarite fit (cross dispersion 432s direction). If negative, the degree is optimized to 432s give the best fit (int; default: -1) 432s defpol2: The degree of the bivarite fit (order number). If 432s negative, the degree is optimized to give the best 432s fit (int; default: -1) 432s kappa: Used for kappa-sigma clipping of the final polynomial 432s fit. If negative, no clipping is done (float; 432s default: 4.0) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe flames_cal_predict: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'mbox_x': 40, 'mbox_y': 40, 'trans_x': 0.0, 'trans_y': 0.0, 'ech_angle_off': 0.0, 'cd_angle_off': 0.0, 'ccd_rot_angle_off': 0.0, 'compute_regression_sw': True, 'def_pol1': 4, 'def_pol2': 5, 'kappa': 4.5, 'tol': 2.0} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Docstring: Implements the UVES physical model 432s 432s This recipe implements the UVES physical model Input files are flames- 432s uves formatcheck frames identified by the tag FIB_ARC_LAMP_FORM_RED 432s and a ThAr line reference table identified by the tag 432s LINE_REFER_TABLE. Optional input are master bias frames identified by 432s the tag MASTER_BIAS_(REDL|REDU). The recipe extracts from the input 432s files FITS header data indicating the instrument setting and ambiental 432s atmospheric conditions, then using the model predicts X,Y position of 432s the lines listed in the LINE_REFER_TABLE table which are imaging on 432s the detector and stores this information in an guess order and a guess 432s line table. Output are a guess line table, FIB_LIN_GUE_(REDL|REDU), 432s and a guess order table, FIB_ORD_GUE_(REDL|REDU). If the user 432s provides in input also master format checks having tag 432s MASTER_FORM_(REDL|REDU), the recipe performs also a stability check 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are 432s redirected to the command specified by this 432s parameter. The plotting command must contain 432s the substring 'gnuplot' and must be able to 432s parse gnuplot syntax on its standard input. 432s Valid examples of such a command may include 432s 'gnuplot -persist' and 'cat > mygnuplot$$.gp'. 432s A finer control of the plotting options can be 432s obtained by writing an executable script, e.g. 432s my_gnuplot.pl, that executes gnuplot after 432s setting the desired gnuplot options (e.g. set 432s terminal pslatex color). To turn off plotting, 432s set this parameter to 'no' (str; default: 432s 'no') 432s process_chip: For RED arm data process the redl, redu, or 432s both chip(s) (str; default: 'both') 432s mbox_x: Match box X size (int; default: 40) 432s mbox_y: Match box Y size (int; default: 40) 432s trans_x: Detector translation along X (float; default: 432s 0.0) 432s trans_y: Detector translation along Y (float; default: 432s 0.0) 432s ech_angle_off: Offset on echelle angle (float; default: 0.0) 432s cd_angle_off: Offset on cross disperser angle (float; 432s default: 0.0) 432s ccd_rot_angle_off: Offset on CCD rotation angle (float; default: 432s 0.0) 432s compute_regression_sw: Compute regression? (bool; default: True) 432s def_pol1: Polynomial X deg (int; default: 4) 432s def_pol2: Polynomial Y deg (int; default: 5) 432s kappa: Kappa value in kappa sigma clipping on 432s RESIDUAL between YFIT and Y columns (float; 432s default: 4.5) 432s tol: Tolerance in kappa sigma clipping on RESIDUAL 432s between YFIT and Y columns (float; default: 432s 2.0) 432s Author: Andrea Modigliani 432s 432s 432s Recipe flames_cal_prep_sff_ofpos: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'ext_method': 'opt', 'bias_method': 'M', 'bias_value': 200, 'filter_switch': 'none', 'sat_thr': 55000, 'fileprep': True, 'cubify': True, 'save_flat_size': -1, 'clean_tmp_products': False} 432s Docstring: Determines order and fibre postions 432s 432s Fibre & order position determination procedure: You should feed the 432s recipe with: - even, odd, all fibre images (FIB_FF_EVEN_RED, 432s FIB_FF_ODD_RED, FIB_FF_ALL_RED) - single fibre images, 432s FIB_ORDEF_(REDL|REDU) - master bias frames, MASTER_BIAS_(REDL|REDU) - 432s master slit flatfield frames, MASTER_SFLAT_(REDL|REDU) - order guess 432s tables, FIB_ORD_GUE_(REDL|REDU). Products are: - Fibre order table 432s (FIB_ORDEF_TABLE_chip) - All fibre info table (FIB_FF_ALL_INFO_TAB) - 432s Odd fibre info table (FIB_FF_ODD_INFO_TAB) - Even fibre info table 432s (FIB_FF_EVEN_INFO_TAB) - Slit flatfield common (SLIT_FF_COM_chip) - 432s Slit flatfield norm (SLIT_FF_NOR_chip) - Slit flatfield data 432s (SLIT_FF_DTC_chip) - Slit flatfield sigma (SLIT_FF_SGC_chip) - Slit 432s flatfield bad pixel (SLIT_FF_BPC_chip) - Slit flatfield boundary 432s (SLIT_FF_BNC_chip) - Fibre flatfield common (FIB_FF_COM_chip) - Fibre 432s flatfield norm (FIB_FF_NOR_chip) - Fibre flatfield norm sigma 432s (FIB_FF_NSG_chip) chip=REDL and REDU 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' and 432s 'cat > mygnuplot$$.gp'. A finer control of the 432s plotting options can be obtained by writing an 432s executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this parameter 432s to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s ext_method: Extraction method (str; default: 'opt') 432s bias_method: Bias subtraction method, M for master bias frame, 432s N for no bias subtraction, V to subtract a 432s constant bias level defined by the parameter 432s bias_value (str; default: 'M') 432s bias_value: Bias value (only if bias_method = V) (int; 432s default: 200) 432s filter_switch: Filter switch (str; default: 'none') 432s sat_thr: Saturation threshold (int; default: 55000) 432s fileprep: Slitff* and Fibreff* file preparation. If fast 432s extraction method is used it should be set to 432s FALSE (bool; default: True) 432s cubify: Cubify switch (bool; default: True) 432s save_flat_size: To be sure to use the flat part of a slit 432s flatsone may need to subtract this bit. The 432s default value -1, is used for automatic setting: 432s if WCEN=520 save_flat_size=0, else 432s save_flat_size=2. Values explicitly set by user 432s overwrite this rule. (int; default: -1) 432s clean_tmp_products: Input data format (bool; default: False) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe flames_cal_wavecal: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'nwindows': 1, 'length': 7.0, 'offset': 0.0, 'range': 8, 'minlines': 0, 'maxlines': 0, 'shiftmax': 10.0, 'shiftstep': 0.1, 'shifttoler': 0.05, 'alpha': 0.1, 'maxerror': 20.0, 'degree': 4, 'tolerance': 0.6, 'kappa': 4.0, 'extract.method': 'average', 'extract.kappa': 10.0, 'extract.chunk': 32, 'extract.profile': 'auto', 'extract.skymethod': 'optimal', 'extract.oversample': -1, 'extract.best': True, 'rebin.wavestep': -1.0, 'rebin.wavestep_redu': -1.0, 'rebin.scale': False} 432s Docstring: Performs the wavelength calibration 432s 432s The recipe performs a wavelength calibration for each extraction 432s window. Conceptually, each chip contains a number of order lines, each 432s of which contains a number of fibre traces, each of which contains a 432s number of extraction windows. For FLAMES/UVES data there are multiple 432s traces per order but only one extraction window per trace. The number 432s of traces is defined in the order table while the geometry of the 432s extraction windows is specified by recipe parameters (see below). 432s Expected input for this recipe is an arc lamp frame, FIB_ARC_LAMP_RED, 432s FIB_ORDEF_TABLE_(REDL|REDU), 'guess' line table(s) for each chip, 432s FIB_LIN_GUE_(REDL|REDU), a wavelength catalogue table, 432s LINE_REFER_TABLE, and optionally a wavelength table of bright lines, 432s LINE_INTMON_TABLE, used only for computing Quality Control parameters. 432s The output line table(s), FIB_LINE_TABLE_(REDL|REDU), contains the 432s columns X : Horizontal position (from Gaussian fit) of 432s detected line dX : Uncertainty (one sigma) of X Ynew 432s : Vertical position of detected line XWidth : Width (in pixels) 432s of detected line from Gaussian fit Peak : Intensity of 432s detected line Background : Fitted background (ADU) of detected line 432s Slope : Linear background slope (ADU/pixel) of detected line 432s from Gaussian fit Intensity : Intensity of detected line scaled to 432s unit exposure time. (This column only present if a 432s LINE_INTMON_TABLE is provided.) Order : Absolute 432s order number of detected line Y : Relative order number of 432s detected line (it's not a very descriptive column name) 432s WaveC : Wavelength of this line (computed using the resulting 432s dispersion relation) dLambdaC : Uncertainty (one sigma) of 432s 'WaveC'. Pixel : The width in w.l.u. of a pixel (computed 432s locally). Residual : Residual (in w.l.u.) of this line 432s Residual_pix : Residual (in pixels) of this line Lambda_candidate : 432s Nearest line in catalogue dLambda_cat_sq : Squared distance to 432s nearest catalogue line dLambda_nn_sq : Squared distance to nearest 432s neighbour multiplied by ALPHA Ident : The wavelength associated 432s with this emission line, or invalid if this line was 432s not identified dIdent : Uncertainty of catalogue wavelength 432s Select : 1 if the line was identified, 0 otherwise NLinSol 432s : 1 if the line was identified and accepted for the 432s polynomial fit, 0 otherwise Intensity : Intensity of detected line 432s scaled to unit exposure time. (This column is present 432s only if a LINE_INTMON_TABLE is provided.) The 2nd 432s table extension contains the dispersion relation (a 2d polynomial). 432s The 3rd table extension contains the map from (pixel, pixel)-space to 432s physical order numbers (used internally by the calibration recipe; 432s another 2d polynomial). If there is more than one extraction window, 432s the results of each calibration is stored in subsequent table 432s extensions of the same FITS file. For example, extensions 4, 5 and 6 432s would contain the resulting line table (and its two associated 432s polynomials) for the second extraction window. The results for the 432s calibration of the n'th extraction window is stored in extensions 432s (3*n - 2) to 3*n. 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer control of 432s the plotting options can be obtained by writing 432s an executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this parameter 432s to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s nwindows: Number of extraction windows per trace. The 432s windows will be aligned (i.e. no overlap and no 432s spacing between adjacent windows). Unless an 432s offset is specified, the middle window(s) is 432s centered on the trace (int; default: 1) 432s length: Length (in pixels) of each extraction window. 432s This parameter is also equal to the seperation 432s of adjacent window centers, causing the 432s extraction windows to always be aligned. The 432s parameter is automatically adjusted according to 432s the binning of the input raw frame. If negative, 432s the extraction window length is determined 432s automatically to cover the full slit (float; 432s default: 7.0) 432s offset: A global offset (in pixels) of all extraction 432s windows (float; default: 0.0) 432s range: Width (pix) of search window is 2*range + 1. 432s This parameter is automatically adjusted 432s according to binning. (int; default: 8) 432s minlines: Minimum number of lines to detect. If zero, the 432s default value (1100 for BLUE/REDL chips; 1000 432s for REDU chip) is used. (int; default: 0) 432s maxlines: Maximum number of lines to detect. If zero, the 432s default value (1600 for BLUE/REDL chip; 1400 for 432s REDU chip) is used. (int; default: 0) 432s shiftmax: The maximum shift (pix) in either direction 432s compared to guess solution. This parameter is 432s automatically corrected for binning (float; 432s default: 10.0) 432s shiftstep: The step size (pix) used when searching for the 432s optimum shift. This parameter is automatically 432s corrected for binning (float; default: 0.1) 432s shifttoler: Tolerance (pix) when matching shifted lines. 432s This parameter is not adjusted according to 432s binning (float; default: 0.05) 432s alpha: The parameter that controls the distance to the 432s nearest neighbours (float; default: 0.1) 432s maxerror: This parameter controls the graceful exit of the 432s identification loop. If the RMS of the global 432s fit exceeds this value (pix) the iteration stops 432s (float; default: 20.0) 432s degree: Degrees of the global 2d dispersion polynomial. 432s If a negative number is specified, the 432s polynomial degrees are automatically selected by 432s starting from (1, 1) and inreasing the degrees 432s as long as the RMS residual decreases 432s significantly (int; default: 4) 432s tolerance: Tolerance of fit. If positive, the tolerance is 432s in pixel units. If negative, abs(tolerance) is 432s in wavelength units. Lines with residuals worse 432s than the tolerance are excluded from the final 432s fit. Unlike in previous versions, this parameter 432s is not corrected for CCD binning. This rejection 432s based on the absolute residual in pixel can be 432s effectively disabled by setting the tolerance to 432s a very large number (e.g. 9999). In that case 432s outliers will be rejected using only kappa sigma 432s clipping. (float; default: 0.6) 432s kappa: Lines with residuals more then kappa stdev are 432s rejected from the final fit (float; default: 432s 4.0) 432s extract.method: Extraction method. (2d/optimal not supported by 432s uves_cal_wavecal, weighted supported only by 432s uves_cal_wavecal, 2d not supported by 432s uves_cal_response) (str; default: 'average') 432s extract.kappa: In optimal extraction mode, this is the 432s threshold for bad (i.e. hot/cold) pixel 432s rejection. If a pixel deviates more than 432s kappa*sigma (where sigma is the uncertainty of 432s the pixel flux) from the inferred spatial 432s profile, its weight is set to zero. Range: 432s [-1,100]. If this parameter is negative, no 432s rejection is performed. (float; default: 10.0) 432s extract.chunk: In optimal extraction mode, the chunk size (in 432s pixels) used for fitting the analytical profile 432s (a fit of the analytical profile to single bins 432s would suffer from low statistics). (int; 432s default: 32) 432s extract.profile: In optimal extraction mode, the kind of profile 432s to use. 'gauss' gives a Gaussian profile, 432s 'moffat' gives a Moffat profile with beta=4 and 432s a possible linear sky contribution. 'virtual' 432s uses a virtual resampling algorithm (i.e. 432s measures and uses the actual object profile). 432s 'constant' assumes a constant spatial profile 432s and allows optimal extraction of wavelength 432s calibration frames. 'auto' will automatically 432s select the best method based on the estimated 432s S/N of the object. For low S/N, 'moffat' or 432s 'gauss' are recommended (for robustness). For 432s high S/N, 'virtual' is recommended (for 432s accuracy). In the case of virtual resampling, a 432s precise determination of the order positions is 432s required; therefore the order-definition is 432s repeated using the (assumed non-low S/N) science 432s frame (str; default: 'auto') 432s extract.skymethod: In optimal extraction mode, the sky subtraction 432s method to use. 'median' estimates the sky as the 432s median of pixels along the slit (ignoring pixels 432s close to the object), whereas 'optimal' does a 432s chi square minimization along the slit to obtain 432s the best combined object and sky levels. The 432s optimal method gives the most accurate sky 432s determination but is also a bit slower than the 432s median method (str; default: 'optimal') 432s extract.oversample: The oversampling factor used for the virtual 432s resampling algorithm. If negative, the value 5 432s is used for S/N <=200, and the value 10 is used 432s if the estimated S/N is > 200 (int; default: -1) 432s extract.best: (optimal extraction only) If false (fastest), 432s the spectrum is extracted only once. If true 432s (best), the spectrum is extracted twice, the 432s second time using improved variance estimates 432s based on the first iteration. Better variance 432s estimates slightly improve the obtained signal 432s to noise but at the cost of increased execution 432s time (bool; default: True) 432s rebin.wavestep: The bin size used for BLUE/REDL data (in w.l.u.) 432s in wavelength space. If negative, a step size of 432s 2/3 * ( average pixel size ) is used. (float; 432s default: -1.0) 432s rebin.wavestep_redu: The bin size used for REDU data (in w.l.u.) in 432s wavelength space. If negative, a step size of 432s 2/3 * ( average pixel size ) is used. (float; 432s default: -1.0) 432s rebin.scale: Whether or not to multiply by the factor 432s dx/dlambda (pixels per wavelength) during the 432s rebinning to conserve the flux. This option is 432s disabled as default because applying the flat 432s field correction already ensures flux 432s conservation. Therefore this parameter should be 432s TRUE (for response and science data) only if 432s reduce.ffmethd = no. (bool; default: False)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s 432s Author: Jonas M. Larsen 432s 432s 432s Recipe flames_obs_redchain: 432s version 6.1.8 432s Parameters: {'scired': True, 'debug': False, 'plotter': 'no', 'process_chip': 'both', 'uves_cal_mdark.stack_method': 'median', 'uves_cal_mdark.klow': 5.0, 'uves_cal_mdark.khigh': 5.0, 'uves_cal_mdark.niter': 5, 'uves_cal_mdark.qc_dark.reg.num_x': 4, 'uves_cal_mdark.qc_dark.reg.num_y': 4, 'uves_cal_mdark.qc_dark.reg.box_sx': 100, 'uves_cal_mdark.qc_dark.reg.box_sy': 100, 'uves_cal_mdark.qc_dark.reg.border_x': 100, 'uves_cal_mdark.qc_dark.reg.border_y': 100, 'uves_cal_mdark.qc_dark.reg.when': 0, 'flames_cal_predict.mbox_x': 40, 'flames_cal_predict.mbox_y': 40, 'flames_cal_predict.trans_x': 0.0, 'flames_cal_predict.trans_y': 0.0, 'flames_cal_predict.ech_angle_off': 0.0, 'flames_cal_predict.cd_angle_off': 0.0, 'flames_cal_predict.ccd_rot_angle_off': 0.0, 'flames_cal_predict.compute_regression_sw': True, 'flames_cal_predict.def_pol1': 4, 'flames_cal_predict.def_pol2': 5, 'flames_cal_predict.kappa': 4.5, 'flames_cal_predict.tol': 2.0, 'flames_cal_orderpos.use_guess_tab': 1, 'flames_cal_orderpos.radx': 2, 'flames_cal_orderpos.rady': 1, 'flames_cal_orderpos.mmethod': 'median', 'flames_cal_orderpos.backsubgrid': 50, 'flames_cal_orderpos.backsubradiusy': 2, 'flames_cal_orderpos.backsubkappa': 4.0, 'flames_cal_orderpos.backsubdegx': 2, 'flames_cal_orderpos.backsubdegy': 2, 'flames_cal_orderpos.samplewidth': 50, 'flames_cal_orderpos.minslope': 0.0, 'flames_cal_orderpos.maxslope': 0.2, 'flames_cal_orderpos.sloperes': 120, 'flames_cal_orderpos.pthres': 0.2, 'flames_cal_orderpos.tracestep': 10, 'flames_cal_orderpos.minthresh': 0.2, 'flames_cal_orderpos.maxgap': 0.2, 'flames_cal_orderpos.maxrms': 100.0, 'flames_cal_orderpos.defpol1': -1, 'flames_cal_orderpos.defpol2': -1, 'flames_cal_orderpos.kappa': 4.0, 'uves_cal_mflat.norm_method': 'explevel', 'uves_cal_mflat.backsub.mmethod': 'median', 'uves_cal_mflat.backsub.npoints': 82, 'uves_cal_mflat.backsub.radiusy': 2, 'uves_cal_mflat.backsub.sdegree': 1, 'uves_cal_mflat.backsub.smoothx': -1.0, 'uves_cal_mflat.backsub.smoothy': -1.0, 'flames_obs_scired.ext_method': 'opt', 'flames_obs_scired.cor_max_fnd': 'Y', 'flames_obs_scired.cor_def_rng': 6.0, 'flames_obs_scired.cor_def_pnt': 25, 'flames_obs_scired.cor_def_off': 0.0, 'flames_obs_scired.corvel_iter': 1, 'flames_obs_scired.bias_method': 'M', 'flames_obs_scired.bias_value': 200, 'flames_obs_scired.cubify_sw': 'N', 'flames_obs_scired.filt_sw': 'none', 'flames_obs_scired.bkg_max_io_win': 500, 'flames_obs_scired.bkg_xy_win_sz_x': 6, 'flames_obs_scired.bkg_xy_win_sz_y': 2, 'flames_obs_scired.pixel_thresh_max': 55000, 'flames_obs_scired.pixel_thresh_min': -20, 'flames_obs_scired.drs_k_s_thre': 10.0, 'flames_obs_scired.drs_base_name': 'fxb', 'flames_obs_scired.drs_maxyshift': 3.0, 'flames_obs_scired.drs_ext_w_siz': 10.0, 'flames_obs_scired.merge': 'optimal', 'flames_obs_scired.merge_delt1': -1.0, 'flames_obs_scired.merge_delt2': -1.0, 'flames_obs_scired.clean_tmp_products': False, 'flames_obs_scired.rebin.wavestep': -1.0, 'flames_obs_scired.rebin.wavestep_redu': -1.0, 'flames_obs_scired.rebin.scale': False, 'uves_cal_mbias.clean_traps': False, 'uves_cal_mbias.stack_method': 'median', 'uves_cal_mbias.klow': 5.0, 'uves_cal_mbias.khigh': 5.0, 'uves_cal_mbias.niter': 5, 'uves_cal_mbias.pd_compute': False, 'uves_cal_mbias.dc_mask_x': 1, 'uves_cal_mbias.dc_mask_y': 1, 'flames_cal_wavecal.nwindows': 1, 'flames_cal_wavecal.length': 7.0, 'flames_cal_wavecal.offset': 0.0, 'flames_cal_wavecal.range': 8, 'flames_cal_wavecal.minlines': 0, 'flames_cal_wavecal.maxlines': 0, 'flames_cal_wavecal.shiftmax': 10.0, 'flames_cal_wavecal.shiftstep': 0.1, 'flames_cal_wavecal.shifttoler': 0.05, 'flames_cal_wavecal.alpha': 0.1, 'flames_cal_wavecal.maxerror': 20.0, 'flames_cal_wavecal.degree': 4, 'flames_cal_wavecal.tolerance': 0.6, 'flames_cal_wavecal.kappa': 4.0, 'flames_cal_wavecal.extract.method': 'average', 'flames_cal_wavecal.extract.kappa': 10.0, 'flames_cal_wavecal.extract.chunk': 32, 'flames_cal_wavecal.extract.profile': 'auto', 'flames_cal_wavecal.extract.skymethod': 'optimal', 'flames_cal_wavecal.extract.oversample': -1, 'flames_cal_wavecal.extract.best': True, 'flames_cal_wavecal.rebin.wavestep': -1.0, 'flames_cal_wavecal.rebin.wavestep_redu': -1.0, 'flames_cal_wavecal.rebin.scale': False, 'flames_cal_prep_sff_ofpos.ext_method': 'opt', 'flames_cal_prep_sff_ofpos.bias_method': 'M', 'flames_cal_prep_sff_ofpos.bias_value': 200, 'flames_cal_prep_sff_ofpos.filter_switch': 'none', 'flames_cal_prep_sff_ofpos.sat_thr': 55000, 'flames_cal_prep_sff_ofpos.fileprep': True, 'flames_cal_prep_sff_ofpos.cubify': True, 'flames_cal_prep_sff_ofpos.save_flat_size': -1, 'flames_cal_prep_sff_ofpos.clean_tmp_products': False} 432s Docstring: Runs the full UVES-FIBRE reduction chain 432s 432s This recipe does a complete science reduction. It runs all necessary 432s calibration recipes depending on the availability of raw/processed 432s calibration frames. Input frames are all UVES-FIBER raw and reference 432s frames: formatchecks, FIB_ARC_LAMP_FORM_RED, order definition frames, 432s FIB_ORDER_FLAT_RED, biases, BIAS_RED, darks, DARK_RED, flats, 432s SFLAT_RED, arc lamps, FIB_ARC_LAMP_RED, standard stars, 432s FIB_STANDARD_RED a wavelength catalogue table,LINE_REFER_TABLE, and 432s optionally a wavelength table of bright lines,LINE_INTMON_TABLE, used 432s only for computing Quality Control parameters. a reference standard 432s star flux table, FLUX_STD_TABLE, a table describing the atmospheric 432s extintion,EXTCOEFF_TABLE. Optionally, science frames, SCIENCE_xxx, or 432s UVES_SCI_POINT_xxx, or UVES_SCI_EXTND_xxx, or UVES_SCI_SLICER_xxx. 432s For further details on the data reduction and the input frame types 432s refer to the man page of the individual recipes. 