0s autopkgtest [19:36:56]: starting date and time: 2024-03-16 19:36:56+0000 0s autopkgtest [19:36:56]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:36:56]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vsdstgl1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-proxy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-10.secgroup --name adt-noble-arm64-r-cran-proxy-20240316-193656-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 63s autopkgtest [19:37:59]: testbed dpkg architecture: arm64 63s autopkgtest [19:37:59]: testbed apt version: 2.7.12 63s autopkgtest [19:37:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 64s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 64s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB] 66s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 66s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 66s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 66s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 66s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 66s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 66s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 66s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4013 kB] 67s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 67s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 67s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 69s Fetched 9065 kB in 4s (2585 kB/s) 69s Reading package lists... 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 73s Calculating upgrade... 73s The following packages will be REMOVED: 73s libglib2.0-0 libssl3 73s The following NEW packages will be installed: 73s libglib2.0-0t64 libssl3t64 xdg-user-dirs 73s The following packages have been kept back: 73s curl 73s The following packages will be upgraded: 73s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 73s ubuntu-minimal ubuntu-standard 73s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 73s Need to get 4613 kB of archives. 73s After this operation, 211 kB of additional disk space will be used. 73s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 73s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 74s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 74s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 74s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 74s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 74s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 74s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 74s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 74s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 74s Fetched 4613 kB in 1s (6435 kB/s) 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 75s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 75s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 75s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 75s udisks2 depends on libglib2.0-0 (>= 2.77.0). 75s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 75s python3-gi depends on libglib2.0-0 (>= 2.77.0). 75s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 75s netplan.io depends on libglib2.0-0 (>= 2.70.0). 75s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 75s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 75s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 75s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 75s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 75s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 75s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 75s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 75s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 75s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 75s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 75s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 75s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 75s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 75s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 75s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 75s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 75s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 75s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 75s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 75s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 75s fwupd depends on libglib2.0-0 (>= 2.79.0). 75s bolt depends on libglib2.0-0 (>= 2.56.0). 75s 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 75s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 75s Selecting previously unselected package libglib2.0-0t64:arm64. 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 75s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 75s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 75s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 75s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 75s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 75s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 76s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 76s wget depends on libssl3 (>= 3.0.0). 76s u-boot-tools depends on libssl3 (>= 3.0.0). 76s tnftp depends on libssl3 (>= 3.0.0). 76s tcpdump depends on libssl3 (>= 3.0.0). 76s systemd-resolved depends on libssl3 (>= 3.0.0). 76s systemd depends on libssl3 (>= 3.0.0). 76s sudo depends on libssl3 (>= 3.0.0). 76s sbsigntool depends on libssl3 (>= 3.0.0). 76s rsync depends on libssl3 (>= 3.0.0). 76s python3-cryptography depends on libssl3 (>= 3.0.0). 76s openssh-server depends on libssl3 (>= 3.0.10). 76s openssh-client depends on libssl3 (>= 3.0.10). 76s mtd-utils depends on libssl3 (>= 3.0.0). 76s mokutil depends on libssl3 (>= 3.0.0). 76s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 76s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 76s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 76s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 76s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 76s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 76s libnvme1 depends on libssl3 (>= 3.0.0). 76s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 76s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 76s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 76s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 76s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 76s kmod depends on libssl3 (>= 3.0.0). 76s dhcpcd-base depends on libssl3 (>= 3.0.0). 76s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 76s 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 76s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 76s Selecting previously unselected package libssl3t64:arm64. 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 76s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 76s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 76s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 76s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 76s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 76s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 76s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 76s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 76s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 76s Unpacking ubuntu-minimal (1.536) over (1.535) ... 76s Selecting previously unselected package xdg-user-dirs. 76s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 76s Unpacking xdg-user-dirs (0.18-1) ... 76s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 76s Unpacking ubuntu-standard (1.536) over (1.535) ... 76s Setting up ubuntu-minimal (1.536) ... 76s Setting up xdg-user-dirs (0.18-1) ... 76s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 76s Setting up libtirpc-common (1.3.4+ds-1.1) ... 76s Setting up ubuntu-standard (1.536) ... 76s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 76s No schema files found: doing nothing. 76s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 76s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 76s Setting up openssl (3.0.13-0ubuntu1) ... 76s Setting up readline-common (8.2-3.1) ... 76s Processing triggers for man-db (2.12.0-3) ... 77s Processing triggers for install-info (7.1-3) ... 77s Processing triggers for libc-bin (2.39-0ubuntu2) ... 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 78s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 79s sh: Attempting to set up Debian/Ubuntu apt sources automatically 79s sh: Distribution appears to be Ubuntu 79s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s eatmydata is already the newest version (131-1). 80s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 81s dbus is already the newest version (1.14.10-4ubuntu1). 81s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s rng-tools-debian is already the newest version (2.4). 81s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Reading package lists... 82s Building dependency tree... 82s Reading state information... 82s The following packages will be REMOVED: 82s cloud-init* python3-configobj* python3-debconf* 82s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 82s After this operation, 3252 kB disk space will be freed. 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 83s Removing cloud-init (24.1.1-0ubuntu1) ... 