0s autopkgtest [20:15:48]: starting date and time: 2024-03-16 20:15:48+0000
  0s autopkgtest [20:15:48]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data
  0s autopkgtest [20:15:48]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ks72d82l/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-spatstat.random --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-15.secgroup --name adt-noble-arm64-r-cran-spatstat.random-20240316-201548-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
169s autopkgtest [20:18:37]: testbed dpkg architecture: arm64
169s autopkgtest [20:18:37]: testbed apt version: 2.7.12
169s autopkgtest [20:18:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup
170s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
170s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3704 kB]
170s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB]
170s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
170s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
170s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB]
170s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
170s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
170s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
170s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4012 kB]
171s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
171s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB]
171s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
172s Fetched 9112 kB in 2s (5237 kB/s)
173s Reading package lists...
175s Reading package lists...
175s Building dependency tree...
175s Reading state information...
176s Calculating upgrade...
176s The following packages will be REMOVED:
176s   libglib2.0-0 libssl3
176s The following NEW packages will be installed:
176s   libglib2.0-0t64 libssl3t64 xdg-user-dirs
176s The following packages have been kept back:
176s   curl
176s The following packages will be upgraded:
176s   gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common
176s   ubuntu-minimal ubuntu-standard
177s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded.
177s Need to get 4613 kB of archives.
177s After this operation, 211 kB of additional disk space will be used.
177s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB]
177s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB]
177s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB]
177s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB]
177s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB]
177s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B]
177s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
177s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB]
177s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB]
177s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB]
178s Fetched 4613 kB in 1s (5880 kB/s)
178s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
178s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ...
178s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
178s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested:
178s  udisks2 depends on libglib2.0-0 (>= 2.77.0).
178s  shared-mime-info depends on libglib2.0-0 (>= 2.75.3).
178s  python3-gi depends on libglib2.0-0 (>= 2.77.0).
178s  python3-dbus depends on libglib2.0-0 (>= 2.16.0).
178s  netplan.io depends on libglib2.0-0 (>= 2.70.0).
178s  netplan-generator depends on libglib2.0-0 (>= 2.70.0).
178s  libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0).
178s  libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0).
178s  libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
178s  libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56).
178s  libqmi-proxy depends on libglib2.0-0 (>= 2.30.0).
178s  libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0).
178s  libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
178s  libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
178s  libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3).
178s  libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0).
178s  libmbim-proxy depends on libglib2.0-0 (>= 2.56).
178s  libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56).
178s  libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
178s  libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3).
178s  libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3).
178s  libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
178s  libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0).
178s  libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0).
178s  libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3).
178s  libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2).
178s  fwupd depends on libglib2.0-0 (>= 2.79.0).
178s  bolt depends on libglib2.0-0 (>= 2.56.0).
178s 
178s (Reading database ... 
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178s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ...
178s Selecting previously unselected package libglib2.0-0t64:arm64.
178s (Reading database ... 
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178s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ...
178s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled...
178s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm'
178s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
178s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ...
178s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ...
178s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested:
178s  wget depends on libssl3 (>= 3.0.0).
178s  u-boot-tools depends on libssl3 (>= 3.0.0).
178s  tnftp depends on libssl3 (>= 3.0.0).
178s  tcpdump depends on libssl3 (>= 3.0.0).
178s  systemd-resolved depends on libssl3 (>= 3.0.0).
178s  systemd depends on libssl3 (>= 3.0.0).
178s  sudo depends on libssl3 (>= 3.0.0).
178s  sbsigntool depends on libssl3 (>= 3.0.0).
178s  rsync depends on libssl3 (>= 3.0.0).
178s  python3-cryptography depends on libssl3 (>= 3.0.0).
178s  openssh-server depends on libssl3 (>= 3.0.10).
178s  openssh-client depends on libssl3 (>= 3.0.10).
178s  mtd-utils depends on libssl3 (>= 3.0.0).
178s  mokutil depends on libssl3 (>= 3.0.0).
178s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
178s  libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0).
178s  libssh-4:arm64 depends on libssl3 (>= 3.0.0).
178s  libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0).
178s  libsasl2-2:arm64 depends on libssl3 (>= 3.0.0).
178s  libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0).
178s  libnvme1 depends on libssl3 (>= 3.0.0).
178s  libkrb5-3:arm64 depends on libssl3 (>= 3.0.0).
178s  libkmod2:arm64 depends on libssl3 (>= 3.0.0).
178s  libfido2-1:arm64 depends on libssl3 (>= 3.0.0).
178s  libcurl4:arm64 depends on libssl3 (>= 3.0.0).
178s  libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0).
178s  kmod depends on libssl3 (>= 3.0.0).
178s  dhcpcd-base depends on libssl3 (>= 3.0.0).
178s  bind9-libs:arm64 depends on libssl3 (>= 3.0.0).
178s 
178s (Reading database ... 
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178s Removing libssl3:arm64 (3.0.10-1ubuntu4) ...
178s Selecting previously unselected package libssl3t64:arm64.
178s (Reading database ... 
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(Reading database ... 74747 files and directories currently installed.)
178s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ...
178s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ...
179s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ...
179s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
179s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ...
179s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ...
179s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ...
179s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
179s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ...
179s Unpacking ubuntu-minimal (1.536) over (1.535) ...
179s Selecting previously unselected package xdg-user-dirs.
179s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ...
179s Unpacking xdg-user-dirs (0.18-1) ...
179s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ...
179s Unpacking ubuntu-standard (1.536) over (1.535) ...
179s Setting up ubuntu-minimal (1.536) ...
179s Setting up xdg-user-dirs (0.18-1) ...
179s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ...
179s Setting up libtirpc-common (1.3.4+ds-1.1) ...
179s Setting up ubuntu-standard (1.536) ...
179s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
179s No schema files found: doing nothing.
179s Setting up libglib2.0-data (2.79.3-3ubuntu5) ...
179s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ...
179s Setting up openssl (3.0.13-0ubuntu1) ...
179s Setting up readline-common (8.2-3.1) ...
179s Processing triggers for man-db (2.12.0-3) ...
180s Processing triggers for install-info (7.1-3) ...
180s Processing triggers for libc-bin (2.39-0ubuntu2) ...
180s Reading package lists...
181s Building dependency tree...
181s Reading state information...
181s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
182s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
182s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
182s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
182s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
183s Reading package lists...
183s Reading package lists...
183s Building dependency tree...
183s Reading state information...
184s Calculating upgrade...
184s The following packages have been kept back:
184s   curl
184s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
184s Reading package lists...
184s Building dependency tree...
184s Reading state information...
185s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
187s autopkgtest [20:18:55]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
188s autopkgtest [20:18:56]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-spatstat.random
190s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-spatstat.random 3.2-2-1 (dsc) [2396 B]
190s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-spatstat.random 3.2-2-1 (tar) [264 kB]
190s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-spatstat.random 3.2-2-1 (diff) [3220 B]
190s gpgv: Signature made Tue Jan  9 08:34:47 2024 UTC
190s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
190s gpgv:                issuer "tille@debian.org"
190s gpgv: Can't check signature: No public key
190s dpkg-source: warning: cannot verify inline signature for ./r-cran-spatstat.random_3.2-2-1.dsc: no acceptable signature found
190s autopkgtest [20:18:58]: testing package r-cran-spatstat.random version 3.2-2-1
191s autopkgtest [20:18:59]: build not needed
192s autopkgtest [20:19:00]: test run-unit-test: preparing testbed
193s Reading package lists...
193s Building dependency tree...
193s Reading state information...
194s Starting pkgProblemResolver with broken count: 0
194s Starting 2 pkgProblemResolver with broken count: 0
194s Done
195s The following additional packages will be installed:
195s   curl fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
195s   libblas3 libcairo2 libcurl4t64 libdatrie1 libdeflate0 libfontconfig1
195s   libgfortran5 libgomp1 libgraphite2-3 libgsl27 libgslcblas0 libharfbuzz0b
195s   libice6 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0
195s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
195s   libpng16-16t64 libpsl5t64 libreadline8t64 libsharpyuv0 libsm6 libtcl8.6
195s   libthai-data libthai0 libtiff6 libtirpc3t64 libtk8.6 libwebp7 libxcb-render0
195s   libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-abind
195s   r-cran-deldir r-cran-goftest r-cran-gsl r-cran-lattice r-cran-matrix
195s   r-cran-mgcv r-cran-nlme r-cran-polyclip r-cran-rpart r-cran-spatial
195s   r-cran-spatstat r-cran-spatstat.data r-cran-spatstat.explore
195s   r-cran-spatstat.geom r-cran-spatstat.linnet r-cran-spatstat.model
195s   r-cran-spatstat.random r-cran-spatstat.sparse r-cran-spatstat.utils
195s   r-cran-survival r-cran-tensor unzip x11-common xdg-utils zip
195s Suggested packages:
195s   gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html tcl8.6 tk8.6
195s   elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
195s Recommended packages:
195s   r-recommended r-base-dev r-doc-html r-cran-sm r-cran-locfit r-cran-nleqslv
195s   r-cran-glmnet libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
195s   x11-utils x11-xserver-utils
195s The following packages will be REMOVED:
195s   libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3
195s The following NEW packages will be installed:
195s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
195s   fonts-dejavu-mono libblas3 libcairo2 libcurl4t64 libdatrie1 libdeflate0
195s   libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 libgsl27 libgslcblas0
195s   libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblerc4
195s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
195s   libpaper1 libpixman-1-0 libpng16-16t64 libpsl5t64 libreadline8t64
195s   libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc3t64
195s   libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1
195s   libxt6t64 r-base-core r-cran-abind r-cran-deldir r-cran-goftest r-cran-gsl
195s   r-cran-lattice r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-polyclip
195s   r-cran-rpart r-cran-spatial r-cran-spatstat r-cran-spatstat.data
195s   r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet
195s   r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse
195s   r-cran-spatstat.utils r-cran-survival r-cran-tensor unzip x11-common
195s   xdg-utils zip
195s The following packages will be upgraded:
195s   curl
195s 1 upgraded, 74 newly installed, 5 to remove and 0 not upgraded.
195s Need to get 78.5 MB/78.5 MB of archives.
195s After this operation, 130 MB of additional disk space will be used.
195s Get:1 /tmp/autopkgtest.GXqL1B/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [756 B]
195s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB]
195s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB]
196s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB]
196s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB]
196s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
196s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB]
196s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
196s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
196s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
196s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
196s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB]
196s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB]
196s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
196s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
196s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
196s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
196s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
196s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB]
196s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
196s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
196s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
196s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
196s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libgslcblas0 arm64 2.7.1+dfsg-6ubuntu1 [72.5 kB]
196s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 libgsl27 arm64 2.7.1+dfsg-6ubuntu1 [912 kB]
196s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
196s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
196s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB]
196s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
196s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
196s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB]
196s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
196s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB]
196s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB]
196s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB]
196s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB]
196s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB]
196s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB]
196s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B]
196s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
196s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB]
196s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB]
196s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
196s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
196s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
196s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
196s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B]
196s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB]
196s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB]
196s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB]
196s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB]
196s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
196s Get:53 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB]
197s Get:54 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB]
197s Get:55 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-deldir arm64 2.0-4-1 [270 kB]
197s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB]
197s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gsl arm64 2.1-8-1 [489 kB]
197s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB]
197s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB]
197s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB]
197s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB]
197s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-polyclip arm64 1.10-6-1 [110 kB]
197s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB]
197s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rpart arm64 4.1.23-1 [660 kB]
197s Get:65 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatial arm64 7.3-17-1 [130 kB]
197s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.utils arm64 3.0-4-1 [360 kB]
197s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.data all 3.0-4-1 [4090 kB]
197s Get:68 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.geom arm64 3.2-8-1 [3805 kB]
197s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.random arm64 3.2-2-1 [1127 kB]
198s Get:70 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB]
198s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.sparse arm64 3.0-3-1 [214 kB]
198s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.explore arm64 3.2-5-1 [3264 kB]
198s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.model arm64 3.2-8-1 [3289 kB]
198s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.linnet arm64 3.1-3-1 [1404 kB]
198s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat arm64 3.0-7-1 [3817 kB]
199s Preconfiguring packages ...
199s Fetched 78.5 MB in 3s (25.0 MB/s)
199s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested:
199s  wget depends on libpsl5 (>= 0.16.0).
199s  libcurl4:arm64 depends on libpsl5 (>= 0.16.0).
199s  libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0).
199s 
199s (Reading database ... 
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(Reading database ... 74774 files and directories currently installed.)
199s Removing libpsl5:arm64 (0.21.2-1build1) ...
199s Selecting previously unselected package libpsl5t64:arm64.
199s (Reading database ... 
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(Reading database ... 74769 files and directories currently installed.)
199s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ...
199s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ...
199s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ...
199s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ...
199s (Reading database ... 
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(Reading database ... 74775 files and directories currently installed.)
199s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ...
199s Selecting previously unselected package libcurl4t64:arm64.
199s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 74770 files and directories currently installed.)
199s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ...
199s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ...
199s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested:
199s  libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2).
199s  libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1).
199s 
199s (Reading database ... 
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(Reading database ... 74776 files and directories currently installed.)
199s Removing libpng16-16:arm64 (1.6.43-1) ...
199s Selecting previously unselected package libpng16-16t64:arm64.
199s (Reading database ... 
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(Reading database ... 74766 files and directories currently installed.)
199s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ...
199s Unpacking libpng16-16t64:arm64 (1.6.43-3) ...
