0s autopkgtest [15:39:32]: starting date and time: 2024-03-19 15:39:32+0000 0s autopkgtest [15:39:32]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [15:39:32]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6jv_ity4/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:freetype,src:libpng1.6,src:wp2latex --apt-upgrade rdkit --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=freetype/2.13.2+dfsg-1build2 libpng1.6/1.6.43-3 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-4.secgroup --name adt-noble-arm64-rdkit-20240319-153932-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 149s autopkgtest [15:42:00]: testbed dpkg architecture: arm64 149s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 149s autopkgtest [15:42:00]: testbed apt version: 2.7.12 149s autopkgtest [15:42:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 149s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [52.7 kB] 149s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3777 kB] 150s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 150s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [486 kB] 150s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [656 kB] 150s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 150s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 150s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 150s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4144 kB] 150s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 150s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [56.7 kB] 150s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 152s Fetched 9340 kB in 2s (5035 kB/s) 152s Reading package lists... 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 157s Calculating upgrade... 157s The following packages have been kept back: 157s libfreetype6 157s The following packages will be upgraded: 157s ubuntu-minimal ubuntu-standard 157s 2 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 157s Need to get 21.5 kB of archives. 157s After this operation, 0 B of additional disk space will be used. 157s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536build1 [10.7 kB] 157s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536build1 [10.7 kB] 159s Fetched 21.5 kB in 0s (94.3 kB/s) 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 160s Preparing to unpack .../ubuntu-minimal_1.536build1_arm64.deb ... 160s Unpacking ubuntu-minimal (1.536build1) over (1.536) ... 160s Preparing to unpack .../ubuntu-standard_1.536build1_arm64.deb ... 160s Unpacking ubuntu-standard (1.536build1) over (1.536) ... 160s Setting up ubuntu-minimal (1.536build1) ... 160s Setting up ubuntu-standard (1.536build1) ... 160s Reading package lists... 160s Building dependency tree... 160s Reading state information... 161s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 161s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 161s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 161s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 162s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 163s Reading package lists... 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 165s Calculating upgrade... 165s The following packages have been kept back: 165s libfreetype6 165s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 165s Reading package lists... 165s Building dependency tree... 165s Reading state information... 