83s Removing python3-configobj (5.0.8-3) ... 83s Removing python3-debconf (1.5.86) ... 83s Processing triggers for man-db (2.12.0-3) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74385 files and directories currently installed.) 83s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 84s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 84s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 84s invoke-rc.d: policy-rc.d denied execution of try-restart. 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 85s linux-generic is already the newest version (6.8.0-11.11+1). 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 85s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 85s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 87s Reading package lists... 87s Reading package lists... 88s Building dependency tree... 88s Reading state information... 88s Calculating upgrade... 88s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 88s Reading package lists... 89s Building dependency tree... 89s Reading state information... 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 91s autopkgtest [19:38:27]: rebooting testbed after setup commands that affected boot 117s autopkgtest [19:38:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 120s autopkgtest [19:38:56]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-proxy 122s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-proxy 0.4-27-1 (dsc) [2077 B] 122s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-proxy 0.4-27-1 (tar) [74.6 kB] 122s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-proxy 0.4-27-1 (diff) [2200 B] 123s gpgv: Signature made Fri Jun 24 06:44:56 2022 UTC 123s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 123s gpgv: issuer "tille@debian.org" 123s gpgv: Can't check signature: No public key 123s dpkg-source: warning: cannot verify inline signature for ./r-cran-proxy_0.4-27-1.dsc: no acceptable signature found 123s autopkgtest [19:38:59]: testing package r-cran-proxy version 0.4-27-1 123s autopkgtest [19:38:59]: build not needed 124s autopkgtest [19:39:00]: test run-unit-test: preparing testbed 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 125s Starting pkgProblemResolver with broken count: 0 126s Starting 2 pkgProblemResolver with broken count: 0 126s Done 126s The following additional packages will be installed: 126s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 126s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 126s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 126s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 126s libpaper-utils libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 126s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 126s libxft2 libxrender1 libxss1 libxt6 r-base-core r-cran-cba r-cran-proxy unzip 126s x11-common xdg-utils zip 126s Suggested packages: 126s tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 126s r-cran-gclus r-cran-colorspace 126s Recommended packages: 126s r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl 126s libx11-protocol-perl x11-utils x11-xserver-utils 126s The following NEW packages will be installed: 126s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 126s fonts-dejavu-mono libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1 126s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 126s libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 126s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 126s libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 126s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 126s r-base-core r-cran-cba r-cran-proxy unzip x11-common xdg-utils zip 126s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. 126s Need to get 37.0 MB/37.0 MB of archives. 126s After this operation, 75.9 MB of additional disk space will be used. 126s Get:1 /tmp/autopkgtest.dK32Vy/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 126s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 127s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 127s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 127s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 127s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 127s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 127s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 127s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 127s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 127s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 127s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 127s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 127s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 127s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 127s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 127s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 127s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 127s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 127s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 127s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 127s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 127s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 127s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 127s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 127s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 127s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 127s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 127s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 127s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 127s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 127s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 127s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 127s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 127s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 127s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 127s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 127s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 127s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 127s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 127s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 127s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 127s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 127s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 127s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 128s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 128s Get:47 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cba arm64 0.2-23-1 [248 kB] 128s Preconfiguring packages ... 128s Fetched 37.0 MB in 2s (21.8 MB/s) 128s Selecting previously unselected package fonts-dejavu-mono. 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74330 files and directories currently installed.) 129s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 129s Unpacking fonts-dejavu-mono (2.37-8) ... 129s Selecting previously unselected package fonts-dejavu-core. 129s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 129s Unpacking fonts-dejavu-core (2.37-8) ... 129s Selecting previously unselected package fontconfig-config. 129s Preparing to unpack .../02-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 129s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 129s Selecting previously unselected package libfontconfig1:arm64. 129s Preparing to unpack .../03-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 129s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 129s Selecting previously unselected package fontconfig. 129s Preparing to unpack .../04-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 129s Unpacking fontconfig (2.15.0-1ubuntu1) ... 129s Selecting previously unselected package libblas3:arm64. 129s Preparing to unpack .../05-libblas3_3.12.0-3_arm64.deb ... 129s Unpacking libblas3:arm64 (3.12.0-3) ... 129s Selecting previously unselected package libpixman-1-0:arm64. 129s Preparing to unpack .../06-libpixman-1-0_0.42.2-1_arm64.deb ... 129s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 129s Selecting previously unselected package libxcb-render0:arm64. 129s Preparing to unpack .../07-libxcb-render0_1.15-1_arm64.deb ... 129s Unpacking libxcb-render0:arm64 (1.15-1) ... 129s Selecting previously unselected package libxcb-shm0:arm64. 129s Preparing to unpack .../08-libxcb-shm0_1.15-1_arm64.deb ... 129s Unpacking libxcb-shm0:arm64 (1.15-1) ... 129s Selecting previously unselected package libxrender1:arm64. 129s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 129s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 129s Selecting previously unselected package libcairo2:arm64. 129s Preparing to unpack .../10-libcairo2_1.18.0-1_arm64.deb ... 129s Unpacking libcairo2:arm64 (1.18.0-1) ... 129s Selecting previously unselected package libdatrie1:arm64. 129s Preparing to unpack .../11-libdatrie1_0.2.13-3_arm64.deb ... 129s Unpacking libdatrie1:arm64 (0.2.13-3) ... 129s Selecting previously unselected package libdeflate0:arm64. 129s Preparing to unpack .../12-libdeflate0_1.19-1_arm64.deb ... 129s Unpacking libdeflate0:arm64 (1.19-1) ... 129s Selecting previously unselected package libgfortran5:arm64. 