199s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
199s  parted depends on libreadline8 (>= 6.0).
199s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
199s  gpgsm depends on libreadline8 (>= 6.0).
199s  gpgconf depends on libreadline8 (>= 6.0).
199s  gpg depends on libreadline8 (>= 6.0).
199s  gawk depends on libreadline8 (>= 6.0).
199s  fdisk depends on libreadline8 (>= 6.0).
199s 
199s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74777 files and directories currently installed.)
199s Removing libreadline8:arm64 (8.2-3) ...
199s Selecting previously unselected package libreadline8t64:arm64.
199s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74765 files and directories currently installed.)
199s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ...
200s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
200s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
200s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
200s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
200s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
200s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested:
200s  lsof depends on libtirpc3 (>= 1.0.2).
200s  libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2).
200s  libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2).
200s  libnsl2:arm64 depends on libtirpc3 (>= 1.0.2).
200s  iproute2 depends on libtirpc3 (>= 1.0.2).
200s 
200s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74785 files and directories currently installed.)
200s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ...
200s Selecting previously unselected package libtirpc3t64:arm64.
200s (Reading database ... 
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(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74779 files and directories currently installed.)
200s Preparing to unpack .../00-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ...
200s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
200s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
200s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ...
200s Selecting previously unselected package fonts-dejavu-mono.
200s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
200s Unpacking fonts-dejavu-mono (2.37-8) ...
200s Selecting previously unselected package fonts-dejavu-core.
200s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
200s Unpacking fonts-dejavu-core (2.37-8) ...
200s Selecting previously unselected package fontconfig-config.
200s Preparing to unpack .../03-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
200s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
200s Selecting previously unselected package libfontconfig1:arm64.
200s Preparing to unpack .../04-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
200s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
200s Selecting previously unselected package fontconfig.
200s Preparing to unpack .../05-fontconfig_2.15.0-1ubuntu1_arm64.deb ...
200s Unpacking fontconfig (2.15.0-1ubuntu1) ...
200s Selecting previously unselected package libblas3:arm64.
200s Preparing to unpack .../06-libblas3_3.12.0-3_arm64.deb ...
200s Unpacking libblas3:arm64 (3.12.0-3) ...
200s Selecting previously unselected package libpixman-1-0:arm64.
200s Preparing to unpack .../07-libpixman-1-0_0.42.2-1_arm64.deb ...
200s Unpacking libpixman-1-0:arm64 (0.42.2-1) ...
200s Selecting previously unselected package libxcb-render0:arm64.
200s Preparing to unpack .../08-libxcb-render0_1.15-1_arm64.deb ...
200s Unpacking libxcb-render0:arm64 (1.15-1) ...
200s Selecting previously unselected package libxcb-shm0:arm64.
200s Preparing to unpack .../09-libxcb-shm0_1.15-1_arm64.deb ...
200s Unpacking libxcb-shm0:arm64 (1.15-1) ...
200s Selecting previously unselected package libxrender1:arm64.
200s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
200s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
200s Selecting previously unselected package libcairo2:arm64.
200s Preparing to unpack .../11-libcairo2_1.18.0-1_arm64.deb ...
200s Unpacking libcairo2:arm64 (1.18.0-1) ...
200s Selecting previously unselected package libdatrie1:arm64.
200s Preparing to unpack .../12-libdatrie1_0.2.13-3_arm64.deb ...
200s Unpacking libdatrie1:arm64 (0.2.13-3) ...
200s Selecting previously unselected package libdeflate0:arm64.
200s Preparing to unpack .../13-libdeflate0_1.19-1_arm64.deb ...
200s Unpacking libdeflate0:arm64 (1.19-1) ...
200s Selecting previously unselected package libgfortran5:arm64.
200s Preparing to unpack .../14-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
200s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
200s Selecting previously unselected package libgomp1:arm64.
200s Preparing to unpack .../15-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
200s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
200s Selecting previously unselected package libgraphite2-3:arm64.
200s Preparing to unpack .../16-libgraphite2-3_1.3.14-2_arm64.deb ...
200s Unpacking libgraphite2-3:arm64 (1.3.14-2) ...
200s Selecting previously unselected package libgslcblas0:arm64.
201s Preparing to unpack .../17-libgslcblas0_2.7.1+dfsg-6ubuntu1_arm64.deb ...
201s Unpacking libgslcblas0:arm64 (2.7.1+dfsg-6ubuntu1) ...
201s Selecting previously unselected package libgsl27:arm64.
201s Preparing to unpack .../18-libgsl27_2.7.1+dfsg-6ubuntu1_arm64.deb ...
201s Unpacking libgsl27:arm64 (2.7.1+dfsg-6ubuntu1) ...
201s Selecting previously unselected package libharfbuzz0b:arm64.
201s Preparing to unpack .../19-libharfbuzz0b_8.3.0-2_arm64.deb ...
201s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ...
201s Selecting previously unselected package x11-common.
201s Preparing to unpack .../20-x11-common_1%3a7.7+23ubuntu2_all.deb ...
201s Unpacking x11-common (1:7.7+23ubuntu2) ...
201s Selecting previously unselected package libice6:arm64.
201s Preparing to unpack .../21-libice6_2%3a1.0.10-1build2_arm64.deb ...
201s Unpacking libice6:arm64 (2:1.0.10-1build2) ...
201s Selecting previously unselected package libjpeg-turbo8:arm64.
201s Preparing to unpack .../22-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
201s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
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217s (Reading database ... 78015 files and directories currently installed.)
217s Removing autopkgtest-satdep (0) ...
218s autopkgtest [20:19:26]: test run-unit-test: [-----------------------
219s BEGIN TEST RMH.R
220s 
220s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
220s Copyright (C) 2024 The R Foundation for Statistical Computing
220s Platform: aarch64-unknown-linux-gnu (64-bit)
220s 
220s R is free software and comes with ABSOLUTELY NO WARRANTY.
220s You are welcome to redistribute it under certain conditions.
220s Type 'license()' or 'licence()' for distribution details.
220s 
220s R is a collaborative project with many contributors.
220s Type 'contributors()' for more information and
220s 'citation()' on how to cite R or R packages in publications.
220s 
220s Type 'demo()' for some demos, 'help()' for on-line help, or
220s 'help.start()' for an HTML browser interface to help.
220s Type 'q()' to quit R.
220s 
220s > #'
220s > #'   Header for all (concatenated) test files
220s > #'
220s > #'   Require spatstat.random
220s > #'   Obtain environment variable controlling tests.
220s > #'
220s > #'   $Revision: 1.5 $ $Date: 2020/04/30 05:31:37 $
220s > 
220s > require(spatstat.random)
220s Loading required package: spatstat.random
220s Loading required package: spatstat.data
222s Loading required package: spatstat.geom
222s spatstat.geom 3.2-8
222s spatstat.random 3.2-2
222s > FULLTEST <- (nchar(Sys.getenv("SPATSTAT_TEST", unset="")) > 0)
222s > ALWAYS   <- TRUE
222s > cat(paste("--------- Executing",
222s +           if(FULLTEST) "** ALL **" else "**RESTRICTED** subset of",
222s +           "test code -----------\n"))
222s --------- Executing **RESTRICTED** subset of test code -----------
222s > #
222s > #  tests/rmhAux.R
222s > #
222s > #  $Revision: 1.2 $  $Date: 2020/05/01 02:42:58 $
222s > #
222s > #  For interactions which maintain 'auxiliary data',
222s > #  verify that the auxiliary data are correctly updated.
222s > #
222s > #  To do this we run rmh with nsave=1 so that the point pattern state
222s > #  is saved after every iteration, then the algorithm is restarted,
222s > #  and the auxiliary data are re-initialised. The final state must agree with
222s > #  the result of simulation without saving.
222s > # ----------------------------------------------------
222s > 
222s > if(ALWAYS) { # involves C code
222s + local({
222s + 
222s +    # Geyer:
222s +    mod <- list(cif="geyer",
222s +                par=list(beta=1.25,gamma=1.6,r=0.2,sat=4.5),
222s +                w=square(10))
222s + 
222s +    set.seed(42)
222s +    X.nosave <- rmh(model=mod,
222s +                    start=list(n.start=50),
222s +                    control=list(nrep=1e3, periodic=FALSE, expand=1))
222s +    set.seed(42)
222s +    X.save <- rmh(model=mod,
222s +                  start=list(n.start=50),
222s +                  control=list(nrep=1e3, periodic=FALSE, expand=1,
222s +                    nburn=0, nsave=1, pstage="start"))
222s +    #' Need to set pstage='start' so that proposals are generated
222s +    #' at the start of the procedure in both cases.
222s + 
222s +    stopifnot(npoints(X.save) == npoints(X.nosave))
222s +    stopifnot(max(nncross(X.save, X.nosave)$dist) == 0)
222s +    stopifnot(max(nncross(X.nosave, X.save)$dist) == 0)
222s + })
222s + }
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
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222s Extracting proposal points...Running Metropolis-Hastings.
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222s Extracting proposal points...Running Metropolis-Hastings.
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222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s Extracting proposal points...Running Metropolis-Hastings.
222s > ##
222s > ##   tests/rmhBasic.R
222s > ##
222s > ##   $Revision: 1.23 $  $Date: 2020/05/01 02:42:58 $
222s > #
222s > # Test examples for rmh.default
222s > # run to reasonable length
222s > # and with tests for validity added
222s > # ----------------------------------------------------
222s > 
222s > local({
222s + 
222s +   if(!exists("nr") || is.null(nr)) nr <- 1000
222s +   nrlong <- 2e3
222s +   spatstat.options(expand=1.05)
222s + 
222s +   if(ALWAYS) {  ## fundamental C code
222s +     ## Strauss process.
222s +     mod01 <- list(cif="strauss",
222s +                   par=list(beta=2,gamma=0.2,r=0.7),
222s +                   w=c(0,10,0,10))
222s +     X1.strauss <- rmh(model=mod01,
222s +                       start=list(n.start=80),
222s +                       control=list(nrep=nr))
222s +     X1.strauss2 <- rmh(model=mod01,
222s +                        start=list(n.start=80),
222s +                        control=list(nrep=nr, periodic=FALSE))
222s + 
222s +     ## Strauss process, conditioning on n = 80:
222s +     X2.strauss <- rmh(model=mod01,start=list(n.start=80),
222s +                       control=list(p=1,nrep=nr))
222s +     stopifnot(npoints(X2.strauss) == 80)
222s + 
222s +     ## test tracking mechanism
222s +     X1.strauss <- rmh(model=mod01,start=list(n.start=80),
222s +                       control=list(nrep=nr), track=TRUE)
222s +     X2.strauss <- rmh(model=mod01,start=list(n.start=80),
222s +                       control=list(p=1,nrep=nr), track=TRUE)
222s +    
222s +     ## Hard core process:
222s +     mod02 <- list(cif="hardcore",par=list(beta=2,hc=0.7),w=c(0,10,0,10))
222s +     X3.hardcore <- rmh(model=mod02,start=list(n.start=60),
222s +                        control=list(nrep=nr))
222s +     X3.hardcore2 <- rmh(model=mod02,start=list(n.start=60),
222s +                         control=list(nrep=nr, periodic=FALSE))
222s + 
222s +     ## Strauss process equal to pure hardcore:
222s +     mod02 <- list(cif="strauss",par=list(beta=2,gamma=0,r=0.7),w=c(0,10,0,10))
222s +     X3.strauss <- rmh(model=mod02,start=list(n.start=60),
222s +                       control=list(nrep=nr))
222s +    
222s +     ## Strauss process in a polygonal window.
222s +     x     <- c(0.55,0.68,0.75,0.58,0.39,0.37,0.19,0.26,0.42)
222s +     y     <- c(0.20,0.27,0.68,0.99,0.80,0.61,0.45,0.28,0.33)
222s +     mod03 <- list(cif="strauss",par=list(beta=2000,gamma=0.6,r=0.07),
222s +                   w=owin(poly=list(x=x,y=y)))
222s +     X4.strauss <- rmh(model=mod03,start=list(n.start=90),
222s +                       control=list(nrep=nr))
222s +    
222s +     ## Strauss process in a polygonal window, conditioning on n = 42.
222s +     X5.strauss <- rmh(model=mod03,start=list(n.start=42),
222s +                       control=list(p=1,nrep=nr))
222s +     stopifnot(npoints(X5.strauss) == 42)
222s + 
222s +     ## Strauss process, starting off from X4.strauss, but with the
222s +     ## polygonal window replace by a rectangular one.  At the end,
222s +     ## the generated pattern is clipped to the original polygonal window.
222s +     xxx <- X4.strauss
222s +     xxx$window <- as.owin(c(0,1,0,1))
222s +     X6.strauss <- rmh(model=mod03,start=list(x.start=xxx),
222s +                       control=list(nrep=nr))
222s +    
222s +     ## Strauss with hardcore:
222s +     mod04 <- list(cif="straush",par=list(beta=2,gamma=0.2,r=0.7,hc=0.3),
222s +                   w=c(0,10,0,10))
222s +     X1.straush <- rmh(model=mod04,start=list(n.start=70),
222s +                       control=list(nrep=nr))
222s +     X1.straush2 <- rmh(model=mod04,start=list(n.start=70),
222s +                        control=list(nrep=nr, periodic=FALSE))
222s +    
222s +     ## Another Strauss with hardcore (with a perhaps surprising result):
222s +     mod05 <- list(cif="straush",par=list(beta=80,gamma=0.36,r=45,hc=2.5),
222s +                   w=c(0,250,0,250))
222s +     X2.straush <- rmh(model=mod05,start=list(n.start=250),
222s +                       control=list(nrep=nr))
222s +    
222s +     ## Pure hardcore (identical to X3.strauss).