166s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 169s autopkgtest [15:42:21]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 169s autopkgtest [15:42:21]: @@@@@@@@@@@@@@@@@@@@ apt-source rdkit 177s Get:1 http://ftpmaster.internal/ubuntu noble/universe rdkit 202309.3-3 (dsc) [2884 B] 177s Get:2 http://ftpmaster.internal/ubuntu noble/universe rdkit 202309.3-3 (tar) [61.9 MB] 177s Get:3 http://ftpmaster.internal/ubuntu noble/universe rdkit 202309.3-3 (diff) [24.9 kB] 177s gpgv: Signature made Wed Feb 28 09:56:29 2024 UTC 177s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 177s gpgv: issuer "merkys@debian.org" 177s gpgv: Can't check signature: No public key 177s dpkg-source: warning: cannot verify inline signature for ./rdkit_202309.3-3.dsc: no acceptable signature found 180s autopkgtest [15:42:32]: testing package rdkit version 202309.3-3 181s autopkgtest [15:42:33]: build not needed 505s autopkgtest [15:47:57]: test installcheck: preparing testbed 516s Reading package lists... 517s Building dependency tree... 517s Reading state information... 517s Starting pkgProblemResolver with broken count: 0 518s Starting 2 pkgProblemResolver with broken count: 0 518s Done 518s The following additional packages will be installed: 518s fontconfig-config fonts-freefont-ttf libblas3 libboost-iostreams1.83.0 518s libboost-python1.83.0 libboost-serialization1.83.0 libcairo2 libcoordgen3 518s libfontconfig1 libgfortran5 libjs-jquery libjs-underscore libjson-perl 518s liblapack3 libllvm17 libmaeparser1 libpixman-1-0 libpq5 518s libpython3.11-minimal libpython3.11-stdlib libpython3.12 librdkit-dev 518s librdkit1 libxcb-render0 libxcb-shm0 libxrender1 libxslt1.1 postgresql-16 518s postgresql-16-rdkit postgresql-client-16 postgresql-client-common 518s postgresql-common python3-numpy python3-rdkit python3.11 python3.11-minimal 518s rdkit-data rdkit-doc ssl-cert 518s Suggested packages: 518s postgresql-doc-16 gcc gfortran python3-dev python3-pytest python3.11-venv 518s python3.11-doc binfmt-support 518s Recommended packages: 518s javascript-common libjson-xs-perl 518s The following NEW packages will be installed: 518s autopkgtest-satdep fontconfig-config fonts-freefont-ttf libblas3 518s libboost-iostreams1.83.0 libboost-python1.83.0 libboost-serialization1.83.0 518s libcairo2 libcoordgen3 libfontconfig1 libgfortran5 libjs-jquery 518s libjs-underscore libjson-perl liblapack3 libllvm17 libmaeparser1 518s libpixman-1-0 libpq5 libpython3.11-minimal libpython3.11-stdlib 518s libpython3.12 librdkit-dev librdkit1 libxcb-render0 libxcb-shm0 libxrender1 518s libxslt1.1 postgresql-16 postgresql-16-rdkit postgresql-client-16 518s postgresql-client-common postgresql-common python3-numpy python3-rdkit 518s python3.11 python3.11-minimal rdkit-data rdkit-doc ssl-cert 519s 0 upgraded, 40 newly installed, 0 to remove and 1 not upgraded. 519s Need to get 97.0 MB/97.0 MB of archives. 519s After this operation, 469 MB of additional disk space will be used. 519s Get:1 /tmp/autopkgtest.faEgtM/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [756 B] 519s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.11-minimal arm64 3.11.8-1 [837 kB] 519s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 python3.11-minimal arm64 3.11.8-1 [2150 kB] 519s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libjson-perl all 4.10000-1 [81.9 kB] 519s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 postgresql-client-common all 257 [36.2 kB] 519s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 ssl-cert all 1.1.2ubuntu1 [17.8 kB] 519s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 postgresql-common all 257 [162 kB] 519s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.11-stdlib arm64 3.11.8-1 [1913 kB] 519s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 python3.11 arm64 3.11.8-1 [589 kB] 519s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-freefont-ttf all 20211204+svn4273-2 [5641 kB] 520s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 520s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 520s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-iostreams1.83.0 arm64 1.83.0-2ubuntu1 [339 kB] 520s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-python1.83.0 arm64 1.83.0-2ubuntu1 [457 kB] 520s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-serialization1.83.0 arm64 1.83.0-2ubuntu1 [434 kB] 