0s autopkgtest [21:45:58]: starting date and time: 2024-03-16 21:45:58+0000 0s autopkgtest [21:45:58]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:45:58]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nlzhuh2v/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-other-wasabi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-4.secgroup --name adt-noble-arm64-r-other-wasabi-20240316-214558-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 63s autopkgtest [21:47:01]: testbed dpkg architecture: arm64 63s autopkgtest [21:47:01]: testbed apt version: 2.7.12 63s autopkgtest [21:47:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 63s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 64s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 64s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 64s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 64s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3699 kB] 64s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 64s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 64s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 64s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 64s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4018 kB] 64s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 64s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 64s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 66s Fetched 9112 kB in 2s (4372 kB/s) 67s Reading package lists... 69s Reading package lists... 70s Building dependency tree... 70s Reading state information... 70s Calculating upgrade... 71s The following packages will be REMOVED: 71s libglib2.0-0 libssl3 71s The following NEW packages will be installed: 71s libglib2.0-0t64 libssl3t64 xdg-user-dirs 71s The following packages have been kept back: 71s curl 71s The following packages will be upgraded: 71s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 71s ubuntu-minimal ubuntu-standard 71s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 71s Need to get 4613 kB of archives. 71s After this operation, 211 kB of additional disk space will be used. 71s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 71s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 72s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 72s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 72s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 72s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 72s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 72s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 72s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 72s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 72s Fetched 4613 kB in 1s (5056 kB/s) 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 73s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 73s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 73s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 73s udisks2 depends on libglib2.0-0 (>= 2.77.0). 73s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 73s python3-gi depends on libglib2.0-0 (>= 2.77.0). 73s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 73s netplan.io depends on libglib2.0-0 (>= 2.70.0). 73s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 73s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 73s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 73s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 73s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 73s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 73s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 73s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 73s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 73s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 73s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 73s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 73s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 73s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 73s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 73s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 73s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 73s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 73s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 73s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 73s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 73s fwupd depends on libglib2.0-0 (>= 2.79.0). 73s bolt depends on libglib2.0-0 (>= 2.56.0). 73s 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 73s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 73s Selecting previously unselected package libglib2.0-0t64:arm64. 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 73s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 73s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 73s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 73s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 73s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 73s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 73s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 73s wget depends on libssl3 (>= 3.0.0). 73s u-boot-tools depends on libssl3 (>= 3.0.0). 73s tnftp depends on libssl3 (>= 3.0.0). 73s tcpdump depends on libssl3 (>= 3.0.0). 73s systemd-resolved depends on libssl3 (>= 3.0.0). 73s systemd depends on libssl3 (>= 3.0.0). 73s sudo depends on libssl3 (>= 3.0.0). 73s sbsigntool depends on libssl3 (>= 3.0.0). 73s rsync depends on libssl3 (>= 3.0.0). 73s python3-cryptography depends on libssl3 (>= 3.0.0). 73s openssh-server depends on libssl3 (>= 3.0.10). 73s openssh-client depends on libssl3 (>= 3.0.10). 73s mtd-utils depends on libssl3 (>= 3.0.0). 73s mokutil depends on libssl3 (>= 3.0.0). 73s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 73s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 73s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 73s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 73s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 73s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 73s libnvme1 depends on libssl3 (>= 3.0.0). 73s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 73s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 73s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 73s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 73s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 73s kmod depends on libssl3 (>= 3.0.0). 73s dhcpcd-base depends on libssl3 (>= 3.0.0). 73s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 73s 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 73s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 73s Selecting previously unselected package libssl3t64:arm64. 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 73s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 73s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 73s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 73s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 73s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 73s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 73s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 73s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 73s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 73s Unpacking ubuntu-minimal (1.536) over (1.535) ... 