222s +     mod06 <- list(cif="straush",par=list(beta=2,gamma=1,r=1,hc=0.7),
222s +                   w=c(0,10,0,10))
222s +     X3.straush <- rmh(model=mod06,start=list(n.start=60),
222s +                       control=list(nrep=nr))
222s + 
222s +     ## Fiksel
222s +     modFik <- list(cif="fiksel",
222s +                    par=list(beta=180,r=0.15,hc=0.07,kappa=2,a= -1.0),
222s +                    w=square(1))
222s +     X.fiksel <- rmh(model=modFik,start=list(n.start=10),
222s +                     control=list(nrep=nr))
222s +     X.fiksel2 <- rmh(model=modFik,start=list(n.start=10),
222s +                      control=list(nrep=nr,periodic=FALSE))
222s + 
222s +     ## Penttinen process:
222s +     modpen <- rmhmodel(cif="penttinen",par=list(beta=2,gamma=0.6,r=1),
222s +                        w=c(0,10,0,10))
222s +     X.pen <- rmh(model=modpen,start=list(n.start=10),
222s +                  control=list(nrep=nr))
222s +     X.pen2 <- rmh(model=modpen,start=list(n.start=10),
222s +                   control=list(nrep=nr, periodic=FALSE))
222s +     ## equivalent to hardcore
222s +     modpen$par$gamma <- 0
222s +     X.penHard <- rmh(model=modpen,start=list(n.start=3),
222s +                      control=list(nrep=nr))
222s + 
222s +     ## Area-interaction, inhibitory
222s +     mod.area <- list(cif="areaint",
222s +                      par=list(beta=2,eta=0.5,r=0.5),
222s +                      w=square(10))
222s +     X.area <- rmh(model=mod.area,start=list(n.start=60),
222s +                   control=list(nrep=nr))
222s +     X.areaE <- rmh(model=mod.area,start=list(n.start=60),
222s +                    control=list(nrep=nr, periodic=FALSE))
222s + 
222s +     ## Area-interaction, clustered
222s +     mod.area2 <- list(cif="areaint", par=list(beta=2,eta=1.5,r=0.5),
222s +                       w=square(10))
222s +     X.area2 <- rmh(model=mod.area2,start=list(n.start=60),
222s +                    control=list(nrep=nr))
222s + 
222s +     ## Area-interaction close to hard core
222s +     set.seed(42)
222s +     mod.area0 <- list(cif="areaint",par=list(beta=2,eta=1e-300,r=0.35),
222s +                       w=square(10))
222s +     X.area0 <- rmh(model=mod.area0,start=list(x.start=X3.hardcore),
222s +                    control=list(nrep=nrlong))
222s +     stopifnot(nndist(X.area0) > 0.6)
222s +    
222s +     ## Soft core:
222s +     w    <- c(0,10,0,10)
222s +     mod07 <- list(cif="sftcr",par=list(beta=0.8,sigma=0.1,kappa=0.5),
222s +                   w=c(0,10,0,10))
222s +     X.sftcr <- rmh(model=mod07,start=list(n.start=70),
222s +                    control=list(nrep=nr))
222s +     X.sftcr2 <- rmh(model=mod07,start=list(n.start=70),
222s +                     control=list(nrep=nr, periodic=FALSE))
222s +    
222s +     ## Diggle, Gates, and Stibbard:
222s +     mod12 <- list(cif="dgs",par=list(beta=3600,rho=0.08),w=c(0,1,0,1))
222s +     X.dgs <- rmh(model=mod12,start=list(n.start=300),
222s +                  control=list(nrep=nr))
222s +     X.dgs2 <- rmh(model=mod12,start=list(n.start=300),
222s +                   control=list(nrep=nr, periodic=FALSE))
222s +    
222s +     ## Diggle-Gratton:
222s +     mod13 <- list(cif="diggra",
222s +                   par=list(beta=1800,kappa=3,delta=0.02,rho=0.04),
222s +                   w=square(1))
222s +     X.diggra <- rmh(model=mod13,start=list(n.start=300),
222s +                     control=list(nrep=nr))
222s +     X.diggra2 <- rmh(model=mod13,start=list(n.start=300),
222s +                      control=list(nrep=nr, periodic=FALSE))
222s +    
222s +     ## Geyer:
222s +     mod14 <- list(cif="geyer",par=list(beta=1.25,gamma=1.6,r=0.2,sat=4.5),
222s +                   w=c(0,10,0,10))
222s +     X1.geyer <- rmh(model=mod14,start=list(n.start=200),
222s +                     control=list(nrep=nr))
222s +    
222s +     ## Geyer; same as a Strauss process with parameters
222s +     ## (beta=2.25,gamma=0.16,r=0.7):
222s +     mod15 <- list(cif="geyer",par=list(beta=2.25,gamma=0.4,r=0.7,sat=10000),
222s +                   w=c(0,10,0,10))
222s +     X2.geyer <- rmh(model=mod15,start=list(n.start=200),
222s +                     control=list(nrep=nr))
222s +     X2.geyer2 <- rmh(model=mod15,start=list(n.start=200),
222s +                      control=list(nrep=nr, periodic=FALSE))
222s +    
222s +     mod16 <- list(cif="geyer",par=list(beta=8.1,gamma=2.2,r=0.08,sat=3))
222s +     X3.geyer <- rmh(model=mod16,start=list(x.start=redwood),
222s +                     control=list(periodic=TRUE,nrep=nr))
222s +     X3.geyer2 <- rmh(model=mod16,start=list(x.start=redwood),
222s +                      control=list(periodic=FALSE,nrep=nr))
222s +    
222s +     ## Geyer, starting from the redwood data set, simulating
222s +     ## on a torus, and conditioning on n:
222s +     X4.geyer <- rmh(model=mod16,start=list(x.start=redwood),
222s +                     control=list(p=1,periodic=TRUE,nrep=nr))
222s + 
222s +     ## Lookup (interaction function h_2 from page 76, Diggle (2003)):
222s +     r <- seq(from=0,to=0.2,length=101)[-1] # Drop 0.
222s +     h <- 20*(r-0.05)
222s +     h[r<0.05] <- 0
222s +     h[r>0.10] <- 1
222s +     mod17 <- list(cif="lookup",par=list(beta=4000,h=h,r=r),w=c(0,1,0,1))
222s +     X.lookup <- rmh(model=mod17,start=list(n.start=100),
222s +                     control=list(nrep=nr, periodic=TRUE))
222s +     X.lookup2 <- rmh(model=mod17,start=list(n.start=100),
222s +                      control=list(nrep=nr, expand=1, periodic=FALSE))
222s +     ## irregular
222s +     mod17x <- mod17
222s +     mod17x$par$r <- 0.05*sqrt(mod17x$par$r/0.05)
222s +     X.lookupX <- rmh(model=mod17x,start=list(n.start=100),
222s +                      control=list(nrep=nr, periodic=TRUE))
222s +     X.lookupX2 <- rmh(model=mod17x,start=list(n.start=100),
222s +                       control=list(nrep=nr, expand=1, periodic=FALSE))
222s + 
222s +     ## Strauss with trend
222s +     tr <- function(x,y){x <- x/250; y <- y/250;
222s +       exp((6*x + 5*y - 18*x^2 + 12*x*y - 9*y^2)/6)
222s +     }
222s +     beta <- 0.3
222s +     gmma <- 0.5
222s +     r    <- 45
222s +     tr3   <- function(x,y){x <- x/250; y <- y/250;
222s +       exp((6*x + 5*y - 18*x^2 + 12*x*y - 9*y^2)/6)
222s +     }
222s +     ## log quadratic trend
222s +     mod17 <- list(cif="strauss",
222s +                   par=list(beta=beta,gamma=gmma,r=r),w=c(0,250,0,250),
222s +                   trend=tr3)
222s +     X1.strauss.trend <- rmh(model=mod17,start=list(n.start=90),
222s +                             control=list(nrep=nr))
222s + 
222s +     #' trend is an image
222s +     mod18 <- mod17
222s +     mod18$trend <- as.im(mod18$trend, square(10))
222s +     X1.strauss.trendim <- rmh(model=mod18,start=list(n.start=90),
222s +                               control=list(nrep=nr))
222s + 
222s +   }
222s +   if(FULLTEST) {
222s +     #'.....  Test other code blocks .................
222s + 
222s +     #' argument passing to rmhcontrol
222s +     X1S <- rmh(model=mod01, control=NULL, nrep=nr)
222s +     X1f <- rmh(model=mod01, fixall=TRUE,  nrep=nr) # issues a warning
222s +   }
222s + 
222s +   if(ALWAYS) {
222s +     #'  nsim > 1
222s +     Xlist <- rmh(model=mod01,start=list(n.start=80),
222s +                  control=list(nrep=nr),
222s +                  nsim=2)
222s +     #' Condition on contents of window
222s +     XX <- Xlist[[1]]
222s +     YY <- XX[square(2)]
222s +     XXwindow <- rmh(model=mod01, start=list(n.start=80),
222s +                     control=list(nrep=nr, x.cond=YY))
222s +     XXwindowTrend <- rmh(model=mod17, start=list(n.start=80),
222s +                          control=list(nrep=nr, x.cond=YY))
222s + 
222s +     #' Palm conditioning
222s +     XXpalm <- rmh(model=mod01,start=list(n.start=80),
222s +                   control=list(nrep=nr, x.cond=coords(YY)))
222s +     XXpalmTrend <- rmh(model=mod17,start=list(n.start=80),
222s +                        control=list(nrep=nr, x.cond=coords(YY)))
222s + 
222s +     #' nsave, nburn
222s +     chq <- function(X) {
222s +       Xname <- deparse(substitute(X))
222s +       A <- attr(X, "saved")
222s +       if(length(A) == 0)
222s +         stop(paste(Xname, "did not include a saved list of patterns"))
222s +       return("ok")
222s +     }
222s +     XXburn <- rmh(model=mod01,start=list(n.start=80), verbose=FALSE,
222s +                   control=list(nrep=nr, nsave=500, nburn=100))
222s +     chq(XXburn)
222s +     XXburnTrend <- rmh(model=mod17,start=list(n.start=80), verbose=FALSE,
222s +                        control=list(nrep=nr, nsave=500, nburn=100))
222s +     chq(XXburnTrend)
222s +     XXburn0 <- rmh(model=mod01,start=list(n.start=80), verbose=FALSE,
222s +                    control=list(nrep=nr, nsave=500, nburn=0))
222s +     chq(XXburn0)
222s +     XXsaves <- rmh(model=mod01,start=list(n.start=80), verbose=FALSE,
222s +                    control=list(nrep=nr, nsave=c(500, 200)))
222s +     chq(XXsaves)
222s +     XXsaves0 <- rmh(model=mod01,start=list(n.start=80), verbose=FALSE,
222s +                     control=list(nrep=nr, nsave=c(500, 200), nburn=0))
222s +     chq(XXsaves0)
222s +   }
222s + 
222s +   if(FULLTEST) {
222s +     #' code blocks for various interactions, not otherwise tested
222s +     rr <- seq(0,0.2,length=8)[-1]
222s +     gmma <- c(0.5,0.6,0.7,0.8,0.7,0.6,0.5)
222s +     mod18 <- list(cif="badgey",par=list(beta=4000, gamma=gmma,r=rr,sat=5),
222s +                   w=square(1))
222s +     Xbg <- rmh(model=mod18,start=list(n.start=20),
222s +                control=list(nrep=1e4, periodic=TRUE))
222s +     Xbg2 <- rmh(model=mod18,start=list(n.start=20),
222s +                 control=list(nrep=1e4, periodic=FALSE))
222s +     #' supporting classes
222s +     rs <- rmhstart()
222s +     print(rs)
222s +     rs <- rmhstart(x.start=cells)
222s +     print(rs)
222s +     rc <- rmhcontrol(x.cond=as.list(as.data.frame(cells)))
222s +     print(rc)
222s +     rc <- rmhcontrol(x.cond=as.data.frame(cells)[FALSE, , drop=FALSE])
222s +     print(rc)
222s +     rc <- rmhcontrol(nsave=100, ptypes=c(0.7, 0.3), x.cond=amacrine)
222s +     print(rc)
222s +     rc <- rmhcontrol(ptypes=c(0.7, 0.3), x.cond=as.data.frame(amacrine))
222s +     print(rc)
222s +   }
222s + 
222s + })
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
222s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
222s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Generating 2 point patterns...
225s 1, 
225s 2.