520s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 520s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 520s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 520s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 520s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 520s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 520s Get:22 http://ftpmaster.internal/ubuntu noble/universe arm64 libcoordgen3 arm64 3.0.2-1 [207 kB] 520s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 520s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 520s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 520s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 520s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libllvm17 arm64 1:17.0.6-5build1 [25.0 MB] 520s Get:28 http://ftpmaster.internal/ubuntu noble/universe arm64 libmaeparser1 arm64 1.3.1-1build1 [84.5 kB] 520s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libpq5 arm64 16.2-1 [136 kB] 520s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.2-1 [2291 kB] 520s Get:31 http://ftpmaster.internal/ubuntu noble/universe arm64 librdkit1 arm64 202309.3-3 [4841 kB] 521s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 librdkit-dev arm64 202309.3-3 [305 kB] 521s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.35-1 [161 kB] 521s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 postgresql-client-16 arm64 16.2-1 [1260 kB] 521s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 postgresql-16 arm64 16.2-1 [15.2 MB] 521s Get:36 http://ftpmaster.internal/ubuntu noble/universe arm64 postgresql-16-rdkit arm64 202309.3-3 [380 kB] 521s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 python3-numpy arm64 1:1.24.2-2 [4525 kB] 521s Get:38 http://ftpmaster.internal/ubuntu noble/universe arm64 rdkit-data all 202309.3-3 [12.6 MB] 522s Get:39 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-rdkit arm64 202309.3-3 [4608 kB] 522s Get:40 http://ftpmaster.internal/ubuntu noble/universe arm64 rdkit-doc all 202309.3-3 [8435 kB] 523s Preconfiguring packages ... 523s Fetched 97.0 MB in 4s (27.4 MB/s) 523s Selecting previously unselected package libpython3.11-minimal:arm64. 523s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 523s Preparing to unpack .../00-libpython3.11-minimal_3.11.8-1_arm64.deb ... 523s Unpacking libpython3.11-minimal:arm64 (3.11.8-1) ... 523s Selecting previously unselected package python3.11-minimal. 523s Preparing to unpack .../01-python3.11-minimal_3.11.8-1_arm64.deb ... 523s Unpacking python3.11-minimal (3.11.8-1) ... 523s Selecting previously unselected package libjson-perl. 523s Preparing to unpack .../02-libjson-perl_4.10000-1_all.deb ... 523s Unpacking libjson-perl (4.10000-1) ... 523s Selecting previously unselected package postgresql-client-common. 523s Preparing to unpack .../03-postgresql-client-common_257_all.deb ... 523s Unpacking postgresql-client-common (257) ... 523s Selecting previously unselected package ssl-cert. 523s Preparing to unpack .../04-ssl-cert_1.1.2ubuntu1_all.deb ... 523s Unpacking ssl-cert (1.1.2ubuntu1) ... 523s Selecting previously unselected package postgresql-common. 523s Preparing to unpack .../05-postgresql-common_257_all.deb ... 523s Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common' 523s Unpacking postgresql-common (257) ... 523s Selecting previously unselected package libpython3.11-stdlib:arm64. 523s Preparing to unpack .../06-libpython3.11-stdlib_3.11.8-1_arm64.deb ... 523s Unpacking libpython3.11-stdlib:arm64 (3.11.8-1) ... 524s Selecting previously unselected package python3.11. 524s Preparing to unpack .../07-python3.11_3.11.8-1_arm64.deb ... 524s Unpacking python3.11 (3.11.8-1) ... 524s Selecting previously unselected package fonts-freefont-ttf. 524s Preparing to unpack .../08-fonts-freefont-ttf_20211204+svn4273-2_all.deb ... 524s Unpacking fonts-freefont-ttf (20211204+svn4273-2) ... 