432s 432s Parameters: 432s scired: Whether or not to do 432s science reduction. If 432s false, only master 432s calibration frames are 432s created. If false, 432s either zero or all 432s necessary calibration 432s frames must be provided 432s for each arm (bool; 432s default: True) 432s debug: Whether or not to save 432s intermediate results to 432s local directory (bool; 432s default: False) 432s plotter: Any plots produced by 432s the recipe are 432s redirected to the 432s command specified by 432s this parameter. The 432s plotting command must 432s contain the substring 432s 'gnuplot' and must be 432s able to parse gnuplot 432s syntax on its standard 432s input. Valid examples 432s of such a command may 432s include 'gnuplot 432s -persist' and 'cat > 432s mygnuplot$$.gp'. A 432s finer control of the 432s plotting options can be 432s obtained by writing an 432s executable script, e.g. 432s my_gnuplot.pl, that 432s executes gnuplot after 432s setting the desired 432s gnuplot options (e.g. 432s set terminal pslatex 432s color). To turn off 432s plotting, set this 432s parameter to 'no' (str; 432s default: 'no') 432s process_chip: For RED arm data 432s process the redl, redu, 432s or both chip(s) (str; 432s default: 'both') 432s uves_cal_mdark.stack_method: Method used to build 432s master frame (str; 432s default: 'median') 432s uves_cal_mdark.klow: Kappa used to clip low 432s level values, when 432s method is set to 'mean' 432s (float; default: 5.0) 432s uves_cal_mdark.khigh: Kappa used to clip high 432s level values, when 432s method is set to 'mean' 432s (float; default: 5.0) 432s uves_cal_mdark.niter: Number of kappa sigma 432s iterations, when method 432s is set to 'mean' (int; 432s default: 5) 432s uves_cal_mdark.stack_method: Method used to build 432s master frame (str; 432s default: 'median') 432s uves_cal_mdark.klow: Kappa used to clip low 432s level values, when 432s method is set to 'mean' 432s (float; default: 5.0) 432s uves_cal_mdark.khigh: Kappa used to clip high 432s level values, when 432s method is set to 'mean' 432s (float; default: 5.0) 432s uves_cal_mdark.niter: Number of kappa sigma 432s iterations, when method 432s is set to 'mean' (int; 432s default: 5) 432s uves_cal_mdark.qc_dark.reg.num_x: Number of regions along 432s the X axis (where 432s mean/med/rms are 432s computed). (int; 432s default: 4) 432s uves_cal_mdark.qc_dark.reg.num_y: Number of regions along 432s the Y axis(where 432s mean/med/rms are 432s computed). (int; 432s default: 4) 432s uves_cal_mdark.qc_dark.reg.box_sx: Region X size [pix] 432s (int; default: 100) 432s uves_cal_mdark.qc_dark.reg.box_sy: Region Y size [pix] 432s (int; default: 100) 432s uves_cal_mdark.qc_dark.reg.border_x: X distance between the 432s left hand side of the 432s detector and the left 432s hand side of the region 432s [pix] (int; default: 432s 100) 432s uves_cal_mdark.qc_dark.reg.border_y: X distance between the 432s left hand side of the 432s detector and the left 432s hand side of the region 432s [pix] (int; default: 432s 100) 432s uves_cal_mdark.qc_dark.reg.when: When QC analysis is 432s performed. 0: on each 432s raw frame or 1: on the 432s master frame (int; 432s default: 0) 432s flames_cal_predict.mbox_x: Match box X size (int; 432s default: 40) 432s flames_cal_predict.mbox_y: Match box Y size (int; 432s default: 40) 432s flames_cal_predict.trans_x: Detector translation 432s along X (float; 432s default: 0.0) 432s flames_cal_predict.trans_y: Detector translation 432s along Y (float; 432s default: 0.0) 432s flames_cal_predict.ech_angle_off: Offset on echelle angle 432s (float; default: 0.0) 432s flames_cal_predict.cd_angle_off: Offset on cross 432s disperser angle (float; 432s default: 0.0) 432s flames_cal_predict.ccd_rot_angle_off: Offset on CCD rotation 432s angle (float; default: 432s 0.0) 432s flames_cal_predict.compute_regression_sw: Compute regression? 432s (bool; default: True) 432s flames_cal_predict.def_pol1: Polynomial X deg (int; 432s default: 4) 432s flames_cal_predict.def_pol2: Polynomial Y deg (int; 432s default: 5) 432s flames_cal_predict.kappa: Kappa value in kappa 432s sigma clipping on 432s RESIDUAL between YFIT 432s and Y columns (float; 432s default: 4.5) 432s flames_cal_predict.tol: Tolerance in kappa 432s sigma clipping on 432s RESIDUAL between YFIT 432s and Y columns (float; 432s default: 2.0) 432s flames_cal_orderpos.use_guess_tab: If a Guess order table 432s is provided this 432s parameter set how it is 432s used:0: No usage, 1: 432s use it to set 432s lower/upper Y raws 432s where order are 432s searched 2: the order 432s table try to fully 432s match the guess (int; 432s default: 1) 432s flames_cal_orderpos.radx: Half X size of median 432s filtering window (int; 432s default: 2) 432s flames_cal_orderpos.rady: Half Y size of median 432s filtering window (int; 432s default: 1) 432s flames_cal_orderpos.mmethod: Background subtraction 432s method. If equal to 432s 'median' the background 432s is sampled using the 432s median of a sub-window. 432s If 'minimum', the 432s minimum sub-window 432s value is used. If 'no', 432s no background 432s subtraction is done. 432s (str; default: 432s 'median') 432s flames_cal_orderpos.backsubgrid: Number of grid points 432s (in x- and y-direction) 432s used to estimate the 432s background (mode=poly). 432s (int; default: 50) 432s flames_cal_orderpos.backsubradiusy: The height (in pixels) 432s of the background 432s sampling window is 432s (2*radiusy + 1). This 432s parameter is not 432s corrected for binning. 432s (int; default: 2) 432s flames_cal_orderpos.backsubkappa: The value of kappa in 432s the one-sided kappa- 432s sigma clipping used to 432s estimate the background 432s (mode=poly). (float; 432s default: 4.0) 432s flames_cal_orderpos.backsubdegx: Degree (in x) of 432s polynomial used to 432s estimate the background 432s (mode=poly). (int; 432s default: 2) 432s flames_cal_orderpos.backsubdegy: Degree (in y) of 432s polynomial used to 432s estimate the background 432s (mode=poly). (int; 432s default: 2) 432s flames_cal_orderpos.samplewidth: Separation of sample 432s traces (used by Hough 432s transform) in input 432s image (int; default: 432s 50) 432s flames_cal_orderpos.minslope: Minimum possible line 432s slope. This should be 432s the 'physical' slope on 432s the chip, i.e. not 432s taking binning factors 432s into account, which is 432s handled by the recipe 432s (float; default: 0.0) 432s flames_cal_orderpos.maxslope: Maximum possible line 432s slope (float; default: 432s 0.2) 432s flames_cal_orderpos.sloperes: Resolution (width in 432s pixels) of Hough space 432s (int; default: 120) 432s flames_cal_orderpos.pthres: In automatic mode, or 432s if the number of orders 432s to detect is read from 432s a guess table, the 432s detection of new lines 432s stops when the 432s intensity of a 432s candidate line drops to 432s less than 'pthres' 432s times the intensity of 432s the previous detection. 432s (float; default: 0.2) 432s flames_cal_orderpos.tracestep: The step size used when 432s tracing the orders 432s (int; default: 10) 432s flames_cal_orderpos.minthresh: The minimum threshold 432s value is (min + 432s minthres*(max - min)). 432s Here 'min' and 'max' 432s are the lowest and 432s highest pixel values in 432s the central bin of the 432s order (float; default: 432s 0.2) 432s flames_cal_orderpos.maxgap: If the order line drops 432s below detection 432s threshold, the order 432s tracing algorithm will 432s try to jump a gap of 432s maximum size 'maxgap' 432s multiplied by the image 432s width (float; default: 432s 0.2) 432s flames_cal_orderpos.maxrms: When fitting the orders 432s with straight lines, 432s this is the maximum 432s allowed RMS relative to 432s the median RMS of all 432s orders (float; default: 432s 100.0) 432s flames_cal_orderpos.defpol1: The degree of the 432s bivarite fit (cross 432s dispersion direction). 432s If negative, the degree 432s is optimized to give 432s the best fit (int; 432s default: -1) 432s flames_cal_orderpos.defpol2: The degree of the 432s bivarite fit (order 432s number). If negative, 432s the degree is optimized 432s to give the best fit 432s (int; default: -1) 432s flames_cal_orderpos.kappa: Used for kappa-sigma 432s clipping of the final 432s polynomial fit. If 432s negative, no clipping 432s is done (float; 432s default: 4.0) 432s uves_cal_mflat.norm_method: Method used to build 432s master frame (str; 432s default: 'explevel') 432s uves_cal_mflat.backsub.mmethod: Background measuring 432s method. If equal to 432s 'median' the background 432s is sampled using the 432s median of a subwindow. 432s If 'minimum', the 432s subwindow minimum value 432s is used. If 'no', no 432s background subtraction 432s is done. (str; default: 432s 'median') 432s uves_cal_mflat.backsub.npoints: This is the number of 432s columns in interorder 432s space used to sample 432s the background. (int; 432s default: 82) 432s uves_cal_mflat.backsub.radiusy: The height (in pixels) 432s of the background 432s sampling window is 432s (2*radiusy + 1). This 432s parameter is not 432s corrected for binning. 432s (int; default: 2) 432s uves_cal_mflat.backsub.sdegree: Degree of interpolating 432s splines. Currently only 432s degree = 1 is supported 432s (int; default: 1) 432s uves_cal_mflat.backsub.smoothx: If spline interpolation 432s is used to measure the 432s background, the 432s x-radius of the post- 432s smoothing window is 432s (smoothx * 432s image_width). Here, 432s 'image_width' is the 432s image width after 432s binning. If negative, 432s the default values are 432s used: (25.0/4096) for 432s blue flat-field frames, 432s (50.0/4096) for red 432s flat-field frames, 432s (300.0/4096) for blue 432s science frames and 432s (300.0/4096) for red 432s science frames. (float; 432s default: -1.0) 432s uves_cal_mflat.backsub.smoothy: If spline interpolation 432s is used to measure the 432s background, the 432s y-radius of the post- 432s smoothing window is 432s (smoothy * 432s image_height). Here, 432s 'image_height' is the 432s image height after 432s binning. If negative, 432s the default values are 432s used: (100.0/2048) for 432s blue flat-field frames, 432s (300.0/2048) for red 432s flat-field frames, 432s (200.0/2048) for blue 432s science frames and 432s (500.0/2048) for red 432s science frames. (float; 432s default: -1.0) 432s flames_obs_scired.ext_method: Extraction method (str; 432s default: 'opt') 432s flames_obs_scired.cor_max_fnd: Find correlation 432s maximum? (str; default: 432s 'Y') 432s flames_obs_scired.cor_def_rng: Correlation range size? 432s (float; default: 6.0) 432s flames_obs_scired.cor_def_pnt: Correlation sampling 432s points? (int; default: 432s 25) 432s flames_obs_scired.cor_def_off: Correlation center 432s offset? (float; 432s default: 0.0) 432s flames_obs_scired.corvel_iter: Velocity correlation 432s iteration number 432s (SimCal) (int; default: 432s 1) 432s flames_obs_scired.bias_method: Bias subtraction method 432s (str; default: 'M') 432s flames_obs_scired.bias_value: Bias value (only if 432s bias_method = V) (int; 432s default: 200) 432s flames_obs_scired.cubify_sw: Cubify switch (str; 432s default: 'N') 432s flames_obs_scired.filt_sw: Filter switch (str; 432s default: 'none') 432s flames_obs_scired.bkg_max_io_win: Background window 432s number in each full 432s inter order (int; 432s default: 500) 432s flames_obs_scired.bkg_xy_win_sz_x: x maximum size of each 432s background window: 432s (int; default: 6) 432s flames_obs_scired.bkg_xy_win_sz_y: y maximum size of each 432s background window: 432s (int; default: 2) 432s flames_obs_scired.pixel_thresh_max: Pixel saturation 432s threshold max (int; 432s default: 55000) 432s flames_obs_scired.pixel_thresh_min: Pixel saturation 432s threshold min (int; 432s default: -20) 432s flames_obs_scired.drs_k_s_thre: Kappa sigma threshold 432s (float; default: 10.0) 432s flames_obs_scired.drs_base_name: Base name for science 432s products (str; default: 432s 'fxb') 432s flames_obs_scired.drs_maxyshift: Half width of the 432s interval to scan for 432s correlation, when 432s determining y shift 432s (float; default: 3.0) 432s flames_obs_scired.drs_ext_w_siz: Integration window size 432s good: 10 (if fibre 432s deconvolution works 432s fine) (float; default: 432s 10.0) 432s flames_obs_scired.merge: Order merging method. 432s If 'optimal', the flux 432s in the overlapping 432s region is set to the 432s (optimally computed, 432s using the 432s uncertainties) average 432s of single order 432s spectra. If 'sum', the 432s flux in the overlapping 432s region is computed as 432s the sum of the single 432s order spectra. If flat- 432s fielding is done, 432s method 'optimal' is 432s recommended, otherwise 432s 'sum'. (str; default: 432s 'optimal') 432s flames_obs_scired.merge_delt1: Order merging left hand 432s (short wavelength) cut. 432s To reduce the amount of 432s order overlapping 432s regions we allow to cut 432s short and long 432s wavelength ranges. This 432s may reduce the ripple 432s possibly introduced by 432s the order merging. 432s Suggested values are: 432s 10 (W<=390), 12 432s (390=860) 432s (float; default: -1.0) 432s flames_obs_scired.merge_delt2: Order merging right 432s hand (long wavelength) 432s cut. To reduce the 432s amount of order 432s overlapping regions we 432s allow to cut short and 432s long wavelength ranges. 432s This may reduce the 432s ripple possibly 432s introduced by the order 432s merging. Suggested 432s values is 4 for W<860, 432s else 0 (float; default: 432s -1.0) 432s flames_obs_scired.clean_tmp_products: Input data format 432s (bool; default: False) 432s flames_obs_scired.rebin.wavestep: The bin size used for 432s BLUE/REDL data (in 432s w.l.u.) in wavelength 432s space. If negative, a 432s step size of 2/3 * ( 432s average pixel size ) is 432s used. (float; default: 432s -1.0) 432s flames_obs_scired.rebin.wavestep_redu: The bin size used for 432s REDU data (in w.l.u.) 432s in wavelength space. If 432s negative, a step size 432s of 2/3 * ( average 432s pixel size ) is used. 432s (float; default: -1.0) 432s flames_obs_scired.rebin.scale: Whether or not to 432s multiply by the factor 432s dx/dlambda (pixels per 432s wavelength) during the 432s rebinning to conserve 432s the flux. This option 432s is disabled as default 432s because applying the 432s flat field correction 432s already ensures flux 432s conservation. Therefore 432s this parameter should 432s be TRUE (for response 432s and science data) only 432s if reduce.ffmethd = no. 432s (bool; default: False) 432s uves_cal_mbias.clean_traps: Clean detector traps. 432s If TRUE detector traps 432s are interpolated.The 432s bad pixels are replaced 432s by the average of 432s thenearest good pixels 432s in the same column, or 432s simply marked as bad. 432s The positions of bad 432s pixels are hard-coded 432s (as function of UVES 432s chip). (bool; default: 432s False) 432s uves_cal_mbias.stack_method: Method used to build 432s master frame (str; 432s default: 'median') 432s uves_cal_mbias.klow: Kappa used to clip low 432s level values, when 432s method is set to 'mean' 432s (float; default: 5.0) 432s uves_cal_mbias.khigh: Kappa used to clip high 432s level values, when 432s method is set to 'mean' 432s (float; default: 5.0) 432s uves_cal_mbias.niter: Number of kappa sigma 432s iterations, when method 432s is set to 'mean' (int; 432s default: 5) 432s uves_cal_mbias.pd_compute: Determine Fixed Pattern 432s Noise. If TRUE the 432s Fixed Patter Noise 432s power spectrum is 432s determined.(as function 432s of UVES chip). (bool; 432s default: False) 432s uves_cal_mbias.dc_mask_x: x-size (pixel) of the 432s mask starting at (x,y) 432s = (1,1) (int; default: 432s 1) 432s uves_cal_mbias.dc_mask_y: y-size (pixel) of the 432s mask starting at (x,y) 432s = (1,1) (int; default: 432s 1) 432s flames_cal_wavecal.nwindows: Number of extraction 432s windows per trace. The 432s windows will be aligned 432s (i.e. no overlap and no 432s spacing between 432s adjacent windows). 432s Unless an offset is 432s specified, the middle 432s window(s) is centered 432s on the trace (int; 432s default: 1) 432s flames_cal_wavecal.length: Length (in pixels) of 432s each extraction window. 432s This parameter is also 432s equal to the seperation 432s of adjacent window 432s centers, causing the 432s extraction windows to 432s always be aligned. The 432s parameter is 432s automatically adjusted 432s according to the 432s binning of the input 432s raw frame. If negative, 432s the extraction window 432s length is determined 432s automatically to cover 432s the full slit (float; 432s default: 7.0) 432s flames_cal_wavecal.offset: A global offset (in 432s pixels) of all 432s extraction windows 432s (float; default: 0.0) 432s flames_cal_wavecal.range: Width (pix) of search 432s window is 2*range + 1. 432s This parameter is 432s automatically adjusted 432s according to binning. 432s (int; default: 8) 432s flames_cal_wavecal.minlines: Minimum number of lines 432s to detect. If zero, the 432s default value (1100 for 432s BLUE/REDL chips; 1000 432s for REDU chip) is used. 432s (int; default: 0) 432s flames_cal_wavecal.maxlines: Maximum number of lines 432s to detect. If zero, the 432s default value (1600 for 432s BLUE/REDL chip; 1400 432s for REDU chip) is used. 432s (int; default: 0) 432s flames_cal_wavecal.shiftmax: The maximum shift (pix) 432s in either direction 432s compared to guess 432s solution. This 432s parameter is 432s automatically corrected 432s for binning (float; 432s default: 10.0) 432s flames_cal_wavecal.shiftstep: The step size (pix) 432s used when searching for 432s the optimum shift. This 432s parameter is 432s automatically corrected 432s for binning (float; 432s default: 0.1) 432s flames_cal_wavecal.shifttoler: Tolerance (pix) when 432s matching shifted lines. 432s This parameter is not 432s adjusted according to 432s binning (float; 432s default: 0.05) 432s flames_cal_wavecal.alpha: The parameter that 432s controls the distance 432s to the nearest 432s neighbours (float; 432s default: 0.1) 432s flames_cal_wavecal.maxerror: This parameter controls 432s the graceful exit of 432s the identification 432s loop. If the RMS of the 432s global fit exceeds this 432s value (pix) the 432s iteration stops (float; 432s default: 20.0) 432s flames_cal_wavecal.degree: Degrees of the global 432s 2d dispersion 432s polynomial. If a 432s negative number is 432s specified, the 432s polynomial degrees are 432s automatically selected 432s by starting from (1, 1) 432s and inreasing the 432s degrees as long as the 432s RMS residual decreases 432s significantly (int; 432s default: 4) 432s flames_cal_wavecal.tolerance: Tolerance of fit. If 432s positive, the tolerance 432s is in pixel units. If 432s negative, 432s abs(tolerance) is in 432s wavelength units. Lines 432s with residuals worse 432s than the tolerance are 432s excluded from the final 432s fit. Unlike in previous 432s versions, this 432s parameter is not 432s corrected for CCD 432s binning. This rejection 432s based on the absolute 432s residual in pixel can 432s be effectively disabled 432s by setting the 432s tolerance to a very 432s large number (e.g. 432s 9999). In that case 432s outliers will be 432s rejected using only 432s kappa sigma clipping. 