73s Selecting previously unselected package xdg-user-dirs. 73s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 73s Unpacking xdg-user-dirs (0.18-1) ... 73s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 73s Unpacking ubuntu-standard (1.536) over (1.535) ... 73s Setting up ubuntu-minimal (1.536) ... 73s Setting up xdg-user-dirs (0.18-1) ... 74s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 74s Setting up libtirpc-common (1.3.4+ds-1.1) ... 74s Setting up ubuntu-standard (1.536) ... 74s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 74s No schema files found: doing nothing. 74s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 74s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 74s Setting up openssl (3.0.13-0ubuntu1) ... 74s Setting up readline-common (8.2-3.1) ... 74s Processing triggers for man-db (2.12.0-3) ... 74s Processing triggers for install-info (7.1-3) ... 74s Processing triggers for libc-bin (2.39-0ubuntu2) ... 75s Reading package lists... 75s Building dependency tree... 75s Reading state information... 76s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 76s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 76s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 78s Reading package lists... 78s Reading package lists... 78s Building dependency tree... 78s Reading state information... 79s Calculating upgrade... 79s The following packages have been kept back: 79s curl 79s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 83s autopkgtest [21:47:21]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 83s autopkgtest [21:47:21]: @@@@@@@@@@@@@@@@@@@@ apt-source r-other-wasabi 85s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-other-wasabi 1.0.1-3 (dsc) [2089 B] 85s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-other-wasabi 1.0.1-3 (tar) [6709 B] 85s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-other-wasabi 1.0.1-3 (diff) [2396 B] 85s gpgv: Signature made Tue Dec 6 16:46:08 2022 UTC 85s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 85s gpgv: issuer "tille@debian.org" 85s gpgv: Can't check signature: No public key 85s dpkg-source: warning: cannot verify inline signature for ./r-other-wasabi_1.0.1-3.dsc: no acceptable signature found 85s autopkgtest [21:47:23]: testing package r-other-wasabi version 1.0.1-3 86s autopkgtest [21:47:24]: build not needed 88s autopkgtest [21:47:26]: test pkg-r-autopkgtest: preparing testbed 89s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Starting pkgProblemResolver with broken count: 0 90s Starting 2 pkgProblemResolver with broken count: 0 90s Done 90s The following additional packages will be installed: 90s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 90s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 90s fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu 90s gcc gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran 90s gfortran-13 gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu 90s hdf5-helpers icu-devtools libaec-dev libaec0 libasan8 libatomic1 libblas-dev 90s libblas3 libblosc1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 90s libcrypt-dev libcurl4-openssl-dev libcurl4t64 libdatrie1 libdeflate0 90s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 90s libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev 90s libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 90s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 90s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev 90s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 90s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 90s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 90s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpsl5t64 90s libreadline-dev libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev 90s libstdc++-13-dev libsz2 libtcl8.6 libthai-data libthai0 libtiff6 90s libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 90s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 90s linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 90s r-base-dev r-bioc-biocgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 90s r-bioc-rhdf5lib r-bioc-s4vectors r-cran-data.table r-cran-littler 90s r-cran-rjson r-other-wasabi rpcsvc-proto unzip x11-common xdg-utils zip 90s zlib1g-dev 90s Suggested packages: 90s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 90s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 90s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 90s liblapack-doc glibc-doc libcurl4-doc libidn-dev libkrb5-dev libldap2-dev 90s librtmp-dev libssh2-1-dev libhdf5-doc icu-doc liblzma-doc ncurses-doc 90s readline-doc libssl-doc libstdc++-13-doc tcl8.6 tk8.6 elpa-ess r-doc-info 90s | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 90s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 90s texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo 90s r-bioc-biobase r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray 90s r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy 90s r-bioc-deseq2 r-bioc-annotate r-cran-runit r-cran-bit64 r-bioc-biocstyle 90s r-cran-knitr r-cran-rmarkdown r-cran-testthat r-cran-bench r-cran-dplyr 90s r-cran-ggplot2 r-cran-mockery r-bioc-biocparallel r-cran-tinytest 90s r-bioc-summarizedexperiment r-cran-matrix r-bioc-shortread r-bioc-graph 90s r-cran-getopt 90s Recommended packages: 90s bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended 90s r-doc-html r-cran-bit64 r-cran-bit r-cran-curl r-cran-r.utils r-cran-xts 90s r-cran-nanotime r-cran-zoo r-cran-yaml r-cran-knitr r-cran-rmarkdown 90s r-cran-runit libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 90s x11-utils x11-xserver-utils 90s The following packages will be REMOVED: 90s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 90s The following NEW packages will be installed: 90s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 90s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 90s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu 90s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 90s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 90s gfortran-aarch64-linux-gnu hdf5-helpers icu-devtools libaec-dev libaec0 90s libasan8 libatomic1 libblas-dev libblas3 libblosc1 libbz2-dev libc-dev-bin 90s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4-openssl-dev libcurl4t64 90s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 90s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1 90s libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 90s libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libhwasan0 libice6 libicu-dev 90s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 90s libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev 90s libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 90s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 90s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 90s libpng16-16t64 libpsl5t64 libreadline-dev libreadline8t64 libsharpyuv0 90s libsm6 libsnappy1v5 libssl-dev libstdc++-13-dev libsz2 libtcl8.6 90s libthai-data libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 90s libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 90s libxt6t64 linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 90s r-base-core r-base-dev r-bioc-biocgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 90s r-bioc-rhdf5lib r-bioc-s4vectors r-cran-data.table r-cran-littler 90s r-cran-rjson r-other-wasabi rpcsvc-proto unzip x11-common xdg-utils zip 90s zlib1g-dev 90s The following packages will be upgraded: 90s curl 90s 1 upgraded, 135 newly installed, 5 to remove and 0 not upgraded. 