524s Selecting previously unselected package fontconfig-config. 524s Preparing to unpack .../09-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 525s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 525s Selecting previously unselected package libblas3:arm64. 525s Preparing to unpack .../10-libblas3_3.12.0-3_arm64.deb ... 525s Unpacking libblas3:arm64 (3.12.0-3) ... 525s Selecting previously unselected package libboost-iostreams1.83.0:arm64. 525s Preparing to unpack .../11-libboost-iostreams1.83.0_1.83.0-2ubuntu1_arm64.deb ... 525s Unpacking libboost-iostreams1.83.0:arm64 (1.83.0-2ubuntu1) ... 525s Selecting previously unselected package libboost-python1.83.0. 525s Preparing to unpack .../12-libboost-python1.83.0_1.83.0-2ubuntu1_arm64.deb ... 525s Unpacking libboost-python1.83.0 (1.83.0-2ubuntu1) ... 525s Selecting previously unselected package libboost-serialization1.83.0:arm64. 525s Preparing to unpack .../13-libboost-serialization1.83.0_1.83.0-2ubuntu1_arm64.deb ... 525s Unpacking libboost-serialization1.83.0:arm64 (1.83.0-2ubuntu1) ... 525s Selecting previously unselected package libfontconfig1:arm64. 525s Preparing to unpack .../14-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 525s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 525s Selecting previously unselected package libpixman-1-0:arm64. 525s Preparing to unpack .../15-libpixman-1-0_0.42.2-1_arm64.deb ... 525s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 525s Selecting previously unselected package libxcb-render0:arm64. 525s Preparing to unpack .../16-libxcb-render0_1.15-1_arm64.deb ... 525s Unpacking libxcb-render0:arm64 (1.15-1) ... 525s Selecting previously unselected package libxcb-shm0:arm64. 525s Preparing to unpack .../17-libxcb-shm0_1.15-1_arm64.deb ... 525s Unpacking libxcb-shm0:arm64 (1.15-1) ... 525s Selecting previously unselected package libxrender1:arm64. 525s Preparing to unpack .../18-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 525s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 525s Selecting previously unselected package libcairo2:arm64. 525s Preparing to unpack .../19-libcairo2_1.18.0-1_arm64.deb ... 525s Unpacking libcairo2:arm64 (1.18.0-1) ... 525s Selecting previously unselected package libcoordgen3:arm64. 525s Preparing to unpack .../20-libcoordgen3_3.0.2-1_arm64.deb ... 525s Unpacking libcoordgen3:arm64 (3.0.2-1) ... 525s Selecting previously unselected package libgfortran5:arm64. 525s Preparing to unpack .../21-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 525s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 525s Selecting previously unselected package libjs-jquery. 525s Preparing to unpack .../22-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 525s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 525s Selecting previously unselected package libjs-underscore. 525s Preparing to unpack .../23-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 525s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 525s Selecting previously unselected package liblapack3:arm64. 525s Preparing to unpack .../24-liblapack3_3.12.0-3_arm64.deb ... 525s Unpacking liblapack3:arm64 (3.12.0-3) ... 529s Selecting previously unselected package libllvm17:arm64. 529s Preparing to unpack .../25-libllvm17_1%3a17.0.6-5build1_arm64.deb ... 529s Unpacking libllvm17:arm64 (1:17.0.6-5build1) ... 529s Selecting previously unselected package libmaeparser1:arm64. 529s Preparing to unpack .../26-libmaeparser1_1.3.1-1build1_arm64.deb ... 529s Unpacking libmaeparser1:arm64 (1.3.1-1build1) ... 529s Selecting previously unselected package libpq5:arm64. 529s Preparing to unpack .../27-libpq5_16.2-1_arm64.deb ... 529s Unpacking libpq5:arm64 (16.2-1) ... 529s Selecting previously unselected package libpython3.12:arm64. 529s Preparing to unpack .../28-libpython3.12_3.12.2-1_arm64.deb ... 529s Unpacking libpython3.12:arm64 (3.12.2-1) ... 