432s (float; default: 0.6) 432s flames_cal_wavecal.kappa: Lines with residuals 432s more then kappa stdev 432s are rejected from the 432s final fit (float; 432s default: 4.0) 432s flames_cal_wavecal.extract.method: Extraction method. 432s (2d/optimal not 432s supported by 432s uves_cal_wavecal, 432s weighted supported only 432s by uves_cal_wavecal, 2d 432s not supported by 432s uves_cal_response) 432s (str; default: 432s 'average') 432s flames_cal_wavecal.extract.kappa: In optimal extraction 432s mode, this is the 432s threshold for bad (i.e. 432s hot/cold) pixel 432s rejection. If a pixel 432s deviates more than 432s kappa*sigma (where 432s sigma is the 432s uncertainty of the 432s pixel flux) from the 432s inferred spatial 432s profile, its weight is 432s set to zero. Range: 432s [-1,100]. If this 432s parameter is negative, 432s no rejection is 432s performed. (float; 432s default: 10.0) 432s flames_cal_wavecal.extract.chunk: In optimal extraction 432s mode, the chunk size 432s (in pixels) used for 432s fitting the analytical 432s profile (a fit of the 432s analytical profile to 432s single bins would 432s suffer from low 432s statistics). (int; 432s default: 32) 432s flames_cal_wavecal.extract.profile: In optimal extraction 432s mode, the kind of 432s profile to use. 'gauss' 432s gives a Gaussian 432s profile, 'moffat' gives 432s a Moffat profile with 432s beta=4 and a possible 432s linear sky 432s contribution. 'virtual' 432s uses a virtual 432s resampling algorithm 432s (i.e. measures and uses 432s the actual object 432s profile). 'constant' 432s assumes a constant 432s spatial profile and 432s allows optimal 432s extraction of 432s wavelength calibration 432s frames. 'auto' will 432s automatically select 432s the best method based 432s on the estimated S/N of 432s the object. For low 432s S/N, 'moffat' or 432s 'gauss' are recommended 432s (for robustness). For 432s high S/N, 'virtual' is 432s recommended (for 432s accuracy). In the case 432s of virtual resampling, 432s a precise determination 432s of the order positions 432s is required; therefore 432s the order-definition is 432s repeated using the 432s (assumed non-low S/N) 432s science frame (str; 432s default: 'auto') 432s flames_cal_wavecal.extract.skymethod: In optimal extraction 432s mode, the sky 432s subtraction method to 432s use. 'median' estimates 432s the sky as the median 432s of pixels along the 432s slit (ignoring pixels 432s close to the object), 432s whereas 'optimal' does 432s a chi square 432s minimization along the 432s slit to obtain the best 432s combined object and sky 432s levels. The optimal 432s method gives the most 432s accurate sky 432s determination but is 432s also a bit slower than 432s the median method (str; 432s default: 'optimal') 432s flames_cal_wavecal.extract.oversample: The oversampling factor 432s used for the virtual 432s resampling algorithm. 432s If negative, the value 432s 5 is used for S/N 432s <=200, and the value 10 432s is used if the 432s estimated S/N is > 200 432s (int; default: -1) 432s flames_cal_wavecal.extract.best: (optimal extraction 432s only) If false 432s (fastest), the spectrum 432s is extracted only once. 432s If true (best), the 432s spectrum is extracted 432s twice, the second time 432s using improved variance 432s estimates based on the 432s first iteration. Better 432s variance estimates 432s slightly improve the 432s obtained signal to 432s noise but at the cost 432s of increased execution 432s time (bool; default: 432s True) 432s flames_cal_wavecal.rebin.wavestep: The bin size used for 432s BLUE/REDL data (in 432s w.l.u.) in wavelength 432s space. If negative, a 432s step size of 2/3 * ( 432s average pixel size ) is 432s used. (float; default: 432s -1.0) 432s flames_cal_wavecal.rebin.wavestep_redu: The bin size used for 432s REDU data (in w.l.u.) 432s in wavelength space. If 432s negative, a step size 432s of 2/3 * ( average 432s pixel size ) is used. 432s (float; default: -1.0) 432s flames_cal_wavecal.rebin.scale: Whether or not to 432s multiply by the factor 432s dx/dlambda (pixels per 432s wavelength) during the 432s rebinning to conserve 432s the flux. This option 432s is disabled as default 432s because applying the 432s flat field correction 432s already ensures flux 432s conservation. Therefore 432s this parameter should 432s be TRUE (for response 432s and science data) only 432s if reduce.ffmethd = no. 432s (bool; default: False) 432s flames_cal_prep_sff_ofpos.ext_method: Extraction method (str; 432s default: 'opt') 432s flames_cal_prep_sff_ofpos.bias_method: Bias subtraction 432s method, M for master 432s bias frame, N for no 432s bias subtraction, V to 432s subtract a constant 432s bias level defined by 432s the parameter 432s bias_value (str; 432s default: 'M') 432s flames_cal_prep_sff_ofpos.bias_value: Bias value (only if 432s bias_method = V) (int; 432s default: 200) 432s flames_cal_prep_sff_ofpos.filter_switch: Filter switch (str; 432s default: 'none') 432s flames_cal_prep_sff_ofpos.sat_thr: Saturation threshold 432s (int; default: 55000) 432s flames_cal_prep_sff_ofpos.fileprep: Slitff* and Fibreff* 432s file preparation. If 432s fast extraction method 432s is used it should be 432s set to FALSE (bool; 432s default: True) 432s flames_cal_prep_sff_ofpos.cubify: Cubify switch (bool; 432s default: True) 432s flames_cal_prep_sff_ofpos.save_flat_size: To be sure to use the 432s flat part of a slit 432s flatsone may need to 432s subtract this bit. The 432s default value -1, is 432s used for automatic 432s setting: if WCEN=520 432s save_flat_size=0, else 432s save_flat_size=2. 432s Values explicitly set 432s by user overwrite this 432s rule. (int; default: 432s -1) 432s flames_cal_prep_sff_ofpos.clean_tmp_products: Input data format 432s (bool; default: False)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s 432s Author: Jonas M. Larsen 432s 432s 432s Recipe flames_obs_scired: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'ext_method': 'opt', 'cor_max_fnd': 'Y', 'cor_def_rng': 6.0, 'cor_def_pnt': 25, 'cor_def_off': 0.0, 'corvel_iter': 1, 'bias_method': 'M', 'bias_value': 200, 'cubify_sw': 'N', 'filt_sw': 'none', 'bkg_max_io_win': 500, 'bkg_xy_win_sz_x': 6, 'bkg_xy_win_sz_y': 2, 'pixel_thresh_max': 55000, 'pixel_thresh_min': -20, 'drs_k_s_thre': 10.0, 'drs_base_name': 'fxb', 'drs_maxyshift': 3.0, 'drs_ext_w_siz': 10.0, 'merge': 'optimal', 'merge_delt1': -1.0, 'merge_delt2': -1.0, 'clean_tmp_products': False, 'rebin.wavestep': -1.0, 'rebin.wavestep_redu': -1.0, 'rebin.scale': False} 432s Docstring: Reduces a FLAMES science image 432s 432s Fibre & order position determination procedure: You should feed the 432s recipe with: - science fibre images (FIB_SCI_RED, FIB_SCI_SIM_RED, 432s FIB_SCI_SIM_RED) - single fibre images, FIB_ORDEF_(REDL|REDU) - master 432s bias frames, MASTER_BIAS_(REDL|REDU) - Fibre order table, 432s FIB_ORDEF_TABLE_(REDL|REDU) - Slit flatfield common, 432s SLIT_FF_COM_(REDL|REDU) - Slit flatfield norm, SLIT_FF_NOR_(REDL|REDU) 432s - Slit flatfield data, SLIT_FF_DTC_(REDL|REDU) - Slit flatfield sigma, 432s SLIT_FF_SGC_(REDL|REDU) - Slit flatfield bad pixel, 432s SLIT_FF_BPC_(REDL|REDU) - Slit flatfield boundary, 432s SLIT_FF_BNC_(REDL|REDU) - Fibre flatfield common, 432s FIB_FF_COM_(REDL|REDU) - Fibre flatfield norm, FIB_FF_NOR_(REDL|REDU) 432s - Fibre flatfield norm sigma, FIB_FF_NSG_(REDL|REDU) Products are: - 432s Science fibre info table (FIB_SCI_INFO_TAB) - XB_SCI_RAW_(REDL|REDU) 432s - ERR_XB_SCI_RAW_(REDL|REDU) - WXB_SCI_RAW_(REDL|REDU) - 432s ERR_WXB_SCI_RAW_(REDL|REDU) - MWXB_SCI_RAW_(REDL|REDU) - 432s ERR_MWXB_SCI_RAW_(REDL|REDU) - XB_SCI_(REDL|REDU) - 432s ERR_XB_SCI_(REDL|REDU) - WXB_SCI_(REDL|REDU) - 432s ERR_WXB_SCI_(REDL|REDU) - MWXB_SCI_(REDL|REDU) - 432s ERR_MWXB_SCI_(REDL|REDU) 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer control of 432s the plotting options can be obtained by writing 432s an executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this parameter 432s to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s ext_method: Extraction method (str; default: 'opt') 432s cor_max_fnd: Find correlation maximum? (str; default: 'Y') 432s cor_def_rng: Correlation range size? (float; default: 6.0) 432s cor_def_pnt: Correlation sampling points? (int; default: 25) 432s cor_def_off: Correlation center offset? (float; default: 0.0) 432s corvel_iter: Velocity correlation iteration number (SimCal) 432s (int; default: 1) 432s bias_method: Bias subtraction method (str; default: 'M') 432s bias_value: Bias value (only if bias_method = V) (int; 432s default: 200) 432s cubify_sw: Cubify switch (str; default: 'N') 432s filt_sw: Filter switch (str; default: 'none') 432s bkg_max_io_win: Background window number in each full inter 432s order (int; default: 500) 432s bkg_xy_win_sz_x: x maximum size of each background window: (int; 432s default: 6) 432s bkg_xy_win_sz_y: y maximum size of each background window: (int; 432s default: 2) 432s pixel_thresh_max: Pixel saturation threshold max (int; default: 432s 55000) 432s pixel_thresh_min: Pixel saturation threshold min (int; default: 432s -20) 432s drs_k_s_thre: Kappa sigma threshold (float; default: 10.0) 432s drs_base_name: Base name for science products (str; default: 432s 'fxb') 432s drs_maxyshift: Half width of the interval to scan for 432s correlation, when determining y shift (float; 432s default: 3.0) 432s drs_ext_w_siz: Integration window size good: 10 (if fibre 432s deconvolution works fine) (float; default: 10.0) 432s merge: Order merging method. If 'optimal', the flux in 432s the overlapping region is set to the (optimally 432s computed, using the uncertainties) average of 432s single order spectra. If 'sum', the flux in the 432s overlapping region is computed as the sum of the 432s single order spectra. If flat-fielding is done, 432s method 'optimal' is recommended, otherwise 432s 'sum'. (str; default: 'optimal') 432s merge_delt1: Order merging left hand (short wavelength) cut. 432s To reduce the amount of order overlapping 432s regions we allow to cut short and long 432s wavelength ranges. This may reduce the ripple 432s possibly introduced by the order merging. 432s Suggested values are: 10 (W<=390), 12 432s (390=860) (float; default: -1.0) 432s merge_delt2: Order merging right hand (long wavelength) cut. 432s To reduce the amount of order overlapping 432s regions we allow to cut short and long 432s wavelength ranges. This may reduce the ripple 432s possibly introduced by the order merging. 432s Suggested values is 4 for W<860, else 0 (float; 432s default: -1.0) 432s clean_tmp_products: Input data format (bool; default: False) 432s rebin.wavestep: The bin size used for BLUE/REDL data (in w.l.u.) 432s in wavelength space. If negative, a step size of 432s 2/3 * ( average pixel size ) is used. (float; 432s default: -1.0) 432s rebin.wavestep_redu: The bin size used for REDU data (in w.l.u.) in 432s wavelength space. If negative, a step size of 432s 2/3 * ( average pixel size ) is used. (float; 432s default: -1.0) 432s rebin.scale: Whether or not to multiply by the factor 432s dx/dlambda (pixels per wavelength) during the 432s rebinning to conserve the flux. This option is 432s disabled as default because applying the flat 432s field correction already ensures flux 432s conservation. Therefore this parameter should be 432s TRUE (for response and science data) only if 432s reduce.ffmethd = no. (bool; default: False) 432s Author: Andrea Modigliani 432s 432s 432s Recipe flames_utl_unpack: 432s version 6.1.8 432s Parameters: {} 432s Docstring: Unpack flames-uves packed frames 432s 432s This recipe unpack flames-uves packed products. Information on 432s relevant parameters can be found with esorex --params 432s flames_utl_unpack esorex --help flames_utl_unpack 432s 432s No parameters 432s Author: Andrea Modigliani 432s 432s 432s Recipe uves_cal_cd_align: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'steps': 100, 'xborder': 200, 'window': 50} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Docstring: Measures the reproducability of the cross disperser positioning 432s 432s Given two input frames (CD_ALIGN_xxx where xxx = BLUE or RED) which 432s contain only one echelle order, this recipe measures the shift in the 432s cross-dispersion direction of that order. For RED input frames, only 432s the lower chip is processed. The recipe produces a 432s CD_ALIGN_TABLE_xxxx (with xxxx = BLUE or REDL) with columns X: 432s Column number YCENi: Centroid from Gaussian fit (for i = 1,2) 432s SIGMAi: Stdev from Gaussian fit BACKi: Constant background from 432s Gaussian fit NORMi: Normalization constant from Gaussian fit 432s YDIFF: Difference YCEN2 - YCEN1 of centroid positions and the QC- 432s parameters ESO.QC.YDIFF(AVG|MED|RMS), which are the average, median 432s and root-mean-square of the y-shift, respectively. 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to the 432s command specified by this parameter. The plotting 432s command must contain the substring 'gnuplot' and must 432s be able to parse gnuplot syntax on its standard input. 432s Valid examples of such a command may include 'gnuplot 432s -persist' and 'cat > mygnuplot$$.gp'. A finer control 432s of the plotting options can be obtained by writing an 432s executable script, e.g. my_gnuplot.pl, that executes 432s gnuplot after setting the desired gnuplot options (e.g. 432s set terminal pslatex color). To turn off plotting, set 432s this parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s steps: Step size in pixels (int; default: 100) 432s xborder: Exclude a border region of this size (pixels) (int; 432s default: 200) 432s window: The half window height used for Gaussian fitting (int; 432s default: 50) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_mbias: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'clean_traps': False, 'stack_method': 'median', 'klow': 5.0, 'khigh': 5.0, 'niter': 5, 'pd_compute': False, 'dc_mask_x': 1, 'dc_mask_y': 1} 432s Docstring: Creates the master bias frame 432s 432s This recipe creates a master bias frame by computing the median of all 432s input bias frames. All input frames must have same tag and size and 432s must be either BIAS_BLUE or BIAS_RED. On blue input the recipe 432s computes one master bias frame; on red input a master bias frame for 432s each chip is produced. The average, standard deviation and median of 432s the master bias image(s) are written to the FITS header(s) 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to the 432s command specified by this parameter. The plotting 432s command must contain the substring 'gnuplot' and must 432s be able to parse gnuplot syntax on its standard input. 432s Valid examples of such a command may include 'gnuplot 432s -persist' and 'cat > mygnuplot$$.gp'. A finer control 432s of the plotting options can be obtained by writing an 432s executable script, e.g. my_gnuplot.pl, that executes 432s gnuplot after setting the desired gnuplot options (e.g. 432s set terminal pslatex color). To turn off plotting, set 432s this parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s clean_traps: Clean detector traps. If TRUE detector traps are 432s interpolated.The bad pixels are replaced by the average 432s of thenearest good pixels in the same column, or simply 432s marked as bad. The positions of bad pixels are hard- 432s coded (as function of UVES chip). (bool; default: 432s False) 432s stack_method: Method used to build master frame (str; default: 432s 'median') 432s klow: Kappa used to clip low level values, when method is set 432s to 'mean' (float; default: 5.0) 432s khigh: Kappa used to clip high level values, when method is 432s set to 'mean' (float; default: 5.0) 432s niter: Number of kappa sigma iterations, when method is set to 432s 'mean' (int; default: 5) 432s pd_compute: Determine Fixed Pattern Noise. If TRUE the Fixed Patter 432s Noise power spectrum is determined.(as function of UVES 432s chip). (bool; default: False) 432s dc_mask_x: x-size (pixel) of the mask starting at (x,y) = (1,1) 432s (int; default: 1) 432s dc_mask_y: y-size (pixel) of the mask starting at (x,y) = (1,1) 432s (int; default: 1) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_mdark: 432s version 6.1.8 432s Parameters: {'stack_method': 'median', 'klow': 5.0, 'khigh': 5.0, 'niter': 5, 'debug': False, 'plotter': 'no', 'process_chip': 'both', 'qc_dark.reg.num_x': 4, 'qc_dark.reg.num_y': 4, 'qc_dark.reg.box_sx': 100, 'qc_dark.reg.box_sy': 100, 'qc_dark.reg.border_x': 100, 'qc_dark.reg.border_y': 100, 'qc_dark.reg.when': 0} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s Docstring: Creates the master dark frame 432s 432s This recipe creates a master dark frame by taking the median of all 432s input frames which should have identical exposure times. Symbolically, 432s masterdark = median( dark_i ) - masterbias The input dark frames must 432s have same tag and size and must be either (P)DARK_BLUE or (P)DARK_RED. 432s Also, a master bias (MASTER_BIAS_xxxx) must be provided for each chip 432s (xxxx = BLUE, REDL, REDU). On blue input the recipe computes one 432s master dark frame; on red input the recipe produces a master dark 432s frame for each chip (MASTER_(P)DARK_xxxx). 432s 432s Parameters: 432s stack_method: Method used to build master frame (str; 432s default: 'median') 432s klow: Kappa used to clip low level values, when 432s method is set to 'mean' (float; default: 5.0) 432s khigh: Kappa used to clip high level values, when 432s method is set to 'mean' (float; default: 5.0) 432s niter: Number of kappa sigma iterations, when method 432s is set to 'mean' (int; default: 5) 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer control of 432s the plotting options can be obtained by writing 432s an executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this 432s parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or 432s both chip(s) (str; default: 'both') 432s stack_method: Method used to build master frame (str; 432s default: 'median') 432s klow: Kappa used to clip low level values, when 432s method is set to 'mean' (float; default: 5.0) 432s khigh: Kappa used to clip high level values, when 432s method is set to 'mean' (float; default: 5.0) 432s niter: Number of kappa sigma iterations, when method 432s is set to 'mean' (int; default: 5) 432s qc_dark.reg.num_x: Number of regions along the X axis (where 432s mean/med/rms are computed). (int; default: 4) 432s qc_dark.reg.num_y: Number of regions along the Y axis(where 432s mean/med/rms are computed). (int; default: 4) 432s qc_dark.reg.box_sx: Region X size [pix] (int; default: 100) 432s qc_dark.reg.box_sy: Region Y size [pix] (int; default: 100) 432s qc_dark.reg.border_x: X distance between the left hand side of the 432s detector and the left hand side of the region 432s [pix] (int; default: 100) 432s qc_dark.reg.border_y: X distance between the left hand side of the 432s detector and the left hand side of the region 432s [pix] (int; default: 100) 432s qc_dark.reg.when: When QC analysis is performed. 0: on each raw 432s frame or 1: on the master frame (int; default: 432s 0) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_mflat: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'norm_method': 'explevel', 'backsub.mmethod': 'median', 'backsub.npoints': 82, 'backsub.radiusy': 2, 'backsub.sdegree': 1, 'backsub.smoothx': -1.0, 'backsub.smoothy': -1.0} 432s Docstring: Creates the master flat field frame 432s 432s This recipe creates a master flat frame by 1) subtracting the master 432s bias frame from each flat field frame, 2) dividing each flat field 432s frame by the exposure time for that frame, 3) taking the median of 432s all bias subtracted, normalized raw flat frames, 4) optionally 432s subtracting the master dark frame, and 5) subtracting the background 432s to get the bias subtracted, optionally dark subtracted, normalized, 432s background subtracted master flat-field frame. Symbolically, 432s masterflat = median( (flat_i - masterbias)/exptime_i ) - 432s masterdark/exptime - background. The input flat field 432s frames must have same tag which must match 432s (I|D|S|T|SCREEN|)FLAT_(BLUE|RED), for example TFLAT_BLUE or FLAT_RED. 432s Also, a master bias (MASTER_BIAS_xxxx) and ordertable 432s (ORDER_TABLE_xxxx) must be provided for each chip (xxxx = BLUE, REDL, 432s REDU). A master dark frame (MASTER_(P)DARK_xxxx) may optionally be 432s provided. On blue input the recipe computes one master flat field 432s frame; on red input the recipe produces a master flat field frame for 432s each chip (MASTER_FLAT_xxxx, MASTER_IFLAT_xxxx, MASTER_DFLAT_xxxx, 432s MASTER_TFLAT_xxxx or MASTER_SCREEN_FLAT_xxxx). 