225s Done.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s > reset.spatstat.options()
225s > ##
225s > ##     tests/rmhErrors.R
225s > ##
225s > ##     $Revision: 1.6 $ $Date: 2020/05/01 02:42:58 $
225s > ##
225s > # Things which should cause an error
225s > 
225s > if(ALWAYS) {
225s +   local({
225s +     if(!exists("nv")) nv <- 0
225s +     if(!exists("nr")) nr <- 1e3
225s +     ## Strauss with zero intensity and p = 1
225s +     mod0S <- list(cif="strauss",par=list(beta=0,gamma=0.6,r=0.7), w = square(3))
225s +     out <- try(X0S <- rmh(model=mod0S,start=list(n.start=80),
225s +                           control=list(p=1,nrep=nr,nverb=nv),verbose=FALSE))
225s +     if(!inherits(out, "try-error"))
225s +       stop("Error not trapped (Strauss with zero intensity and p = 1) in tests/rmhErrors.R")
225s +   })
225s + }
225s Error : beta = 0 implies an empty pattern, but we are simulating conditional on a nonzero number of points
225s > 
225s > 
225s > 
225s > #
225s > # tests/rmhExpand.R
225s > #
225s > # test decisions about expansion of simulation window
225s > #
225s > #  $Revision: 1.9 $  $Date: 2022/10/23 01:17:33 $
225s > #
225s > 
225s > local({
225s +   if(FULLTEST) {
225s +     ## rmhexpand class 
225s +     a <- summary(rmhexpand(area=2))
225s +     print(a)
225s +     b <- summary(rmhexpand(length=4))
225s +     print(b)
225s +     print(summary(rmhexpand(distance=2)))
225s +     print(summary(rmhexpand(square(2))))
225s +   }
225s + })
225s > 
225s > 
225s > 
225s > #
225s > #  tests/rmhMulti.R
225s > #
225s > #  tests of rmh.default, running multitype point processes
225s > #
225s > #   $Revision: 1.17 $  $Date: 2022/01/05 02:07:32 $
225s > 
225s > local({
225s +   if(!exists("nr"))  nr <- 2e3
225s +   if(!exists("nv"))  nv <- 0
225s +   spatstat.options(expand=1.05)
225s + 
225s +   if(FULLTEST) {
225s +     ## Multitype Poisson
225s +     modp2 <- list(cif="poisson",
225s +                   par=list(beta=2), types=letters[1:3], w = square(10))
225s +     Xp2 <- rmh(modp2, start=list(n.start=0), control=list(p=1))
225s + 
225s +     ## Multinomial 
225s +     Xp2fix <- rmh(modp2, start=list(n.start=c(10,20,30)),
225s +                   control=list(fixall=TRUE, p=1))
225s +     Xp2fixr <- rmh(modp2, start=list(x.start=Xp2fix),
225s +                    control=list(fixall=TRUE, p=1))
225s +   }
225s + 
225s +   if(ALWAYS) { ## Gibbs models => C code
225s +   
225s +     ## Multitype Strauss:
225s +     beta <- c(0.027,0.008)
225s +     gmma <- matrix(c(0.43,0.98,0.98,0.36),2,2)
225s +     r    <- matrix(c(45,45,45,45),2,2)
225s +     mod08 <- list(cif="straussm",par=list(beta=beta,gamma=gmma,radii=r),
225s +                   w=c(0,250,0,250))
225s +     X1.straussm <- rmh(model=mod08,start=list(n.start=80),
225s +                        control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv))
225s +    
225s +     ## Multitype Strauss equivalent to hard core:
225s +     mod08hard <- mod08
225s +     mod08hard$par$gamma[] <- 0
225s +     X1.straussm.Hard <- rmh(model=mod08hard,start=list(n.start=20),
225s +                             control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv),
225s +                             periodic=FALSE)
225s +     X1.straussmP.Hard <- rmh(model=mod08hard,start=list(n.start=20),
225s +                              control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv),
225s +                              periodic=TRUE)
225s +    
225s +     ## Multitype Strauss conditioning upon the total number
225s +     ## of points being 80:
225s +     X2.straussm <- rmh(model=mod08,start=list(n.start=80),
225s +                        control=list(p=1,ptypes=c(0.75,0.25),nrep=nr,
225s +                                     nverb=nv))
225s +     stopifnot(X2.straussm$n == 80)
225s + 
225s +     ## Conditioning upon the number of points of type 1 being 60
225s +     ## and the number of points of type 2 being 20:
225s +     X3.straussm <- rmh(model=mod08,start=list(n.start=c(60,20)),
225s +                        control=list(fixall=TRUE,p=1,ptypes=c(0.75,0.25),
225s +                                     nrep=nr,nverb=nv))
225s +     stopifnot(all(table(X3.straussm$marks) == c(60,20)))
225s + 
225s +     ## Multitype hardcore:
225s +     rhc  <- matrix(c(9.1,5.0,5.0,2.5),2,2)
225s +     mod087 <- list(cif="multihard",par=list(beta=5*beta,hradii=rhc),
225s +                    w=square(12))
225s +     cheque <- function(X, r) {
225s +       Xname <- deparse(substitute(X))
225s +       nn <- minnndist(X, by=marks(X))
225s +       print(nn)
225s +       if(!all(nn >= r, na.rm=TRUE))
225s +         stop(paste(Xname, "violates hard core constraint"), call.=FALSE)
225s +       return(invisible(NULL))
225s +     }
225s +     #' make an initial state that violates hard core
225s +     #' (cannot use 'x.start' here because it disables thinning)
225s +     #' and check that result satisfies hard core
225s +     set.seed(19171025)
225s +     X.multihard.close <- rmh(model=mod087,start=list(n.start=100),
225s +                              control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv),
225s +                              periodic=FALSE)
225s +     cheque(X.multihard.close, rhc)
225s +     X.multihard.closeP <- rmh(model=mod087,start=list(n.start=100),
225s +                               control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv,
225s +                                            periodic=TRUE))
225s +     cheque(X.multihard.closeP, rhc)
225s + 
225s +     ## Multitype Strauss hardcore:
225s +     mod09 <- list(cif="straushm",
225s +                   par=list(beta=5*beta,gamma=gmma,
225s +                            iradii=r,hradii=rhc),w=square(12))
225s +     X.straushm <- rmh(model=mod09,start=list(n.start=100),
225s +                       control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv),
225s +                       periodic=FALSE)
225s +     X.straushmP <- rmh(model=mod09,start=list(n.start=100),
225s +                        control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv,
225s +                                     periodic=TRUE))
225s + 
225s +     ## Multitype Strauss hardcore equivalent to multitype hardcore:
225s +     mod09hard <- mod09
225s +     mod09hard$par$gamma[] <- 0
225s +     X.straushm.hard <- rmh(model=mod09hard,start=list(n.start=15),
225s +                            control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv,
225s +                                         periodic=FALSE))
225s +     X.straushmP.hard <- rmh(model=mod09hard,start=list(n.start=15),
225s +                             control=list(ptypes=c(0.75,0.25),nrep=nr,nverb=nv),
225s +                             periodic=TRUE)
225s + 
225s +     ## Multitype Strauss hardcore with trends for each type:
225s +     beta  <- c(0.27,0.08)
225s +     tr3   <- function(x,y){x <- x/250; y <- y/250;
225s +       exp((6*x + 5*y - 18*x^2 + 12*x*y - 9*y^2)/6)
225s +     } # log quadratic trend
225s +     tr4   <- function(x,y){x <- x/250; y <- y/250; exp(-0.6*x+0.5*y)}
225s +                         # log linear trend
225s +     mod10 <- list(cif="straushm",
225s +                   par=list(beta=beta,gamma=gmma,
225s +                            iradii=r,hradii=rhc),w=c(0,250,0,250),
225s +                   trend=list(tr3,tr4))
225s +     X1.straushm.trend <- rmh(model=mod10,start=list(n.start=350),
225s +                              control=list(ptypes=c(0.75,0.25),
225s +                                           nrep=nr,nverb=nv))
225s +    
225s +     ## Multitype Strauss hardcore with trends for each type, given as images:
225s +     bigwin <- square(250)
225s +     i1 <- as.im(tr3, bigwin)
225s +     i2 <- as.im(tr4, bigwin)
225s +     mod11 <- list(cif="straushm",par=list(beta=beta,gamma=gmma,
225s +                                           iradii=r,hradii=rhc),w=bigwin,
225s +                   trend=list(i1,i2))
225s +     X2.straushm.trend <- rmh(model=mod11,start=list(n.start=350),
225s +                              control=list(ptypes=c(0.75,0.25),expand=1,
225s +                                           nrep=nr,nverb=nv))
225s + 
225s +     #' nsave, nburn
225s +     chq <- function(X) {
225s +       Xname <- deparse(substitute(X))
225s +       A <- attr(X, "saved")
225s +       if(length(A) == 0)
225s +         stop(paste(Xname, "did not include a saved list of patterns"))
225s +       return("ok")
225s +     }
225s +     XburnMS <- rmh(model=mod08,start=list(n.start=80), verbose=FALSE,
225s +                    control=list(ptypes=c(0.75,0.25),
225s +                                 nrep=nr,nsave=500, nburn=100))
225s +     chq(XburnMS)
225s +     XburnMStrend <- rmh(model=mod10,start=list(n.start=350), verbose=FALSE,
225s +                         control=list(ptypes=c(0.75,0.25),
225s +                                      nrep=nr,nsave=500, nburn=100))
225s +     chq(XburnMStrend)
225s + 
225s +     
225s + #######################################################################
225s + ############  checks on distribution of output  #######################
225s + #######################################################################
225s + 
225s +     checkp <- function(p, context, testname, failmessage, pcrit=0.01) {
225s +       if(missing(failmessage))
225s +         failmessage <- paste("output failed", testname)
225s +       if(p < pcrit)
225s +         warning(paste(context, ",",  failmessage), call.=FALSE)
225s +       cat(paste("\n", context, ",", testname, "has p-value", signif(p,4), "\n"))
225s +     }
225s + 
225s +     ## Multitype Strauss code; output is multitype Poisson
225s + 
225s +     beta  <- 100 * c(1,1)
225s +     ri    <- matrix(0.07, 2, 2)
225s +     gmma  <- matrix(1, 2, 2)  # no interaction
225s +     tr1   <- function(x,y){ rep(1, length(x)) }
225s +     tr2   <- function(x,y){ rep(2, length(x)) }
225s +     mod <- rmhmodel(cif="straussm",
225s +                     par=list(beta=beta,gamma=gmma,radii=ri),
225s +                     w=owin(),
225s +                     trend=list(tr1,tr2))
225s + 
225s +     X <- rmh(mod, start=list(n.start=0), control=list(nrep=1e6))
225s + 
225s +     ## The model is Poisson with intensity 100 for type 1 and 200 for type 2.
225s +     ## Total number of points is Poisson (300)
225s +     ## Marks are i.i.d. with P(type 1) = 1/3, P(type 2) = 2/3.
225s +     
225s +     ## Test whether the total intensity looks right
225s +     ##
225s +     p <- ppois(X$n, 300)
225s +     p.val <- 2 * min(p, 1-p)
225s +     checkp(p.val, 
225s +            "In multitype Poisson simulation",
225s +            "test whether total number of points has required mean value")
225s + 
225s +     ## Test whether the mark distribution looks right
225s +     ta <- table(X$marks)
225s +     cat("Frequencies of marks:")
225s +     print(ta)
225s +     checkp(chisq.test(ta, p = c(1,2)/3)$p.value,
225s +            "In multitype Poisson simulation",
225s +            "chi-squared goodness-of-fit test for mark distribution (1/3, 2/3)")
225s + 
225s + #####
225s + ####  multitype Strauss code; fixall=TRUE;
225s + ####  output is multinomial process with nonuniform locations
225s + ####
225s + 
225s +     the.context <- "In nonuniform multinomial simulation"
225s + 
225s +     beta  <- 100 * c(1,1)
225s +     ri    <- matrix(0.07, 2, 2)
225s +     gmma  <- matrix(1, 2, 2)  # no interaction
225s +     tr1   <- function(x,y){ ifelse(x < 0.5, 0, 2) } 
225s +     tr2   <- function(x,y){ ifelse(y < 0.5, 1, 3) }
225s +     ## cdf of these distributions
225s +     Fx1 <- function(x) { ifelse(x < 0.5, 0, ifelse(x < 1, 2 * x - 1, 1)) }
225s +     Fy2 <- function(y) { ifelse(y < 0, 0,
225s +                          ifelse(y < 0.5, y/2,
225s +                          ifelse(y < 1, (1/2 + 3 * (y-1/2))/2, 1))) }
225s +                                                                
225s + 
225s +     mod <- rmhmodel(cif="straussm",
225s +                     par=list(beta=beta,gamma=gmma,radii=ri),
225s +                     w=owin(),
225s +                     trend=list(tr1,tr2))
225s + 
225s +     X <- rmh(mod, start=list(n.start=c(50,50)),
225s +              control=list(nrep=1e6, expand=1, p=1, fixall=TRUE))
225s + 
225s +     ## The model is Poisson 
225s +     ## Mean number of type 1 points = 100
225s +     ## Mean number of type 2 points = 200
225s +     ## Total intensity = 300
225s +     ## Marks are i.i.d. with P(type 1) = 1/3, P(type 2) = 2/3
225s + 
225s +     ## Test whether the coordinates look OK
225s +     Y <- split(X)
225s +     X1 <- Y[[names(Y)[1]]]
225s +     X2 <- Y[[names(Y)[2]]]
225s +     checkp(ks.test(X1$y, "punif")$p.value,
225s +            the.context,
225s +            "Kolmogorov-Smirnov test of uniformity of y coordinates of type 1 points")
225s +     if(any(X1$x < 0.5)) {
225s +       stop(paste(the.context, ",", 
225s +                  "x-coordinates of type 1 points are IMPOSSIBLE"), call.=FALSE)
225s +     } else {
225s +       checkp(ks.test(Fx1(X1$x), "punif")$p.value,
225s +              the.context,
225s +              "Kolmogorov-Smirnov test of uniformity of transformed x coordinates of type 1 points")
225s +     }
225s +     checkp(ks.test(X2$x, "punif")$p.value,
225s +            the.context,
225s +            "Kolmogorov-Smirnov test of uniformity of x coordinates of type 2 points")
225s +     checkp(ks.test(Fy2(X2$y), "punif")$p.value,
225s +            the.context,
225s +            "Kolmogorov-Smirnov test of uniformity of transformed y coordinates of type 2 points")
225s +   }
225s +   
225s + })
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s     1   2
225s 1  NA  NA
225s 2 Inf Inf
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
225s     1        2
225s 1  NA       NA
225s 2 Inf 6.779136
225s Checking arguments..determining simulation windows...Starting simulation.