90s Need to get 144 MB/144 MB of archives. 90s After this operation, 466 MB of additional disk space will be used. 90s Get:1 /tmp/autopkgtest.MF9N1q/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 91s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 91s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 91s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 91s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 91s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 91s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 91s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 91s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 91s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 91s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 91s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 91s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 91s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 91s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 91s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 91s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 91s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 91s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 91s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 91s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 91s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 91s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 91s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 91s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 91s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 91s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 92s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 92s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 92s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 92s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 92s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 92s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 92s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 92s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 92s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 92s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 92s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 92s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 92s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 92s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 92s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 92s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 92s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 92s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 92s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 93s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 93s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 93s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 93s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 93s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 93s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 93s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 hdf5-helpers arm64 1.10.10+repack-3ubuntu1 [15.5 kB] 93s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 93s Get:55 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 93s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 93s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 93s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB] 93s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB] 93s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 93s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 93s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 93s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 93s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 93s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 93s Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4-openssl-dev arm64 8.5.0-2ubuntu7 [454 kB] 93s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 93s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 93s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 93s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 93s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 93s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 93s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-cpp-103-1 arm64 1.10.10+repack-3ubuntu1 [120 kB] 93s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-fortran-102 arm64 1.10.10+repack-3ubuntu1 [86.3 kB] 93s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 93s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-fortran-100 arm64 1.10.10+repack-3ubuntu1 [30.7 kB] 93s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-cpp-100 arm64 1.10.10+repack-3ubuntu1 [10.7 kB] 93s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 93s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 93s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 93s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 93s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 93s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 93s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec-dev arm64 1.1.2-1 [18.8 kB] 93s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl-dev arm64 3.0.13-0ubuntu1 [2335 kB] 93s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-dev arm64 1.10.10+repack-3ubuntu1 [3036 kB] 93s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 93s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 93s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 94s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 94s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 94s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 94s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 94s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 94s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 94s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 94s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 94s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 94s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 94s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 94s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 94s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 94s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 94s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 94s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 94s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 94s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 95s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 95s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 95s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 95s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 95s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 95s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 95s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 