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to 432s the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot syntax 432s on its standard input. Valid examples of such a 432s command may include 'gnuplot -persist' and 'cat > 432s mygnuplot$$.gp'. A finer control of the plotting 432s options can be obtained by writing an executable 432s script, e.g. my_gnuplot.pl, that executes gnuplot 432s after setting the desired gnuplot options (e.g. set 432s terminal pslatex color). To turn off plotting, set 432s this parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s norm_method: Method used to build master frame (str; default: 432s 'explevel') 432s backsub.mmethod: Background measuring method. If equal to 'median' 432s the background is sampled using the median of a 432s subwindow. If 'minimum', the subwindow minimum value 432s is used. If 'no', no background subtraction is done. 432s (str; default: 'median') 432s backsub.npoints: This is the number of columns in interorder space 432s used to sample the background. (int; default: 82) 432s backsub.radiusy: The height (in pixels) of the background sampling 432s window is (2*radiusy + 1). This parameter is not 432s corrected for binning. (int; default: 2) 432s backsub.sdegree: Degree of interpolating splines. Currently only 432s degree = 1 is supported (int; default: 1) 432s backsub.smoothx: If spline interpolation is used to measure the 432s background, the x-radius of the post-smoothing 432s window is (smoothx * image_width). Here, 432s 'image_width' is the image width after binning. If 432s negative, the default values are used: (25.0/4096) 432s for blue flat-field frames, (50.0/4096) for red 432s flat-field frames, (300.0/4096) for blue science 432s frames and (300.0/4096) for red science frames. 432s (float; default: -1.0) 432s backsub.smoothy: If spline interpolation is used to measure the 432s background, the y-radius of the post-smoothing 432s window is (smoothy * image_height). Here, 432s 'image_height' is the image height after binning. If 432s negative, the default values are used: (100.0/2048) 432s for blue flat-field frames, (300.0/2048) for red 432s flat-field frames, (200.0/2048) for blue science 432s frames and (500.0/2048) for red science frames. 432s (float; default: -1.0) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_mflat_combine: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'order_threshold': 7} 432s Docstring: Combines the master flat field and the master dflat frames 432s 432s This recipe combined a MASTER_FLAT_xxxx with a MASTER_DFLAT_xxxx Input 432s are: a master flat (MASTER_FLAT_xxxx) a master dflat 432s (MASTER_DFLAT_xxxx) an order table (ORDER_TABLE_xxxx) provided for 432s each chip (xxxx = BLUE, REDL, REDU). Output is a MASTER_FLAT_xxxx 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to 432s the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot syntax 432s on its standard input. Valid examples of such a 432s command may include 'gnuplot -persist' and 'cat > 432s mygnuplot$$.gp'. A finer control of the plotting 432s options can be obtained by writing an executable 432s script, e.g. my_gnuplot.pl, that executes gnuplot 432s after setting the desired gnuplot options (e.g. set 432s terminal pslatex color). To turn off plotting, set 432s this parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s order_threshold: Order where master flats are joined (int; default: 432s 7) 432s Author: Andrea Modigliani 432s 432s 432s Recipe uves_cal_mkmaster: 432s version 6.1.8 432s Parameters: {'stack_method': 'median', 'klow': 5.0, 'khigh': 5.0, 'niter': 5, 'debug': False, 'plotter': 'no', 'process_chip': 'both', 'clean_traps': False, 'norm_method': 'explevel', 'qc_dark.reg.num_x': 4, 'qc_dark.reg.num_y': 4, 'qc_dark.reg.box_sx': 100, 'qc_dark.reg.box_sy': 100, 'qc_dark.reg.border_x': 100, 'qc_dark.reg.border_y': 100, 'qc_dark.reg.when': 0, 'backsub.mmethod': 'median', 'backsub.npoints': 82, 'backsub.radiusy': 2, 'backsub.sdegree': 1, 'backsub.smoothx': -1.0, 'backsub.smoothy': -1.0} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Docstring: Creates the master bias/dark/flat frame 432s 432s This recipe calls uves_cal_mbias if any raw BIAS frame is provided 432s otherwise uves_cal_mdark if any raw DARK frame is provided, otherwise 432s it calls uves_cal_mflat Pls refer to those recipes for more details 432s 432s Parameters: 432s stack_method: Method used to build master frame (str; 432s default: 'median') 432s klow: Kappa used to clip low level values, when 432s method is set to 'mean' (float; default: 5.0) 432s khigh: Kappa used to clip high level values, when 432s method is set to 'mean' (float; default: 5.0) 432s niter: Number of kappa sigma iterations, when method 432s is set to 'mean' (int; default: 5) 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer control of 432s the plotting options can be obtained by writing 432s an executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this 432s parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or 432s both chip(s) (str; default: 'both') 432s stack_method: Method used to build master frame (str; 432s default: 'median') 432s klow: Kappa used to clip low level values, when 432s method is set to 'mean' (float; default: 5.0) 432s khigh: Kappa used to clip high level values, when 432s method is set to 'mean' (float; default: 5.0) 432s niter: Number of kappa sigma iterations, when method 432s is set to 'mean' (int; default: 5) 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer control of 432s the plotting options can be obtained by writing 432s an executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this 432s parameter to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or 432s both chip(s) (str; default: 'both') 432s clean_traps: Clean detector traps. If TRUE detector traps 432s are interpolated.The bad pixels are replaced by 432s the average of thenearest good pixels in the 432s same column, or simply marked as bad. The 432s positions of bad pixels are hard-coded (as 432s function of UVES chip). (bool; default: False) 432s norm_method: Method used to build master frame (str; 432s default: 'explevel') 432s qc_dark.reg.num_x: Number of regions along the X axis (where 432s mean/med/rms are computed). (int; default: 4) 432s qc_dark.reg.num_y: Number of regions along the Y axis(where 432s mean/med/rms are computed). (int; default: 4) 432s qc_dark.reg.box_sx: Region X size [pix] (int; default: 100) 432s qc_dark.reg.box_sy: Region Y size [pix] (int; default: 100) 432s qc_dark.reg.border_x: X distance between the left hand side of the 432s detector and the left hand side of the region 432s [pix] (int; default: 100) 432s qc_dark.reg.border_y: X distance between the left hand side of the 432s detector and the left hand side of the region 432s [pix] (int; default: 100) 432s qc_dark.reg.when: When QC analysis is performed. 0: on each raw 432s frame or 1: on the master frame (int; default: 432s 0) 432s backsub.mmethod: Background measuring method. If equal to 432s 'median' the background is sampled using the 432s median of a subwindow. If 'minimum', the 432s subwindow minimum value is used. If 'no', no 432s background subtraction is done. (str; default: 432s 'median') 432s backsub.npoints: This is the number of columns in interorder 432s space used to sample the background. (int; 432s default: 82) 432s backsub.radiusy: The height (in pixels) of the background 432s sampling window is (2*radiusy + 1). This 432s parameter is not corrected for binning. (int; 432s default: 2) 432s backsub.sdegree: Degree of interpolating splines. Currently only 432s degree = 1 is supported (int; default: 1) 432s backsub.smoothx: If spline interpolation is used to measure the 432s background, the x-radius of the post-smoothing 432s window is (smoothx * image_width). Here, 432s 'image_width' is the image width after binning. 432s If negative, the default values are used: 432s (25.0/4096) for blue flat-field frames, 432s (50.0/4096) for red flat-field frames, 432s (300.0/4096) for blue science frames and 432s (300.0/4096) for red science frames. (float; 432s default: -1.0) 432s backsub.smoothy: If spline interpolation is used to measure the 432s background, the y-radius of the post-smoothing 432s window is (smoothy * image_height). Here, 432s 'image_height' is the image height after 432s binning. If negative, the default values are 432s used: (100.0/2048) for blue flat-field frames, 432s (300.0/2048) for red flat-field frames, 432s (200.0/2048) for blue science frames and 432s (500.0/2048) for red science frames. (float; 432s default: -1.0) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_orderpos: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'use_guess_tab': 1, 'radx': 2, 'rady': 1, 'mmethod': 'median', 'backsubgrid': 50, 'backsubradiusy': 2, 'backsubkappa': 4.0, 'backsubdegx': 2, 'backsubdegy': 2, 'samplewidth': 50, 'minslope': 0.0, 'maxslope': 0.2, 'sloperes': 120, 'pthres': 0.2, 'tracestep': 10, 'minthresh': 0.2, 'maxgap': 0.2, 'maxrms': 100.0, 'defpol1': -1, 'defpol2': -1, 'kappa': 4.0} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Docstring: Defines echelle order positions 432s 432s The recipe defines the order positions in an echelle image. The orders 432s are initially detected by means of a Hough transformation, the orders 432s are then traced, and the positions are finally fitted with a global 432s polynomial. Expected input frames are narrow flat fields, 432s ORDER_FLAT_xxx, or standard stars, STANDARD_xxx, where xxx is 'BLUE' 432s or 'RED', and optionally for each chip a DRS setup table 432s (DRS_TABLE_BLUE, DRS_TABLE_REDL, DRS_TABLE_REDU) or guess order table 432s (ORDER_GUESS_TAB_BLUE, ORDER_GUESS_TAB_REDL, ORDER_GUESS_TAB_REDU, 432s or, for backward compatibility, ORDER_TABLE_BLUE, ORDER_TABLE_REDL, 432s ORDER_TABLE_REDU). The recipe processes only the first raw frame 432s found. Output is one (or two if input is a red frame) order table(s) 432s (UVES: ORDER_TABLE_(BLUE|REDL|REDU); FLAMES: FIB_ORDEF_(REDL|REDU) 432s contaning the columns: X : Position along x Order 432s : Relative order number Y : Order line centroid 432s location Yfit : The fitted order location dY 432s : Uncertainty of Y dYfit_Square : Variance of Yfit Residual 432s : Y - Yfit Residual_Square : Residual^2 OrderRMS : Root mean 432s squared residual of initial one-dimensional linear 432s fit of order The bivariate fit polynomial itself is stored in table 432s extension no. 2. The 3rd table extension contains a table that defines 432s the active fibre traces and their positions (for support of 432s FLAMES/UVES) 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to local 432s directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected to 432s the command specified by this parameter. The plotting 432s command must contain the substring 'gnuplot' and must 432s be able to parse gnuplot syntax on its standard 432s input. Valid examples of such a command may include 432s 'gnuplot -persist' and 'cat > mygnuplot$$.gp'. A 432s finer control of the plotting options can be obtained 432s by writing an executable script, e.g. my_gnuplot.pl, 432s that executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex color). To 432s turn off plotting, set this parameter to 'no' (str; 432s default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s use_guess_tab: If a Guess order table is provided this parameter set 432s how it is used:0: No usage, 1: use it to set 432s lower/upper Y raws where order are searched 2: the 432s order table try to fully match the guess (int; 432s default: 1) 432s radx: Half X size of median filtering window (int; default: 432s 2) 432s rady: Half Y size of median filtering window (int; default: 432s 1) 432s mmethod: Background subtraction method. If equal to 'median' 432s the background is sampled using the median of a sub- 432s window. If 'minimum', the minimum sub-window value is 432s used. If 'no', no background subtraction is done. 432s (str; default: 'median') 432s backsubgrid: Number of grid points (in x- and y-direction) used to 432s estimate the background (mode=poly). (int; default: 432s 50) 432s backsubradiusy: The height (in pixels) of the background sampling 432s window is (2*radiusy + 1). This parameter is not 432s corrected for binning. (int; default: 2) 432s backsubkappa: The value of kappa in the one-sided kappa-sigma 432s clipping used to estimate the background (mode=poly). 432s (float; default: 4.0) 432s backsubdegx: Degree (in x) of polynomial used to estimate the 432s background (mode=poly). (int; default: 2) 432s backsubdegy: Degree (in y) of polynomial used to estimate the 432s background (mode=poly). (int; default: 2) 432s samplewidth: Separation of sample traces (used by Hough transform) 432s in input image (int; default: 50) 432s minslope: Minimum possible line slope. This should be the 432s 'physical' slope on the chip, i.e. not taking binning 432s factors into account, which is handled by the recipe 432s (float; default: 0.0) 432s maxslope: Maximum possible line slope (float; default: 0.2) 432s sloperes: Resolution (width in pixels) of Hough space (int; 432s default: 120) 432s pthres: In automatic mode, or if the number of orders to 432s detect is read from a guess table, the detection of 432s new lines stops when the intensity of a candidate 432s line drops to less than 'pthres' times the intensity 432s of the previous detection. (float; default: 0.2) 432s tracestep: The step size used when tracing the orders (int; 432s default: 10) 432s minthresh: The minimum threshold value is (min + minthres*(max - 432s min)). Here 'min' and 'max' are the lowest and 432s highest pixel values in the central bin of the order 432s (float; default: 0.2) 432s maxgap: If the order line drops below detection threshold, 432s the order tracing algorithm will try to jump a gap of 432s maximum size 'maxgap' multiplied by the image width 432s (float; default: 0.2) 432s maxrms: When fitting the orders with straight lines, this is 432s the maximum allowed RMS relative to the median RMS of 432s all orders (float; default: 100.0) 432s defpol1: The degree of the bivarite fit (cross dispersion 432s direction). If negative, the degree is optimized to 432s give the best fit (int; default: -1) 432s defpol2: The degree of the bivarite fit (order number). If 432s negative, the degree is optimized to give the best 432s fit (int; default: -1) 432s kappa: Used for kappa-sigma clipping of the final polynomial 432s fit. If negative, no clipping is done (float; 432s default: 4.0) 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_predict: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'mbox_x': 40, 'mbox_y': 40, 'trans_x': 0.0, 'trans_y': 0.0, 'ech_angle_off': 0.0, 'cd_angle_off': 0.0, 'ccd_rot_angle_off': 0.0, 'compute_regression_sw': True, 'def_pol1': 4, 'def_pol2': 5, 'kappa': 4.5, 'tol': 2.0} 432s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s Docstring: Implements the UVES physical model 432s 432s This recipe implements the UVES physical model Input files are BLUE or 432s RED arm formatcheck frames identified by the tag ARC_LAMP_FORM_xxxx, 432s xxxx=BLUE or RED and a ThAr line reference table identified by the tag 432s LINE_REFER_TABLE The recipe extracts from the input files FITS header 432s data indicating the instrument setting and ambiental atmospheric 432s conditions, then using the model predicts X,Y position of the lines 432s listed in the LINE_REFER_TABLE table which are imaging on the detector 432s and stores this information in an guess order and a guess line table. 432s Output are a guess order table and a guess line table per chip. If the 432s user provides in input also master format checks having tag 432s MASTER_FORM_xxxx, xxxx=BLUE or REDL and REDU the recipe performs also 432s a stability check 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are 432s redirected to the command specified by this 432s parameter. The plotting command must contain 432s the substring 'gnuplot' and must be able to 432s parse gnuplot syntax on its standard input. 432s Valid examples of such a command may include 432s 'gnuplot -persist' and 'cat > mygnuplot$$.gp'. 432s A finer control of the plotting options can be 432s obtained by writing an executable script, e.g. 432s my_gnuplot.pl, that executes gnuplot after 432s setting the desired gnuplot options (e.g. set 432s terminal pslatex color). To turn off plotting, 432s set this parameter to 'no' (str; default: 432s 'no') 432s process_chip: For RED arm data process the redl, redu, or 432s both chip(s) (str; default: 'both') 432s mbox_x: Match box X size (int; default: 40) 432s mbox_y: Match box Y size (int; default: 40) 432s trans_x: Detector translation along X (float; default: 432s 0.0) 432s trans_y: Detector translation along Y (float; default: 432s 0.0) 432s ech_angle_off: Offset on echelle angle (float; default: 0.0) 432s cd_angle_off: Offset on cross disperser angle (float; 432s default: 0.0) 432s ccd_rot_angle_off: Offset on CCD rotation angle (float; default: 432s 0.0) 432s compute_regression_sw: Compute regression? (bool; default: True) 432s def_pol1: Polynomial X deg (int; default: 4) 432s def_pol2: Polynomial Y deg (int; default: 5) 432s kappa: Kappa value in kappa sigma clipping on 432s RESIDUAL between YFIT and Y columns (float; 432s default: 4.5) 432s tol: Tolerance in kappa sigma clipping on RESIDUAL 432s between YFIT and Y columns (float; default: 432s 2.0) 432s Author: Andrea Modigliani 432s 432s 432s Recipe uves_cal_response: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'paccuracy': 60.0, 'efficiency.reduce.ffmethod': 'no', 'efficiency.reduce.merge': 'sum', 'efficiency.reduce.best': True, 'efficiency.reduce.extract.method': 'linear', 'reduce.slitlength': -1.0, 'reduce.skysub': True, 'reduce.objoffset': 0.0, 'reduce.objslit': -1.0, 'reduce.tiltcorr': True, 'reduce.ffmethod': 'extract', 'reduce.merge': 'optimal', 'reduce.merge_delt1': 0.0, 'reduce.merge_delt2': 0.0, 'reduce.extract.method': 'optimal', 'reduce.extract.kappa': 10.0, 'reduce.extract.chunk': 32, 'reduce.extract.profile': 'auto', 'reduce.extract.skymethod': 'optimal', 'reduce.extract.oversample': -1, 'reduce.extract.best': True, 'reduce.backsub.mmethod': 'median', 'reduce.backsub.npoints': 82, 'reduce.backsub.radiusy': 2, 'reduce.backsub.sdegree': 1, 'reduce.backsub.smoothx': -1.0, 'reduce.backsub.smoothy': -1.0, 'reduce.rebin.wavestep': -1.0, 'reduce.rebin.wavestep_redu': -1.0, 'reduce.rebin.scale': False} 432s Docstring: Determines response function and quantum efficiency 432s 432s This recipe reduces a standard star frame (STANDARD_xxx or 432s STANDARD_xxx, where xxx = BLUE, RED) using a combination (depending on 432s recipe parameters and provided input frames) of the steps: - bias 432s subtraction, - dark subtraction, - background subtraction, - 432s extraction/cosmic ray removal, - flat-field correction, - 432s wavelength rebinning, - sky subtraction, - order merging. 432s Expected input for this recipe is an raw std star frame, STANDARD_xxx 432s or order table(s) for each chip, ORDER_TABLE_xxxx (where xxxx=BLUE, 432s REDL, REDU), line table(s) for each chip, LINE_TABLE_xxxx, a master 432s bias frame, MASTER_BIAS_xxxx, a master flat, MASTER_FLAT_xxxx, a 432s reference standard star flux table, FLUX_STD_TABLE, a table describing 432s the atmospheric extintion, EXTCOEFF_TABLE, and the catalog indicating 432s points to fit the response, RESP_FIT_POINTS_CATALOG. Two reductions 432s are performed, the first using optimal extraction (used to compute the 432s instrument response function), the second using linear extraction 432s (used to get the Quantum Detection Efficiency) For each chip (xxxx = 432s BLUE, REDL, REDU) the recipe produces INSTR_RESPONSE_FINE_xxxx 432s Response curve RED_STD_xxxx Reduced spectrum 432s EFFICIENCY_TABLE_xxxx Efficiency table BKG_STD_xxxx 432s The subtracted background 432s 432s Parameters: 432s debug: Whether or not to save intermediate 432s results to local directory (bool; 432s default: False) 432s plotter: Any plots produced by the recipe 432s are redirected to the command 432s specified by this parameter. The 432s plotting command must contain the 432s substring 'gnuplot' and must be 432s able to parse gnuplot syntax on its 432s standard input. Valid examples of 432s such a command may include 'gnuplot 432s -persist' and 'cat > 432s mygnuplot$$.gp'. A finer control of 432s the plotting options can be 432s obtained by writing an executable 432s script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the 432s desired gnuplot options (e.g. set 432s terminal pslatex color). To turn 432s off plotting, set this parameter to 432s 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, 432s redu, or both chip(s) (str; 432s default: 'both') 432s paccuracy: The pointing accuracy (in 432s arcseconds) used to identify the 432s observed star with a catalogue 432s star. If the angular separation is 432s less than this number, the 432s identification is made. (float; 432s default: 60.0) 432s efficiency.reduce.ffmethod: Flat-fielding method. If set to 432s 'pixel', flat-fielding is done in 432s pixel-pixel space (before 432s extraction); if set to 'extract', 432s flat- fielding is performed in 432s pixel-order space (i.e. after 432s extraction). If set to 'no', no 432s flat-field correction is done, in 432s which case reduce.rebin.scale 432s should be set to true to ensure 432s flux conservation (both for 432s response and science data). (str; default: 432s 'no') 432s efficiency.reduce.merge: Order merging method. If 'optimal', 432s the flux in the overlapping region 432s is set to the (optimally computed, 432s using the uncertainties) average of 432s single order spectra. If 'sum', the 432s flux in the overlapping region is 432s computed as the sum of the single 432s order spectra.If 'noappend' the 432s spectrum is simply rebinned but not 432s merged.If flat-fielding is done, 432s method 'optimal' is recommended, 432s otherwise 'sum'. (str; default: 'sum') 432s efficiency.reduce.best: (optimal extraction only) If false 432s (fastest), the spectrum is 432s extracted only once. If true 432s (best), the spectrum is extracted 432s twice, the second time using 432s improved variance estimates based 432s on the first iteration. Better 432s variance estimates slightly improve 432s the obtained signal to noise but at 432s the cost of increased execution 432s time (bool; default: True) 432s efficiency.reduce.extract.method: Extraction method. (str; 432s default: 'linear') 432s reduce.slitlength: Extraction slit length (in pixels). 