225s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
226s Checking arguments..determining simulation windows...Starting simulation.
226s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
226s Checking arguments..determining simulation windows...Starting simulation.
226s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
226s Checking arguments..determining simulation windows...Starting simulation.
226s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
226s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
226s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
226s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
227s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
227s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
227s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
229s 
229s  In multitype Poisson simulation , test whether total number of points has required mean value has p-value 0.3403 
229s Frequencies of marks:
229s   1   2 
229s 105 211 
229s 
229s  In multitype Poisson simulation , chi-squared goodness-of-fit test for mark distribution (1/3, 2/3) has p-value 0.9683 
229s Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
230s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
230s 
230s  In nonuniform multinomial simulation , Kolmogorov-Smirnov test of uniformity of y coordinates of type 1 points has p-value 0.5201 
230s 
230s  In nonuniform multinomial simulation , Kolmogorov-Smirnov test of uniformity of transformed x coordinates of type 1 points has p-value 0.3822 
230s 
230s  In nonuniform multinomial simulation , Kolmogorov-Smirnov test of uniformity of x coordinates of type 2 points has p-value 0.9497 
230s 
230s  In nonuniform multinomial simulation , Kolmogorov-Smirnov test of uniformity of transformed y coordinates of type 2 points has p-value 0.5247 
230s > 
230s > reset.spatstat.options()
230s > #
230s > #   tests/rmhWeird.R
230s > #
230s > #   $Revision: 1.5 $  $Date: 2022/01/05 02:08:29 $
230s > #
230s > #   Test strange boundary cases in rmh.default
230s > 
230s > local({
230s +    if(!exists("nv"))  nv <- 0
230s +    if(!exists("nr"))  nr <- 2e3
230s + 
230s +    if(FULLTEST) {
230s +      ## Poisson process
230s +      cat("Poisson\n")
230s +      modP <- list(cif="poisson",par=list(beta=10), w = square(3))
230s +      XP <- rmh(model = modP,
230s +                start = list(n.start=25),
230s +                control=list(nrep=nr,nverb=nv))
230s +    }
230s + 
230s +    if(ALWAYS) {
230s +      ## Poisson process case of Strauss
230s +      cat("\nPoisson case of Strauss\n")
230s +      modPS <- list(cif="strauss",par=list(beta=10,gamma=1,r=0.7), w = square(3))
230s +      XPS <- rmh(model=modPS,
230s +                 start=list(n.start=25),
230s +                 control=list(nrep=nr,nverb=nv))
230s +    
230s +      ## Strauss with zero intensity
230s +      cat("\nStrauss with zero intensity\n")
230s +      mod0S <- list(cif="strauss",
230s +                    par=list(beta=0,gamma=0.6,r=0.7), w = square(3))
230s + Warning message:
230s beta = 0 implies an empty pattern 
230s      X0S   <- rmh(model=mod0S,start=list(n.start=80),
230s +                   control=list(nrep=nr,nverb=nv))
230s +      stopifnot(X0S$n == 0)
230s +    }
230s + 
230s +    if(FULLTEST) {
230s +      ## Poisson with zero intensity
230s +      cat("\nPoisson with zero intensity\n")
230s +      mod0P <- list(cif="poisson",par=list(beta=0), w = square(3))
230s +      X0P <- rmh(model = mod0P,
230s +                 start = list(n.start=25),
230s +                 control=list(nrep=nr,nverb=nv))
230s + 
230s + 
230s +      ## Poisson conditioned on zero points
230s +      cat("\nPoisson conditioned on zero points\n")
230s +      modp <- list(cif="poisson",
230s +                   par=list(beta=2), w = square(10))
230s +      Xp <- rmh(modp, start=list(n.start=0), control=list(p=1, nrep=nr))
230s +      stopifnot(Xp$n == 0)
230s + 
230s +      ## Multitype Poisson conditioned on zero points
230s +      cat("\nMultitype Poisson conditioned on zero points\n")
230s +      modp2 <- list(cif="poisson",
230s +                    par=list(beta=2), types=letters[1:3], w = square(10))
230s +      Xp2 <- rmh(modp2, start=list(n.start=0), control=list(p=1, nrep=nr))
230s +      stopifnot(is.marked(Xp2))
230s +      stopifnot(Xp2$n == 0)
230s + 
230s +      ## Multitype Poisson conditioned on zero points of each type
230s +      cat("\nMultitype Poisson conditioned on zero points of each type\n")
230s +      Xp2fix <- rmh(modp2, start=list(n.start=c(0,0,0)),
230s +                    control=list(p=1, fixall=TRUE, nrep=nr))
230s +      stopifnot(is.marked(Xp2fix))
230s +      stopifnot(Xp2fix$n == 0)
230s +     
230s +    }
230s + })
230s 
230s Poisson case of Strauss
230s Checking arguments..determining simulation windows...Starting simulation.
230s Initial state...Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
230s 
230s Strauss with zero intensity
230s Checking arguments..determining simulation windows...
230s > 
230s > #
230s > #    tests/rmhmodelHybrids.R
230s > #
230s > #  Test that rmhmodel.ppm and rmhmodel.default
230s > #  work on Hybrid interaction models
230s > #
230s > #   $Revision: 1.6 $  $Date: 2022/10/23 01:17:56 $
230s > #
230s > 
230s > if(ALWAYS) { # involves C code
230s + local({
230s +     
230s + 
230s +   # ............ rmhmodel.default ............................
230s + 
230s +    modH <- list(cif=c("strauss","geyer"),
230s +                 par=list(list(beta=50,gamma=0.5, r=0.1),
230s +                          list(beta=1, gamma=0.7, r=0.2, sat=2)),
230s +                 w = square(1))
230s +    rmodH <- rmhmodel(modH)
230s +    rmodH
230s +    reach(rmodH)
230s + 
230s +   # test handling of Poisson components
230s + 
230s +    modHP <- list(cif=c("poisson","strauss"),
230s +                  par=list(list(beta=5),
230s +                           list(beta=10,gamma=0.5, r=0.1)),
230s +                  w = square(1))
230s +    rmodHP <- rmhmodel(modHP)
230s +    rmodHP
230s +    reach(rmodHP)
230s + 
230s +    modPP <- list(cif=c("poisson","poisson"),
230s +                  par=list(list(beta=5),
230s +                           list(beta=10)),
230s +                  w = square(1))
230s +    rmodPP <- rmhmodel(modPP)
230s +    rmodPP
230s +    reach(rmodPP)
230s + 
230s + })
230s + }
230s [1] 0
230s > 
230s > #'
230s > #'   tests/rmhsnoopy.R
230s > #'
230s > #'   Test the rmh interactive debugger
230s > #' 
230s > #'   $Revision: 1.11 $  $Date: 2022/10/23 01:19:00 $
230s > 
230s > if(ALWAYS) { # may depend on platform
230s + local({
230s +   R <- 0.1
230s +   ## define a model and prepare to simulate
230s +   W <- Window(amacrine)
230s +   t1 <- as.im(function(x,y){exp(8.2+0.22*x)}, W)
230s +   t2 <- as.im(function(x,y){exp(8.3+0.22*x)}, W)
230s +   model <- rmhmodel(cif="strauss",
230s +                     trend=solist(off=t1, on=t2),
230s +                     par=list(gamma=0.47, r=R, beta=c(off=1, on=1)))
230s +   siminfo <- rmh(model, preponly=TRUE)
230s +   Wsim <- siminfo$control$internal$w.sim
230s +   Wclip <- siminfo$control$internal$w.clip
230s +   if(is.null(Wclip)) Wclip <- Window(cells)
230s + 
230s +   ## determine debugger interface panel geometry
230s +   Xinit <- runifpoint(ex=amacrine)[1:40]
230s +   P <- rmhsnoop(Wsim=Wsim, Wclip=Wclip, R=R,
230s +                 xcoords=Xinit$x,
230s +                 ycoords=Xinit$y,
230s +                 mlevels=levels(marks(Xinit)),
230s +                 mcodes=as.integer(marks(Xinit)) - 1L,
230s +                 irep=3L, itype=1L,
230s +                 proptype=1, proplocn=c(0.5, 0.5), propmark=0, propindx=0,
230s +                 numerator=42, denominator=24,
230s +                 panel.only=TRUE)
230s +   boxes <- P$boxes
230s +   clicknames <- names(P$clicks)
230s +   boxcentres <- do.call(concatxy, lapply(boxes, centroid.owin))
230s + 
230s +   ## design a sequence of clicks
230s +   actionsequence <- c("Up", "Down", "Left", "Right",
230s +                       "At Proposal", "Zoom Out", "Zoom In", "Reset",
230s +                       "Accept", "Reject", "Print Info",
230s +                       "Next Iteration", "Next Shift", "Next Death",
230s +                       "Skip 10", "Skip 100", "Skip 1000", "Skip 10,000",
230s +                       "Skip 100,000", "Exit Debugger")
230s +   actionsequence <- match(actionsequence, clicknames)
230s +   actionsequence <- actionsequence[!is.na(actionsequence)]
230s +   xy <- lapply(boxcentres, "[", actionsequence)
230s + 
230s +   ## queue the click sequence
230s +   spatstat.utils::queueSpatstatLocator(xy$x,xy$y)
230s + 
230s +   ## go
230s +   rmh(model, snoop=TRUE)
230s + })
230s + }
230s Checking arguments..determining simulation windows...Evaluating trend integral...Checking arguments..determining simulation windows...Evaluating trend integral...Starting simulation.
230s Initial state...
230s Creating debugger environment..Done.
230s Ready to simulate. Generating proposal points...Running Metropolis-Hastings.
232s 
232s 
232s ------------------- 
232s Iteration 0
232s Simulation window:
232s window: binary image mask
232s 128 x 128 pixel array (ny, nx)
232s enclosing rectangle: [0, 1.6012085] x [0, 1] units (one unit = 662 microns)
232s Clipping window:
232s window: binary image mask
232s 128 x 128 pixel array (ny, nx)
232s enclosing rectangle: [0, 1.6012085] x [0, 1] units (one unit = 662 microns)
232s Current state:
232s Marked planar point pattern: 77 points
232s Multitype, with levels = 1, 2 
232s window: binary image mask
232s 128 x 128 pixel array (ny, nx)
232s enclosing rectangle: [0, 1.6012085] x [0, 1] units (one unit = 662 microns)
232s Proposal type: Shift
232s Shift data point 52 from current location (1.32766, 0.809129, “2”) to new 
232s location (0.226844, 0.527324, “2”)
232s Hastings ratio =  15447.5170183325 / 15447.5170183325 = 1
232s Fate of proposal: Rejected
234s Marked planar point pattern: 344 points
234s Multitype, with levels = 1, 2 
234s window: binary image mask
234s 128 x 128 pixel array (ny, nx)
234s enclosing rectangle: [0, 1.6012085] x [0, 1] units (one unit = 662 microns)
234s Pattern was generated by Metropolis-Hastings simulation.
234s > 
234s BEGIN TEST Random.R
235s 
235s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
235s Copyright (C) 2024 The R Foundation for Statistical Computing
235s Platform: aarch64-unknown-linux-gnu (64-bit)
235s 
235s R is free software and comes with ABSOLUTELY NO WARRANTY.
235s You are welcome to redistribute it under certain conditions.
235s Type 'license()' or 'licence()' for distribution details.
235s 
235s R is a collaborative project with many contributors.
235s Type 'contributors()' for more information and
235s 'citation()' on how to cite R or R packages in publications.
235s 
235s Type 'demo()' for some demos, 'help()' for on-line help, or
235s 'help.start()' for an HTML browser interface to help.
235s Type 'q()' to quit R.
235s 
235s > #'
235s > #'   Header for all (concatenated) test files
235s > #'
235s > #'   Require spatstat.random
235s > #'   Obtain environment variable controlling tests.