95s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 95s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 95s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 95s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 95s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 95s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 95s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 95s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 95s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 95s Get:124 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 95s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 95s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 95s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 95s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 95s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5lib arm64 1.24.2+dfsg-1 [96.1 kB] 95s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5filters arm64 1.14.1+dfsg-3 [135 kB] 95s Get:131 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 96s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5 arm64 2.46.1+dfsg-1 [805 kB] 96s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-data.table arm64 1.14.10+dfsg-1 [1844 kB] 96s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 96s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 96s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 r-other-wasabi all 1.0.1-3 [27.9 kB] 96s Preconfiguring packages ... 97s Fetched 144 MB in 5s (26.8 MB/s) 97s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 97s wget depends on libpsl5 (>= 0.16.0). 97s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 97s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 97s 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 97s Removing libpsl5:arm64 (0.21.2-1build1) ... 97s Selecting previously unselected package libpsl5t64:arm64. 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 97s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 97s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 97s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 97s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 97s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 97s Selecting previously unselected package libcurl4t64:arm64. 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 97s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 97s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 97s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 97s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 97s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 97s 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 97s Removing libpng16-16:arm64 (1.6.43-1) ... 97s Selecting previously unselected package libpng16-16t64:arm64. 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 97s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 97s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 97s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 97s parted depends on libreadline8 (>= 6.0). 97s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 97s gpgsm depends on libreadline8 (>= 6.0). 97s gpgconf depends on libreadline8 (>= 6.0). 97s gpg depends on libreadline8 (>= 6.0). 97s gawk depends on libreadline8 (>= 6.0). 97s fdisk depends on libreadline8 (>= 6.0). 97s 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 97s Removing libreadline8:arm64 (8.2-3) ... 97s Selecting previously unselected package libreadline8t64:arm64. 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 97s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 97s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 97s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 97s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 97s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 97s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 97s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 97s lsof depends on libtirpc3 (>= 1.0.2). 97s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 97s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 97s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 97s iproute2 depends on libtirpc3 (>= 1.0.2). 97s 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 97s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 97s Selecting previously unselected package libtirpc3t64:arm64. 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 97s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 97s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 97s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 97s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 97s Selecting previously unselected package libc-dev-bin. 97s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 97s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 97s Selecting previously unselected package linux-libc-dev:arm64. 97s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 97s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 97s Selecting previously unselected package libcrypt-dev:arm64. 97s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 97s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 97s Selecting previously unselected package libtirpc-dev:arm64. 97s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 97s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 97s Selecting previously unselected package libnsl-dev:arm64. 97s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 97s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 98s Selecting previously unselected package rpcsvc-proto. 98s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 98s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 98s Selecting previously unselected package libc6-dev:arm64. 98s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 98s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 98s Selecting previously unselected package libisl23:arm64. 98s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 98s Unpacking libisl23:arm64 (0.26-3) ... 98s Selecting previously unselected package libmpc3:arm64. 98s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 98s Unpacking libmpc3:arm64 (1.3.1-1) ... 98s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 98s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 98s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 98s Selecting previously unselected package cpp-13. 98s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 98s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 98s Selecting previously unselected package cpp-aarch64-linux-gnu. 98s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 98s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 98s Selecting previously unselected package cpp. 98s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 98s Unpacking cpp (4:13.2.0-7ubuntu1) ... 98s Selecting previously unselected package libcc1-0:arm64. 98s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libgomp1:arm64. 98s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libitm1:arm64. 98s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libatomic1:arm64. 98s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libasan8:arm64. 98s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package liblsan0:arm64. 98s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libtsan2:arm64. 