129s Preparing to unpack .../13-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 129s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 129s Selecting previously unselected package libgomp1:arm64. 129s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 129s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 129s Selecting previously unselected package libgraphite2-3:arm64. 130s Preparing to unpack .../15-libgraphite2-3_1.3.14-2_arm64.deb ... 130s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 130s Selecting previously unselected package libharfbuzz0b:arm64. 130s Preparing to unpack .../16-libharfbuzz0b_8.3.0-2_arm64.deb ... 130s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 130s Selecting previously unselected package x11-common. 130s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu2_all.deb ... 130s Unpacking x11-common (1:7.7+23ubuntu2) ... 130s Selecting previously unselected package libice6:arm64. 130s Preparing to unpack .../18-libice6_2%3a1.0.10-1build2_arm64.deb ... 130s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 130s Selecting previously unselected package libjpeg-turbo8:arm64. 130s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 130s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 130s Selecting previously unselected package libjpeg8:arm64. 130s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ... 130s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 130s Selecting previously unselected package liblapack3:arm64. 130s Preparing to unpack .../21-liblapack3_3.12.0-3_arm64.deb ... 130s Unpacking liblapack3:arm64 (3.12.0-3) ... 130s Selecting previously unselected package liblerc4:arm64. 130s Preparing to unpack .../22-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 130s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 130s Selecting previously unselected package libthai-data. 130s Preparing to unpack .../23-libthai-data_0.1.29-2_all.deb ... 130s Unpacking libthai-data (0.1.29-2) ... 130s Selecting previously unselected package libthai0:arm64. 130s Preparing to unpack .../24-libthai0_0.1.29-2_arm64.deb ... 130s Unpacking libthai0:arm64 (0.1.29-2) ... 130s Selecting previously unselected package libpango-1.0-0:arm64. 130s Preparing to unpack .../25-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 130s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 130s Selecting previously unselected package libpangoft2-1.0-0:arm64. 130s Preparing to unpack .../26-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 130s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 130s Selecting previously unselected package libpangocairo-1.0-0:arm64. 130s Preparing to unpack .../27-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 130s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 130s Selecting previously unselected package libpaper1:arm64. 130s Preparing to unpack .../28-libpaper1_1.1.29_arm64.deb ... 130s Unpacking libpaper1:arm64 (1.1.29) ... 130s Selecting previously unselected package libpaper-utils. 130s Preparing to unpack .../29-libpaper-utils_1.1.29_arm64.deb ... 130s Unpacking libpaper-utils (1.1.29) ... 130s Selecting previously unselected package libsharpyuv0:arm64. 130s Preparing to unpack .../30-libsharpyuv0_1.3.2-0.4_arm64.deb ... 130s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 131s Selecting previously unselected package libsm6:arm64. 131s Preparing to unpack .../31-libsm6_2%3a1.2.3-1build2_arm64.deb ... 131s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 131s Selecting previously unselected package libtcl8.6:arm64. 131s Preparing to unpack .../32-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 131s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 131s Selecting previously unselected package libjbig0:arm64. 131s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 131s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 131s Selecting previously unselected package libwebp7:arm64. 131s Preparing to unpack .../34-libwebp7_1.3.2-0.4_arm64.deb ... 131s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 131s Selecting previously unselected package libtiff6:arm64. 131s Preparing to unpack .../35-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 131s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 131s Selecting previously unselected package libxft2:arm64. 131s Preparing to unpack .../36-libxft2_2.3.6-1_arm64.deb ... 131s Unpacking libxft2:arm64 (2.3.6-1) ... 131s Selecting previously unselected package libxss1:arm64. 131s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build2_arm64.deb ... 131s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 131s Selecting previously unselected package libtk8.6:arm64. 131s Preparing to unpack .../38-libtk8.6_8.6.13-2_arm64.deb ... 131s Unpacking libtk8.6:arm64 (8.6.13-2) ... 131s Selecting previously unselected package libxt6:arm64. 131s Preparing to unpack .../39-libxt6_1%3a1.2.1-1.1_arm64.deb ... 131s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 131s Selecting previously unselected package zip. 131s Preparing to unpack .../40-zip_3.0-13_arm64.deb ... 131s Unpacking zip (3.0-13) ... 131s Selecting previously unselected package unzip. 131s Preparing to unpack .../41-unzip_6.0-28ubuntu3_arm64.deb ... 131s Unpacking unzip (6.0-28ubuntu3) ... 131s Selecting previously unselected package xdg-utils. 131s Preparing to unpack .../42-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 131s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 131s Selecting previously unselected package r-base-core. 131s Preparing to unpack .../43-r-base-core_4.3.2-1build1_arm64.deb ... 131s Unpacking r-base-core (4.3.2-1build1) ... 132s Selecting previously unselected package r-cran-proxy. 132s Preparing to unpack .../44-r-cran-proxy_0.4-27-1_arm64.deb ... 132s Unpacking r-cran-proxy (0.4-27-1) ... 132s Selecting previously unselected package r-cran-cba. 132s Preparing to unpack .../45-r-cran-cba_0.2-23-1_arm64.deb ... 132s Unpacking r-cran-cba (0.2-23-1) ... 132s Selecting previously unselected package autopkgtest-satdep. 132s Preparing to unpack .../46-1-autopkgtest-satdep.deb ... 132s Unpacking autopkgtest-satdep (0) ... 132s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 132s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 132s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 132s Setting up libpaper1:arm64 (1.1.29) ... 132s 132s Creating config file /etc/papersize with new version 132s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 132s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 132s Setting up libdatrie1:arm64 (0.2.13-3) ... 132s Setting up libxcb-render0:arm64 (1.15-1) ... 132s Setting up unzip (6.0-28ubuntu3) ... 132s Setting up x11-common (1:7.7+23ubuntu2) ... 133s Setting up libdeflate0:arm64 (1.19-1) ... 133s Setting up libxcb-shm0:arm64 (1.15-1) ... 133s Setting up libpaper-utils (1.1.29) ... 133s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 133s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 133s Setting up zip (3.0-13) ... 133s Setting up libblas3:arm64 (3.12.0-3) ... 133s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 133s Setting up fonts-dejavu-mono (2.37-8) ... 133s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 133s Setting up fonts-dejavu-core (2.37-8) ... 133s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 133s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 133s Setting up libwebp7:arm64 (1.3.2-0.4) ... 133s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 133s Setting up libthai-data (0.1.29-2) ... 133s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 133s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 133s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 133s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 133s Setting up libice6:arm64 (2:1.0.10-1build2) ... 133s Setting up liblapack3:arm64 (3.12.0-3) ... 133s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 133s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 133s Setting up libthai0:arm64 (0.1.29-2) ... 133s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 133s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 133s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 133s Setting up fontconfig (2.15.0-1ubuntu1) ... 135s Regenerating fonts cache... done. 135s Setting up libxft2:arm64 (2.3.6-1) ... 135s Setting up libtk8.6:arm64 (8.6.13-2) ... 135s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 135s Setting up libcairo2:arm64 (1.18.0-1) ... 135s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 135s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 135s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 135s Setting up r-base-core (4.3.2-1build1) ... 136s 136s Creating config file /etc/R/Renviron with new version 136s Setting up r-cran-proxy (0.4-27-1) ... 136s Setting up r-cran-cba (0.2-23-1) ... 136s Setting up autopkgtest-satdep (0) ... 136s Processing triggers for man-db (2.12.0-3) ... 137s Processing triggers for install-info (7.1-3) ... 137s Processing triggers for libc-bin (2.39-0ubuntu2) ... 141s (Reading database ... 76402 files and directories currently installed.) 141s Removing autopkgtest-satdep (0) ... 