235s > #'
235s > #'   $Revision: 1.5 $ $Date: 2020/04/30 05:31:37 $
235s > 
235s > require(spatstat.random)
235s Loading required package: spatstat.random
235s Loading required package: spatstat.data
236s Loading required package: spatstat.geom
236s spatstat.geom 3.2-8
236s spatstat.random 3.2-2
236s > FULLTEST <- (nchar(Sys.getenv("SPATSTAT_TEST", unset="")) > 0)
236s > ALWAYS   <- TRUE
236s > cat(paste("--------- Executing",
236s +           if(FULLTEST) "** ALL **" else "**RESTRICTED** subset of",
236s +           "test code -----------\n"))
236s --------- Executing **RESTRICTED** subset of test code -----------
236s > #'  tests/randoms.R
236s > #'   Further tests of random generation code
236s > #'  $Revision: 1.17 $ $Date: 2023/01/06 15:13:10 $
236s > 
236s > 
236s > local({
236s +   if(FULLTEST) {
236s +     #' cases not covered in examples
236s +     A <- runifdisc(6, nsim=2)
236s +     A <- runifpoispp(5, nsim=2)
236s +     A <- runifpoispp(0, nsim=2)
236s +     A <- rSSI(0.05, 6, nsim=2)
236s +     A <- rSSI(0.05, 10, win=square(c(-0.5, 1.5)), x.init=A[[1]], nsim=2)  
236s +     A <- rstrat(nx=4, nsim=2)
236s +     A <- rcell(square(1), nx=5, nsim=2)
236s +   }
236s +   if(ALWAYS) { # involves C code etc
236s +     A <- rthin(cells, P=0.5, nsim=2)
236s +     A <- rthin(cells, runif(42))
236s +     A <- rthin(cells[FALSE], P=0.5, nsim=2)
236s +   }
236s +   f <- function(x,y) { 10*x }
236s +   Z <- as.im(f, square(1))
236s +   if(ALWAYS) {
236s +     A <- rpoint(n=6, f=f, fmax=10, nsim=2)
236s +     A <- rpoint(n=6, f=Z, fmax=10, nsim=2)
236s +     A <- rpoint(n=0, f=f, fmax=10, nsim=2)
236s +     A <- rpoint(n=0, f=Z, fmax=10, nsim=2)
236s + 
236s +     op <- spatstat.options(fastpois=FALSE)
236s +     A <- runifpoispp(5, nsim=2)
236s +     A <- rpoispp(Z)
236s +     spatstat.options(op)
236s +   }
236s +   if(FULLTEST) {
236s +     b3 <- box3(c(0,1))
236s +     b4 <- boxx(c(0,1), c(0,1), c(0,1), c(0,1))
236s +     b5 <- c(0, 2, 0, 2)
236s +     X <- rMaternInhibition(2, kappa=20, r=0.1, win=b3)
236s +     Y <- rMaternInhibition(2, kappa=20, r=0.1, win=b4)
236s +     Y <- rMaternInhibition(2, kappa=20, r=0.1, win=b5, nsim=2)
236s + 
236s +     X <- rSSI(0.05, 6)
236s +     Y <- rSSI(0.05, 6, x.init=X) # no extra points
236s + 
236s +     Z <- rlabel(finpines)
236s +   }
236s + 
236s +   f1 <- function(x,y){(x^2 + y^3)/10}
236s +   f2 <- function(x,y){(x^3 + y^2)/10}
236s +   ZZ <- solist(A=as.im(f1, letterR),
236s +                B=as.im(f2, letterR))
236s +   g <- function(x,y,m){(10+as.integer(m)) * (x^2 + y^3)}
236s +   if(FULLTEST) {
236s +     XX <- rmpoispp(ZZ, nsim=3)
236s +     YY <- rmpoint(10, f=ZZ, nsim=3)
236s +     UU <- rmpoint(10, f=ZZ[[1]], types=letters[1:2])
236s +     VV <- rpoint.multi(10, f=g,
236s +                        marks=factor(sample(letters[1:3], 10, replace=TRUE)),
236s +                        nsim=3)
236s +   }
236s +   if(ALWAYS) { # depends on C code
236s +     L <- edges(letterR)
236s +     E <- runifpoisppOnLines(5, L)
236s +     G <- rpoisppOnLines(ZZ, L)
236s +     G2 <- rpoisppOnLines(list(A=f1, B=f2), L, lmax=max(sapply(ZZ, max)))
236s +   }
236s + 
236s +   if(FULLTEST) {
236s +     #' cluster models + bells + whistles
236s +     X <- rThomas(10, 0.2, 5, saveLambda=TRUE)
236s +     if(is.null(attr(X, "Lambda")))
236s +       stop("rThomas did not save Lambda image")
236s +     Y <- rThomas(0, 0.2, 5, saveLambda=TRUE)
236s +     if(is.null(attr(Y, "Lambda")))
236s +       stop("rThomas did not save Lambda image when kappa=0")
236s +     X <- rMatClust(10, 0.05, 4, saveLambda=TRUE)
236s +     X <- rCauchy(30, 0.01, 5, saveLambda=TRUE)
236s +     X <- rVarGamma(30, 2, 5, nu=0.02, saveLambda=TRUE)
236s +     Z <- as.im(function(x,y){ 5 * exp(2 * x - 1) }, owin())
236s +     Y <- rThomas(10, 0.2, Z, saveLambda=TRUE)
236s +     Y <- rMatClust(10, 0.05, Z, saveLambda=TRUE)
236s +     Y <- rCauchy(30, 0.01, Z, saveLambda=TRUE)
236s +     Y <- rVarGamma(30, 2, Z, nu=0.02, saveLambda=TRUE)
236s +     #' inhomogeneous
236s +     Moo <- as.im(function(x,y) { 10 * x }, unit.square())
236s +     X <- rMatClust(10, 0.2, Moo)
236s +   }
236s + 
236s +   if(FULLTEST) {
236s +     #' perfect simulation code infrastructure
236s +     expandwinPerfect(letterR, 2, 3)
236s + 
236s +     #' trivial cases of random generators for ppx
236s +     B4 <- boxx(0:1, 0:1, 0:1, 0:1)
236s +     Z0 <- runifpointx(0, domain=B4, nsim=2)
236s +     Z1 <- runifpointx(1, domain=B4, nsim=2)
236s +   }
236s + 
236s + })
236s > reset.spatstat.options()
236s > 
236s > 
236s > 
237s autopkgtest [20:19:45]: test run-unit-test: -----------------------]
237s autopkgtest [20:19:45]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
237s run-unit-test        PASS
238s autopkgtest [20:19:46]: test pkg-r-autopkgtest: preparing testbed
423s autopkgtest [20:22:51]: testbed dpkg architecture: arm64
423s autopkgtest [20:22:51]: testbed apt version: 2.7.12
423s autopkgtest [20:22:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup
423s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
424s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
424s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3704 kB]
424s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB]
424s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
424s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB]
424s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
424s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
424s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
424s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4012 kB]
424s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
424s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB]
424s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
426s Fetched 9112 kB in 2s (5610 kB/s)
426s Reading package lists...
429s Reading package lists...
430s Building dependency tree...
430s Reading state information...
430s Calculating upgrade...
431s The following packages will be REMOVED:
431s   libglib2.0-0 libssl3
431s The following NEW packages will be installed:
431s   libglib2.0-0t64 libssl3t64 xdg-user-dirs
431s The following packages have been kept back:
431s   curl
431s The following packages will be upgraded:
431s   gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common
431s   ubuntu-minimal ubuntu-standard
431s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded.
431s Need to get 4613 kB of archives.
431s After this operation, 211 kB of additional disk space will be used.
431s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB]
431s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB]
431s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB]
431s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB]
432s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB]
432s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B]
432s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
432s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB]
432s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB]
432s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB]
432s Fetched 4613 kB in 1s (6767 kB/s)
432s (Reading database ... 
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432s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ...
432s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
432s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested:
432s  udisks2 depends on libglib2.0-0 (>= 2.77.0).
432s  shared-mime-info depends on libglib2.0-0 (>= 2.75.3).
432s  python3-gi depends on libglib2.0-0 (>= 2.77.0).
432s  python3-dbus depends on libglib2.0-0 (>= 2.16.0).
432s  netplan.io depends on libglib2.0-0 (>= 2.70.0).
432s  netplan-generator depends on libglib2.0-0 (>= 2.70.0).
432s  libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0).
432s  libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0).
432s  libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
432s  libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56).
432s  libqmi-proxy depends on libglib2.0-0 (>= 2.30.0).
432s  libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0).
432s  libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
432s  libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
432s  libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3).
432s  libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0).
432s  libmbim-proxy depends on libglib2.0-0 (>= 2.56).
432s  libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56).
432s  libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
432s  libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3).
432s  libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3).
432s  libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
432s  libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0).
432s  libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0).
432s  libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3).
432s  libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2).
432s  fwupd depends on libglib2.0-0 (>= 2.79.0).
432s  bolt depends on libglib2.0-0 (>= 2.56.0).
432s 
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433s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ...
433s Selecting previously unselected package libglib2.0-0t64:arm64.
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433s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ...
433s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled...
433s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm'
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433s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ...
433s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ...
433s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested:
433s  wget depends on libssl3 (>= 3.0.0).
433s  u-boot-tools depends on libssl3 (>= 3.0.0).
433s  tnftp depends on libssl3 (>= 3.0.0).
433s  tcpdump depends on libssl3 (>= 3.0.0).
433s  systemd-resolved depends on libssl3 (>= 3.0.0).
433s  systemd depends on libssl3 (>= 3.0.0).
433s  sudo depends on libssl3 (>= 3.0.0).
433s  sbsigntool depends on libssl3 (>= 3.0.0).
433s  rsync depends on libssl3 (>= 3.0.0).
433s  python3-cryptography depends on libssl3 (>= 3.0.0).
433s  openssh-server depends on libssl3 (>= 3.0.10).
433s  openssh-client depends on libssl3 (>= 3.0.10).
433s  mtd-utils depends on libssl3 (>= 3.0.0).
433s  mokutil depends on libssl3 (>= 3.0.0).
433s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
433s  libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0).
433s  libssh-4:arm64 depends on libssl3 (>= 3.0.0).
433s  libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0).
433s  libsasl2-2:arm64 depends on libssl3 (>= 3.0.0).
433s  libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0).
433s  libnvme1 depends on libssl3 (>= 3.0.0).
433s  libkrb5-3:arm64 depends on libssl3 (>= 3.0.0).
433s  libkmod2:arm64 depends on libssl3 (>= 3.0.0).
433s  libfido2-1:arm64 depends on libssl3 (>= 3.0.0).
433s  libcurl4:arm64 depends on libssl3 (>= 3.0.0).
433s  libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0).
433s  kmod depends on libssl3 (>= 3.0.0).
433s  dhcpcd-base depends on libssl3 (>= 3.0.0).
433s  bind9-libs:arm64 depends on libssl3 (>= 3.0.0).
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433s Removing libssl3:arm64 (3.0.10-1ubuntu4) ...
433s Selecting previously unselected package libssl3t64:arm64.
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433s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ...
433s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ...
433s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ...
433s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
433s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ...
433s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ...
433s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ...
433s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
433s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ...
433s Unpacking ubuntu-minimal (1.536) over (1.535) ...
433s Selecting previously unselected package xdg-user-dirs.
433s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ...
433s Unpacking xdg-user-dirs (0.18-1) ...
433s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ...
433s Unpacking ubuntu-standard (1.536) over (1.535) ...
433s Setting up ubuntu-minimal (1.536) ...
433s Setting up xdg-user-dirs (0.18-1) ...
433s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ...
433s Setting up libtirpc-common (1.3.4+ds-1.1) ...
433s Setting up ubuntu-standard (1.536) ...
433s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
433s No schema files found: doing nothing.
433s Setting up libglib2.0-data (2.79.3-3ubuntu5) ...
433s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ...
433s Setting up openssl (3.0.13-0ubuntu1) ...
433s Setting up readline-common (8.2-3.1) ...
433s Processing triggers for man-db (2.12.0-3) ...
434s Processing triggers for install-info (7.1-3) ...
434s Processing triggers for libc-bin (2.39-0ubuntu2) ...
434s Reading package lists...
435s Building dependency tree...
435s Reading state information...
435s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
436s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
436s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
436s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
436s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
437s Reading package lists...
437s Reading package lists...
437s Building dependency tree...
437s Reading state information...
437s Calculating upgrade...
438s The following packages have been kept back:
438s   curl
438s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
438s Reading package lists...
438s Building dependency tree...
438s Reading state information...
439s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
443s Reading package lists...
443s Building dependency tree...
443s Reading state information...
443s Starting pkgProblemResolver with broken count: 0
443s Starting 2 pkgProblemResolver with broken count: 0
443s Done
444s The following additional packages will be installed:
444s   build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu
444s   curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core
444s   fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu
444s   gcc gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran
444s   gfortran-13 gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu
444s   icu-devtools libasan8 libatomic1 libblas-dev libblas3 libbz2-dev
444s   libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64
444s   libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev
444s   libgfortran5 libgomp1 libgraphite2-3 libgsl27 libgslcblas0 libharfbuzz0b
444s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
444s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev
444s   liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev
444s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
444s   libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
444s   libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpsl5t64
444s   libreadline-dev libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev
444s   libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6
444s   libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1
444s   libxss1 libxt6t64 linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf
444s   pkgconf-bin r-base-core r-base-dev r-cran-abind r-cran-deldir r-cran-goftest
444s   r-cran-gsl r-cran-lattice r-cran-matrix r-cran-mgcv r-cran-nlme
444s   r-cran-polyclip r-cran-rpart r-cran-spatial r-cran-spatstat
444s   r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom
444s   r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random
444s   r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-survival r-cran-tensor
444s   rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev
444s Suggested packages:
444s   cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib
444s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
444s   gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev
444s   liblapack-doc glibc-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info
444s   | gsl-ref-html icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc
444s   tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
444s   texlive-base texlive-latex-base texlive-plain-generic
444s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
444s   texlive-latex-recommended texlive-latex-extra texinfo
444s Recommended packages:
444s   bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended
444s   r-doc-html r-cran-sm r-cran-locfit r-cran-nleqslv r-cran-glmnet
444s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
444s   x11-xserver-utils
444s The following packages will be REMOVED:
444s   libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3
444s The following NEW packages will be installed:
444s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu
444s   cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config
444s   fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu
444s   g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu
444s   gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu
444s   gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev
444s   libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev
444s   libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev
444s   libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libgsl27
444s   libgslcblas0 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1
444s   libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev
444s   liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3
444s   libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0
444s   libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0
444s   libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev
444s   libpng16-16t64 libpsl5t64 libreadline-dev libreadline8t64 libsharpyuv0
444s   libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6
444s   libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7
444s   libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64
444s   linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core
444s   r-base-dev r-cran-abind r-cran-deldir r-cran-goftest r-cran-gsl
444s   r-cran-lattice r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-polyclip
444s   r-cran-rpart r-cran-spatial r-cran-spatstat r-cran-spatstat.data
444s   r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet
444s   r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse
444s   r-cran-spatstat.utils r-cran-survival r-cran-tensor rpcsvc-proto unzip
444s   x11-common xdg-utils zip zlib1g-dev
444s The following packages will be upgraded:
444s   curl
444s 1 upgraded, 135 newly installed, 5 to remove and 0 not upgraded.