432s If negative, the value inferred 432s from the raw frame header is used 432s (float; default: -1.0) 432s reduce.skysub: Do sky-subtraction (only applicable 432s to linear and average extractions)? 432s (bool; default: True) 432s reduce.objoffset: Offset (in pixels) of extraction 432s slit with respect to center of 432s order. For optimal extraction the 432s full slit is offset. For 432s linear/average extraction, 432s reduce.objoffset is ignored if 432s reduce.objslit [default -1.0] is 432s negative. In this case the offset 432s is automatically determined by 432s measuring the actual object 432s position. (float; default: 0.0) 432s reduce.objslit: Object window size (in pixels), 432s ignored for optimal extraction. The 432s value must be smaller than the 432s total slit length. If negative, the 432s default value (half of full slit 432s length) is used. The upper and 432s lower sky windows are defined as 432s the part of the full slit (if any) 432s outside the object window. The 432s center of the object window is 432s determined by the offset parameter. 432s (float; default: -1.0) 432s reduce.tiltcorr: If enabled (recommended), the 432s provided dispersion solutions 432s obtained at different slit 432s positions are interpolated linearly 432s at the actually measured position 432s of the object/sky. Line tilt 432s correction is currently not 432s supported for 2d extraction, in 432s which case the dispersion solution 432s obtained at the middle of the slit 432s is always used. (bool; default: 432s True) 432s reduce.ffmethod: Flat-fielding method. If set to 432s 'pixel', flat-fielding is done in 432s pixel-pixel space (before 432s extraction); if set to 'extract', 432s flat- fielding is performed in 432s pixel-order space (i.e. after 432s extraction). If set to 'no', no 432s flat-field correction is done, in 432s which case reduce.rebin.scale 432s should be set to true to ensure 432s flux conservation (both for 432s response and science data) (str; 432s default: 'extract') 432s reduce.merge: Order merging method. If 'optimal', 432s the flux in the overlapping region 432s is set to the (optimally computed, 432s using the uncertainties) average of 432s single order spectra. If 'sum', the 432s flux in the overlapping region is 432s computed as the sum of the single 432s order spectra. If 'noappend' the 432s spectrum is simply rebinned but not 432s merged.If flat-fielding is done, 432s method 'optimal' is recommended, 432s otherwise 'sum'. (str; default: 432s 'optimal') 432s reduce.merge_delt1: Order merging left hand (short 432s wavelength) cut. To reduce the 432s amount of order overlapping regions 432s we allow to cut short and long 432s wavelength ranges. This may reduce 432s the ripple possibly introduced by 432s the order merging. Suggested values 432s are: 10 (W<=390), 12 (390 200 432s (int; default: -1) 432s reduce.extract.best: (optimal extraction only) If false 432s (fastest), the spectrum is 432s extracted only once. If true 432s (best), the spectrum is extracted 432s twice, the second time using 432s improved variance estimates based 432s on the first iteration. Better 432s variance estimates slightly improve 432s the obtained signal to noise but at 432s the cost of increased execution 432s time (bool; default: True) 432s reduce.backsub.mmethod: Background measuring method. If 432s equal to 'median' the background is 432s sampled using the median of a 432s subwindow. If 'minimum', the 432s subwindow minimum value is used. If 432s 'no', no background subtraction is 432s done. (str; default: 'median') 432s reduce.backsub.npoints: This is the number of columns in 432s interorder space used to sample the 432s background. (int; default: 82) 432s reduce.backsub.radiusy: The height (in pixels) of the 432s background sampling window is 432s (2*radiusy + 1). This parameter is 432s not corrected for binning. (int; 432s default: 2) 432s reduce.backsub.sdegree: Degree of interpolating splines. 432s Currently only degree = 1 is 432s supported (int; default: 1) 432s reduce.backsub.smoothx: If spline interpolation is used to 432s measure the background, the 432s x-radius of the post-smoothing 432s window is (smoothx * image_width). 432s Here, 'image_width' is the image 432s width after binning. If negative, 432s the default values are used: 432s (25.0/4096) for blue flat-field 432s frames, (50.0/4096) for red flat- 432s field frames, (300.0/4096) for blue 432s science frames and (300.0/4096) for 432s red science frames. (float; 432s default: -1.0) 432s reduce.backsub.smoothy: If spline interpolation is used to 432s measure the background, the 432s y-radius of the post-smoothing 432s window is (smoothy * image_height). 432s Here, 'image_height' is the image 432s height after binning. If negative, 432s the default values are used: 432s (100.0/2048) for blue flat-field 432s frames, (300.0/2048) for red flat- 432s field frames, (200.0/2048) for blue 432s science frames and (500.0/2048) for 432s red science frames. (float; 432s default: -1.0) 432s reduce.rebin.wavestep: The bin size used for BLUE/REDL 432s data (in w.l.u.) in wavelength 432s space. If negative, a step size of 432s 2/3 * ( average pixel size ) is 432s used. (float; default: -1.0) 432s reduce.rebin.wavestep_redu: The bin size used for REDU data (in 432s w.l.u.) in wavelength space. If 432s negative, a step size of 2/3 * ( 432s average pixel size ) is used. 432s (float; default: -1.0) 432s reduce.rebin.scale: Whether or not to multiply by the 432s factor dx/dlambda (pixels per 432s wavelength) during the rebinning to 432s conserve the flux. This option is 432s disabled as default because 432s applying the flat field correction 432s already ensures flux conservation. 432s Therefore this parameter should be 432s TRUE (for response and science 432s data) only if reduce.ffmethd = no. 432s (bool; default: False)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_tflat 432s 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_tflat: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'clean_traps': False, 'norm_method': 'explevel', 'backsub.mmethod': 'median', 'backsub.npoints': 82, 'backsub.radiusy': 2, 'backsub.sdegree': 1, 'backsub.smoothx': -1.0, 'backsub.smoothy': -1.0, 'reduce.slitlength': -1.0, 'reduce.skysub': False, 'reduce.objoffset': 0.0, 'reduce.objslit': -1.0, 'reduce.tiltcorr': True, 'reduce.ffmethod': 'extract', 'reduce.merge': 'optimal', 'reduce.merge_delt1': 0.0, 'reduce.merge_delt2': 0.0, 'reduce.extract.method': 'average', 'reduce.extract.kappa': 10.0, 'reduce.extract.chunk': 32, 'reduce.extract.profile': 'auto', 'reduce.extract.skymethod': 'optimal', 'reduce.extract.oversample': -1, 'reduce.extract.best': True, 'reduce.backsub.mmethod': 'median', 'reduce.backsub.npoints': 82, 'reduce.backsub.radiusy': 2, 'reduce.backsub.sdegree': 1, 'reduce.backsub.smoothx': -1.0, 'reduce.backsub.smoothy': -1.0, 'reduce.rebin.wavestep': -1.0, 'reduce.rebin.wavestep_redu': -1.0, 'reduce.rebin.scale': False} 432s Docstring: Reduces a TFLAT frame 432s 432s This recipe reduces a TFLAT_xxx frame (xxx = BLUE,RED). This is 432s achieved by 1) combining all provided TFLAT frames to a MASTER_TFLAT 432s frame, then 2) doing a normal science reduction on the first input 432s TFLAT frame Input frames are raw TFLAT_xxx frames, and: order 432s table(s) for each chip, ORDER_TABLE_xxxx (where xxxx=BLUE, REDL, 432s REDU), line table(s) for each chip, LINE_TABLE_xxxx, a master bias 432s frame, MASTER_BIAS_xxxx, a master flat, MASTER_FLAT_xxxx, 432s 432s Parameters: 432s debug: Whether or not to save intermediate 432s results to local directory (bool; 432s default: False) 432s plotter: Any plots produced by the recipe are 432s redirected to the command specified by 432s this parameter. The plotting command must 432s contain the substring 'gnuplot' and must 432s be able to parse gnuplot syntax on its 432s standard input. Valid examples of such a 432s command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer 432s control of the plotting options can be 432s obtained by writing an executable script, 432s e.g. my_gnuplot.pl, that executes gnuplot 432s after setting the desired gnuplot options 432s (e.g. set terminal pslatex color). To 432s turn off plotting, set this parameter to 432s 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, 432s or both chip(s) (str; default: 'both') 432s clean_traps: Clean detector traps. If TRUE detector 432s traps are interpolated.The bad pixels are 432s replaced by the average of thenearest 432s good pixels in the same column, or simply 432s marked as bad. The positions of bad 432s pixels are hard-coded (as function of 432s UVES chip). (bool; default: False) 432s norm_method: Method used to build master frame (str; 432s default: 'explevel') 432s backsub.mmethod: Background measuring method. If equal to 432s 'median' the background is sampled using 432s the median of a subwindow. If 'minimum', 432s the subwindow minimum value is used. If 432s 'no', no background subtraction is done. 432s (str; default: 'median') 432s backsub.npoints: This is the number of columns in 432s interorder space used to sample the 432s background. (int; default: 82) 432s backsub.radiusy: The height (in pixels) of the background 432s sampling window is (2*radiusy + 1). This 432s parameter is not corrected for binning. 432s (int; default: 2) 432s backsub.sdegree: Degree of interpolating splines. 432s Currently only degree = 1 is supported 432s (int; default: 1) 432s backsub.smoothx: If spline interpolation is used to 432s measure the background, the x-radius of 432s the post-smoothing window is (smoothx * 432s image_width). Here, 'image_width' is the 432s image width after binning. If negative, 432s the default values are used: (25.0/4096) 432s for blue flat-field frames, (50.0/4096) 432s for red flat-field frames, (300.0/4096) 432s for blue science frames and (300.0/4096) 432s for red science frames. (float; default: 432s -1.0) 432s backsub.smoothy: If spline interpolation is used to 432s measure the background, the y-radius of 432s the post-smoothing window is (smoothy * 432s image_height). Here, 'image_height' is 432s the image height after binning. If 432s negative, the default values are used: 432s (100.0/2048) for blue flat-field frames, 432s (300.0/2048) for red flat-field frames, 432s (200.0/2048) for blue science frames and 432s (500.0/2048) for red science frames. 432s (float; default: -1.0) 432s reduce.slitlength: Extraction slit length (in pixels). If 432s negative, the value inferred from the raw 432s frame header is used (float; default: 432s -1.0) 432s reduce.skysub: Do sky-subtraction (only applicable to 432s linear and average extractions)? (bool; 432s default: False) 432s reduce.objoffset: Offset (in pixels) of extraction slit 432s with respect to center of order. For 432s optimal extraction the full slit is 432s offset. For linear/average extraction, 432s reduce.objoffset is ignored if 432s reduce.objslit [default -1.0] is 432s negative. In this case the offset is 432s automatically determined by measuring the 432s actual object position. (float; default: 432s 0.0) 432s reduce.objslit: Object window size (in pixels), ignored 432s for optimal extraction. The value must be 432s smaller than the total slit length. If 432s negative, the default value (half of full 432s slit length) is used. The upper and lower 432s sky windows are defined as the part of 432s the full slit (if any) outside the object 432s window. The center of the object window 432s is determined by the offset parameter. 432s (float; default: -1.0) 432s reduce.tiltcorr: If enabled (recommended), the provided 432s dispersion solutions obtained at 432s different slit positions are interpolated 432s linearly at the actually measured 432s position of the object/sky. Line tilt 432s correction is currently not supported for 432s 2d extraction, in which case the 432s dispersion solution obtained at the 432s middle of the slit is always used. (bool; 432s default: True) 432s reduce.ffmethod: Flat-fielding method. If set to 'pixel', 432s flat-fielding is done in pixel-pixel 432s space (before extraction); if set to 432s 'extract', flat- fielding is performed in 432s pixel-order space (i.e. after 432s extraction). If set to 'no', no flat- 432s field correction is done, in which case 432s reduce.rebin.scale should be set to true 432s to ensure flux conservation (both for 432s response and science data) (str; default: 432s 'extract') 432s reduce.merge: Order merging method. If 'optimal', the 432s flux in the overlapping region is set to 432s the (optimally computed, using the 432s uncertainties) average of single order 432s spectra. If 'sum', the flux in the 432s overlapping region is computed as the sum 432s of the single order spectra. If 432s 'noappend' the spectrum is simply 432s rebinned but not merged.If flat-fielding 432s is done, method 'optimal' is recommended, 432s otherwise 'sum'. (str; default: 432s 'optimal') 432s reduce.merge_delt1: Order merging left hand (short 432s wavelength) cut. To reduce the amount of 432s order overlapping regions we allow to cut 432s short and long wavelength ranges. This 432s may reduce the ripple possibly introduced 432s by the order merging. Suggested values 432s are: 10 (W<=390), 12 (390 200 (int; default: -1) 432s reduce.extract.best: (optimal extraction only) If false 432s (fastest), the spectrum is extracted only 432s once. If true (best), the spectrum is 432s extracted twice, the second time using 432s improved variance estimates based on the 432s first iteration. Better variance 432s estimates slightly improve the obtained 432s signal to noise but at the cost of 432s increased execution time (bool; default: 432s True) 432s reduce.backsub.mmethod: Background measuring method. If equal to 432s 'median' the background is sampled using 432s the median of a subwindow. If 'minimum', 432s the subwindow minimum value is used. If 432s 'no', no background subtraction is done. 432s (str; default: 'median') 432s reduce.backsub.npoints: This is the number of columns in 432s interorder space used to sample the 432s background. (int; default: 82) 432s reduce.backsub.radiusy: The height (in pixels) of the background 432s sampling window is (2*radiusy + 1). This 432s parameter is not corrected for binning. 432s (int; default: 2) 432s reduce.backsub.sdegree: Degree of interpolating splines. 432s Currently only degree = 1 is supported 432s (int; default: 1) 432s reduce.backsub.smoothx: If spline interpolation is used to 432s measure the background, the x-radius of 432s the post-smoothing window is (smoothx * 432s image_width). Here, 'image_width' is the 432s image width after binning. If negative, 432s the default values are used: (25.0/4096) 432s for blue flat-field frames, (50.0/4096) 432s for red flat-field frames, (300.0/4096) 432s for blue science frames and (300.0/4096) 432s for red science frames. (float; default: 432s -1.0) 432s reduce.backsub.smoothy: If spline interpolation is used to 432s measure the background, the y-radius of 432s the post-smoothing window is (smoothy * 432s image_height). Here, 'image_height' is 432s the image height after binning. If 432s negative, the default values are used: 432s (100.0/2048) for blue flat-field frames, 432s (300.0/2048) for red flat-field frames, 432s (200.0/2048) for blue science frames and 432s (500.0/2048) for red science frames. 432s (float; default: -1.0) 432s reduce.rebin.wavestep: The bin size used for BLUE/REDL data (in 432s w.l.u.) in wavelength space. If negative, 432s a step size of 2/3 * ( average pixel size 432s ) is used. (float; default: -1.0) 432s reduce.rebin.wavestep_redu: The bin size used for REDU data (in 432s w.l.u.) in wavelength space. If negative, 432s a step size of 2/3 * ( average pixel size 432s ) is used. (float; default: -1.0) 432s reduce.rebin.scale: Whether or not to multiply by the factor 432s dx/dlambda (pixels per wavelength) during 432s the rebinning to conserve the flux. This 432s option is disabled as default because 432s applying the flat field correction 432s already ensures flux conservation. 432s Therefore this parameter should be TRUE 432s (for response and science data) only if 432s reduce.ffmethd = no. (bool; default: 432s False)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s 432s Author: Jonas M. Larsen 432s 432s 432s Recipe uves_cal_wavecal: 432s version 6.1.8 432s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'nwindows': 3, 'length': -1.0, 'offset': 0.0, 'range': 8, 'minlines': 0, 'maxlines': 0, 'shiftmax': 10.0, 'shiftstep': 0.1, 'shifttoler': 0.05, 'alpha': 0.1, 'maxerror': 20.0, 'degree': 4, 'tolerance': 0.6, 'kappa': 4.0, 'extract.method': 'average', 'extract.kappa': 10.0, 'extract.chunk': 32, 'extract.profile': 'auto', 'extract.skymethod': 'optimal', 'extract.oversample': -1, 'extract.best': True, 'rebin.wavestep': -1.0, 'rebin.wavestep_redu': -1.0, 'rebin.scale': False} 432s Docstring: Performs the wavelength calibration 432s 432s The recipe performs a wavelength calibration for each extraction 432s window. Conceptually, each chip contains a number of order lines, each 432s of which contains a number of fibre traces, each of which contains a 432s number of extraction windows. For UVES data, there is only one trace 432s per order and three extraction windows (sky, object, sky). For 432s FLAMES/UVES data there are multiple traces per order but only one 432s extraction window per trace. The number of traces is defined in the 432s order table while the geometry of the extraction windows is specified 432s by recipe parameters (see below). Expected input for this recipe is 432s an arc lamp frame, ARC_LAMP_xxx or ECH_ARC_LAMP_xxx (where xxx=BLUE, 432s RED), order table(s) for each chip, ORDER_TABLE_xxxx (where xxxx=BLUE, 432s REDL, REDU), 'guess' line table(s) for each chip, LINE_TABLE_xxxx, a 432s wavelength catalogue table, LINE_REFER_TABLE, and optionally a 432s wavelength table of bright lines, LINE_INTMON_TABLE, used only for 432s computing Quality Control parameters. The output line table(s), 432s LINE_TABLE_xxxx, contains the columns X : Horizontal 432s position (from Gaussian fit) of detected line dX : 432s Uncertainty (one sigma) of X Ynew : Vertical position of 432s detected line XWidth : Width (in pixels) of detected line from 432s Gaussian fit Peak : Intensity of detected line Background : 432s Fitted background (ADU) of detected line Slope : Linear 432s background slope (ADU/pixel) of detected line from 432s Gaussian fit Intensity : Intensity of detected line scaled to unit 432s exposure time. (This column only present if a 432s LINE_INTMON_TABLE is provided.) Order : Absolute 432s order number of detected line Y : Relative order number of 432s detected line (it's not a very descriptive column name) 432s WaveC : Wavelength of this line (computed using the resulting 432s dispersion relation) dLambdaC : Uncertainty (one sigma) of 432s 'WaveC'. Pixel : The width in w.l.u. of a pixel (computed 432s locally). Residual : Residual (in w.l.u.) of this line 432s Residual_pix : Residual (in pixels) of this line Lambda_candidate : 432s Nearest line in catalogue dLambda_cat_sq : Squared distance to 432s nearest catalogue line dLambda_nn_sq : Squared distance to nearest 432s neighbour multiplied by ALPHA Ident : The wavelength associated 432s with this emission line, or invalid if this line was 432s not identified dIdent : Uncertainty of catalogue wavelength 432s Select : 1 if the line was identified, 0 otherwise NLinSol 432s : 1 if the line was identified and accepted for the 432s polynomial fit, 0 otherwise Intensity : Intensity of detected line 432s scaled to unit exposure time. (This column is present 432s only if a LINE_INTMON_TABLE is provided.) The 2nd 432s table extension contains the dispersion relation (a 2d polynomial). 