142s autopkgtest [19:39:18]: test run-unit-test: [----------------------- 142s BEGIN TEST apply.R 142s 142s R version 4.3.2 (2023-10-31) -- "Eye Holes" 142s Copyright (C) 2023 The R Foundation for Statistical Computing 142s Platform: aarch64-unknown-linux-gnu (64-bit) 142s 142s R is free software and comes with ABSOLUTELY NO WARRANTY. 142s You are welcome to redistribute it under certain conditions. 142s Type 'license()' or 'licence()' for distribution details. 142s 142s R is a collaborative project with many contributors. 142s Type 'contributors()' for more information and 142s 'citation()' on how to cite R or R packages in publications. 142s 142s Type 'demo()' for some demos, 'help()' for on-line help, or 142s 'help.start()' for an HTML browser interface to help. 142s Type 'q()' to quit R. 142s 143s > 143s > ## tests on apply C wrappers 143s > 143s > library(proxy) 143s 143s Attaching package: ‘proxy’ 143s 143s The following objects are masked from ‘package:stats’: 143s 143s as.dist, dist 143s 143s The following object is masked from ‘package:base’: 143s 143s as.matrix 143s 143s > 143s > set.seed(20070630) 143s > 143s > ## matrix 143s > 143s > f <- function(x, y) sum(x*y) / sqrt(sum(x*x)) / sqrt(sum(y*y)) 143s > 143s > x <- matrix(runif(20), 5, 4) 143s > x 143s [,1] [,2] [,3] [,4] 143s [1,] 0.4595829 0.246283120 0.6662151 0.2658000 143s [2,] 0.8390691 0.002929016 0.3449861 0.4751930 143s [3,] 0.0377036 0.300615279 0.1399626 0.5143060 143s [4,] 0.7621676 0.963274350 0.4358104 0.7934745 143s [5,] 0.1211588 0.452265898 0.8005272 0.3062947 143s > y <- matrix(runif(20), 5, 4) 143s > y 143s [,1] [,2] [,3] [,4] 143s [1,] 0.3435311 0.45003283 0.1931588 0.22999466 143s [2,] 0.4417228 0.78191550 0.9028450 0.01728483 143s [3,] 0.3872093 0.45154308 0.7324979 0.52502253 143s [4,] 0.9119128 0.21720445 0.3986998 0.72623146 143s [5,] 0.9374529 0.04343485 0.8170873 0.69974714 143s > 143s > .External(proxy:::R_apply_dist_matrix, x, NULL, FALSE, f) 143s 1 2 3 4 143s 2 0.8175510 143s 3 0.5909955 0.5179092 143s 4 0.8046383 0.7485219 0.8416675 143s 5 0.9026897 0.5245741 0.6848730 0.7514756 143s > .External(proxy:::R_apply_dist_matrix, x, x, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 1.0000000 0.8175510 0.5909955 0.8046383 0.9026897 143s [2,] 0.8175510 1.0000000 0.5179092 0.7485219 0.5245741 143s [3,] 0.5909955 0.5179092 1.0000000 0.8416675 0.6848730 143s [4,] 0.8046383 0.7485219 0.8416675 1.0000000 0.7514756 143s [5,] 0.9026897 0.5245741 0.6848730 0.7514756 1.0000000 143s > .External(proxy:::R_apply_dist_matrix, x, y, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 0.8068091 0.8869376 0.9573450 0.8394141 0.9257044 143s [2,] 0.7091915 0.5310191 0.7490815 0.9743857 0.9583243 143s [3,] 0.7471004 0.4955903 0.7898068 0.6896626 0.5971429 143s [4,] 0.9837110 0.7703657 0.8896691 0.8665744 0.7655715 143s [5,] 0.7512326 0.9126553 0.9466108 0.6140860 0.7184058 143s > .External(proxy:::R_apply_dist_matrix, x, y, TRUE, f) 143s [1] 0.8068091 0.5310191 0.7898068 0.8665744 0.7184058 143s > 143s > # coerce 143s > 143s > z <- y * 100 143s > storage.mode(z) <- "integer" 143s > .External(proxy:::R_apply_dist_matrix, x, z, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 0.8035753 0.8851147 0.9568709 0.8363210 0.9255173 143s [2,] 0.7027894 0.5281041 0.7457478 0.9754800 0.9584822 143s [3,] 0.7399077 0.4909526 0.7896421 0.6859131 0.5945390 143s [4,] 0.9811939 0.7674593 0.8884016 0.8638128 0.7638742 143s [5,] 0.7490644 0.9109332 0.9482222 0.6083438 0.7173810 143s > .External(proxy:::R_apply_dist_matrix, z, x, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 0.8035753 0.7027894 0.7399077 0.9811939 0.7490644 143s [2,] 0.8851147 0.5281041 0.4909526 0.7674593 0.9109332 143s [3,] 0.9568709 0.7457478 0.7896421 0.8884016 0.9482222 143s [4,] 0.8363210 0.9754800 0.6859131 0.8638128 0.6083438 143s [5,] 0.9255173 0.9584822 0.5945390 0.7638742 0.7173810 143s > .External(proxy:::R_apply_dist_matrix, z, z, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 1.0000000 0.8363694 0.8593771 0.8075186 0.7133480 143s [2,] 0.8363694 1.0000000 0.8668551 0.5849013 0.6553123 143s [3,] 0.8593771 0.8668551 1.0000000 0.8253313 0.8715788 143s [4,] 0.8075186 0.5849013 0.8253313 1.0000000 0.9495662 143s [5,] 0.7133480 0.6553123 0.8715788 0.9495662 1.0000000 143s > .External(proxy:::R_apply_dist_matrix, z, NULL, FALSE, f) 143s 1 2 3 4 143s 2 0.8363694 143s 3 0.8593771 0.8668551 143s 4 0.8075186 0.5849013 0.8253313 143s 5 0.7133480 0.6553123 0.8715788 0.9495662 143s > 143s > ## list 143s > 143s > x <- unlist(apply(x, 1, list), recursive = FALSE) 143s > x 143s [[1]] 143s [1] 0.4595829 0.2462831 0.6662151 0.2658000 143s 143s [[2]] 143s [1] 0.839069104 0.002929016 0.344986119 0.475192965 143s 143s [[3]] 143s [1] 0.0377036 0.3006153 0.1399626 0.5143060 143s 143s [[4]] 143s [1] 0.7621676 0.9632744 0.4358104 0.7934745 143s 143s [[5]] 143s [1] 0.1211588 0.4522659 0.8005272 0.3062947 143s 143s > y <- unlist(apply(y, 1, list), recursive = FALSE) 143s > 143s > .External(proxy:::R_apply_dist_list, x, NULL, FALSE, f) 143s 1 2 3 4 143s 2 0.8175510 143s 3 0.5909955 0.5179092 143s 4 0.8046383 0.7485219 0.8416675 143s 5 0.9026897 0.5245741 0.6848730 0.7514756 143s > .External(proxy:::R_apply_dist_list, x, x, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 1.0000000 0.8175510 0.5909955 0.8046383 0.9026897 143s [2,] 0.8175510 1.0000000 0.5179092 0.7485219 0.5245741 143s [3,] 0.5909955 0.5179092 1.0000000 0.8416675 0.6848730 143s [4,] 0.8046383 0.7485219 0.8416675 1.0000000 0.7514756 143s [5,] 0.9026897 0.5245741 0.6848730 0.7514756 1.0000000 143s > .External(proxy:::R_apply_dist_list, x, y, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 0.8068091 0.8869376 0.9573450 0.8394141 0.9257044 143s [2,] 0.7091915 0.5310191 0.7490815 0.9743857 0.9583243 143s [3,] 0.7471004 0.4955903 0.7898068 0.6896626 0.5971429 143s [4,] 0.9837110 0.7703657 0.8896691 0.8665744 0.7655715 143s [5,] 0.7512326 0.9126553 0.9466108 0.6140860 0.7184058 143s > .External(proxy:::R_apply_dist_list, x, y, TRUE, f) 143s [1] 0.8068091 0.5310191 0.7898068 0.8665744 0.7184058 143s > 143s > ## logical matrix 143s > 143s > f <- function(a, b, c, d, n) 143s + a / sqrt(a+b) / sqrt(a+c) 143s > 143s > x <- t(sapply(x, ">", 0.5)) 143s > x 143s [,1] [,2] [,3] [,4] 143s [1,] FALSE FALSE TRUE FALSE 143s [2,] TRUE FALSE FALSE FALSE 143s [3,] FALSE FALSE FALSE TRUE 143s [4,] TRUE TRUE FALSE TRUE 143s [5,] FALSE FALSE TRUE FALSE 143s > y <- t(sapply(y, ">", 0.5)) 143s > 143s > .External(proxy:::R_apply_dist_binary_matrix, x, NULL, FALSE, f) 143s 1 2 3 4 143s 2 0.0000000 143s 3 0.0000000 0.0000000 143s 4 0.0000000 0.5773503 0.5773503 143s 5 1.0000000 0.0000000 0.0000000 0.0000000 143s > .External(proxy:::R_apply_dist_binary_matrix, x, x, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 1 0.0000000 0.0000000 0.0000000 1 143s [2,] 0 1.0000000 0.0000000 0.5773503 0 143s [3,] 0 0.0000000 1.0000000 0.5773503 0 143s [4,] 0 0.5773503 0.5773503 1.0000000 0 143s [5,] 1 0.0000000 0.0000000 0.0000000 1 143s > .External(proxy:::R_apply_dist_binary_matrix, x, y, FALSE, f) 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] NaN 0.7071068 0.7071068 0.0000000 0.5773503 143s [2,] NaN 0.0000000 0.0000000 0.7071068 0.5773503 143s [3,] NaN 0.0000000 0.7071068 0.7071068 0.5773503 143s [4,] NaN 0.4082483 0.4082483 0.8164966 0.6666667 143s [5,] NaN 0.7071068 0.7071068 0.0000000 0.5773503 143s > .External(proxy:::R_apply_dist_binary_matrix, x, y, TRUE, f) 143s [1] NaN 0.0000000 0.7071068 0.8164966 0.5773503 143s > 143s > ## data.frame 143s > 143s > f <- function(x, y) sum(x*y) / sqrt(sum(x*x)) / sqrt(sum(y*y)) 143s > 143s > x <- data.frame(unlist(apply(x, 2, list), recursive = FALSE)) 143s > names(x) <- letters[1:4] 143s > x 143s a b c d 143s 1 FALSE FALSE TRUE FALSE 143s 2 TRUE FALSE FALSE FALSE 143s 3 FALSE FALSE FALSE TRUE 143s 4 TRUE TRUE FALSE TRUE 143s 5 FALSE FALSE TRUE FALSE 143s > y <- data.frame(unlist(apply(y, 2, list), recursive = FALSE)) 143s > names(y) <- letters[1:4] 143s > 143s > .External(proxy:::R_apply_dist_data_frame, x, NULL, FALSE, f) 143s 1 2 3 4 143s 2 0.0000000 143s 3 0.0000000 0.0000000 143s 4 0.0000000 0.5773503 0.5773503 143s 5 1.0000000 0.0000000 0.0000000 0.0000000 143s > .External(proxy:::R_apply_dist_data_frame, x, x, FALSE, f) 143s 1 2 3 4 5 143s 1 1 0.0000000 0.0000000 0.0000000 1 143s 2 0 1.0000000 0.0000000 0.5773503 0 143s 3 0 0.0000000 1.0000000 0.5773503 0 143s 4 0 0.5773503 0.5773503 1.0000000 0 143s 5 1 0.0000000 0.0000000 0.0000000 1 143s > .External(proxy:::R_apply_dist_data_frame, x, y, FALSE, f) 143s 1 2 3 4 5 143s 1 NaN 0.7071068 0.7071068 0.0000000 0.5773503 143s 2 NaN 0.0000000 0.0000000 0.7071068 0.5773503 143s 3 NaN 0.0000000 0.7071068 0.7071068 0.5773503 143s 4 NaN 0.4082483 0.4082483 0.8164966 0.6666667 143s 5 NaN 0.7071068 0.7071068 0.0000000 0.5773503 143s > .External(proxy:::R_apply_dist_data_frame, x, y, TRUE, f) 143s [1] NaN 0.0000000 0.7071068 0.8164966 0.5773503 143s > 143s > # 143s > 143s > f <- function(x, y) { 143s + if (rownames(x) == 1 && rownames(y) == 1) { 143s + print(x) 143s + str(x) 143s + print(y) 143s + } 143s + sum(x == y) / length(x) 143s + } 143s > 143s > x <- data.frame(1:5, LETTERS[1:5], stringsAsFactors = FALSE) 143s > x 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s 2 2 B 143s 3 3 C 143s 4 4 D 143s 5 5 E 143s > 143s > y <- data.frame(1:6, LETTERS[c(1,1:5)], 143s + row.names = letters[1:6], 143s + stringsAsFactors = FALSE) 143s > y 143s X1.6 LETTERS.c.1..1.5.. 