529s Selecting previously unselected package librdkit1. 529s Preparing to unpack .../29-librdkit1_202309.3-3_arm64.deb ... 529s Unpacking librdkit1 (202309.3-3) ... 529s Selecting previously unselected package librdkit-dev. 529s Preparing to unpack .../30-librdkit-dev_202309.3-3_arm64.deb ... 529s Unpacking librdkit-dev (202309.3-3) ... 529s Selecting previously unselected package libxslt1.1:arm64. 529s Preparing to unpack .../31-libxslt1.1_1.1.35-1_arm64.deb ... 529s Unpacking libxslt1.1:arm64 (1.1.35-1) ... 529s Selecting previously unselected package postgresql-client-16. 529s Preparing to unpack .../32-postgresql-client-16_16.2-1_arm64.deb ... 529s Unpacking postgresql-client-16 (16.2-1) ... 529s Selecting previously unselected package postgresql-16. 529s Preparing to unpack .../33-postgresql-16_16.2-1_arm64.deb ... 529s Unpacking postgresql-16 (16.2-1) ... 529s Selecting previously unselected package postgresql-16-rdkit. 529s Preparing to unpack .../34-postgresql-16-rdkit_202309.3-3_arm64.deb ... 529s Unpacking postgresql-16-rdkit (202309.3-3) ... 529s Selecting previously unselected package python3-numpy. 529s Preparing to unpack .../35-python3-numpy_1%3a1.24.2-2_arm64.deb ... 529s Unpacking python3-numpy (1:1.24.2-2) ... 529s Selecting previously unselected package rdkit-data. 529s Preparing to unpack .../36-rdkit-data_202309.3-3_all.deb ... 529s Unpacking rdkit-data (202309.3-3) ... 529s Selecting previously unselected package python3-rdkit. 529s Preparing to unpack .../37-python3-rdkit_202309.3-3_arm64.deb ... 529s Unpacking python3-rdkit (202309.3-3) ... 529s Selecting previously unselected package rdkit-doc. 529s Preparing to unpack .../38-rdkit-doc_202309.3-3_all.deb ... 529s Unpacking rdkit-doc (202309.3-3) ... 529s Selecting previously unselected package autopkgtest-satdep. 529s Preparing to unpack .../39-1-autopkgtest-satdep.deb ... 529s Unpacking autopkgtest-satdep (0) ... 529s Setting up postgresql-client-common (257) ... 529s Setting up libboost-python1.83.0 (1.83.0-2ubuntu1) ... 529s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 529s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 529s Setting up libxcb-render0:arm64 (1.15-1) ... 529s Setting up libpq5:arm64 (16.2-1) ... 529s Setting up fonts-freefont-ttf (20211204+svn4273-2) ... 529s Setting up libxcb-shm0:arm64 (1.15-1) ... 529s Setting up rdkit-data (202309.3-3) ... 529s Setting up libboost-serialization1.83.0:arm64 (1.83.0-2ubuntu1) ... 529s Setting up libblas3:arm64 (3.12.0-3) ... 530s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 530s Setting up ssl-cert (1.1.2ubuntu1) ... 531s Created symlink /etc/systemd/system/multi-user.target.wants/ssl-cert.service → /usr/lib/systemd/system/ssl-cert.service. 532s Setting up libboost-iostreams1.83.0:arm64 (1.83.0-2ubuntu1) ... 532s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 532s Setting up libjson-perl (4.10000-1) ... 532s Setting up libxslt1.1:arm64 (1.1.35-1) ... 532s Setting up libpython3.11-minimal:arm64 (3.11.8-1) ... 532s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 532s Setting up libcoordgen3:arm64 (3.0.2-1) ... 532s Setting up libllvm17:arm64 (1:17.0.6-5build1) ... 532s Setting up libpython3.12:arm64 (3.12.2-1) ... 532s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 532s Setting up python3.11-minimal (3.11.8-1) ... 532s Setting up liblapack3:arm64 (3.12.0-3) ... 532s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 532s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 533s Setting up libpython3.11-stdlib:arm64 (3.11.8-1) ... 533s Setting up postgresql-client-16 (16.2-1) ... 534s update-alternatives: using /usr/share/postgresql/16/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode 534s Setting up rdkit-doc (202309.3-3) ... 534s Setting up libmaeparser1:arm64 (1.3.1-1build1) ... 534s Setting up postgresql-common (257) ... 