444s Need to get 171 MB/171 MB of archives.
444s After this operation, 473 MB of additional disk space will be used.
444s Get:1 /tmp/autopkgtest.GXqL1B/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [748 B]
444s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB]
444s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB]
444s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB]
444s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB]
444s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
444s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB]
444s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB]
444s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB]
445s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB]
445s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB]
445s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB]
445s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB]
445s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB]
445s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB]
445s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB]
445s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB]
445s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B]
445s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B]
445s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB]
445s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB]
445s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
445s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB]
445s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
445s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB]
445s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB]
445s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB]
445s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB]
445s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB]
445s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB]
445s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB]
446s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB]
446s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B]
446s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B]
446s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB]
446s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB]
446s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB]
446s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B]
446s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B]
446s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
446s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
446s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
446s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
446s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
446s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
446s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB]
446s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
446s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB]
446s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB]
446s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB]
446s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B]
446s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B]
446s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB]
446s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB]
446s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB]
446s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB]
446s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
446s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
446s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
446s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
446s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
446s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB]
446s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
446s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
446s Get:65 http://ftpmaster.internal/ubuntu noble/universe arm64 libgslcblas0 arm64 2.7.1+dfsg-6ubuntu1 [72.5 kB]
446s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 libgsl27 arm64 2.7.1+dfsg-6ubuntu1 [912 kB]
446s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
446s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
446s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB]
446s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB]
447s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
447s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB]
447s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
447s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
447s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
447s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB]
447s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB]
447s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
447s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB]
447s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB]
447s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB]
447s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB]
447s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB]
447s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB]
447s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB]
447s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B]
447s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB]
447s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB]
447s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B]
447s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB]
447s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB]
447s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB]
447s Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB]
447s Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB]
447s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
447s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB]
447s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB]
447s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
447s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
447s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
447s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
447s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B]
447s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB]
448s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB]
448s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB]
448s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB]
448s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B]
448s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB]
448s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB]
448s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
448s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB]
449s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB]
449s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B]
449s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
449s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB]
449s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-deldir arm64 2.0-4-1 [270 kB]
449s Get:117 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB]
449s Get:118 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gsl arm64 2.1-8-1 [489 kB]
449s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB]
449s Get:120 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB]
449s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB]
449s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB]
449s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-polyclip arm64 1.10-6-1 [110 kB]
449s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB]
449s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rpart arm64 4.1.23-1 [660 kB]
449s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatial arm64 7.3-17-1 [130 kB]
449s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.utils arm64 3.0-4-1 [360 kB]
449s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.data all 3.0-4-1 [4090 kB]
449s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.geom arm64 3.2-8-1 [3805 kB]
450s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.random arm64 3.2-2-1 [1127 kB]
450s Get:131 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB]
450s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.sparse arm64 3.0-3-1 [214 kB]
450s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.explore arm64 3.2-5-1 [3264 kB]
450s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.model arm64 3.2-8-1 [3289 kB]
450s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.linnet arm64 3.1-3-1 [1404 kB]
450s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat arm64 3.0-7-1 [3817 kB]
451s Preconfiguring packages ...
451s Fetched 171 MB in 6s (28.3 MB/s)
451s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested:
451s  wget depends on libpsl5 (>= 0.16.0).
451s  libcurl4:arm64 depends on libpsl5 (>= 0.16.0).
451s  libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0).
451s 
451s (Reading database ... 
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(Reading database ... 74774 files and directories currently installed.)
451s Removing libpsl5:arm64 (0.21.2-1build1) ...
451s Selecting previously unselected package libpsl5t64:arm64.
451s (Reading database ... 
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451s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ...
451s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ...
451s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ...
451s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ...
451s (Reading database ... 
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451s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ...
451s Selecting previously unselected package libcurl4t64:arm64.
451s (Reading database ... 
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451s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ...
451s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ...
451s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested:
451s  libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2).
451s  libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1).
451s 
451s (Reading database ... 
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451s Removing libpng16-16:arm64 (1.6.43-1) ...
452s Selecting previously unselected package libpng16-16t64:arm64.
452s (Reading database ... 
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452s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ...
452s Unpacking libpng16-16t64:arm64 (1.6.43-3) ...
452s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
452s  parted depends on libreadline8 (>= 6.0).
452s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
452s  gpgsm depends on libreadline8 (>= 6.0).
452s  gpgconf depends on libreadline8 (>= 6.0).
452s  gpg depends on libreadline8 (>= 6.0).
452s  gawk depends on libreadline8 (>= 6.0).
452s  fdisk depends on libreadline8 (>= 6.0).
452s 
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452s Removing libreadline8:arm64 (8.2-3) ...
452s Selecting previously unselected package libreadline8t64:arm64.
452s (Reading database ... 
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452s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ...
452s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
452s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
452s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
452s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
452s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
452s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested:
452s  lsof depends on libtirpc3 (>= 1.0.2).
452s  libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2).
452s  libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2).
452s  libnsl2:arm64 depends on libtirpc3 (>= 1.0.2).
452s  iproute2 depends on libtirpc3 (>= 1.0.2).
452s 
452s (Reading database ... 
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452s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ...
452s Selecting previously unselected package libtirpc3t64:arm64.
452s (Reading database ... 
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452s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ...
452s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
452s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
452s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ...
452s Selecting previously unselected package libc-dev-bin.
452s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ...
452s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
452s Selecting previously unselected package linux-libc-dev:arm64.
452s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ...
452s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ...
452s Selecting previously unselected package libcrypt-dev:arm64.
452s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ...
452s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ...
452s Selecting previously unselected package libtirpc-dev:arm64.
452s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ...
452s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ...
452s Selecting previously unselected package libnsl-dev:arm64.
452s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ...
452s Unpacking libnsl-dev:arm64 (1.3.0-3) ...
452s Selecting previously unselected package rpcsvc-proto.
452s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ...
452s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
452s Selecting previously unselected package libc6-dev:arm64.
452s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ...
452s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ...
453s Selecting previously unselected package libisl23:arm64.
453s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ...
453s Unpacking libisl23:arm64 (0.26-3) ...
453s Selecting previously unselected package libmpc3:arm64.
453s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ...
453s Unpacking libmpc3:arm64 (1.3.1-1) ...
453s Selecting previously unselected package cpp-13-aarch64-linux-gnu.
453s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
453s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
453s Selecting previously unselected package cpp-13.
453s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ...
453s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
453s Selecting previously unselected package cpp-aarch64-linux-gnu.
453s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
453s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
453s Selecting previously unselected package cpp.
453s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ...
453s Unpacking cpp (4:13.2.0-7ubuntu1) ...
453s Selecting previously unselected package libcc1-0:arm64.
453s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libgomp1:arm64.
453s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libitm1:arm64.
453s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libatomic1:arm64.
453s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libasan8:arm64.
453s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package liblsan0:arm64.
453s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libtsan2:arm64.
453s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libubsan1:arm64.
453s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libhwasan0:arm64.
453s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ...
453s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ...
453s Selecting previously unselected package libgcc-13-dev:arm64.
453s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ...
453s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
454s Selecting previously unselected package gcc-13-aarch64-linux-gnu.
454s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
454s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
454s Selecting previously unselected package gcc-13.
454s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ...
454s Unpacking gcc-13 (13.2.0-17ubuntu2) ...
454s Selecting previously unselected package gcc-aarch64-linux-gnu.
454s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
454s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
454s Selecting previously unselected package gcc.
454s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ...
454s Unpacking gcc (4:13.2.0-7ubuntu1) ...
454s Selecting previously unselected package libstdc++-13-dev:arm64.
454s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ...
454s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
455s Selecting previously unselected package g++-13-aarch64-linux-gnu.
455s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
455s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
455s Selecting previously unselected package g++-13.
455s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ...
455s Unpacking g++-13 (13.2.0-17ubuntu2) ...
455s Selecting previously unselected package g++-aarch64-linux-gnu.
455s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
455s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
455s Selecting previously unselected package g++.
455s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ...
455s Unpacking g++ (4:13.2.0-7ubuntu1) ...
455s Selecting previously unselected package build-essential.
455s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ...
455s Unpacking build-essential (12.10ubuntu1) ...
455s Selecting previously unselected package dctrl-tools.
455s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ...
455s Unpacking dctrl-tools (2.24-3build2) ...
455s Selecting previously unselected package fonts-dejavu-mono.
455s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ...
455s Unpacking fonts-dejavu-mono (2.37-8) ...
455s Selecting previously unselected package fonts-dejavu-core.
455s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ...
455s Unpacking fonts-dejavu-core (2.37-8) ...
455s Selecting previously unselected package fontconfig-config.
455s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
456s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
456s Selecting previously unselected package libfontconfig1:arm64.
456s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
456s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
456s Selecting previously unselected package fontconfig.
456s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ...
456s Unpacking fontconfig (2.15.0-1ubuntu1) ...
456s Selecting previously unselected package libgfortran5:arm64.
456s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
456s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
456s Selecting previously unselected package libgfortran-13-dev:arm64.
456s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ...
456s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ...
456s Selecting previously unselected package gfortran-13-aarch64-linux-gnu.
456s Preparing to unpack .../042-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
456s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
456s Selecting previously unselected package gfortran-13.
456s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_arm64.deb ...
456s Unpacking gfortran-13 (13.2.0-17ubuntu2) ...
456s Selecting previously unselected package gfortran-aarch64-linux-gnu.
456s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
456s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
456s Selecting previously unselected package gfortran.
456s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ...
456s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
456s Selecting previously unselected package icu-devtools.
456s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu1_arm64.deb ...
456s Unpacking icu-devtools (74.2-1ubuntu1) ...
456s Selecting previously unselected package libblas3:arm64.
456s Preparing to unpack .../047-libblas3_3.12.0-3_arm64.deb ...
456s Unpacking libblas3:arm64 (3.12.0-3) ...
456s Selecting previously unselected package libblas-dev:arm64.
456s Preparing to unpack .../048-libblas-dev_3.12.0-3_arm64.deb ...
456s Unpacking libblas-dev:arm64 (3.12.0-3) ...
456s Selecting previously unselected package libbz2-dev:arm64.
456s Preparing to unpack .../049-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ...
456s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ...
456s Selecting previously unselected package libpixman-1-0:arm64.
456s Preparing to unpack .../050-libpixman-1-0_0.42.2-1_arm64.deb ...
456s Unpacking libpixman-1-0:arm64 (0.42.2-1) ...
456s Selecting previously unselected package libxcb-render0:arm64.
456s Preparing to unpack .../051-libxcb-render0_1.15-1_arm64.deb ...
456s Unpacking libxcb-render0:arm64 (1.15-1) ...
456s Selecting previously unselected package libxcb-shm0:arm64.
456s Preparing to unpack .../052-libxcb-shm0_1.15-1_arm64.deb ...
456s Unpacking libxcb-shm0:arm64 (1.15-1) ...
456s Selecting previously unselected package libxrender1:arm64.
456s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
456s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
457s Selecting previously unselected package libcairo2:arm64.
457s Preparing to unpack .../054-libcairo2_1.18.0-1_arm64.deb ...
457s Unpacking libcairo2:arm64 (1.18.0-1) ...
457s Selecting previously unselected package libdatrie1:arm64.
457s Preparing to unpack .../055-libdatrie1_0.2.13-3_arm64.deb ...
457s Unpacking libdatrie1:arm64 (0.2.13-3) ...
457s Selecting previously unselected package libdeflate0:arm64.
457s Preparing to unpack .../056-libdeflate0_1.19-1_arm64.deb ...
457s Unpacking libdeflate0:arm64 (1.19-1) ...
457s Selecting previously unselected package libgraphite2-3:arm64.
457s Preparing to unpack .../057-libgraphite2-3_1.3.14-2_arm64.deb ...
457s Unpacking libgraphite2-3:arm64 (1.3.14-2) ...
457s Selecting previously unselected package libgslcblas0:arm64.
457s Preparing to unpack .../058-libgslcblas0_2.7.1+dfsg-6ubuntu1_arm64.deb ...
457s Unpacking libgslcblas0:arm64 (2.7.1+dfsg-6ubuntu1) ...
457s Selecting previously unselected package libgsl27:arm64.
457s Preparing to unpack .../059-libgsl27_2.7.1+dfsg-6ubuntu1_arm64.deb ...
457s Unpacking libgsl27:arm64 (2.7.1+dfsg-6ubuntu1) ...
457s Selecting previously unselected package libharfbuzz0b:arm64.
457s Preparing to unpack .../060-libharfbuzz0b_8.3.0-2_arm64.deb ...
457s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ...
457s Selecting previously unselected package x11-common.