143s a 1 A 143s b 2 A 143s c 3 B 143s d 4 C 143s e 5 D 143s f 6 E 143s > 143s > all.equal(x, y) 143s [1] "Names: 2 string mismatches" 143s [2] "Attributes: < Component “row.names”: Modes: numeric, character >" 143s [3] "Attributes: < Component “row.names”: Lengths: 5, 6 >" 143s [4] "Attributes: < Component “row.names”: target is numeric, current is character >" 143s [5] "Component 1: Numeric: lengths (5, 6) differ" 143s [6] "Component 2: Lengths (5, 6) differ (string compare on first 5)" 143s [7] "Component 2: 4 string mismatches" 143s > identical(attributes(x[[1]]), attributes(y[[1]])) 143s [1] TRUE 143s > identical(attributes(x[[2]]), attributes(y[[2]])) 143s [1] TRUE 143s > 143s > .External(proxy:::R_apply_dist_data_frame, x, NULL, FALSE, f) 143s 1 2 3 4 143s 2 0 143s 3 0 0 143s 4 0 0 0 143s 5 0 0 0 0 143s > .External(proxy:::R_apply_dist_data_frame, x, x, FALSE, f) 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s 'data.frame': 1 obs. of 2 variables: 143s $ X1.5 : int 1 143s $ LETTERS.1.5.: chr "A" 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s 1 2 3 4 5 143s 1 1 0 0 0 0 143s 2 0 1 0 0 0 143s 3 0 0 1 0 0 143s 4 0 0 0 1 0 143s 5 0 0 0 0 1 143s > .External(proxy:::R_apply_dist_data_frame, x, y, FALSE, f) 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s 'data.frame': 1 obs. of 2 variables: 143s $ X1.5 : int 1 143s $ LETTERS.1.5.: chr "A" 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s a b c d e f 143s 1 1 0.5 0.0 0.0 0.0 0.0 143s 2 0 0.5 0.5 0.0 0.0 0.0 143s 3 0 0.0 0.5 0.5 0.0 0.0 143s 4 0 0.0 0.0 0.5 0.5 0.0 143s 5 0 0.0 0.0 0.0 0.5 0.5 143s > .External(proxy:::R_apply_dist_data_frame, x, y[-6,], TRUE, f) 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s 'data.frame': 1 obs. of 2 variables: 143s $ X1.5 : int 1 143s $ LETTERS.1.5.: chr "A" 143s X1.5 LETTERS.1.5. 143s 1 1 A 143s [1] 1.0 0.5 0.5 0.5 0.5 143s > 143s > 143s > # test parameters 143s > 143s > f <- function(x, y, p = 1) 143s + sum(x == y) / length(x) * p 143s > 143s > .External(proxy:::R_apply_dist_data_frame, x, y[-6,], TRUE, f) 143s [1] 1.0 0.5 0.5 0.5 0.5 143s > .External(proxy:::R_apply_dist_data_frame, x, y[-6,], TRUE, f, p = 2) 143s [1] 2 1 1 1 1 143s > 143s > ### 143s > 143s BEGIN TEST distance.R 143s 143s R version 4.3.2 (2023-10-31) -- "Eye Holes" 143s Copyright (C) 2023 The R Foundation for Statistical Computing 143s Platform: aarch64-unknown-linux-gnu (64-bit) 143s 143s R is free software and comes with ABSOLUTELY NO WARRANTY. 143s You are welcome to redistribute it under certain conditions. 143s Type 'license()' or 'licence()' for distribution details. 143s 143s R is a collaborative project with many contributors. 143s Type 'contributors()' for more information and 143s 'citation()' on how to cite R or R packages in publications. 143s 143s Type 'demo()' for some demos, 'help()' for on-line help, or 143s 'help.start()' for an HTML browser interface to help. 143s Type 'q()' to quit R. 143s 143s > 143s > ### ceeboo 2007 143s > 143s > ## todo: special values NaN, NA, and Inf 143s > 143s > library("proxy") 143s 143s Attaching package: ‘proxy’ 143s 143s The following objects are masked from ‘package:stats’: 143s 143s as.dist, dist 143s 143s The following object is masked from ‘package:base’: 143s 143s as.matrix 143s 143s > 143s > set.seed(20070630) 143s > 143s > ## 143s > 143s > x <- matrix(runif(20),5,4) 143s > inherits(x, "matrix") 143s [1] TRUE 143s > rownames(x) <- LETTERS[1:5] 143s > y <- x 143s > y[2,] <- x[1,] <- 0 143s > 143s > x 143s [,1] [,2] [,3] [,4] 143s A 0.0000000 0.000000000 0.0000000 0.0000000 143s B 0.8390691 0.002929016 0.3449861 0.4751930 143s C 0.0377036 0.300615279 0.1399626 0.5143060 143s D 0.7621676 0.963274350 0.4358104 0.7934745 143s E 0.1211588 0.452265898 0.8005272 0.3062947 143s > y 143s [,1] [,2] [,3] [,4] 143s A 0.4595829 0.2462831 0.6662151 0.2658000 143s B 0.0000000 0.0000000 0.0000000 0.0000000 143s C 0.0377036 0.3006153 0.1399626 0.5143060 143s D 0.7621676 0.9632744 0.4358104 0.7934745 143s E 0.1211588 0.4522659 0.8005272 0.3062947 143s > 143s > ## user interfaces 143s > 143s > r <- .Call("R_minkowski_dist", x, NULL, FALSE, 1, PACKAGE = "proxy") 143s > all.equal(c(r), c(stats::dist(x, method = "minkowski", p = 1))) 143s [1] TRUE 143s > r 143s A B C D 143s B 1.6621772 143s C 0.9925875 1.3431883 143s D 2.9547267 1.4463526 1.9621392 143s E 1.6802466 1.7916865 1.1036817 2.0039138 143s > .Call("R_minkowski_dist", x, x, FALSE, 1, PACKAGE = "proxy") 143s A B C D E 143s A 0.0000000 1.662177 0.9925875 2.954727 1.680247 143s B 1.6621772 0.000000 1.3431883 1.446353 1.791686 143s C 0.9925875 1.343188 0.0000000 1.962139 1.103682 143s D 2.9547267 1.446353 1.9621392 0.000000 2.003914 143s E 1.6802466 1.791686 1.1036817 2.003914 0.000000 143s > .Call("R_minkowski_dist", x, y, FALSE, 1, PACKAGE = "proxy") 143s A B C D E 143s A 1.6378810 0.0000000 0.9925875 2.954727 1.680247 143s B 1.1534623 1.6621772 1.3431883 1.446353 1.791686 143s C 1.2509699 0.9925875 0.0000000 1.962139 1.103682 143s D 1.7776551 2.9547267 1.9621392 0.000000 2.003914 143s E 0.7192137 1.6802466 1.1036817 2.003914 0.000000 143s > .Call("R_minkowski_dist", x, y, TRUE, 1, PACKAGE = "proxy") 143s [1] 1.637881 1.662177 0.000000 0.000000 0.000000 143s > 143s > dfun <- paste("R",c("euclidean", "maximum", "manhattan", "canberra", "binary", "matching", "fuzzy", "mutual"),"dist", sep = "_") 143s > 143s > for (f in dfun) { 143s + cat("\nTesting ",f,"\n\n",sep="") 143s + r <- try(do.call(".Call", list(f, x, NULL, FALSE, PACKAGE = "proxy"))) 143s + if ( inherits(r, "try-error")) 143s + next 143s + s <- try(stats::dist(x, method = gsub("R_|_dist", "", f))) 143s + if (!inherits(s, "try-error")) 143s + print(all.equal(c(r), c(s))) 143s + print(r) 143s + print(do.call(".Call", list(f, x, x, FALSE, PACKAGE = "proxy"))) 143s + print(do.call(".Call", list(f, x, y, FALSE, PACKAGE = "proxy"))) 143s + print(do.call(".Call", list(f, x, y, TRUE, PACKAGE = "proxy"))) 143s + } 143s 143s Testing R_euclidean_dist 143s 143s [1] TRUE 143s A B C D 143s B 1.0241432 143s C 0.6130998 0.8799820 143s D 1.5258864 1.0186899 1.0627446 143s E 0.9766699 0.9763929 0.7138466 1.0209722 143s A B C D E 143s A 0.0000000 1.0241432 0.6130998 1.525886 0.9766699 143s B 1.0241432 0.0000000 0.8799820 1.018690 0.9763929 143s C 0.6130998 0.8799820 0.0000000 1.062745 0.7138466 143s D 1.5258864 1.0186899 1.0627446 0.000000 1.0209722 143s E 0.9766699 0.9763929 0.7138466 1.020972 0.0000000 143s A B C D E 143s A 0.8867716 0.0000000 0.6130998 1.525886 0.9766699 143s B 0.5918315 1.0241432 0.8799820 1.018690 0.9763929 143s C 0.7208543 0.6130998 0.0000000 1.062745 0.7138466 143s D 0.9680706 1.5258864 1.0627446 0.000000 1.0209722 143s E 0.4202848 0.9766699 0.7138466 1.020972 0.0000000 143s [1] 0.8867716 1.0241432 0.0000000 0.0000000 0.0000000 143s 143s Testing R_maximum_dist 143s 143s [1] TRUE 143s A B C D 143s B 0.8390691 143s C 0.5143060 0.8013655 143s D 0.9632744 0.9603453 0.7244640 143s E 0.8005272 0.7179103 0.6605646 0.6410087 143s A B C D E 143s A 0.0000000 0.8390691 0.5143060 0.9632744 0.8005272 143s B 0.8390691 0.0000000 0.8013655 0.9603453 0.7179103 143s C 0.5143060 0.8013655 0.0000000 0.7244640 0.6605646 143s D 0.9632744 0.9603453 0.7244640 0.0000000 0.6410087 143s E 0.8005272 0.7179103 0.6605646 0.6410087 0.0000000 143s A B C D E 143s A 0.6662151 0.0000000 0.5143060 0.9632744 0.8005272 143s B 0.3794862 0.8390691 0.8013655 0.9603453 0.7179103 143s C 0.5262524 0.5143060 0.0000000 0.7244640 0.6605646 143s D 0.7169912 0.9632744 0.7244640 0.0000000 0.6410087 143s E 0.3384240 0.8005272 0.6605646 0.6410087 0.0000000 143s [1] 0.6662151 0.8390691 0.0000000 0.0000000 0.0000000 143s 143s Testing R_manhattan_dist 143s 143s [1] TRUE 143s A B C D 143s B 1.6621772 143s C 0.9925875 1.3431883 143s D 2.9547267 1.4463526 1.9621392 143s E 1.6802466 1.7916865 1.1036817 2.0039138 143s A B C D E 143s A 0.0000000 1.662177 0.9925875 2.954727 1.680247 143s B 1.6621772 0.000000 1.3431883 1.446353 1.791686 143s C 0.9925875 1.343188 0.0000000 1.962139 1.103682 143s D 2.9547267 1.446353 1.9621392 0.000000 2.003914 143s E 1.6802466 1.791686 1.1036817 2.003914 0.000000 143s A B C D E 143s A 1.6378810 0.0000000 0.9925875 2.954727 1.680247 143s B 1.1534623 1.6621772 1.3431883 1.446353 1.791686 143s C 1.2509699 0.9925875 0.0000000 1.962139 1.103682 143s D 1.7776551 2.9547267 1.9621392 0.000000 2.003914 143s E 0.7192137 1.6802466 1.1036817 2.003914 0.000000 143s [1] 1.637881 1.662177 0.000000 0.000000 0.000000 143s 143s Testing R_canberra_dist 143s 143s [1] TRUE 143s A B C D 143s B 4.000000 143s C 4.000000 2.356997 143s D 4.000000 1.409165 2.157322 143s E 4.000000 2.348575 1.682606 1.824656 143s A B C D E 143s A NA 4.000000 4.000000 4.000000 4.000000 143s B 4 0.000000 2.356997 1.409165 2.348575 143s C 4 2.356997 0.000000 2.157322 1.682606 143s D 4 1.409165 2.157322 0.000000 1.824656 143s E 4 2.348575 1.682606 1.824656 0.000000 143s A B C D E 143s A 4.000000 NA 4.000000 4.000000 4.000000 143s B 1.868964 4 2.356997 1.409165 2.348575 143s C 1.919038 4 0.000000 2.157322 1.682606 143s D 1.547657 4 2.157322 0.000000 1.824656 143s E 1.039972 4 1.682606 1.824656 0.000000 143s [1] 4 4 0 0 0 143s 143s Testing R_binary_dist 143s 143s [1] TRUE 143s A B C D 143s B 1 143s C 1 0 143s D 1 0 0 143s E 1 0 0 0 143s A B C D E 143s