98s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libubsan1:arm64. 98s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libhwasan0:arm64. 98s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 98s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 98s Selecting previously unselected package libgcc-13-dev:arm64. 98s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 98s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 99s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 99s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 99s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 99s Selecting previously unselected package gcc-13. 99s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 99s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 99s Selecting previously unselected package gcc-aarch64-linux-gnu. 99s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 99s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 99s Selecting previously unselected package gcc. 99s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 99s Unpacking gcc (4:13.2.0-7ubuntu1) ... 99s Selecting previously unselected package libstdc++-13-dev:arm64. 99s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 99s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 99s Selecting previously unselected package g++-13-aarch64-linux-gnu. 99s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 99s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 99s Selecting previously unselected package g++-13. 99s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 99s Unpacking g++-13 (13.2.0-17ubuntu2) ... 99s Selecting previously unselected package g++-aarch64-linux-gnu. 99s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 99s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 99s Selecting previously unselected package g++. 99s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 99s Unpacking g++ (4:13.2.0-7ubuntu1) ... 99s Selecting previously unselected package build-essential. 99s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 99s Unpacking build-essential (12.10ubuntu1) ... 100s Selecting previously unselected package dctrl-tools. 100s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 100s Unpacking dctrl-tools (2.24-3build2) ... 100s Selecting previously unselected package fonts-dejavu-mono. 100s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-mono (2.37-8) ... 100s Selecting previously unselected package fonts-dejavu-core. 100s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-core (2.37-8) ... 100s Selecting previously unselected package fontconfig-config. 100s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 100s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 100s Selecting previously unselected package libfontconfig1:arm64. 100s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 100s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 100s Selecting previously unselected package fontconfig. 100s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 100s Unpacking fontconfig (2.15.0-1ubuntu1) ... 100s Selecting previously unselected package libgfortran5:arm64. 100s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 100s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 100s Selecting previously unselected package libgfortran-13-dev:arm64. 100s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 100s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 100s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 100s Preparing to unpack .../042-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 100s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 100s Selecting previously unselected package gfortran-13. 100s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 100s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 100s Selecting previously unselected package gfortran-aarch64-linux-gnu. 100s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 100s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 100s Selecting previously unselected package gfortran. 100s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 100s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 100s Selecting previously unselected package hdf5-helpers. 101s Preparing to unpack .../046-hdf5-helpers_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking hdf5-helpers (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package icu-devtools. 101s Preparing to unpack .../047-icu-devtools_74.2-1ubuntu1_arm64.deb ... 101s Unpacking icu-devtools (74.2-1ubuntu1) ... 101s Selecting previously unselected package libaec0:arm64. 101s Preparing to unpack .../048-libaec0_1.1.2-1_arm64.deb ... 101s Unpacking libaec0:arm64 (1.1.2-1) ... 101s Selecting previously unselected package libblas3:arm64. 101s Preparing to unpack .../049-libblas3_3.12.0-3_arm64.deb ... 101s Unpacking libblas3:arm64 (3.12.0-3) ... 101s Selecting previously unselected package libblas-dev:arm64. 101s Preparing to unpack .../050-libblas-dev_3.12.0-3_arm64.deb ... 101s Unpacking libblas-dev:arm64 (3.12.0-3) ... 101s Selecting previously unselected package libsnappy1v5:arm64. 101s Preparing to unpack .../051-libsnappy1v5_1.1.10-1_arm64.deb ... 101s Unpacking libsnappy1v5:arm64 (1.1.10-1) ... 101s Selecting previously unselected package libblosc1:arm64. 101s Preparing to unpack .../052-libblosc1_1.21.5+ds-1_arm64.deb ... 101s Unpacking libblosc1:arm64 (1.21.5+ds-1) ... 101s Selecting previously unselected package libbz2-dev:arm64. 101s Preparing to unpack .../053-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 101s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 101s Selecting previously unselected package libpixman-1-0:arm64. 101s Preparing to unpack .../054-libpixman-1-0_0.42.2-1_arm64.deb ... 101s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 101s Selecting previously unselected package libxcb-render0:arm64. 101s Preparing to unpack .../055-libxcb-render0_1.15-1_arm64.deb ... 101s Unpacking libxcb-render0:arm64 (1.15-1) ... 101s Selecting previously unselected package libxcb-shm0:arm64. 101s Preparing to unpack .../056-libxcb-shm0_1.15-1_arm64.deb ... 101s Unpacking libxcb-shm0:arm64 (1.15-1) ... 101s Selecting previously unselected package libxrender1:arm64. 101s Preparing to unpack .../057-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 101s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 101s Selecting previously unselected package libcairo2:arm64. 101s Preparing to unpack .../058-libcairo2_1.18.0-1_arm64.deb ... 101s Unpacking libcairo2:arm64 (1.18.0-1) ... 101s Selecting previously unselected package libcurl4-openssl-dev:arm64. 101s Preparing to unpack .../059-libcurl4-openssl-dev_8.5.0-2ubuntu7_arm64.deb ... 101s Unpacking libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 101s Selecting previously unselected package libdatrie1:arm64. 101s Preparing to unpack .../060-libdatrie1_0.2.13-3_arm64.deb ... 101s Unpacking libdatrie1:arm64 (0.2.13-3) ... 101s Selecting previously unselected package libdeflate0:arm64. 101s Preparing to unpack .../061-libdeflate0_1.19-1_arm64.deb ... 101s Unpacking libdeflate0:arm64 (1.19-1) ... 101s Selecting previously unselected package libgraphite2-3:arm64. 101s Preparing to unpack .../062-libgraphite2-3_1.3.14-2_arm64.deb ... 