432s The 3rd table extension contains the map from (pixel, pixel)-space to 432s physical order numbers (used internally by the calibration recipe; 432s another 2d polynomial). If there is more than one extraction window, 432s the results of each calibration is stored in subsequent table 432s extensions of the same FITS file. For example, extensions 4, 5 and 6 432s would contain the resulting line table (and its two associated 432s polynomials) for the second extraction window. The results for the 432s calibration of the n'th extraction window is stored in extensions 432s (3*n - 2) to 3*n. 432s 432s Parameters: 432s debug: Whether or not to save intermediate results to 432s local directory (bool; default: False) 432s plotter: Any plots produced by the recipe are redirected 432s to the command specified by this parameter. The 432s plotting command must contain the substring 432s 'gnuplot' and must be able to parse gnuplot 432s syntax on its standard input. Valid examples of 432s such a command may include 'gnuplot -persist' 432s and 'cat > mygnuplot$$.gp'. A finer control of 432s the plotting options can be obtained by writing 432s an executable script, e.g. my_gnuplot.pl, that 432s executes gnuplot after setting the desired 432s gnuplot options (e.g. set terminal pslatex 432s color). To turn off plotting, set this parameter 432s to 'no' (str; default: 'no') 432s process_chip: For RED arm data process the redl, redu, or both 432s chip(s) (str; default: 'both') 432s nwindows: Number of extraction windows per trace. The 432s windows will be aligned (i.e. no overlap and no 432s spacing between adjacent windows). Unless an 432s offset is specified, the middle window(s) is 432s centered on the trace (int; default: 3) 432s length: Length (in pixels) of each extraction window. 432s This parameter is also equal to the seperation 432s of adjacent window centers, causing the 432s extraction windows to always be aligned. The 432s parameter is automatically adjusted according to 432s the binning of the input raw frame. If negative, 432s the extraction window length is determined 432s automatically to cover the full slit (float; 432s default: -1.0) 432s offset: A global offset (in pixels) of all extraction 432s windows (float; default: 0.0) 432s range: Width (pix) of search window is 2*range + 1. 432s This parameter is automatically adjusted 432s according to binning. (int; default: 8) 432s minlines: Minimum number of lines to detect. If zero, the 432s default value (1100 for BLUE/REDL chips; 1000 432s for REDU chip) is used. (int; default: 0) 432s maxlines: Maximum number of lines to detect. If zero, the 432s default value (1600 for BLUE/REDL chip; 1400 for 432s REDU chip) is used. (int; default: 0) 432s shiftmax: The maximum shift (pix) in either direction 432s compared to guess solution. This parameter is 432s automatically corrected for binning (float; 432s default: 10.0) 432s shiftstep: The step size (pix) used when searching for the 432s optimum shift. This parameter is automatically 432s corrected for binning (float; default: 0.1) 432s shifttoler: Tolerance (pix) when matching shifted lines. 432s This parameter is not adjusted according to 432s binning (float; default: 0.05) 432s alpha: The parameter that controls the distance to the 432s nearest neighbours (float; default: 0.1) 432s maxerror: This parameter controls the graceful exit of the 432s identification loop. If the RMS of the global 432s fit exceeds this value (pix) the iteration stops 432s (float; default: 20.0) 432s degree: Degrees of the global 2d dispersion polynomial. 432s If a negative number is specified, the 432s polynomial degrees are automatically selected by 432s starting from (1, 1) and inreasing the degrees 432s as long as the RMS residual decreases 432s significantly (int; default: 4) 432s tolerance: Tolerance of fit. If positive, the tolerance is 432s in pixel units. If negative, abs(tolerance) is 432s in wavelength units. Lines with residuals worse 432s than the tolerance are excluded from the final 432s fit. Unlike in previous versions, this parameter 432s is not corrected for CCD binning. This rejection 432s based on the absolute residual in pixel can be 432s effectively disabled by setting the tolerance to 432s a very large number (e.g. 9999). In that case 432s outliers will be rejected using only kappa sigma 432s clipping. (float; default: 0.6) 432s kappa: Lines with residuals more then kappa stdev are 432s rejected from the final fit (float; default: 432s 4.0) 432s extract.method: Extraction method. (2d/optimal not supported by 432s uves_cal_wavecal, weighted supported only by 432s uves_cal_wavecal, 2d not supported by 432s uves_cal_response) (str; default: 'average') 432s extract.kappa: In optimal extraction mode, this is the 432s threshold for bad (i.e. hot/cold) pixel 432s rejection. If a pixel deviates more than 432s kappa*sigma (where sigma is the uncertainty of 432s the pixel flux) from the inferred spatial 432s profile, its weight is set to zero. Range: 432s [-1,100]. If this parameter is negative, no 432s rejection is performed. (float; default: 10.0) 432s extract.chunk: In optimal extraction mode, the chunk size (in 432s pixels) used for fitting the analytical profile 432s (a fit of the analytical profile to single bins 432s would suffer from low statistics). (int; 432s default: 32) 432s extract.profile: In optimal extraction mode, the kind of profile 432s to use. 'gauss' gives a Gaussian profile, 432s 'moffat' gives a Moffat profile with beta=4 and 432s a possible linear sky contribution. 'virtual' 432s uses a virtual resampling algorithm (i.e. 432s measures and uses the actual object profile). 432s 'constant' assumes a constant spatial profile 432s and allows optimal extraction of wavelength 432s calibration frames. 'auto' will automatically 432s select the best method based on the estimated 432s S/N of the object. For low S/N, 'moffat' or 432s 'gauss' are recommended (for robustness). For 432s high S/N, 'virtual' is recommended (for 432s accuracy). In the case of virtual resampling, a 432s precise determination of the order positions is 432s required; therefore the order-definition is 432s repeated using the (assumed non-low S/N) science 432s frame (str; default: 'auto') 432s extract.skymethod: In optimal extraction mode, the sky subtraction 432s method to use. 'median' estimates the sky as the 432s median of pixels along the slit (ignoring pixels 432s close to the object), whereas 'optimal' does a 432s chi square minimization along the slit to obtain 432s the best combined object and sky levels. The 432s optimal method gives the most accurate sky 432s determination but is also a bit slower than the 432s median method (str; default: 'optimal') 432s extract.oversample: The oversampling factor used for the virtual 432s resampling algorithm. If negative, the value 5 432s is used for S/N <=200, and the value 10 is used 432s if the estimated S/N is > 200 (int; default: -1) 432s extract.best: (optimal extraction only) If false (fastest), 432s the spectrum is extracted only once. If true 432s (best), the spectrum is extracted twice, the 432s second time using improved variance estimates 432s based on the first iteration. Better variance 432s estimates slightly improve the obtained signal 432s to noise but at the cost of increased execution 432s time (bool; default: True) 432s rebin.wavestep: The bin size used for BLUE/REDL data (in w.l.u.) 432s in wavelength space. If negative, a step size of 432s 2/3 * ( average pixel size ) is used. (float; 432s default: -1.0) 432s rebin.wavestep_redu: The bin size used for REDU data (in w.l.u.) in 432s wavelength space. If negative, a step size of 432s 2/3 * ( average pixel size ) is used. (float; 432s default: -1.0) 432s rebin.scale: Whether or not to multiply by the factor 432s dx/dlambda (pixels per wavelength) during the 432s rebinning to conserve the flux. This option is 432s disabled as default because applying the flat 432s field correction already ensures flux 432s conservation. Therefore this parameter should be 432s TRUE (for response and science data) only if 432s reduce.ffmethd = no. (bool; default: False)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 432s [ INFO ] recipe id flames_cal_mkmaster 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] recipe id uves_cal_mkmaster 432s [ INFO ] recipe id uves_cal_tflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 432s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 432s [ INFO ] recipe id uves_cal_mflat 433s 433s Author: Jonas M. Larsen 433s 433s 433s Recipe uves_obs_redchain: 433s version 6.1.8 433s Parameters: {'scired': True, 'debug': False, 'plotter': 'no', 'process_chip': 'both', 'uves_cal_response.reduce.slitlength': -1.0, 'uves_cal_response.reduce.skysub': True, 'uves_cal_response.reduce.objoffset': 0.0, 'uves_cal_response.reduce.objslit': -1.0, 'uves_cal_response.reduce.tiltcorr': True, 'uves_cal_response.reduce.ffmethod': 'extract', 'uves_cal_response.reduce.merge': 'optimal', 'uves_cal_response.reduce.merge_delt1': 0.0, 'uves_cal_response.reduce.merge_delt2': 0.0, 'uves_cal_response.reduce.rebin.wavestep': -1.0, 'uves_cal_response.reduce.rebin.wavestep_redu': -1.0, 'uves_cal_response.reduce.rebin.scale': False, 'uves_cal_response.reduce.extract.method': 'optimal', 'uves_cal_response.reduce.extract.kappa': 10.0, 'uves_cal_response.reduce.extract.chunk': 32, 'uves_cal_response.reduce.extract.profile': 'auto', 'uves_cal_response.reduce.extract.skymethod': 'optimal', 'uves_cal_response.reduce.extract.oversample': -1, 'uves_cal_response.reduce.extract.best': True, 'uves_cal_response.reduce.backsub.mmethod': 'median', 'uves_cal_response.reduce.backsub.npoints': 82, 'uves_cal_response.reduce.backsub.radiusy': 2, 'uves_cal_response.reduce.backsub.sdegree': 1, 'uves_cal_response.reduce.backsub.smoothx': -1.0, 'uves_cal_response.reduce.backsub.smoothy': -1.0, 'uves_cal_response.efficiency.paccuracy': 60.0, 'uves_cal_response.efficiency.reduce.ffmethod': 'no', 'uves_cal_response.efficiency.reduce.merge': 'sum', 'uves_cal_response.efficiency.reduce.best': True, 'uves_cal_response.efficiency.reduce.extract.method': 'linear', 'uves_cal_predict.mbox_x': 40, 'uves_cal_predict.mbox_y': 40, 'uves_cal_predict.trans_x': 0.0, 'uves_cal_predict.trans_y': 0.0, 'uves_cal_predict.ech_angle_off': 0.0, 'uves_cal_predict.cd_angle_off': 0.0, 'uves_cal_predict.ccd_rot_angle_off': 0.0, 'uves_cal_predict.compute_regression_sw': True, 'uves_cal_predict.def_pol1': 4, 'uves_cal_predict.def_pol2': 5, 'uves_cal_predict.kappa': 4.5, 'uves_cal_predict.tol': 2.0, 'uves_cal_mdark.stack_method': 'median', 'uves_cal_mdark.klow': 5.0, 'uves_cal_mdark.khigh': 5.0, 'uves_cal_mdark.niter': 5, 'uves_cal_mdark.qc_dark.reg.num_x': 4, 'uves_cal_mdark.qc_dark.reg.num_y': 4, 'uves_cal_mdark.qc_dark.reg.box_sx': 100, 'uves_cal_mdark.qc_dark.reg.box_sy': 100, 'uves_cal_mdark.qc_dark.reg.border_x': 100, 'uves_cal_mdark.qc_dark.reg.border_y': 100, 'uves_cal_mdark.qc_dark.reg.when': 0, 'uves_cal_wavecal.nwindows': 3, 'uves_cal_wavecal.length': -1.0, 'uves_cal_wavecal.offset': 0.0, 'uves_cal_wavecal.range': 8, 'uves_cal_wavecal.minlines': 0, 'uves_cal_wavecal.maxlines': 0, 'uves_cal_wavecal.shiftmax': 10.0, 'uves_cal_wavecal.shiftstep': 0.1, 'uves_cal_wavecal.shifttoler': 0.05, 'uves_cal_wavecal.alpha': 0.1, 'uves_cal_wavecal.maxerror': 20.0, 'uves_cal_wavecal.degree': 4, 'uves_cal_wavecal.tolerance': 0.6, 'uves_cal_wavecal.kappa': 4.0, 'uves_cal_wavecal.extract.method': 'average', 'uves_cal_wavecal.extract.kappa': 10.0, 'uves_cal_wavecal.extract.chunk': 32, 'uves_cal_wavecal.extract.profile': 'auto', 'uves_cal_wavecal.extract.skymethod': 'optimal', 'uves_cal_wavecal.extract.oversample': -1, 'uves_cal_wavecal.extract.best': True, 'uves_cal_wavecal.rebin.wavestep': -1.0, 'uves_cal_wavecal.rebin.wavestep_redu': -1.0, 'uves_cal_wavecal.rebin.scale': False, 'uves_cal_mflat.norm_method': 'explevel', 'uves_cal_mflat.backsub.mmethod': 'median', 'uves_cal_mflat.backsub.npoints': 82, 'uves_cal_mflat.backsub.radiusy': 2, 'uves_cal_mflat.backsub.sdegree': 1, 'uves_cal_mflat.backsub.smoothx': -1.0, 'uves_cal_mflat.backsub.smoothy': -1.0, 'uves_obs_scired.clean_traps': False, 'uves_obs_scired.reduce.slitlength': -1.0, 'uves_obs_scired.reduce.skysub': True, 'uves_obs_scired.reduce.objoffset': 0.0, 'uves_obs_scired.reduce.objslit': -1.0, 'uves_obs_scired.reduce.tiltcorr': True, 'uves_obs_scired.reduce.ffmethod': 'extract', 'uves_obs_scired.reduce.merge': 'optimal', 'uves_obs_scired.reduce.merge_delt1': 0.0, 'uves_obs_scired.reduce.merge_delt2': 0.0, 'uves_obs_scired.reduce.backsub.mmethod': 'median', 'uves_obs_scired.reduce.backsub.npoints': 82, 'uves_obs_scired.reduce.backsub.radiusy': 2, 'uves_obs_scired.reduce.backsub.sdegree': 1, 'uves_obs_scired.reduce.backsub.smoothx': -1.0, 'uves_obs_scired.reduce.backsub.smoothy': -1.0, 'uves_obs_scired.reduce.extract.method': 'optimal', 'uves_obs_scired.reduce.extract.kappa': 10.0, 'uves_obs_scired.reduce.extract.chunk': 32, 'uves_obs_scired.reduce.extract.profile': 'auto', 'uves_obs_scired.reduce.extract.skymethod': 'optimal', 'uves_obs_scired.reduce.extract.oversample': -1, 'uves_obs_scired.reduce.extract.best': True, 'uves_obs_scired.reduce.rebin.wavestep': -1.0, 'uves_obs_scired.reduce.rebin.wavestep_redu': -1.0, 'uves_obs_scired.reduce.rebin.scale': False, 'uves_cal_mbias.clean_traps': False, 'uves_cal_mbias.stack_method': 'median', 'uves_cal_mbias.klow': 5.0, 'uves_cal_mbias.khigh': 5.0, 'uves_cal_mbias.niter': 5, 'uves_cal_mbias.pd_compute': False, 'uves_cal_mbias.dc_mask_x': 1, 'uves_cal_mbias.dc_mask_y': 1, 'uves_cal_orderpos.use_guess_tab': 1, 'uves_cal_orderpos.radx': 2, 'uves_cal_orderpos.rady': 1, 'uves_cal_orderpos.mmethod': 'median', 'uves_cal_orderpos.backsubgrid': 50, 'uves_cal_orderpos.backsubradiusy': 2, 'uves_cal_orderpos.backsubkappa': 4.0, 'uves_cal_orderpos.backsubdegx': 2, 'uves_cal_orderpos.backsubdegy': 2, 'uves_cal_orderpos.samplewidth': 50, 'uves_cal_orderpos.minslope': 0.0, 'uves_cal_orderpos.maxslope': 0.2, 'uves_cal_orderpos.sloperes': 120, 'uves_cal_orderpos.pthres': 0.2, 'uves_cal_orderpos.tracestep': 10, 'uves_cal_orderpos.minthresh': 0.2, 'uves_cal_orderpos.maxgap': 0.2, 'uves_cal_orderpos.maxrms': 100.0, 'uves_cal_orderpos.defpol1': -1, 'uves_cal_orderpos.defpol2': -1, 'uves_cal_orderpos.kappa': 4.0} 433s Docstring: Runs the full UVES reduction chain 433s 433s This recipe does a complete science reduction. It runs all necessary 433s calibration recipes depending on the availability of raw/processed 433s calibration frames. Input frames are all UVES raw and reference 433s frames: formatchecks, ARC_LAMP_FORM_xxxx, xxxx=BLUE or RED, order 433s definition frames, ORDER_FLAT_xxx, biases, BIAS_xxx, darks, DARK_xxx, 433s flats, FLAT_xxx, arc lamps, ARC_LAMP_xxx, standard stars, STANDARD_xxx 433s a wavelength catalogue table,LINE_REFER_TABLE, and optionally a 433s wavelength table of bright lines,LINE_INTMON_TABLE, used only for 433s computing Quality Control parameters. a reference standard star flux 433s table, FLUX_STD_TABLE, a table describing the atmospheric 433s extintion,EXTCOEFF_TABLE. optionally, science frames, SCIENCE_xxx, or 433s UVES_SCI_POINT_xxx, or UVES_SCI_EXTND_xxx, or UVES_SCI_SLICER_xxx. 433s For further details on the data reduction and the input frame types 433s refer to the man page of the individual recipes. 433s 433s Parameters: 433s scired: Whether or not to 433s do science 433s reduction. If 433s false, only 433s master 433s calibration 433s frames are 433s created. If 433s false, either 433s zero or all 433s necessary 433s calibration 433s frames must be 433s provided for each 433s arm (bool; 433s default: True) 433s debug: Whether or not to 433s save intermediate 433s results to local 433s directory (bool; 433s default: False) 433s plotter: Any plots 433s produced by the 433s recipe are 433s redirected to the 433s command specified 433s by this 433s parameter. The 433s plotting command 433s must contain the 433s substring 433s 'gnuplot' and 433s must be able to 433s parse gnuplot 433s syntax on its 433s standard input. 433s Valid examples of 433s such a command 433s may include 433s 'gnuplot 433s -persist' and 433s 'cat > 433s mygnuplot$$.gp'. 433s A finer control 433s of the plotting 433s options can be 433s obtained by 433s writing an 433s executable 433s script, e.g. 433s my_gnuplot.pl, 433s that executes 433s gnuplot after 433s setting the 433s desired gnuplot 433s options (e.g. set 433s terminal pslatex 433s color). To turn 433s off plotting, set 433s this parameter to 433s 'no' (str; 433s default: 'no') 433s process_chip: For RED arm data 433s process the redl, 433s redu, or both 433s chip(s) (str; 433s default: 'both') 433s uves_cal_response.reduce.slitlength: Extraction slit 433s length (in 433s pixels). If 433s negative, the 433s value inferred 433s from the raw 433s frame header is 433s used (float; 433s default: -1.0) 433s uves_cal_response.reduce.skysub: Do sky- 433s subtraction (only 433s applicable to 433s linear and 433s average 433s extractions)? 433s (bool; default: 433s True) 433s uves_cal_response.reduce.objoffset: Offset (in 433s pixels) of 433s extraction slit 433s with respect to 433s center of order. 433s For optimal 433s extraction the 433s full slit is 433s offset. For 433s linear/average 433s extraction, 433s reduce.objoffset 433s is ignored if 433s reduce.objslit 433s [default -1.0] is 433s negative. In this 433s case the offset 433s is automatically 433s determined by 433s measuring the 433s actual object 433s position. (float; 433s default: 0.0) 433s uves_cal_response.reduce.objslit: Object window 433s size (in pixels), 433s ignored for 433s optimal 433s extraction. The 433s value must be 433s smaller than the 433s total slit 433s length. If 433s negative, the 433s default value 433s (half of full 433s slit length) is 433s used. The upper 433s and lower sky 433s windows are 433s defined as the 433s part of the full 433s slit (if any) 433s outside the 433s object window. 433s The center of the 433s object window is 433s determined by the 433s offset parameter. 433s (float; default: 433s -1.0) 433s uves_cal_response.reduce.tiltcorr: If enabled 433s (recommended), 433s the provided 433s dispersion 433s solutions 433s obtained at 433s different slit 433s positions are 433s interpolated 433s linearly at the 433s actually measured 433s position of the 433s object/sky. Line 433s tilt correction 433s is currently not 433s supported for 2d 433s extraction, in 433s which case the 433s dispersion 433s solution obtained 433s at the middle of 433s the slit is 433s always used. 433s (bool; default: 433s True) 433s uves_cal_response.reduce.ffmethod: Flat-fielding 433s method. If set to 433s 'pixel', flat- 433s fielding is done 433s in pixel-pixel 433s space (before 433s extraction); if 433s set to 'extract', 433s flat- fielding is 433s performed in 433s pixel-order space 433s (i.e. after 433s extraction). If 433s set to 'no', no 433s flat-field 433s correction is 433s done, in which 433s case reduce.rebin 433s .scale should be 433s set to true to 433s ensure flux 433s conservation 433s (both for 433s response and 433s science data) 433s (str; default: 433s 'extract') 433s uves_cal_response.reduce.merge: Order merging 433s method. If 433s 'optimal', the 433s flux in the 433s overlapping 433s region is set to 433s the (optimally 433s computed, using 433s the 433s uncertainties) 433s average of single 433s order spectra. If 433s 'sum', the flux 433s in the 433s overlapping 433s region is 433s computed as the 433s sum of the single 433s order spectra. If 433s 'noappend' the 433s spectrum is 433s simply rebinned 433s but not merged.If 433s flat-fielding is 433s done, method 433s 'optimal' is 433s recommended, 433s otherwise 'sum'. 433s (str; default: 433s 'optimal') 433s uves_cal_response.reduce.merge_delt1: Order merging 433s left hand (short 433s wavelength) cut. 433s To reduce the 433s amount of order 433s overlapping 433s regions we allow 433s to cut short and 433s long wavelength 433s ranges. This may 433s reduce the ripple 433s possibly 433s introduced by the 433s order merging. 433s Suggested values 433s are: 10 (W<=390), 433s 12 (390 200 (int; 433s default: -1) 433s uves_cal_response.reduce.extract.best: (optimal 433s extraction only) 433s If false 433s (fastest), the 433s spectrum is 433s extracted only 433s once. If true 433s (best), the 433s spectrum is 433s extracted twice, 433s the second time 433s using improved 433s variance 433s estimates based 433s on the first 433s iteration. Better 433s variance 433s estimates 433s slightly improve 433s the obtained 433s signal to noise 433s but at the cost 433s of increased 433s execution time 433s (bool; default: 433s True) 433s uves_cal_response.reduce.backsub.mmethod: Background 433s measuring method. 