A 0 1 1 1 1 143s B 1 0 0 0 0 143s C 1 0 0 0 0 143s D 1 0 0 0 0 143s E 1 0 0Error in .Call("R_matching_dist", structure(c(0, 0.839069103589281, 0.037703595822677, : 143s "R_matching_dist" not available for .Call() for package "proxy" 143s Error in stats::dist(x, method = gsub("R_|_dist", "", f)) : 143s invalid distance method 143s Error in .Call("R_mutual_dist", structure(c(0, 0.839069103589281, 0.037703595822677, : 143s "R_mutual_dist" not available for .Call() for package "proxy" 143s 0 0 143s A B C D E 143s A 1 0 1 1 1 143s B 0 1 0 0 0 143s C 0 1 0 0 0 143s D 0 1 0 0 0 143s E 0 1 0 0 0 143s [1] 1 1 0 0 0 143s 143s Testing R_matching_dist 143s 143s 143s Testing R_fuzzy_dist 143s 143s A B C D 143s B 1.0000000 143s C 1.0000000 0.6719380 143s D 1.0000000 0.4770877 0.6640679 143s E 1.0000000 0.6979540 0.5844973 0.6036897 143s A B C D E 143s A 0 1.0000000 1.0000000 1.0000000 1.0000000 143s B 1 0.0000000 0.6719380 0.4770877 0.6979540 143s C 1 0.6719380 0.0000000 0.6640679 0.5844973 143s D 1 0.4770877 0.6640679 0.0000000 0.6036897 143s E 1 0.6979540 0.5844973 0.6036897 0.0000000 143s A B C D E 143s A 1.0000000 0 1.0000000 1.0000000 1.0000000 143s B 0.5180002 1 0.6719380 0.4770877 0.6979540 143s C 0.6445909 1 0.0000000 0.6640679 0.5844973 143s D 0.5581104 1 0.6640679 0.0000000 0.6036897 143s E 0.3562808 1 0.5844973 0.6036897 0.0000000 143s [1] 1 1 0 0 0 143s 143s Testing R_mutual_dist 143s 143s > 143s > ## no longer optimized 143s > 143s > .Call("R_ejaccard", x, NULL, FALSE, PACKAGE = "proxy") 143s A B C D 143s B 0.0000000 143s C 0.0000000 0.2957500 143s D 0.0000000 0.5298998 0.4107824 143s E 0.0000000 0.3549987 0.4459170 0.5179277 143s > .Call("R_ejaccard", x, x, FALSE, PACKAGE = "proxy") 143s A B C D E 143s A 1 0.0000000 0.0000000 0.0000000 0.0000000 143s B 0 1.0000000 0.2957500 0.5298998 0.3549987 143s C 0 0.2957500 1.0000000 0.4107824 0.4459170 143s D 0 0.5298998 0.4107824 1.0000000 0.5179277 143s E 0 0.3549987 0.4459170 0.5179277 1.0000000 143s > .Call("R_ejaccard", x, y, FALSE, PACKAGE = "proxy") 143s A B C D E 143s A 0.0000000 1 0.0000000 0.0000000 0.0000000 143s B 0.6794648 0 0.2957500 0.5298998 0.3549987 143s C 0.3820854 0 1.0000000 0.4107824 0.4459170 143s D 0.5374164 0 0.4107824 1.0000000 0.5179277 143s E 0.8157020 0 0.4459170 0.5179277 1.0000000 143s > .Call("R_ejaccard", x, y, TRUE, PACKAGE = "proxy") 143s [1] 0 0 1 1 1 143s > 143s > .Call("R_cosine", x, NULL, FALSE, PACKAGE = "proxy") 143s A B C D 143s B 0.0000000 143s C 0.0000000 0.5179092 143s D 0.0000000 0.7485219 0.8416675 143s E 0.0000000 0.5245741 0.6848730 0.7514756 143s > .Call("R_cosine", x, x, FALSE, PACKAGE = "proxy") 143s A B C D E 143s A 1 0.0000000 0.0000000 0.0000000 0.0000000 143s B 0 1.0000000 0.5179092 0.7485219 0.5245741 143s C 0 0.5179092 1.0000000 0.8416675 0.6848730 143s D 0 0.7485219 0.8416675 1.0000000 0.7514756 143s E 0 0.5245741 0.6848730 0.7514756 1.0000000 143s > .Call("R_cosine", x, y, FALSE, PACKAGE = "proxy") 143s A B C D E 143s A 0.0000000 1 0.0000000 0.0000000 0.0000000 143s B 0.8175510 0 0.5179092 0.7485219 0.5245741 143s C 0.5909955 0 1.0000000 0.8416675 0.6848730 143s D 0.8046383 0 0.8416675 1.0000000 0.7514756 143s E 0.9026897 0 0.6848730 0.7514756 1.0000000 143s > .Call("R_cosine", x, y, TRUE, PACKAGE = "proxy") 143s [1] 0 0 1 1 1 143s > 143s > x <- matrix(x > 0.5, 5,4) 143s > y <- matrix(y > 0.5, 5,4) 143s > 143s > .Call("R_bjaccard", x, NULL, FALSE, PACKAGE = "proxy") 143s 1 2 3 4 143s 2 0.0000000 143s 3 0.0000000 0.0000000 143s 4 0.0000000 0.3333333 0.3333333 143s 5 0.0000000 0.0000000 0.0000000 0.0000000 143s > .Call("R_bjaccard", x, x, FALSE, PACKAGE = "proxy") 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 1 0.0000000 0.0000000 0.0000000 0 143s [2,] 0 1.0000000 0.0000000 0.3333333 0 143s [3,] 0 0.0000000 1.0000000 0.3333333 0 143s [4,] 0 0.3333333 0.3333333 1.0000000 0 143s [5,] 0 0.0000000 0.0000000 0.0000000 1 143s > .Call("R_bjaccard", x, y, FALSE, PACKAGE = "proxy") 143s [,1] [,2] [,3] [,4] [,5] 143s [1,] 0 1 0.0000000 0.0000000 0 143s [2,] 0 0 0.0000000 0.3333333 0 143s [3,] 0 0 1.0000000 0.3333333 0 143s [4,] 0 0 0.3333333 1.0000000 0 143s [5,] 1 0 0.0000000 0.0000000 1 143s > .Call("R_bjaccard", x, y, TRUE, PACKAGE = "proxy") 143s [1] 0 0 1 1 1 143s > 143s > ### 143s > 143s BEGIN TEST distcalls.R 143s 143s R version 4.3.2 (2023-10-31) -- "Eye Holes" 143s Copyright (C) 2023 The R Foundation for Statistical Computing 143s Platform: aarch64-unknown-linux-gnu (64-bit) 143s 143s R is free software and comes with ABSOLUTELY NO WARRANTY. 143s You are welcome to redistribute it under certain conditions. 143s Type 'license()' or 'licence()' for distribution details. 143s 143s R is a collaborative project with many contributors. 143s Type 'contributors()' for more information and 143s 'citation()' on how to cite R or R packages in publications. 143s 143s Type 'demo()' for some demos, 'help()' for on-line help, or 143s 'help.start()' for an HTML browser interface to help. 143s Type 'q()' to quit R. 143s 143s > ################################# 143s > ## Test for dist calls 143s > ################################## 143s > 143s > library(proxy) 143s 143s Attaching package: ‘proxy’ 143s 143s The following objects are masked from ‘package:stats’: 143s 143s as.dist, dist 143s 143s The following object is masked from ‘package:base’: 143s 143s as.matrix 143s 143s > 143s > set.seed(20140107) 143s > 143s > ## get all measures 143s > proxies = pr_DB$get_entry_names() 143s > 143s > ## remove special cases 143s > proxies = setdiff(proxies, c("Mahalanobis", "Minkowski", "Stiles", "Levenshtein", "fJaccard")) 143s > 143s > ## create test data 143s > x = matrix(1:100, 10) 143s > 143s > ## test function: checks if dist(x) == dist(x,x) for all measures, 143s > ## and if diag(dist(x, x)) == diag(x, x, pairwise = TRUE) 143s > prtest <- function(...) { 143s + CD <- dist(x, x, ...) 143s + all(as.matrix(dist(x, ...)) == CD) && 143s + all(diag(CD) == dist(x, x, pairwise = TRUE, ...)) 143s + } 143s > 143s > ## loop over all measures (except special cases) 143s > for (i in proxies) 143s + {cat(i); prtest(i); cat(": OK.\n")} 143s Jaccard: OK. 143s Kulczynski1: OK. 143s Kulczynski2: OK. 143s Mountford: OK. 143s Fager: OK. 143s Russel: OK. 143s simple matching: OK. 143s Hamman: OK. 143s Faith: OK. 143s Tanimoto: OK. 143s Dice: OK. 143s Phi: OK. 143s Michael: OK. 143s Mozley: OK. 143s Yule: OK. 143s Yule2: OK. 143s Ochiai: OK. 143s Simpson: OK. 143s Braun-Blanquet: OK. 143s cosine: OK. 143s angular: OK. 143s eJaccard: OK. 143s eDice: OK. 143s correlation: OK. 143s Chi-squared: OK. 143s Phi-squared: OK. 144s Tschuprow: OK. 144s Cramer: OK. 144s Pearson: OK. 144s Gower: OK. 144s Euclidean: OK. 144s Bhjattacharyya: OK. 144s Manhattan: OK. 144s supremum: OK. 144s Canberra: OK. 144s Wave: OK. 144s divergence: OK. 144s Kullback: OK. 144s Bray: OK. 144s Soergel: OK. 144s Podani: OK. 144s Chord: OK. 144s Geodesic: OK. 144s Whittaker: OK. 144s Hellinger: OK. 144s > 144s > ## Minkowski 144s > for (j in c(0.5, 1, 2, 3, Inf)) 144s + {cat("Minkowski: p =", j); prtest("Minkowski", p = j); cat(": OK.\n")} 144s Minkowski: p = 0.5: OK. 144s Minkowski: p = 1: OK. 144s Minkowski: p = 2: OK. 144s Minkowski: p = 3: OK. 144s Minkowski: p = Inf: OK. 144s > 144s > ## Mahalanobis (need non-singular matrix) 144s > x = as.matrix(iris[1:50,-5]) 144s > prtest("Mahalanobis") 144s [1] TRUE 144s > 144s > ## fJaccard (needs values in unit interval) 144s > x = as.matrix(1:100/100, 10) 144s > prtest("fJaccard") 144s [1] TRUE 144s > 144s > ## produce binary matrix 144s > x = matrix(rbinom(100,1,0.7), 10) 144s > 144s > ## Stiles (gives a lot of warnings due to log) 144s > tmp = dist(x, "Stiles") 144s > tmp = dist(x, x, "Stiles") 144s > 144s > ## try again (almost) all measures, this time with binary data to check 144s > ## conversions 144s > for (i in proxies) 144s + {cat(i); prtest(i); cat(": OK.\n")} 144s Jaccard: OK. 144s Kulczynski1: OK. 144s Kulczynski2: OK. 144s Mountford: OK. 144s Fager: OK. 144s Russel: OK. 144s simple matching: OK. 144s Hamman: OK. 144s Faith: OK. 144s Tanimoto: OK. 144s Dice: OK. 144s PhiThere were 27 warnings (use warnings() to see them) 144s There were 50 or more warnings (use warnings() to see the first 50) 144s : OK. 144s Michael: OK. 144s Mozley: OK. 144s Yule: OK. 144s Yule2: OK. 144s Ochiai: OK. 144s Simpson: OK. 144s Braun-Blanquet: OK. 144s cosine: OK. 144s angular: OK. 144s eJaccard: OK. 144s eDice: OK. 144s correlation: OK. 144s Chi-squared: OK. 144s Phi-squared: OK. 144s Tschuprow: OK. 144s Cramer: OK. 144s Pearson: OK. 144s Gower: OK. 144s Euclidean: OK. 144s Bhjattacharyya: OK. 144s Manhattan: OK. 144s supremum: OK. 144s Canberra: OK. 144s Wave: OK. 144s divergence: OK. 144s Kullback: OK. 144s Bray: OK. 144s Soergel: OK. 144s Podani: OK. 144s Chord: OK. 144s Geodesic: OK. 144s Whittaker: OK. 144s Hellinger: OK. 144s > ## Minkowski 144s > for (j in c(0.5, 1, 2, 3, Inf)) 144s + {cat("Minkowski: p =", j); prtest("Minkowski", p = j); cat(": OK.