101s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 101s Selecting previously unselected package libharfbuzz0b:arm64. 101s Preparing to unpack .../063-libharfbuzz0b_8.3.0-2_arm64.deb ... 101s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 101s Selecting previously unselected package libsz2:arm64. 101s Preparing to unpack .../064-libsz2_1.1.2-1_arm64.deb ... 101s Unpacking libsz2:arm64 (1.1.2-1) ... 101s Selecting previously unselected package libhdf5-103-1:arm64. 101s Preparing to unpack .../065-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package libhdf5-cpp-103-1:arm64. 101s Preparing to unpack .../066-libhdf5-cpp-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package libhdf5-fortran-102:arm64. 101s Preparing to unpack .../067-libhdf5-fortran-102_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package libhdf5-hl-100:arm64. 101s Preparing to unpack .../068-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package libhdf5-hl-fortran-100:arm64. 101s Preparing to unpack .../069-libhdf5-hl-fortran-100_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package libhdf5-hl-cpp-100:arm64. 101s Preparing to unpack .../070-libhdf5-hl-cpp-100_1.10.10+repack-3ubuntu1_arm64.deb ... 101s Unpacking libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 101s Selecting previously unselected package zlib1g-dev:arm64. 101s Preparing to unpack .../071-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 101s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 101s Selecting previously unselected package libjpeg-turbo8:arm64. 101s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 101s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 101s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 101s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 101s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 101s Selecting previously unselected package libjpeg8:arm64. 101s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_arm64.deb ... 101s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 101s Selecting previously unselected package libjpeg8-dev:arm64. 101s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 101s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 101s Selecting previously unselected package libjpeg-dev:arm64. 101s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 101s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 101s Selecting previously unselected package libaec-dev:arm64. 102s Preparing to unpack .../077-libaec-dev_1.1.2-1_arm64.deb ... 102s Unpacking libaec-dev:arm64 (1.1.2-1) ... 102s Selecting previously unselected package libssl-dev:arm64. 102s Preparing to unpack .../078-libssl-dev_3.0.13-0ubuntu1_arm64.deb ... 102s Unpacking libssl-dev:arm64 (3.0.13-0ubuntu1) ... 102s Selecting previously unselected package libhdf5-dev. 102s Preparing to unpack .../079-libhdf5-dev_1.10.10+repack-3ubuntu1_arm64.deb ... 102s Unpacking libhdf5-dev (1.10.10+repack-3ubuntu1) ... 102s Selecting previously unselected package x11-common. 102s Preparing to unpack .../080-x11-common_1%3a7.7+23ubuntu2_all.deb ... 102s Unpacking x11-common (1:7.7+23ubuntu2) ... 102s Selecting previously unselected package libice6:arm64. 102s Preparing to unpack .../081-libice6_2%3a1.0.10-1build2_arm64.deb ... 102s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 102s Selecting previously unselected package libicu-dev:arm64. 102s Preparing to unpack .../082-libicu-dev_74.2-1ubuntu1_arm64.deb ... 102s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 102s Selecting previously unselected package liblapack3:arm64. 102s Preparing to unpack .../083-liblapack3_3.12.0-3_arm64.deb ... 102s Unpacking liblapack3:arm64 (3.12.0-3) ... 102s Selecting previously unselected package liblapack-dev:arm64. 102s Preparing to unpack .../084-liblapack-dev_3.12.0-3_arm64.deb ... 102s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 102s Selecting previously unselected package liblerc4:arm64. 102s Preparing to unpack .../085-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 102s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 102s Selecting previously unselected package libncurses-dev:arm64. 102s Preparing to unpack .../086-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 102s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 102s Selecting previously unselected package libthai-data. 102s Preparing to unpack .../087-libthai-data_0.1.29-2_all.deb ... 102s Unpacking libthai-data (0.1.29-2) ... 102s Selecting previously unselected package libthai0:arm64. 102s Preparing to unpack .../088-libthai0_0.1.29-2_arm64.deb ... 102s Unpacking libthai0:arm64 (0.1.29-2) ... 102s Selecting previously unselected package libpango-1.0-0:arm64. 102s Preparing to unpack .../089-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 102s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 102s Selecting previously unselected package libpangoft2-1.0-0:arm64. 103s Preparing to unpack .../090-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 103s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 103s Selecting previously unselected package libpangocairo-1.0-0:arm64. 103s Preparing to unpack .../091-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 103s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 103s Selecting previously unselected package libpaper1:arm64. 103s Preparing to unpack .../092-libpaper1_1.1.29_arm64.deb ... 103s Unpacking libpaper1:arm64 (1.1.29) ... 103s Selecting previously unselected package libpaper-utils. 103s Preparing to unpack .../093-libpaper-utils_1.1.29_arm64.deb ... 103s Unpacking libpaper-utils (1.1.29) ... 103s Selecting previously unselected package libpcre2-16-0:arm64. 103s Preparing to unpack .../094-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 103s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 103s Selecting previously unselected package libpcre2-32-0:arm64. 103s Preparing to unpack .../095-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 103s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 103s Selecting previously unselected package libpcre2-posix3:arm64. 103s Preparing to unpack .../096-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 103s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 103s Selecting previously unselected package libpcre2-dev:arm64. 103s Preparing to unpack .../097-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 103s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 103s Selecting previously unselected package libpkgconf3:arm64. 103s Preparing to unpack .../098-libpkgconf3_1.8.1-2_arm64.deb ... 103s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 103s Selecting previously unselected package libpng-dev:arm64. 103s Preparing to unpack .../099-libpng-dev_1.6.43-3_arm64.deb ... 103s Unpacking libpng-dev:arm64 (1.6.43-3) ... 103s Selecting previously unselected package libreadline-dev:arm64. 103s Preparing to unpack .../100-libreadline-dev_8.2-3.1_arm64.deb ... 103s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 103s Selecting previously unselected package libsharpyuv0:arm64. 103s Preparing to unpack .../101-libsharpyuv0_1.3.2-0.4_arm64.deb ... 103s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 103s Selecting previously unselected package libsm6:arm64. 103s Preparing to unpack .../102-libsm6_2%3a1.2.3-1build2_arm64.deb ... 