457s Preparing to unpack .../061-x11-common_1%3a7.7+23ubuntu2_all.deb ...
457s Unpacking x11-common (1:7.7+23ubuntu2) ...
457s Selecting previously unselected package libice6:arm64.
457s Preparing to unpack .../062-libice6_2%3a1.0.10-1build2_arm64.deb ...
457s Unpacking libice6:arm64 (2:1.0.10-1build2) ...
457s Selecting previously unselected package libicu-dev:arm64.
457s Preparing to unpack .../063-libicu-dev_74.2-1ubuntu1_arm64.deb ...
457s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ...
458s Selecting previously unselected package libjpeg-turbo8:arm64.
458s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
458s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
458s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
458s Preparing to unpack .../065-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ...
458s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
458s Selecting previously unselected package libjpeg8:arm64.
458s Preparing to unpack .../066-libjpeg8_8c-2ubuntu11_arm64.deb ...
458s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
458s Selecting previously unselected package libjpeg8-dev:arm64.
458s Preparing to unpack .../067-libjpeg8-dev_8c-2ubuntu11_arm64.deb ...
458s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ...
458s Selecting previously unselected package libjpeg-dev:arm64.
458s Preparing to unpack .../068-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
458s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
458s Selecting previously unselected package liblapack3:arm64.
458s Preparing to unpack .../069-liblapack3_3.12.0-3_arm64.deb ...
458s Unpacking liblapack3:arm64 (3.12.0-3) ...
458s Selecting previously unselected package liblapack-dev:arm64.
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458s Selecting previously unselected package liblerc4:arm64.
458s Preparing to unpack .../071-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
458s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
458s Selecting previously unselected package libncurses-dev:arm64.
458s Preparing to unpack .../072-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ...
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458s Selecting previously unselected package libthai-data.
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458s Selecting previously unselected package libthai0:arm64.
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458s Selecting previously unselected package libpango-1.0-0:arm64.
458s Preparing to unpack .../075-libpango-1.0-0_1.51.0+ds-4_arm64.deb ...
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458s Selecting previously unselected package libpangoft2-1.0-0:arm64.
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458s Selecting previously unselected package libpangocairo-1.0-0:arm64.
458s Preparing to unpack .../077-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ...
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458s Selecting previously unselected package libpaper1:arm64.
458s Preparing to unpack .../078-libpaper1_1.1.29_arm64.deb ...
458s Unpacking libpaper1:arm64 (1.1.29) ...
458s Selecting previously unselected package libpaper-utils.
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458s Selecting previously unselected package libpcre2-16-0:arm64.
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458s Selecting previously unselected package libpcre2-32-0:arm64.
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458s Selecting previously unselected package libpcre2-posix3:arm64.
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458s Selecting previously unselected package libpcre2-dev:arm64.
458s Preparing to unpack .../083-libpcre2-dev_10.42-4ubuntu1_arm64.deb ...
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458s Selecting previously unselected package libpkgconf3:arm64.
458s Preparing to unpack .../084-libpkgconf3_1.8.1-2_arm64.deb ...
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459s Selecting previously unselected package zlib1g-dev:arm64.
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459s Selecting previously unselected package libpng-dev:arm64.
459s Preparing to unpack .../086-libpng-dev_1.6.43-3_arm64.deb ...
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459s Selecting previously unselected package libreadline-dev:arm64.
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459s Selecting previously unselected package libsharpyuv0:arm64.
459s Preparing to unpack .../088-libsharpyuv0_1.3.2-0.4_arm64.deb ...
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459s Selecting previously unselected package libsm6:arm64.
459s Preparing to unpack .../089-libsm6_2%3a1.2.3-1build2_arm64.deb ...
459s Unpacking libsm6:arm64 (2:1.2.3-1build2) ...
459s Selecting previously unselected package libtcl8.6:arm64.
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459s Selecting previously unselected package libjbig0:arm64.
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459s Selecting previously unselected package libwebp7:arm64.
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459s Selecting previously unselected package libtiff6:arm64.
459s Preparing to unpack .../093-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
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459s Selecting previously unselected package libxft2:arm64.
459s Preparing to unpack .../094-libxft2_2.3.6-1_arm64.deb ...
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459s Selecting previously unselected package libxss1:arm64.
459s Preparing to unpack .../095-libxss1_1%3a1.2.3-1build2_arm64.deb ...
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459s Selecting previously unselected package libtk8.6:arm64.
459s Preparing to unpack .../096-libtk8.6_8.6.13-2_arm64.deb ...
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459s Selecting previously unselected package libxt6t64:arm64.
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459s Preparing to unpack .../100-pkg-config_1.8.1-2_arm64.deb ...
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459s Preparing to unpack .../101-zip_3.0-13_arm64.deb ...
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459s Preparing to unpack .../102-unzip_6.0-28ubuntu3_arm64.deb ...
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459s Selecting previously unselected package xdg-utils.
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459s Selecting previously unselected package liblzma-dev:arm64.
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460s Unpacking r-base-dev (4.3.3-2build1) ...
460s Selecting previously unselected package pkg-r-autopkgtest.
460s Preparing to unpack .../107-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
460s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
460s Selecting previously unselected package r-cran-abind.
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460s Selecting previously unselected package r-cran-gsl.
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460s Selecting previously unselected package r-cran-lattice.
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460s Selecting previously unselected package r-cran-matrix.
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460s Selecting previously unselected package r-cran-mgcv.
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460s Selecting previously unselected package r-cran-polyclip.
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460s Selecting previously unselected package r-cran-survival.
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460s Selecting previously unselected package r-cran-rpart.
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460s Selecting previously unselected package r-cran-spatstat.utils.
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460s Selecting previously unselected package r-cran-spatstat.geom.
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461s Setting up libgraphite2-3:arm64 (1.3.14-2) ...
461s Setting up libpixman-1-0:arm64 (0.42.2-1) ...
461s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
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461s 
461s Creating config file /etc/papersize with new version
461s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
461s Setting up libxrender1:arm64 (1:0.9.10-1.1) ...
461s Setting up libdatrie1:arm64 (0.2.13-3) ...
461s Setting up libgslcblas0:arm64 (2.7.1+dfsg-6ubuntu1) ...
461s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ...
461s Setting up libxcb-render0:arm64 (1.15-1) ...
461s Setting up unzip (6.0-28ubuntu3) ...
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461s Setting up libpsl5t64:arm64 (0.21.2-1.1) ...
461s Setting up libdeflate0:arm64 (1.19-1) ...
461s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ...
461s Setting up libgsl27:arm64 (2.7.1+dfsg-6ubuntu1) ...
461s Setting up libxcb-shm0:arm64 (1.15-1) ...
461s Setting up libpaper-utils (1.1.29) ...
461s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ...
461s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
462s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ...
462s Setting up zip (3.0-13) ...
462s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
462s Setting up libblas3:arm64 (3.12.0-3) ...
462s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
462s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ...
462s Setting up libpkgconf3:arm64 (1.8.1-2) ...
462s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
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462s Setting up libmpc3:arm64 (1.3.1-1) ...
462s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ...
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462s Setting up pkgconf-bin (1.8.1-2) ...
462s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
462s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libwebp7:arm64 (1.3.2-0.4) ...
462s Setting up libreadline8t64:arm64 (8.2-3.1) ...
462s Setting up liblzma-dev:arm64 (5.4.5-0.3) ...
462s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ...
462s Setting up libnsl-dev:arm64 (1.3.0-3) ...
462s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ...
462s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libharfbuzz0b:arm64 (8.3.0-2) ...
462s Setting up libthai-data (0.1.29-2) ...
462s Setting up libxss1:arm64 (1:1.2.3-1build2) ...
462s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libisl23:arm64 (0.26-3) ...
462s Setting up libc-dev-bin (2.39-0ubuntu2) ...
462s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
462s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
462s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ...
462s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ...
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462s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
462s Setting up dctrl-tools (2.24-3build2) ...
462s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ...
462s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
462s Setting up libice6:arm64 (2:1.0.10-1build2) ...
462s Setting up liblapack3:arm64 (3.12.0-3) ...
462s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
462s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
462s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ...
462s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
462s Setting up pkgconf:arm64 (1.8.1-2) ...
462s Setting up libthai0:arm64 (0.1.29-2) ...
462s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
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462s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
462s Setting up pkg-config:arm64 (1.8.1-2) ...
462s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
462s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
462s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ...
462s Setting up curl (8.5.0-2ubuntu7) ...
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462s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ...
462s Setting up libsm6:arm64 (2:1.2.3-1build2) ...
462s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ...
462s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
462s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ...
462s Setting up fontconfig (2.15.0-1ubuntu1) ...
464s Regenerating fonts cache... done.
464s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
464s Setting up libxft2:arm64 (2.3.6-1) ...
464s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ...
464s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ...
464s Setting up cpp-13 (13.2.0-17ubuntu2) ...
464s Setting up libtk8.6:arm64 (8.6.13-2) ...
464s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ...
464s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
464s Setting up libreadline-dev:arm64 (8.2-3.1) ...
464s Setting up libcairo2:arm64 (1.18.0-1) ...
464s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ...
464s Setting up gcc-13 (13.2.0-17ubuntu2) ...
464s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ...
464s Setting up cpp (4:13.2.0-7ubuntu1) ...
464s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
464s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
464s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
464s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
464s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
464s Setting up g++-13 (13.2.0-17ubuntu2) ...
464s Setting up libpng-dev:arm64 (1.6.43-3) ...
464s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
464s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
464s Setting up gcc (4:13.2.0-7ubuntu1) ...
464s Setting up gfortran-13 (13.2.0-17ubuntu2) ...
464s Setting up r-base-core (4.3.3-2build1) ...
464s 
464s Creating config file /etc/R/Renviron with new version
464s Setting up r-cran-lattice (0.22-5-1) ...
464s Setting up r-cran-nlme (3.1.164-1) ...
464s Setting up r-cran-spatstat.utils (3.0-4-1) ...
464s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
464s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
464s Setting up r-cran-tensor (1.5-4) ...
464s Setting up r-cran-gsl (2.1-8-1) ...
464s Setting up r-cran-spatial (7.3-17-1) ...
464s Setting up r-cran-abind (1.4-5-2) ...
464s Setting up r-cran-polyclip (1.10-6-1) ...
464s Setting up gfortran (4:13.2.0-7ubuntu1) ...
464s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
464s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
464s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
464s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
464s Setting up r-cran-deldir (2.0-4-1) ...
464s Setting up r-cran-goftest (1.2-3-1) ...
464s Setting up r-cran-matrix (1.6-5-1) ...
464s Setting up r-cran-spatstat.sparse (3.0-3-1) ...
464s Setting up r-cran-mgcv (1.9-1-1) ...
464s Setting up g++ (4:13.2.0-7ubuntu1) ...
464s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
464s Setting up build-essential (12.10ubuntu1) ...
464s Setting up r-base-dev (4.3.3-2build1) ...
464s Setting up r-cran-survival (3.5-8-1) ...
464s Setting up r-cran-spatstat.data (3.0-4-1) ...
464s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
464s Setting up r-cran-spatstat.geom (3.2-8-1) ...
464s Setting up r-cran-rpart (4.1.23-1) ...
464s Setting up r-cran-spatstat.random (3.2-2-1) ...
464s Setting up r-cran-spatstat.explore (3.2-5-1) ...
464s Setting up r-cran-spatstat.model (3.2-8-1) ...
464s Setting up r-cran-spatstat.linnet (3.1-3-1) ...
464s Setting up r-cran-spatstat (3.0-7-1) ...
464s Setting up autopkgtest-satdep (0) ...
464s Processing triggers for man-db (2.12.0-3) ...
465s Processing triggers for install-info (7.1-3) ...
465s Processing triggers for libc-bin (2.39-0ubuntu2) ...
471s (Reading database ... 81574 files and directories currently installed.)
471s Removing autopkgtest-satdep (0) ...
473s autopkgtest [20:23:41]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
473s autopkgtest [20:23:41]: test pkg-r-autopkgtest: [-----------------------
473s Test: Try to load the R library spatstat.random
473s 
473s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
473s Copyright (C) 2024 The R Foundation for Statistical Computing
473s Platform: aarch64-unknown-linux-gnu (64-bit)
473s 
473s R is free software and comes with ABSOLUTELY NO WARRANTY.
473s You are welcome to redistribute it under certain conditions.
473s Type 'license()' or 'licence()' for distribution details.
473s 
473s R is a collaborative project with many contributors.
473s Type 'contributors()' for more information and
473s 'citation()' on how to cite R or R packages in publications.
473s 
473s Type 'demo()' for some demos, 'help()' for on-line help, or
473s 'help.start()' for an HTML browser interface to help.
473s Type 'q()' to quit R.
473s 
473s > library('spatstat.random')
473s Loading required package: spatstat.data
474s Loading required package: spatstat.geom
474s spatstat.geom 3.2-8
474s spatstat.random 3.2-2
474s > 
474s > 
474s Other tests are currently unsupported!
474s They will be progressively added.
475s autopkgtest [20:23:43]: test pkg-r-autopkgtest: -----------------------]
475s autopkgtest [20:23:43]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
475s pkg-r-autopkgtest    PASS
475s autopkgtest [20:23:43]: @@@@@@@@@@@@@@@@@@@@ summary
475s run-unit-test        PASS
475s pkg-r-autopkgtest    PASS
500s Creating nova instance adt-noble-arm64-r-cran-spatstat.random-20240316-201548-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...
500s Creating nova instance adt-noble-arm64-r-cran-spatstat.random-20240316-201548-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...