433s If equal to 433s 'median' the 433s background is 433s sampled using the 433s median of a 433s subwindow. If 433s 'minimum', the 433s subwindow minimum 433s value is used. If 433s 'no', no 433s background 433s subtraction is 433s done. (str; 433s default: 433s 'median') 433s uves_cal_response.reduce.backsub.npoints: This is the 433s number of columns 433s in interorder 433s space used to 433s sample the 433s background. (int; 433s default: 82) 433s uves_cal_response.reduce.backsub.radiusy: The height (in 433s pixels) of the 433s background 433s sampling window 433s is (2*radiusy + 433s 1). This 433s parameter is not 433s corrected for 433s binning. (int; 433s default: 2) 433s uves_cal_response.reduce.backsub.sdegree: Degree of 433s interpolating 433s splines. 433s Currently only 433s degree = 1 is 433s supported (int; 433s default: 1) 433s uves_cal_response.reduce.backsub.smoothx: If spline 433s interpolation is 433s used to measure 433s the background, 433s the x-radius of 433s the post- 433s smoothing window 433s is (smoothx * 433s image_width). 433s Here, 433s 'image_width' is 433s the image width 433s after binning. If 433s negative, the 433s default values 433s are used: BACKSUB 433s _FLAT_SMOOTHX_BLU 433s E for blue flat- 433s field frames, BAC 433s KSUB_FLAT_SMOOTHX 433s _RED for red 433s flat-field 433s frames, BACKSUB_S 433s CI_SMOOTHX_BLUE 433s for blue science 433s frames and BACKSU 433s B_SCI_SMOOTHX_RED 433s for red science 433s frames. (float; 433s default: -1.0) 433s uves_cal_response.reduce.backsub.smoothy: If spline 433s interpolation is 433s used to measure 433s the background, 433s the y-radius of 433s the post- 433s smoothing window 433s is (smoothy * 433s image_height). 433s Here, 433s 'image_height' is 433s the image height 433s after binning. If 433s negative, the 433s default values 433s are used: BACKSUB 433s _FLAT_SMOOTHY_BLU 433s E for blue flat- 433s field frames, BAC 433s KSUB_FLAT_SMOOTHY 433s _RED for red 433s flat-field 433s frames, BACKSUB_S 433s CI_SMOOTHY_BLUE 433s for blue science 433s frames and BACKSU 433s B_SCI_SMOOTHY_RED 433s for red science 433s frames. (float; 433s default: -1.0) 433s uves_cal_response.efficiency.paccuracy: The pointing 433s accuracy (in 433s arcseconds) used 433s to identify the 433s observed star 433s with a catalogue 433s star. If the 433s angular 433s separation is 433s less than this 433s number, the 433s identification is 433s made. (float; 433s default: 60.0) 433s uves_cal_response.efficiency.reduce.ffmethod: Flat-fielding 433s method. If set to 433s 'pixel', flat- 433s fielding is done 433s in pixel-pixel 433s space (before 433s extraction); if 433s set to 'extract', 433s flat- fielding is 433s performed in 433s pixel-order space 433s (i.e. after 433s extraction). If 433s set to 'no', no 433s flat-field 433s correction is 433s done, in which 433s case reduce.rebin 433s .scale should be 433s set to true to 433s ensure flux 433s conservation 433s (both for 433s response and 433s science data). 433s (str; 433s default: 'no') 433s uves_cal_response.efficiency.reduce.merge: Order merging 433s method. If 433s 'optimal', the 433s flux in the 433s overlapping 433s region is set to 433s the (optimally 433s computed, using 433s the 433s uncertainties) 433s average of single 433s order spectra. If 433s 'sum', the flux 433s in the 433s overlapping 433s region is 433s computed as the 433s sum of the single 433s order spectra.If 433s 'noappend' the 433s spectrum is 433s simply rebinned 433s but not merged.If 433s flat-fielding is 433s done, method 433s 'optimal' is 433s recommended, 433s otherwise 'sum'. 433s (str; 433s default: 'sum') 433s uves_cal_response.efficiency.reduce.best: (optimal 433s extraction only) 433s If false 433s (fastest), the 433s spectrum is 433s extracted only 433s once. If true 433s (best), the 433s spectrum is 433s extracted twice, 433s the second time 433s using improved 433s variance 433s estimates based 433s on the first 433s iteration. Better 433s variance 433s estimates 433s slightly improve 433s the obtained 433s signal to noise 433s but at the cost 433s of increased 433s execution time 433s (bool; default: 433s True) 433s uves_cal_response.efficiency.reduce.extract.method: Extraction 433s method. (str; 433s default: 433s 'linear') 433s uves_cal_predict.mbox_x: Match box X size 433s (int; default: 433s 40) 433s uves_cal_predict.mbox_y: Match box Y size 433s (int; default: 433s 40) 433s uves_cal_predict.trans_x: Detector 433s translation along 433s X (float; 433s default: 0.0) 433s uves_cal_predict.trans_y: Detector 433s translation along 433s Y (float; 433s default: 0.0) 433s uves_cal_predict.ech_angle_off: Offset on echelle 433s angle (float; 433s default: 0.0) 433s uves_cal_predict.cd_angle_off: Offset on cross 433s disperser angle 433s (float; default: 433s 0.0) 433s uves_cal_predict.ccd_rot_angle_off: Offset on CCD 433s rotation angle 433s (float; default: 433s 0.0) 433s uves_cal_predict.compute_regression_sw: Compute 433s regression? 433s (bool; default: 433s True) 433s uves_cal_predict.def_pol1: Polynomial X deg 433s (int; default: 4) 433s uves_cal_predict.def_pol2: Polynomial Y deg 433s (int; default: 5) 433s uves_cal_predict.kappa: Kappa value in 433s kappa sigma 433s clipping on 433s RESIDUAL between 433s YFIT and Y 433s columns (float; 433s default: 4.5) 433s uves_cal_predict.tol: Tolerance in 433s kappa sigma 433s clipping on 433s RESIDUAL between 433s YFIT and Y 433s columns (float; 433s default: 2.0) 433s uves_cal_mdark.stack_method: Method used to 433s build master 433s frame (str; 433s default: 433s 'median') 433s uves_cal_mdark.klow: Kappa used to 433s clip low level 433s values, when 433s method is set to 433s 'mean' (float; 433s default: 5.0) 433s uves_cal_mdark.khigh: Kappa used to 433s clip high level 433s values, when 433s method is set to 433s 'mean' (float; 433s default: 5.0) 433s uves_cal_mdark.niter: Number of kappa 433s sigma iterations, 433s when method is 433s set to 'mean' 433s (int; default: 5) 433s uves_cal_mdark.stack_method: Method used to 433s build master 433s frame (str; 433s default: 433s 'median') 433s uves_cal_mdark.klow: Kappa used to 433s clip low level 433s values, when 433s method is set to 433s 'mean' (float; 433s default: 5.0) 433s uves_cal_mdark.khigh: Kappa used to 433s clip high level 433s values, when 433s method is set to 433s 'mean' (float; 433s default: 5.0) 433s uves_cal_mdark.niter: Number of kappa 433s sigma iterations, 433s when method is 433s set to 'mean' 433s (int; default: 5) 433s uves_cal_mdark.qc_dark.reg.num_x: Number of regions 433s along the X axis 433s (where 433s mean/med/rms are 433s computed). (int; 433s default: 4) 433s uves_cal_mdark.qc_dark.reg.num_y: Number of regions 433s along the Y 433s axis(where 433s mean/med/rms are 433s computed). (int; 433s default: 4) 433s uves_cal_mdark.qc_dark.reg.box_sx: Region X size 433s [pix] (int; 433s default: 100) 433s uves_cal_mdark.qc_dark.reg.box_sy: Region Y size 433s [pix] (int; 433s default: 100) 433s uves_cal_mdark.qc_dark.reg.border_x: X distance 433s between the left 433s hand side of the 433s detector and the 433s left hand side of 433s the region [pix] 433s (int; default: 433s 100) 433s uves_cal_mdark.qc_dark.reg.border_y: X distance 433s between the left 433s hand side of the 433s detector and the 433s left hand side of 433s the region [pix] 433s (int; default: 433s 100) 433s uves_cal_mdark.qc_dark.reg.when: When QC analysis 433s is performed. 0: 433s on each raw frame 433s or 1: on the 433s master frame 433s (int; default: 0) 433s uves_cal_wavecal.nwindows: Number of 433s extraction 433s windows per 433s trace. The 433s windows will be 433s aligned (i.e. no 433s overlap and no 433s spacing between 433s adjacent 433s windows). Unless 433s an offset is 433s specified, the 433s middle window(s) 433s is centered on 433s the trace (int; 433s default: 3) 433s uves_cal_wavecal.length: Length (in 433s pixels) of each 433s extraction 433s window. This 433s parameter is also 433s equal to the 433s seperation of 433s adjacent window 433s centers, causing 433s the extraction 433s windows to always 433s be aligned. The 433s parameter is 433s automatically 433s adjusted 433s according to the 433s binning of the 433s input raw frame. 433s If negative, the 433s extraction window 433s length is 433s determined 433s automatically to 433s cover the full 433s slit (float; 433s default: -1.0) 433s uves_cal_wavecal.offset: A global offset 433s (in pixels) of 433s all extraction 433s windows (float; 433s default: 0.0) 433s uves_cal_wavecal.range: Width (pix) of 433s search window is 433s 2*range + 1. This 433s parameter is 433s automatically 433s adjusted 433s according to 433s binning. (int; 433s default: 8) 433s uves_cal_wavecal.minlines: Minimum number of 433s lines to detect. 433s If zero, the 433s default value 433s (1100 for 433s BLUE/REDL chips; 433s 1000 for REDU 433s chip) is used. 433s (int; default: 0) 433s uves_cal_wavecal.maxlines: Maximum number of 433s lines to detect. 433s If zero, the 433s default value 433s (1600 for 433s BLUE/REDL chip; 433s 1400 for REDU 433s chip) is used. 433s (int; default: 0) 433s uves_cal_wavecal.shiftmax: The maximum shift 433s (pix) in either 433s direction 433s compared to guess 433s solution. This 433s parameter is 433s automatically 433s corrected for 433s binning (float; 433s default: 10.0) 433s uves_cal_wavecal.shiftstep: The step size 433s (pix) used when 433s searching for the 433s optimum shift. 433s This parameter is 433s automatically 433s corrected for 433s binning (float; 433s default: 0.1) 433s uves_cal_wavecal.shifttoler: Tolerance (pix) 433s when matching 433s shifted lines. 433s This parameter is 433s not adjusted 433s according to 433s binning (float; 433s default: 0.05) 433s uves_cal_wavecal.alpha: The parameter 433s that controls the 433s distance to the 433s nearest 433s neighbours 433s (float; default: 433s 0.1) 433s uves_cal_wavecal.maxerror: This parameter 433s controls the 433s graceful exit of 433s the 433s identification 433s loop. If the RMS 433s of the global fit 433s exceeds this 433s value (pix) the 433s iteration stops 433s (float; default: 433s 20.0) 433s uves_cal_wavecal.degree: Degrees of the 433s global 2d 433s dispersion 433s polynomial. If a 433s negative number 433s is specified, the 433s polynomial 433s degrees are 433s automatically 433s selected by 433s starting from (1, 433s 1) and inreasing 433s the degrees as 433s long as the RMS 433s residual 433s decreases 433s significantly 433s (int; default: 4) 433s uves_cal_wavecal.tolerance: Tolerance of fit. 433s If positive, the 433s tolerance is in 433s pixel units. If 433s negative, 433s abs(tolerance) is 433s in wavelength 433s units. Lines with 433s residuals worse 433s than the 433s tolerance are 433s excluded from the 433s final fit. Unlike 433s in previous 433s versions, this 433s parameter is not 433s corrected for CCD 433s binning. This 433s rejection based 433s on the absolute 433s residual in pixel 433s can be 433s effectively 433s disabled by 433s setting the 433s tolerance to a 433s very large number 433s (e.g. 9999). In 433s that case 433s outliers will be 433s rejected using 433s only kappa sigma 433s clipping. (float; 433s default: 0.6) 433s uves_cal_wavecal.kappa: Lines with 433s residuals more 433s then kappa stdev 433s are rejected from 433s the final fit 433s (float; default: 433s 4.0) 433s uves_cal_wavecal.extract.method: Extraction 433s method. 433s (2d/optimal not 433s supported by 433s uves_cal_wavecal, 433s weighted 433s supported only by 433s uves_cal_wavecal, 433s 2d not supported 433s by uves_cal_respo 433s nse) (str; 433s default: 433s 'average') 433s uves_cal_wavecal.extract.kappa: In optimal 433s extraction mode, 433s this is the 433s threshold for bad 433s (i.e. hot/cold) 433s pixel rejection. 433s If a pixel 433s deviates more 433s than kappa*sigma 433s (where sigma is 433s the uncertainty 433s of the pixel 433s flux) from the 433s inferred spatial 433s profile, its 433s weight is set to 433s zero. Range: 433s [-1,100]. If this 433s parameter is 433s negative, no 433s rejection is 433s performed. 433s (float; default: 433s 10.0) 433s uves_cal_wavecal.extract.chunk: In optimal 433s extraction mode, 433s the chunk size 433s (in pixels) used 433s for fitting the 433s analytical 433s profile (a fit of 433s the analytical 433s profile to single 433s bins would suffer 433s from low 433s statistics). 433s (int; default: 433s 32) 433s uves_cal_wavecal.extract.profile: In optimal 433s extraction mode, 433s the kind of 433s profile to use. 433s 'gauss' gives a 433s Gaussian profile, 433s 'moffat' gives a 433s Moffat profile 433s with beta=4 and a 433s possible linear 433s sky contribution. 433s 'virtual' uses a 433s virtual 433s resampling 433s algorithm (i.e. 433s measures and uses 433s the actual object 433s profile). 433s 'constant' 433s assumes a 433s constant spatial 433s profile and 433s allows optimal 433s extraction of 433s wavelength 433s calibration 433s frames. 'auto' 433s will 433s automatically 433s select the best 433s method based on 433s the estimated S/N 433s of the object. 433s For low S/N, 433s 'moffat' or 433s 'gauss' are 433s recommended (for 433s robustness). For 433s high S/N, 433s 'virtual' is 433s recommended (for 433s accuracy). In the 433s case of virtual 433s resampling, a 433s precise 433s determination of 433s the order 433s positions is 433s required; 433s therefore the 433s order-definition 433s is repeated using 433s the (assumed non- 433s low S/N) science 433s frame (str; 433s default: 'auto') 433s uves_cal_wavecal.extract.skymethod: In optimal 433s extraction mode, 433s the sky 433s subtraction 433s method to use. 433s 'median' 433s estimates the sky 433s as the median of 433s pixels along the 433s slit (ignoring 433s pixels close to 433s the object), 433s whereas 'optimal' 433s does a chi square 433s minimization 433s along the slit to 433s obtain the best 433s combined object 433s and sky levels. 433s The optimal 433s method gives the 433s most accurate sky 433s determination but 433s is also a bit 433s slower than the 433s median method 433s (str; default: 433s 'optimal') 433s uves_cal_wavecal.extract.oversample: The oversampling 433s factor used for 433s the virtual 433s resampling 433s algorithm. If 433s negative, the 433s value 5 is used 433s for S/N <=200, 433s and the value 10 433s is used if the 433s estimated S/N is 433s > 200 (int; 433s default: -1) 433s uves_cal_wavecal.extract.best: (optimal 433s extraction only) 433s If false 433s (fastest), the 433s spectrum is 433s extracted only 433s once. If true 433s (best), the 433s spectrum is 433s extracted twice, 433s the second time 433s using improved 433s variance 433s estimates based 433s on the first 433s iteration. Better 433s variance 433s estimates 433s slightly improve 433s the obtained 433s signal to noise 433s but at the cost 433s of increased 433s execution time 433s (bool; default: 433s True) 433s uves_cal_wavecal.rebin.wavestep: The bin size used 433s for BLUE/REDL 433s data (in w.l.u.) 433s in wavelength 433s space. If 433s negative, a step 433s size of 2/3 * ( 433s average pixel 433s size ) is used. 433s (float; default: 433s -1.0) 433s uves_cal_wavecal.rebin.wavestep_redu: The bin size used 433s for REDU data (in 433s w.l.u.) in 433s wavelength space. 433s If negative, a 433s step size of 2/3 433s * ( average pixel 433s size ) is used. 433s (float; default: 433s -1.0) 433s uves_cal_wavecal.rebin.scale: Whether or not to 433s multiply by the 433s factor dx/dlambda 433s (pixels per 433s wavelength) 433s during the 433s rebinning to 433s conserve the 433s flux. This option 433s is disabled as 433s default because 433s applying the flat 433s field correction 433s already ensures 433s flux 433s conservation. 433s Therefore this 433s parameter should 433s be TRUE (for 433s response and 433s science data) 433s only if 433s reduce.ffmethd = 433s no. (bool; 433s default: False) 433s uves_cal_mflat.norm_method: Method used to 433s build master 433s frame (str; 433s default: 433s 'explevel') 433s uves_cal_mflat.backsub.mmethod: Background 433s measuring method. 433s If equal to 433s 'median' the 433s background is 433s sampled using the 433s median of a 433s subwindow. If 433s 'minimum', the 433s subwindow minimum 433s value is used. If 433s 'no', no 433s background 433s subtraction is 433s done. (str; 433s default: 433s 'median') 433s uves_cal_mflat.backsub.npoints: This is the 433s number of columns 433s in interorder 433s space used to 433s sample the 433s background. (int; 433s default: 82) 433s uves_cal_mflat.backsub.radiusy: The height (in 433s pixels) of the 433s background 433s sampling window 433s is (2*radiusy + 433s 1). This 433s parameter is not 433s corrected for 433s binning. (int; 433s default: 2) 433s uves_cal_mflat.backsub.sdegree: Degree of 433s interpolating 433s splines. 433s Currently only 433s degree = 1 is 433s supported (int; 433s default: 1) 433s uves_cal_mflat.backsub.smoothx: If spline 433s interpolation is 433s used to measure 433s the background, 433s the x-radius of 433s the post- 433s smoothing window 433s is (smoothx * 433s image_width). 433s Here, 433s 'image_width' is 433s the image width 433s after binning. If 433s negative, the 433s default values 433s are used: 433s (25.0/4096) for 433s blue flat-field 433s frames, 433s (50.0/4096) for 433s red flat-field 433s frames, 433s (300.0/4096) for 433s blue science 433s frames and 433s (300.0/4096) for 433s red science 433s frames. (float; 433s default: -1.0) 433s uves_cal_mflat.backsub.smoothy: If spline 433s interpolation is 433s used to measure 433s the background, 433s the y-radius of 433s the post- 433s smoothing window 433s is (smoothy * 433s image_height). 433s Here, 433s 'image_height' is 433s the image height 433s after binning. If 433s negative, the 433s default values 433s are used: 433s (100.0/2048) for 433s blue flat-field 433s frames, 433s (300.0/2048) for 433s red flat-field 433s frames, 433s (200.0/2048) for 433s blue science 433s frames and 433s (500.0/2048) for 433s red science 433s frames. (float; 433s default: -1.0) 433s uves_obs_scired.clean_traps: Clean detector 433s traps. If TRUE 433s detector traps 433s are 433s interpolated.The 433s bad pixels are 433s replaced by the 433s average of 433s thenearest good 433s pixels in the 433s same column, or 433s simply marked as 433s bad. The 433s positions of bad 433s pixels are hard- 433s coded (as 433s function of UVES 433s chip). (bool; 433s default: False) 433s uves_obs_scired.reduce.slitlength: Extraction slit 433s length (in 433s pixels). If 433s negative, the 433s value inferred 433s from the raw 433s frame header is 433s used (float; 433s default: -1.0) 433s uves_obs_scired.reduce.skysub: Do sky- 433s subtraction (only 433s applicable to 433s linear and 433s average 433s extractions)? 433s (bool; default: 433s True) 433s uves_obs_scired.reduce.objoffset: Offset (in 433s pixels) of 433s extraction slit 433s with respect to 433s center of order. 433s For optimal 433s extraction the 433s full slit is 433s offset. For 433s linear/average 433s extraction, 433s reduce.objoffset 433s is ignored if 433s reduce.objslit 433s [default -1.0] is 433s negative. In this 433s case the offset 433s is automatically 433s determined by 433s measuring the 433s actual object 433s position. (float; 433s default: 0.0) 433s uves_obs_scired.reduce.objslit: Object window 433s size (in pixels), 433s ignored for 433s optimal 433s extraction. The 433s value must be 433s smaller than the 433s total slit 433s length. If 433s negative, the 433s default value 433s (half of full 433s slit length) is 433s used. The upper 433s and lower sky 433s windows are 433s defined as the 433s part of the full 433s slit (if any) 433s outside the 433s object window. 433s The center of the 433s object window is 433s determined by the 433s offset parameter. 433s (float; default: 433s -1.0) 433s uves_obs_scired.reduce.tiltcorr: If enabled 433s (recommended), 433s the provided 433s dispersion 433s solutions 433s obtained at 433s different slit 433s positions are 433s interpolated 433s linearly at the 433s actually measured 433s position of the 433s object/sky. Line 433s tilt correction 433s is currently not 433s supported for 2d 433s extraction, in 433s which case the 433s dispersion 433s solution obtained 433s at the middle of 433s the slit is 433s always used. 433s (bool; default: 433s True) 433s uves_obs_scired.reduce.ffmethod: Flat-fielding 433s method. If set to 433s 'pixel', flat- 433s fielding is done 433s in pixel-pixel 433s space (before 433s extraction); if 433s set to 'extract', 433s flat- fielding is 433s performed in 433s pixel-order space 433s (i.e. after 433s extraction). If 433s set to 'no', no 433s flat-field 433s correction is 433s done, in which 433s case reduce.rebin 433s .scale should be 433s set to true to 433s ensure flux 433s conservation 433s (both for 433s response and 433s science data) 433s (str; default: 433s 'extract') 433s uves_obs_scired.reduce.merge: Order merging 433s method. If 433s 'optimal', the 433s flux in the 433s overlapping 433s region is set to 433s the (optimally 433s computed, using 433s the 433s uncertainties) 433s average of single 433s order spectra. If 433s 'sum', the flux 433s in the 433s overlapping 433s region is 433s computed as the 433s sum of the single 433s order spectra. If 433s 'noappend' the 433s spectrum is 433s simply rebinned 433s but not merged.If 433s flat-fielding is 433s done, method 433s 'optimal' is 433s recommended, 433s otherwise 'sum'. 