103s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 103s Selecting previously unselected package libtcl8.6:arm64. 103s Preparing to unpack .../103-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 103s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 103s Selecting previously unselected package libjbig0:arm64. 103s Preparing to unpack .../104-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 103s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 103s Selecting previously unselected package libwebp7:arm64. 103s Preparing to unpack .../105-libwebp7_1.3.2-0.4_arm64.deb ... 103s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 103s Selecting previously unselected package libtiff6:arm64. 103s Preparing to unpack .../106-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 103s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 103s Selecting previously unselected package libxft2:arm64. 103s Preparing to unpack .../107-libxft2_2.3.6-1_arm64.deb ... 103s Unpacking libxft2:arm64 (2.3.6-1) ... 103s Selecting previously unselected package libxss1:arm64. 103s Preparing to unpack .../108-libxss1_1%3a1.2.3-1build2_arm64.deb ... 103s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 103s Selecting previously unselected package libtk8.6:arm64. 103s Preparing to unpack .../109-libtk8.6_8.6.13-2_arm64.deb ... 103s Unpacking libtk8.6:arm64 (8.6.13-2) ... 103s Selecting previously unselected package libxt6t64:arm64. 103s Preparing to unpack .../110-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 103s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 103s Selecting previously unselected package pkgconf-bin. 103s Preparing to unpack .../111-pkgconf-bin_1.8.1-2_arm64.deb ... 103s Unpacking pkgconf-bin (1.8.1-2) ... 103s Selecting previously unselected package pkgconf:arm64. 103s Preparing to unpack .../112-pkgconf_1.8.1-2_arm64.deb ... 103s Unpacking pkgconf:arm64 (1.8.1-2) ... 103s Selecting previously unselected package pkg-config:arm64. 103s Preparing to unpack .../113-pkg-config_1.8.1-2_arm64.deb ... 103s Unpacking pkg-config:arm64 (1.8.1-2) ... 103s Selecting previously unselected package zip. 103s Preparing to unpack .../114-zip_3.0-13_arm64.deb ... 103s Unpacking zip (3.0-13) ... 103s Selecting previously unselected package unzip. 103s Preparing to unpack .../115-unzip_6.0-28ubuntu3_arm64.deb ... 103s Unpacking unzip (6.0-28ubuntu3) ... 103s Selecting previously unselected package xdg-utils. 103s Preparing to unpack .../116-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 103s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 103s Selecting previously unselected package r-base-core. 103s Preparing to unpack .../117-r-base-core_4.3.3-2build1_arm64.deb ... 103s Unpacking r-base-core (4.3.3-2build1) ... 104s Selecting previously unselected package liblzma-dev:arm64. 104s Preparing to unpack .../118-liblzma-dev_5.4.5-0.3_arm64.deb ... 104s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 104s Selecting previously unselected package r-base-dev. 104s Preparing to unpack .../119-r-base-dev_4.3.3-2build1_all.deb ... 104s Unpacking r-base-dev (4.3.3-2build1) ... 104s Selecting previously unselected package pkg-r-autopkgtest. 104s Preparing to unpack .../120-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 104s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 104s Selecting previously unselected package r-bioc-biocgenerics. 104s Preparing to unpack .../121-r-bioc-biocgenerics_0.48.1-2_all.deb ... 104s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 104s Selecting previously unselected package r-bioc-rhdf5lib. 104s Preparing to unpack .../122-r-bioc-rhdf5lib_1.24.2+dfsg-1_arm64.deb ... 104s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 104s Selecting previously unselected package r-bioc-rhdf5filters. 104s Preparing to unpack .../123-r-bioc-rhdf5filters_1.14.1+dfsg-3_arm64.deb ... 104s Unpacking r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 104s Selecting previously unselected package r-bioc-s4vectors. 104s Preparing to unpack .../124-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 104s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 104s Selecting previously unselected package r-bioc-rhdf5. 104s Preparing to unpack .../125-r-bioc-rhdf5_2.46.1+dfsg-1_arm64.deb ... 104s Unpacking r-bioc-rhdf5 (2.46.1+dfsg-1) ... 104s Selecting previously unselected package r-cran-data.table. 104s Preparing to unpack .../126-r-cran-data.table_1.14.10+dfsg-1_arm64.deb ... 104s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 104s Selecting previously unselected package r-cran-littler. 104s Preparing to unpack .../127-r-cran-littler_0.3.19-1_arm64.deb ... 104s Unpacking r-cran-littler (0.3.19-1) ... 104s Selecting previously unselected package r-cran-rjson. 104s Preparing to unpack .../128-r-cran-rjson_0.2.21-1_arm64.deb ... 104s Unpacking r-cran-rjson (0.2.21-1) ... 104s Selecting previously unselected package r-other-wasabi. 104s Preparing to unpack .../129-r-other-wasabi_1.0.1-3_all.deb ... 104s Unpacking r-other-wasabi (1.0.1-3) ... 104s Selecting previously unselected package autopkgtest-satdep. 104s Preparing to unpack .../130-1-autopkgtest-satdep.deb ... 104s Unpacking autopkgtest-satdep (0) ... 104s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 104s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 104s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 104s Setting up libpaper1:arm64 (1.1.29) ... 104s 104s Creating config file /etc/papersize with new version 104s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 104s Setting up hdf5-helpers (1.10.10+repack-3ubuntu1) ... 104s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 104s Setting up libdatrie1:arm64 (0.2.13-3) ... 104s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 104s Setting up libxcb-render0:arm64 (1.15-1) ... 104s Setting up unzip (6.0-28ubuntu3) ... 104s Setting up x11-common (1:7.7+23ubuntu2) ... 105s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 105s Setting up libdeflate0:arm64 (1.19-1) ... 105s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 105s Setting up libxcb-shm0:arm64 (1.15-1) ... 105s Setting up libpaper-utils (1.1.29) ... 105s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 105s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 105s Setting up libaec0:arm64 (1.1.2-1) ... 105s Setting up libsnappy1v5:arm64 (1.1.10-1) ... 105s Setting up zip (3.0-13) ... 105s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 105s Setting up libblas3:arm64 (3.12.0-3) ... 105s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 105s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 105s Setting up libpkgconf3:arm64 (1.8.1-2) ... 105s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 105s Setting up fonts-dejavu-mono (2.37-8) ... 105s Setting up libssl-dev:arm64 (3.0.13-0ubuntu1) ... 105s Setting up libpng16-16t64:arm64 (1.6.43-3) ... 105s Setting up libmpc3:arm64 (1.3.1-1) ... 105s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 105s Setting up icu-devtools (74.2-1ubuntu1) ... 105s Setting up fonts-dejavu-core (2.37-8) ... 105s Setting up pkgconf-bin (1.8.1-2) ... 105s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 105s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libwebp7:arm64 (1.3.2-0.4) ... 105s Setting up libreadline8t64:arm64 (8.2-3.1) ... 