535s 535s Creating config file /etc/postgresql-common/createcluster.conf with new version 535s Building PostgreSQL dictionaries from installed myspell/hunspell packages... 535s Removing obsolete dictionary files: 536s Created symlink /etc/systemd/system/multi-user.target.wants/postgresql.service → /usr/lib/systemd/system/postgresql.service. 536s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 536s Setting up python3.11 (3.11.8-1) ... 537s Setting up postgresql-16 (16.2-1) ... 537s Creating new PostgreSQL cluster 16/main ... 537s /usr/lib/postgresql/16/bin/initdb -D /var/lib/postgresql/16/main --auth-local peer --auth-host scram-sha-256 --no-instructions 538s The files belonging to this database system will be owned by user "postgres". 538s This user must also own the server process. 538s 538s The database cluster will be initialized with locale "C.UTF-8". 538s The default database encoding has accordingly been set to "UTF8". 538s The default text search configuration will be set to "english". 538s 538s Data page checksums are disabled. 538s 538s fixing permissions on existing directory /var/lib/postgresql/16/main ... ok 538s creating subdirectories ... ok 538s selecting dynamic shared memory implementation ... posix 538s selecting default max_connections ... 100 538s selecting default shared_buffers ... 128MB 538s selecting default time zone ... Etc/UTC 538s creating configuration files ... ok 538s running bootstrap script ... ok 538s performing post-bootstrap initialization ... ok 538s syncing data to disk ... ok 542s Setting up libcairo2:arm64 (1.18.0-1) ... 542s Setting up python3-numpy (1:1.24.2-2) ... 544s Setting up librdkit1 (202309.3-3) ... 544s Setting up python3-rdkit (202309.3-3) ... 545s Setting up librdkit-dev (202309.3-3) ... 545s Setting up postgresql-16-rdkit (202309.3-3) ... 545s Setting up autopkgtest-satdep (0) ... 545s Processing triggers for systemd (255.2-3ubuntu2) ... 545s Processing triggers for man-db (2.12.0-3) ... 547s Processing triggers for libc-bin (2.39-0ubuntu2) ... 552s (Reading database ... 84776 files and directories currently installed.) 552s Removing autopkgtest-satdep (0) ... 553s autopkgtest [15:48:45]: test installcheck: [----------------------- 553s ### PostgreSQL 16 installcheck ### 553s Creating new PostgreSQL cluster 16/regress ... 557s make: Entering directory '/tmp/autopkgtest.faEgtM/build.bOd/src/Code/PgSQL/rdkit' 557s echo "# +++ regress install-check in +++" && /usr/lib/postgresql/16/lib/pgxs/src/makefiles/../../src/test/regress/pg_regress --inputdir=/tmp/autopkgtest.faEgtM/build.bOd/src --bindir='/usr/lib/postgresql/16/bin' --dbname=contrib_regression rdkit-91 props btree molgist bfpgist-91 bfpgin sfpgist slfpgist fps reaction fmcs query xqm 557s # +++ regress install-check in +++ 557s # using postmaster on localhost, port 5433 561s ok 1 - rdkit-91 3688 ms 561s ok 2 - props 135 ms 561s ok 3 - btree 477 ms 563s ok 4 - molgist 1556 ms 563s ok 5 - bfpgist-91 197 ms 563s ok 6 - bfpgin 174 ms 563s ok 7 - sfpgist 120 ms 563s ok 8 - slfpgist 121 ms 564s ok 9 - fps 461 ms 567s ok 10 - reaction 3258 ms 567s ok 11 - fmcs 239 ms 568s ok 12 - query 43 ms 568s ok 13 - xqm 381 ms 568s 1..13 568s # All 13 tests passed. 568s make: Leaving directory '/tmp/autopkgtest.faEgtM/build.bOd/src/Code/PgSQL/rdkit' 568s Dropping cluster 16/regress ... 568s ### End 16 installcheck ### 568s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 569s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 569s autopkgtest [15:49:01]: test installcheck: -----------------------] 570s installcheck PASS 570s autopkgtest [15:49:02]: test installcheck: - - - - - - - - - - results - - - - - - - - - - 570s autopkgtest [15:49:02]: @@@@@@@@@@@@@@@@@@@@ summary 570s installcheck PASS 582s Creating nova instance adt-noble-arm64-rdkit-20240319-153932-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240319.img (UUID 821fd622-e452-4ae8-b5c8-959e73b1612a)...