\n")} 144s Minkowski: p = 0.5: OK. 144s Minkowski: p = 1: OK. 144s Minkowski: p = 2: OK. 144s Minkowski: p = 3: OK. 144s Minkowski: p = Inf: OK. 144s > 144s > ## Levenshtein distance 144s > s <- c("A", "quick", "brown", "fox", "jumps", "over", "the", "lazy", "dog") 144s > all(as.matrix(dist(s, "Levenshtein")) == dist(s, s, "Levenshtein")) 144s [1] TRUE 144s > 144s > ## Test auto-conversion 144s > x = iris[,-5] 144s > prtest() 144s [1] TRUE 144s > 144s > 144s > 144s BEGIN TEST registry.R 145s 145s R version 4.3.2 (2023-10-31) -- "Eye Holes" 145s Copyright (C) 2023 The R Foundation for Statistical Computing 145s Platform: aarch64-unknown-linux-gnu (64-bit) 145s 145s R is free software and comes with ABSOLUTELY NO WARRANTY. 145s You are welcome to redistribute it under certain conditions. 145s Type 'license()' or 'licence()' for distribution details. 145s 145s R is a collaborative project with many contributors. 145s Type 'contributors()' for more information and 145s 'citation()' on how to cite R or R packages in publications. 145s 145s Type 'demo()' for some demos, 'help()' for on-line help, or 145s 'help.start()' for an HTML browser interface to help. 145s Type 'q()' to quit R. 145s 145s > ########################## 145s > ### registry test instances 145s > 145s > library(proxy) 145s 145s Attaching package: ‘proxy’ 145s 145s The following objects are masked from ‘package:stats’: 145s 145s as.dist, dist 145s 145s The following object is masked from ‘package:base’: 145s 145s as.matrix 145s 145s > 145s > .my_check_fun <- function(x) if (x$Z == 999 && x$New2 == 999) stop("No evil allowed!") 145s > 145s > ## create registry 145s > R <- proxy:::registry(entry_class = "simple.list", 145s + validity_FUN = .my_check_fun) 145s > R 145s An object of class “registry” with no entry. 145s > 145s > ## set fields 145s > R$set_field("X", type = TRUE, is_mandatory = TRUE) 145s > R$set_field("Y", type = "character") 145s > R$set_field("Z", default = 123) 145s > R$get_fields() 145s $names 145s type character 145s default NA 145s is_mandatory TRUE 145s is_modifiable TRUE 145s validity_FUN NULL 145s 145s $X 145s type logical 145s default NA 145s is_mandatory TRUE 145s is_modifiable TRUE 145s validity_FUN NULL 145s 145s $Y 145s type character 145s default NA 145s is_mandatory FALSE 145s is_modifiable TRUE 145s validity_FUN NULL 145s 145s $Z 145s type NA 145s default 123 145s is_mandatory FALSE 145s is_modifiable TRUE 145s validity_FUN NULL 145s 145s > 145s > ## add entries 145s > R$set_entry(names = "test", X = TRUE, Y = "bla") 145s > R$set_entry(names = "test2", X = FALSE, Y = "foo", Z = 99) 145s > R$set_entry(names = "test3", X = FALSE, Y = "bar", Z = "chars") 145s > R$get_entry("test") 145s _ 145s names test 145s X TRUE 145s Y bla 145s Z 123 145s > R[["test2"]] 145s _ 145s names test2 145s X FALSE 145s Y foo 145s Z 99 145s > R[["test3"]] 145s _ 145s names test3 145s X FALSE 145s Y bar 145s Z chars 145s > 145s > ## add new field 145s > R$set_field("New") 145s > R$get_field("New") 145s type NA 145s default NA 145s is_mandatory FALSE 145s is_modifiable TRUE 145s validity_FUN NULL 145s > 145s > ## change entries 145s > R$modify_entry(names = "test", New = 123) 145s > R$modify_entry(names = "test2", New = "test") 145s > 145s > ## field check function (checks for strict positive values) 145s > R$set_field("New2", type = "numeric", validity_FUN = function(x) stopifnot(x > 0)) 145s > R$set_entry(names = "test5", X = TRUE, New2 = 2) 145s > 145s > ## add field with fixed alternatives 145s > R$set_field("New3", type = c("A", "B")) 145s > R$get_field("New") 145s type NA 145s default NA 145s is_mandatory FALSE 145s is_modifiable TRUE 145s validity_FUN NULL 145s > R$set_entry(names = "test6", X = TRUE, New3 = "A") 145s > 145s > ## print/summary = as.data.frame 145s > R 145s An object of class “registry” with 5 entries. 145s > summary(R) 145s X Y Z New New2 New3 145s test TRUE bla 123 123 NA 145s test2 FALSE foo 99 test NA 145s test3 FALSE bar chars NA 145s test5 TRUE 123 2 145s test6 TRUE 123 NA A 145s > 145s > ## seal entries 145s > R$seal_entries() 145s > R$set_field("New4") 145s > R$set_entry(names = "test7", X = TRUE, Y = "bla") 145s > R$delete_entry("test7") 145s > R$modify_entry(names = "test", New4 = "test") 145s > 145s > ## error cases: 145s > TRY <- function(...) stopifnot(inherits(try(..., silent = TRUE), "try-error")) 145s > TRY(R$set_field("bla", type = "character", default = 123)) 145s > TRY(R$set_entry("err1", Y = "bla")) 145s > TRY(R$set_entry("err2", X = "bla")) 145s > TRY(R$set_entry("err3", X = TRUE, New2 = -2)) 145s > TRY(R$set_entry("err4", X = TRUE, Z = 999, New2 = 999)) 145s > TRY(R$set_entry("err5", X = TRUE, New3 = "C")) 145s > TRY(R$modify_entry("Bla", "New", 123)) 145s > TRY(R$modify_entry("X", "Bla", 123)) 145s > TRY(R$modify_entry("test","X",TRUE)) 145s > 145s BEGIN TEST util.R 145s 145s R version 4.3.2 (2023-10-31) -- "Eye Holes" 145s Copyright (C) 2023 The R Foundation for Statistical Computing 145s Platform: aarch64-unknown-linux-gnu (64-bit) 145s 145s R is free software and comes with ABSOLUTELY NO WARRANTY. 145s You are welcome to redistribute it under certain conditions. 145s Type 'license()' or 'licence()' for distribution details. 145s 145s R is a collaborative project with many contributors. 145s Type 'contributors()' for more information and 145s 'citation()' on how to cite R or R packages in publications. 145s 145s Type 'demo()' for some demos, 'help()' for on-line help, or 145s 'help.start()' for an HTML browser interface to help. 145s Type 'q()' to quit R. 145s 145s > 145s > ## test C interfaces 145s > 145s > library(proxy) 145s 145s Attaching package: ‘proxy’ 145s 145s The following objects are masked from ‘package:stats’: 145s 145s as.dist, dist 145s 145s The following object is masked from ‘package:base’: 145s 145s as.matrix 145s 145s > 145s > set.seed(20070630) 145s > 145s > x <- as.dist(matrix(runif(25),5,5)) 145s > x 145s 1 2 3 4 145s 2 0.8390691 145s 3 0.0377036 0.3006153 145s 4 0.7621676 0.9632744 0.4358104 145s 5 0.1211588 0.4522659 0.8005272 0.3062947 145s > attributes(x) 145s $Size 145s [1] 5 145s 145s $call 145s as.dist.default(m = x) 145s 145s $class 145s [1] "dist" 145s 145s $Diag 145s [1] FALSE 145s 145s $Upper 145s [1] FALSE 145s 145s > 145s > z <- .Call(proxy:::R_subset_dist, x, 3) 145s > z 145s dist(0) 145s > 145s > unclass(z) 145s numeric(0) 145s attr(,"Size") 145s [1] 1 145s attr(,"call") 145s as.dist.default(m = x) 145s attr(,"Diag") 145s [1] FALSE 145s attr(,"Upper") 145s [1] FALSE 145s > 145s > .Call(proxy:::R_subset_dist, x, c(1,3,5)) 145s 1 2 145s 2 0.0377036 145s 3 0.1211588 0.8005272 145s > 145s > attr(x, "Labels") <- LETTERS[1:5] 145s > 145s > z <- .Call(proxy:::R_subset_dist, x, c("A","C","E")) 145s > z 145s A C 145s C 0.0377036 145s E 0.1211588 0.8005272 145s > attributes(z) 145s $Size 145s [1] 3 145s 145s $call 145s as.dist.default(m = x) 145s 145s $class 145s [1] "dist" 145s 145s $Diag 145s [1] FALSE 145s 145s $Upper 145s [1] FALSE 145s 145s $Labels 145s [1] "A" "C" "E" 145s 145s > 145s > attr(x, "Labels") <- NULL 145s > 145s > .Call(proxy:::R_rowSums_dist, x, FALSE) 145s [1] 1.760099 2.555225 1.574656 2.467547 1.680247 145s > .Call(proxy:::R_rowSums_dist, z, FALSE) 145s A C E 145s 0.1588624 0.8382308 0.9216860 145s > 145s > .Call(proxy:::R_row_dist, x, FALSE) # row() 145s [1] 2 3 4 5 3 4 5 4 5 5 145s > .Call(proxy:::R_row_dist, x, TRUE) # col() 145s [1] 1 1 1 1 2 2 2 3 3 4 145s > 145s > ## test R interfaces 145s > 145s > dim(x) 145s [1] 5 5 145s > dimnames(x) <- letters[1:5] 145s > dimnames(x) 145s [1] "a" "b" "c" "d" "e" 145s > names(x) <- LETTERS[1:5] 145s > names(x) 145s [1] "A" "B" "C" "D" "E" 145s > 145s > row.dist(x) 145s [1] 2 3 4 5 3 4 5 4 5 5 145s > col.dist(x) 145s [1] 1 1 1 1 2 2 2 3 3 4 145s > 145s > subset(x, c(1,3,5)) 145s A C 145s C 0.0377036 145s E 0.1211588 0.8005272 145s > x[[c(1,3,5)]] 145s A C 145s C 0.0377036 145s E 0.1211588 0.8005272 145s > x[c(1,3,5)] # as usual 145s [1] 0.8390691 0.7621676 0.3006153 145s > 145s > x[[-1]] # drop subscripts 145s B C D 145s C 0.3006153 145s D 0.9632744 0.4358104 145s E 0.4522659 0.8005272 0.3062947 145s > 145s > x[[1]] # empty 145s dist(0) 145s > 145s > ### 145s > 145s autopkgtest [19:39:21]: test run-unit-test: -----------------------] 146s run-unit-test PASS 146s autopkgtest [19:39:22]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 146s autopkgtest [19:39:22]: test pkg-r-autopkgtest: preparing testbed 217s autopkgtest [19:40:33]: testbed dpkg architecture: arm64 217s autopkgtest [19:40:33]: testbed apt version: 2.7.12 217s autopkgtest [19:40:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 218s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 218s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 218s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB] 218s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 219s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 219s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 219s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 219s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 219s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 219s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4013 kB] 219s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 219s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 219s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 220s Fetched 9065 kB in 2s (5336 kB/s) 221s Reading package lists... 223s Reading package lists... 224s Building dependency tree... 224s Reading state information... 224s Calculating upgrade... 