105s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 105s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 105s Setting up libnsl-dev:arm64 (1.3.0-3) ... 105s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 105s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libblosc1:arm64 (1.21.5+ds-1) ... 105s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 105s Setting up libthai-data (0.1.29-2) ... 105s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 105s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libisl23:arm64 (0.26-3) ... 105s Setting up libc-dev-bin (2.39-0ubuntu2) ... 105s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 105s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 105s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 105s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libblas-dev:arm64 (3.12.0-3) ... 105s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 105s Setting up libsz2:arm64 (1.1.2-1) ... 105s Setting up dctrl-tools (2.24-3build2) ... 105s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 105s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 105s Setting up libice6:arm64 (2:1.0.10-1build2) ... 105s Setting up liblapack3:arm64 (3.12.0-3) ... 105s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 105s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 105s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 105s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 105s Setting up libaec-dev:arm64 (1.1.2-1) ... 105s Setting up pkgconf:arm64 (1.8.1-2) ... 105s Setting up libthai0:arm64 (0.1.29-2) ... 105s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 105s Setting up libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 105s Setting up liblapack-dev:arm64 (3.12.0-3) ... 105s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 105s Setting up pkg-config:arm64 (1.8.1-2) ... 105s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 105s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 105s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 105s Setting up libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 105s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 105s Setting up curl (8.5.0-2ubuntu7) ... 105s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 105s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 105s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 105s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 105s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 105s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 105s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 105s Setting up fontconfig (2.15.0-1ubuntu1) ... 107s Regenerating fonts cache... done. 107s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 107s Setting up libxft2:arm64 (2.3.6-1) ... 107s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 107s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 107s Setting up cpp-13 (13.2.0-17ubuntu2) ... 107s Setting up libtk8.6:arm64 (8.6.13-2) ... 107s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 107s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 107s Setting up libreadline-dev:arm64 (8.2-3.1) ... 107s Setting up libcairo2:arm64 (1.18.0-1) ... 107s Setting up libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 107s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... 107s Setting up gcc-13 (13.2.0-17ubuntu2) ... 107s Setting up libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 107s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 107s Setting up cpp (4:13.2.0-7ubuntu1) ... 107s Setting up libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 107s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 107s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 107s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 107s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 107s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 107s Setting up g++-13 (13.2.0-17ubuntu2) ... 107s Setting up libpng-dev:arm64 (1.6.43-3) ... 107s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 107s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 107s Setting up gcc (4:13.2.0-7ubuntu1) ... 107s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 107s Setting up r-base-core (4.3.3-2build1) ... 108s 108s Creating config file /etc/R/Renviron with new version 108s Setting up libhdf5-dev (1.10.10+repack-3ubuntu1) ... 108s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 108s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 108s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 108s Setting up r-cran-littler (0.3.19-1) ... 108s Setting up r-bioc-biocgenerics (0.48.1-2) ... 108s Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 108s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 108s Setting up r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 108s Setting up gfortran (4:13.2.0-7ubuntu1) ... 108s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 108s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 108s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 108s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 108s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 108s Setting up g++ (4:13.2.0-7ubuntu1) ... 108s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 108s Setting up build-essential (12.10ubuntu1) ... 108s Setting up r-cran-rjson (0.2.21-1) ... 108s Setting up r-base-dev (4.3.3-2build1) ... 108s Setting up r-bioc-rhdf5 (2.46.1+dfsg-1) ... 108s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 108s Setting up r-other-wasabi (1.0.1-3) ... 108s Setting up autopkgtest-satdep (0) ... 108s Processing triggers for man-db (2.12.0-3) ... 109s Processing triggers for install-info (7.1-3) ... 109s Processing triggers for libc-bin (2.39-0ubuntu2) ... 115s (Reading database ... 81348 files and directories currently installed.) 115s Removing autopkgtest-satdep (0) ... 115s autopkgtest [21:47:53]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 115s autopkgtest [21:47:53]: test pkg-r-autopkgtest: [----------------------- 116s Test: Try to load the R library wasabi 116s 116s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 116s Copyright (C) 2024 The R Foundation for Statistical Computing 116s Platform: aarch64-unknown-linux-gnu (64-bit) 116s 116s R is free software and comes with ABSOLUTELY NO WARRANTY. 116s You are welcome to redistribute it under certain conditions. 116s Type 'license()' or 'licence()' for distribution details. 116s 116s R is a collaborative project with many contributors. 116s Type 'contributors()' for more information and 116s 'citation()' on how to cite R or R packages in publications. 116s 116s Type 'demo()' for some demos, 'help()' for on-line help, or 116s 'help.start()' for an HTML browser interface to help. 116s Type 'q()' to quit R. 116s 116s > library('wasabi') 116s > 116s > 116s Other tests are currently unsupported! 116s They will be progressively added. 117s autopkgtest [21:47:55]: test pkg-r-autopkgtest: -----------------------] 117s autopkgtest [21:47:55]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 117s pkg-r-autopkgtest PASS 117s autopkgtest [21:47:55]: @@@@@@@@@@@@@@@@@@@@ summary 117s pkg-r-autopkgtest PASS 129s Creating nova instance adt-noble-arm64-r-other-wasabi-20240316-214558-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...