433s (str; default: 433s 'optimal') 433s uves_obs_scired.reduce.merge_delt1: Order merging 433s left hand (short 433s wavelength) cut. 433s To reduce the 433s amount of order 433s overlapping 433s regions we allow 433s to cut short and 433s long wavelength 433s ranges. This may 433s reduce the ripple 433s possibly 433s introduced by the 433s order merging. 433s Suggested values 433s are: 10 (W<=390), 433s 12 (390 200 (int; 433s default: -1) 433s uves_obs_scired.reduce.extract.best: (optimal 433s extraction only) 433s If false 433s (fastest), the 433s spectrum is 433s extracted only 433s once. If true 433s (best), the 433s spectrum is 433s extracted twice, 433s the second time 433s using improved 433s variance 433s estimates based 433s on the first 433s iteration. Better 433s variance 433s estimates 433s slightly improve 433s the obtained 433s signal to noise 433s but at the cost 433s of increased 433s execution time 433s (bool; default: 433s True) 433s uves_obs_scired.reduce.rebin.wavestep: The bin size used 433s for BLUE/REDL 433s data (in w.l.u.) 433s in wavelength 433s space. If 433s negative, a step 433s size of 2/3 * ( 433s average pixel 433s size ) is used. 433s (float; default: 433s -1.0) 433s uves_obs_scired.reduce.rebin.wavestep_redu: The bin size used 433s for REDU data (in 433s w.l.u.) in 433s wavelength space. 433s If negative, a 433s step size of 2/3 433s * ( average pixel 433s size ) is used. 433s (float; default: 433s -1.0) 433s uves_obs_scired.reduce.rebin.scale: Whether or not to 433s multiply by the 433s factor dx/dlambda 433s (pixels per 433s wavelength) 433s during the 433s rebinning to 433s conserve the 433s flux. This option 433s is disabled as 433s default because 433s applying the flat 433s field correction 433s already ensures 433s flux 433s conservation. 433s Therefore this 433s parameter should 433s be TRUE (for 433s response and 433s science data) 433s only if 433s reduce.ffmethd = 433s no. (bool; 433s default: False) 433s uves_cal_mbias.clean_traps: Clean detector 433s traps. If TRUE 433s detector traps 433s are 433s interpolated.The 433s bad pixels are 433s replaced by the 433s average of 433s thenearest good 433s pixels in the 433s same column, or 433s simply marked as 433s bad. The 433s positions of bad 433s pixels are hard- 433s coded (as 433s function of UVES 433s chip). (bool; 433s default: False) 433s uves_cal_mbias.stack_method: Method used to 433s build master 433s frame (str; 433s default: 433s 'median') 433s uves_cal_mbias.klow: Kappa used to 433s clip low level 433s values, when 433s method is set to 433s 'mean' (float; 433s default: 5.0) 433s uves_cal_mbias.khigh: Kappa used to 433s clip high level 433s values, when 433s method is set to 433s 'mean' (float; 433s default: 5.0) 433s uves_cal_mbias.niter: Number of kappa 433s sigma iterations, 433s when method is 433s set to 'mean' 433s (int; default: 5) 433s uves_cal_mbias.pd_compute: Determine Fixed 433s Pattern Noise. If 433s TRUE the Fixed 433s Patter Noise 433s power spectrum is 433s determined.(as 433s function of UVES 433s chip). (bool; 433s default: False) 433s uves_cal_mbias.dc_mask_x: x-size (pixel) of 433s the mask starting 433s at (x,y) = (1,1) 433s (int; default: 1) 433s uves_cal_mbias.dc_mask_y: y-size (pixel) of 433s the mask starting 433s at (x,y) = (1,1) 433s (int; default: 1) 433s uves_cal_orderpos.use_guess_tab: If a Guess order 433s table is provided 433s this parameter 433s set how it is 433s used:0: No usage, 433s 1: use it to set 433s lower/upper Y 433s raws where order 433s are searched 2: 433s the order table 433s try to fully 433s match the guess 433s (int; default: 1) 433s uves_cal_orderpos.radx: Half X size of 433s median filtering 433s window (int; 433s default: 2) 433s uves_cal_orderpos.rady: Half Y size of 433s median filtering 433s window (int; 433s default: 1) 433s uves_cal_orderpos.mmethod: Background 433s subtraction 433s method. If equal 433s to 'median' the 433s background is 433s sampled using the 433s median of a sub- 433s window. If 433s 'minimum', the 433s minimum sub- 433s window value is 433s used. If 'no', no 433s background 433s subtraction is 433s done. (str; 433s default: 433s 'median') 433s uves_cal_orderpos.backsubgrid: Number of grid 433s points (in x- and 433s y-direction) used 433s to estimate the 433s background 433s (mode=poly). 433s (int; default: 433s 50) 433s uves_cal_orderpos.backsubradiusy: The height (in 433s pixels) of the 433s background 433s sampling window 433s is (2*radiusy + 433s 1). This 433s parameter is not 433s corrected for 433s binning. (int; 433s default: 2) 433s uves_cal_orderpos.backsubkappa: The value of 433s kappa in the one- 433s sided kappa-sigma 433s clipping used to 433s estimate the 433s background 433s (mode=poly). 433s (float; default: 433s 4.0) 433s uves_cal_orderpos.backsubdegx: Degree (in x) of 433s polynomial used 433s to estimate the 433s background 433s (mode=poly). 433s (int; default: 2) 433s uves_cal_orderpos.backsubdegy: Degree (in y) of 433s polynomial used 433s to estimate the 433s background 433s (mode=poly). 433s (int; default: 2) 433s uves_cal_orderpos.samplewidth: Separation of 433s sample traces 433s (used by Hough 433s transform) in 433s input image (int; 433s default: 50) 433s uves_cal_orderpos.minslope: Minimum possible 433s line slope. This 433s should be the 433s 'physical' slope 433s on the chip, i.e. 433s not taking 433s binning factors 433s into account, 433s which is handled 433s by the recipe 433s (float; default: 433s 0.0) 433s uves_cal_orderpos.maxslope: Maximum possible 433s line slope 433s (float; default: 433s 0.2) 433s uves_cal_orderpos.sloperes: Resolution (width 433s in pixels) of 433s Hough space (int; 433s default: 120) 433s uves_cal_orderpos.pthres: In automatic 433s mode, or if the 433s number of orders 433s to detect is read 433s from a guess 433s table, the 433s detection of new 433s lines stops when 433s the intensity of 433s a candidate line 433s drops to less 433s than 'pthres' 433s times the 433s intensity of the 433s previous 433s detection. 433s (float; default: 433s 0.2) 433s uves_cal_orderpos.tracestep: The step size 433s used when tracing 433s the orders (int; 433s default: 10) 433s uves_cal_orderpos.minthresh: The minimum 433s threshold value 433s is (min + 433s minthres*(max - 433s min)). Here 'min' 433s and 'max' are the 433s lowest and 433s highest pixel 433s values in the 433s central bin of 433s the order (float; 433s default: 0.2) 433s uves_cal_orderpos.maxgap: If the order line 433s drops below 433s detection 433s threshold, the 433s order tracing 433s algorithm will 433s try to jump a gap 433s of maximum size 433s 'maxgap' 433s multiplied by the 433s image width 433s (float; default: 433s 0.2) 433s uves_cal_orderpos.maxrms: When fitting the 433s orders with 433s straight lines, 433s this is the 433s maximum allowed 433s RMS relative to 433s the median RMS of 433s all orders 433s (float; default: 433s 100.0) 433s uves_cal_orderpos.defpol1: The degree of the 433s bivarite fit 433s (cross dispersion 433s direction). If 433s negative, the 433s degree is 433s optimized to give 433s the best fit 433s (int; default: 433s -1) 433s uves_cal_orderpos.defpol2: The degree of the 433s bivarite fit 433s (order number). 433s If negative, the 433s degree is 433s optimized to give 433s the best fit 433s (int; default: 433s -1) 433s uves_cal_orderpos.kappa: Used for kappa- 433s sigma clipping of 433s the final 433s polynomial fit. 433s If negative, no 433s clipping is done 433s (float; default: 433s 4.0)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 433s [ INFO ] recipe id flames_cal_mkmaster 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] recipe id uves_cal_mkmaster 433s [ INFO ] recipe id uves_cal_tflat 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s 433s Author: Jonas M. Larsen 433s 433s 433s Recipe uves_obs_scired: 433s version 6.1.8 433s Parameters: {'debug': False, 'plotter': 'no', 'process_chip': 'both', 'clean_traps': False, 'reduce.slitlength': -1.0, 'reduce.skysub': True, 'reduce.objoffset': 0.0, 'reduce.objslit': -1.0, 'reduce.tiltcorr': True, 'reduce.ffmethod': 'extract', 'reduce.merge': 'optimal', 'reduce.merge_delt1': 0.0, 'reduce.merge_delt2': 0.0, 'reduce.extract.method': 'optimal', 'reduce.extract.kappa': 10.0, 'reduce.extract.chunk': 32, 'reduce.extract.profile': 'auto', 'reduce.extract.skymethod': 'optimal', 'reduce.extract.oversample': -1, 'reduce.extract.best': True, 'reduce.backsub.mmethod': 'median', 'reduce.backsub.npoints': 82, 'reduce.backsub.radiusy': 2, 'reduce.backsub.sdegree': 1, 'reduce.backsub.smoothx': -1.0, 'reduce.backsub.smoothy': -1.0, 'reduce.rebin.wavestep': -1.0, 'reduce.rebin.wavestep_redu': -1.0, 'reduce.rebin.scale': False} 433s Docstring: Reduces a science frame 433s 433s This recipe reduces a science frame (SCIENCE_BLUE or SCIENCE_RED, or 433s SCI_POINT_BLUE or SCI_POINT_RED, or SCI_EXTND_BLUE or SCI_EXTND_RED 433s or SCI_SLICER_BLUE or SCI_SLICER_RED) using a combination (depending 433s on recipe parameters and provided input frames) of the steps: - bias 433s subtraction, - dark subtraction, - background subtraction, - 433s extraction/cosmic ray removal, - flat field correction, - wavelength 433s rebinning, - sky subtraction, - order merging, - response 433s correction (if response curve is provided). Additional input for this 433s recipe are: order table(s) for each chip, ORDER_TABLE_xxxx (where 433s xxxx=BLUE, REDL, REDU), line table(s) for each chip, LINE_TABLE_xxxx, 433s a master bias frame, MASTER_BIAS_xxxx, a master flat, 433s MASTER_FLAT_xxxx, optionally an instrument response table, 433s INSTR_RESPONSE_FINE_xxx, optionally an master response table, 433s MASTER_RESPONSE_xxx, and optionally a table describing the atmospheric 433s extinction, EXTCOEFF_TABLE. For each chip (xxxx = BLUE, REDL, REDU) 433s the recipe produces a combination of the products: 'RED_SCIENCE_xxxx' 433s Reduced science spectrum 'MERGED_SCIENCE_xxxx' Merged spectrum, 433s no sky subtraction 'WCALIB_SCIENCE_xxxx' Extracted, wavelength 433s calibrated frame in (wavelength, order) 433s space 'WCALIB_FF_SCIENCE_xxxx' Extracted, flat-fielded, wave.cal. 433s frame in (wavelength, order) space 433s (Only if flatfielding done) 'WCALIB_FLAT_OBJ_xxxx' Extracted, 433s wavelength calibrated flat field in 433s (wavelength, order) space (Only if 433s flatfielding done) 'ERRORBAR_SCIENCE_xxxx' Error bars of 433s 'RED_SCIENCE_xxxx' 'VARIANCE_SCIENCE_xxxx' Variance of extracted, 433s flatfielded object in (pixel, order) space 433s 'ORDER_TRACE_xxxx' Table describing the spatial profile 433s 'FLUXCAL_SCIENCE_xxxx' Flux-calibrated science spectrum 433s 'FLUXCAL_ERROR_xxxx' Error bars of 'FLUXCAL_SCIENCE_xxxx' 433s 'BKG_SCI_xxxx' The subtracted background image 433s 'CRMASK_xxxx' List of cosmic ray hits 'MERGED_SKY_xxxx' 433s The merged sky spectrum 'EXT_2D_SCIENCE_xxxx' The 2d extracted 433s spectrum 'FF2D_SCIENCE_xxxx' The 2d extracted, flat-fielded 433s spectrum 'WCAL2D_SCIENCE_xxxx' The 2d extracted, flat-fielded, 433s wave.cal. spectrum 'MER2D_SCIENCE_xxxx' The 2d reduced, flux- 433s calibrated (if possible) science spectrum 433s 433s Parameters: 433s debug: Whether or not to save intermediate 433s results to local directory (bool; 433s default: False) 433s plotter: Any plots produced by the recipe are 433s redirected to the command specified by 433s this parameter. The plotting command must 433s contain the substring 'gnuplot' and must 433s be able to parse gnuplot syntax on its 433s standard input. Valid examples of such a 433s command may include 'gnuplot -persist' 433s and 'cat > mygnuplot$$.gp'. A finer 433s control of the plotting options can be 433s obtained by writing an executable script, 433s e.g. my_gnuplot.pl, that executes gnuplot 433s after setting the desired gnuplot options 433s (e.g. set terminal pslatex color). To 433s turn off plotting, set this parameter to 433s 'no' (str; default: 'no') 433s process_chip: For RED arm data process the redl, redu, 433s or both chip(s) (str; default: 'both') 433s clean_traps: Clean detector traps. If TRUE detector 433s traps are interpolated.The bad pixels are 433s replaced by the average of thenearest 433s good pixels in the same column, or simply 433s marked as bad. The positions of bad 433s pixels are hard-coded (as function of 433s UVES chip). (bool; default: False) 433s reduce.slitlength: Extraction slit length (in pixels). If 433s negative, the value inferred from the raw 433s frame header is used (float; default: 433s -1.0) 433s reduce.skysub: Do sky-subtraction (only applicable to 433s linear and average extractions)? (bool; 433s default: True) 433s reduce.objoffset: Offset (in pixels) of extraction slit 433s with respect to center of order. For 433s optimal extraction the full slit is 433s offset. For linear/average extraction, 433s reduce.objoffset is ignored if 433s reduce.objslit [default -1.0] is 433s negative. In this case the offset is 433s automatically determined by measuring the 433s actual object position. (float; default: 433s 0.0) 433s reduce.objslit: Object window size (in pixels), ignored 433s for optimal extraction. The value must be 433s smaller than the total slit length. If 433s negative, the default value (half of full 433s slit length) is used. The upper and lower 433s sky windows are defined as the part of 433s the full slit (if any) outside the object 433s window. The center of the object window 433s is determined by the offset parameter. 433s (float; default: -1.0) 433s reduce.tiltcorr: If enabled (recommended), the provided 433s dispersion solutions obtained at 433s different slit positions are interpolated 433s linearly at the actually measured 433s position of the object/sky. Line tilt 433s correction is currently not supported for 433s 2d extraction, in which case the 433s dispersion solution obtained at the 433s middle of the slit is always used. (bool; 433s default: True) 433s reduce.ffmethod: Flat-fielding method. If set to 'pixel', 433s flat-fielding is done in pixel-pixel 433s space (before extraction); if set to 433s 'extract', flat- fielding is performed in 433s pixel-order space (i.e. after 433s extraction). If set to 'no', no flat- 433s field correction is done, in which case 433s reduce.rebin.scale should be set to true 433s to ensure flux conservation (both for 433s response and science data) (str; default: 433s 'extract') 433s reduce.merge: Order merging method. If 'optimal', the 433s flux in the overlapping region is set to 433s the (optimally computed, using the 433s uncertainties) average of single order 433s spectra. If 'sum', the flux in the 433s overlapping region is computed as the sum 433s of the single order spectra. If 433s 'noappend' the spectrum is simply 433s rebinned but not merged.If flat-fielding 433s is done, method 'optimal' is recommended, 433s otherwise 'sum'. (str; default: 433s 'optimal') 433s reduce.merge_delt1: Order merging left hand (short 433s wavelength) cut. To reduce the amount of 433s order overlapping regions we allow to cut 433s short and long wavelength ranges. This 433s may reduce the ripple possibly introduced 433s by the order merging. Suggested values 433s are: 10 (W<=390), 12 (390 200 (int; default: -1) 433s reduce.extract.best: (optimal extraction only) If false 433s (fastest), the spectrum is extracted only 433s once. If true (best), the spectrum is 433s extracted twice, the second time using 433s improved variance estimates based on the 433s first iteration. Better variance 433s estimates slightly improve the obtained 433s signal to noise but at the cost of 433s increased execution time (bool; default: 433s True) 433s reduce.backsub.mmethod: Background measuring method. If equal to 433s 'median' the background is sampled using 433s the median of a subwindow. If 'minimum', 433s the subwindow minimum value is used. If 433s 'no', no background subtraction is done. 433s (str; default: 'median') 433s reduce.backsub.npoints: This is the number of columns in 433s interorder space used to sample the 433s background. (int; default: 82) 433s reduce.backsub.radiusy: The height (in pixels) of the background 433s sampling window is (2*radiusy + 1). This 433s parameter is not corrected for binning. 433s (int; default: 2) 433s reduce.backsub.sdegree: Degree of interpolating splines. 433s Currently only degree = 1 is supported 433s (int; default: 1) 433s reduce.backsub.smoothx: If spline interpolation is used to 433s measure the background, the x-radius of 433s the post-smoothing window is (smoothx * 433s image_width). Here, 'image_width' is the 433s image width after binning. If negative, 433s the default values are used: (25.0/4096) 433s for blue flat-field frames, (50.0/4096) 433s for red flat-field frames, (300.0/4096) 433s for blue science frames and (300.0/4096) 433s for red science frames. (float; default: 433s -1.0) 433s reduce.backsub.smoothy: If spline interpolation is used to 433s measure the background, the y-radius of 433s the post-smoothing window is (smoothy * 433s image_height). Here, 'image_height' is 433s the image height after binning. If 433s negative, the default values are used: 433s (100.0/2048) for blue flat-field frames, 433s (300.0/2048) for red flat-field frames, 433s (200.0/2048) for blue science frames and 433s (500.0/2048) for red science frames. 433s (float; default: -1.0) 433s reduce.rebin.wavestep: The bin size used for BLUE/REDL data (in 433s w.l.u.) in wavelength space. If negative, 433s a step size of 2/3 * ( average pixel size 433s ) is used. (float; default: -1.0) 433s reduce.rebin.wavestep_redu: The bin size used for REDU data (in 433s w.l.u.) in wavelength space. If negative, 433s a step size of 2/3 * ( average pixel size 433s ) is used. (float; default: -1.0) 433s reduce.rebin.scale: Whether or not to multiply by the factor 433s dx/dlambda (pixels per wavelength) during 433s the rebinning to conserve the flux. This 433s option is disabled as default because 433s applying the flat field correction 433s already ensures flux conservation. 433s Therefore this parameter should be TRUE 433s (for response and science data) only if 433s reduce.ffmethd = no. (bool; default: 433s False)[ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 433s [ INFO ] recipe id flames_cal_mkmaster 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] recipe id uves_cal_mkmaster 433s [ INFO ] recipe id uves_cal_tflat 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] Creation of trap not supported for recipe: 'flames_cal_mkmaster' 433s [ INFO ] recipe id flames_cal_mkmaster 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s [ INFO ] recipe id uves_cal_mkmaster 433s [ INFO ] recipe id uves_cal_tflat 433s [ INFO ] Creation of trap not supported for recipe: 'uves_cal_mflat' 433s [ INFO ] recipe id uves_cal_mflat 433s 433s Author: Jonas M. Larsen 433s 433s 433s Recipe uves_utl_ima_arith: 433s version 6.1.8 433s Parameters: {'op': '+', 'value': 9999.0} 433s Docstring: Computes result of ima1 op ima2 433s 433s This recipe performs image computation. The input files are 2 images 433s their associated tags should be RAW_IMA. The output is an image 433s resulting from the RAW_IMA op RAW_IMA where op indicates the operation 433s to be performed specified by the parameter uves.uves_utl_ima_arith.op 433s having alias 'op' Information on relevant parameters can be found with 433s esorex --params uves_utl_ima_arith esorex --help uves_utl_ima_arith 433s 433s Parameters: 433s op: A possible operation (str; default: '+') 433s value: a value (float; default: 9999.0) 433s Author: Andrea Modigliani 433s 433s 433s Recipe uves_utl_remove_crh_single: 433s version 6.1.8 433s Parameters: {'crh_frac_max': 0.7, 'sigma_lim': 25.0, 'f_lim': 0.7, 'max_iter': 5, 'gain': 2.42, 'ron': 1.0} 433s Docstring: Remove CRHs from an image 433s 433s This recipe performs image computation. The input files is one image 433s their associated tags should be IMA. The output is the image cleaned 433s from CRHs Information on relevant parameters can be found with esorex 433s --params uves_utl_remove_crh_single esorex --help 433s uves_utl_remove_crh_single 433s 433s Parameters: 433s crh_frac_max: Maximum fraction of allowed CRHs (float; default: 0.7) 433s sigma_lim: Maximum sigma in kappa-sigma clip (float; default: 433s 25.0) 433s f_lim: Max fraction of bad pixels allowed (float; default: 433s 0.7) 433s max_iter: Max fraction of bad pixels allowed (int; default: 5) 433s gain: Detector's gain (float; default: 2.42) 433s ron: Detector's ron (float; default: 1.0) 433s Author: Andrea Modigliani 433s 433s 433s autopkgtest [01:12:00]: test test-recipe.py: -----------------------] 438s autopkgtest [01:12:05]: test test-recipe.py: - - - - - - - - - - results - - - - - - - - - - 438s test-recipe.py PASS (superficial) 442s autopkgtest [01:12:09]: @@@@@@@@@@@@@@@@@@@@ summary 442s test-recipe.py PASS (superficial)