225s The following packages will be REMOVED: 225s libglib2.0-0 libssl3 225s The following NEW packages will be installed: 225s libglib2.0-0t64 libssl3t64 xdg-user-dirs 225s The following packages have been kept back: 225s curl 225s The following packages will be upgraded: 225s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 225s ubuntu-minimal ubuntu-standard 225s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 225s Need to get 4613 kB of archives. 225s After this operation, 211 kB of additional disk space will be used. 225s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 225s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 225s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 225s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 225s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 225s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 225s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 225s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 225s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 225s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 226s Fetched 4613 kB in 1s (5941 kB/s) 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 226s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 226s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 226s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 226s udisks2 depends on libglib2.0-0 (>= 2.77.0). 226s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 226s python3-gi depends on libglib2.0-0 (>= 2.77.0). 226s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 226s netplan.io depends on libglib2.0-0 (>= 2.70.0). 226s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 226s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 226s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 226s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 226s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 226s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 226s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 226s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 226s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 226s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 226s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 226s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 226s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 226s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 226s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 226s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 226s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 226s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 226s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 226s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 226s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 226s fwupd depends on libglib2.0-0 (>= 2.79.0). 226s bolt depends on libglib2.0-0 (>= 2.56.0). 226s 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 226s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 226s Selecting previously unselected package libglib2.0-0t64:arm64. 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 227s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 227s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 227s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 227s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 227s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 227s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 227s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 227s wget depends on libssl3 (>= 3.0.0). 227s u-boot-tools depends on libssl3 (>= 3.0.0). 227s tnftp depends on libssl3 (>= 3.0.0). 227s tcpdump depends on libssl3 (>= 3.0.0). 227s systemd-resolved depends on libssl3 (>= 3.0.0). 227s systemd depends on libssl3 (>= 3.0.0). 227s sudo depends on libssl3 (>= 3.0.0). 227s sbsigntool depends on libssl3 (>= 3.0.0). 227s rsync depends on libssl3 (>= 3.0.0). 227s python3-cryptography depends on libssl3 (>= 3.0.0). 227s openssh-server depends on libssl3 (>= 3.0.10). 227s openssh-client depends on libssl3 (>= 3.0.10). 227s mtd-utils depends on libssl3 (>= 3.0.0). 227s mokutil depends on libssl3 (>= 3.0.0). 227s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 227s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 227s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 227s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 227s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 227s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 227s libnvme1 depends on libssl3 (>= 3.0.0). 227s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 227s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 227s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 227s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 227s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 227s kmod depends on libssl3 (>= 3.0.0). 227s dhcpcd-base depends on libssl3 (>= 3.0.0). 227s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 227s 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 227s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 227s Selecting previously unselected package libssl3t64:arm64. 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 227s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 227s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 227s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 227s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 227s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 227s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 227s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 227s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 227s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 227s Unpacking ubuntu-minimal (1.536) over (1.535) ... 227s Selecting previously unselected package xdg-user-dirs. 227s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 227s Unpacking xdg-user-dirs (0.18-1) ... 227s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 227s Unpacking ubuntu-standard (1.536) over (1.535) ... 227s Setting up ubuntu-minimal (1.536) ... 227s Setting up xdg-user-dirs (0.18-1) ... 227s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 227s Setting up libtirpc-common (1.3.4+ds-1.1) ... 227s Setting up ubuntu-standard (1.536) ... 227s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 227s No schema files found: doing nothing. 227s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 227s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 227s Setting up openssl (3.0.13-0ubuntu1) ... 227s Setting up readline-common (8.2-3.1) ... 227s Processing triggers for man-db (2.12.0-3) ... 228s Processing triggers for install-info (7.1-3) ... 228s Processing triggers for libc-bin (2.39-0ubuntu2) ... 229s Reading package lists... 229s Building dependency tree... 229s Reading state information... 229s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 230s sh: Attempting to set up Debian/Ubuntu apt sources automatically 230s sh: Distribution appears to be Ubuntu 231s Reading package lists... 231s Building dependency tree... 231s Reading state information... 232s eatmydata is already the newest version (131-1). 232s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 232s Reading package lists... 232s Building dependency tree... 232s Reading state information... 233s dbus is already the newest version (1.14.10-4ubuntu1). 233s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 233s Reading package lists... 233s Building dependency tree... 233s Reading state information... 234s rng-tools-debian is already the newest version (2.4). 234s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 234s Reading package lists... 234s Building dependency tree... 234s Reading state information... 235s The following packages will be REMOVED: 235s cloud-init* python3-configobj* python3-debconf* 235s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 235s After this operation, 3252 kB disk space will be freed. 235s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 235s Removing cloud-init (24.1.1-0ubuntu1) ... 236s Removing python3-configobj (5.0.8-3) ... 236s Removing python3-debconf (1.5.86) ... 236s Processing triggers for man-db (2.12.0-3) ... 236s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74385 files and directories currently installed.) 236s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 238s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 238s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 238s invoke-rc.d: policy-rc.d denied execution of try-restart. 238s Reading package lists... 238s Building dependency tree... 238s Reading state information... 239s linux-generic is already the newest version (6.8.0-11.11+1). 239s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 240s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 240s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 240s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 242s Reading package lists... 242s Reading package lists... 242s Building dependency tree... 242s Reading state information... 242s Calculating upgrade... 243s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 243s Reading package lists... 243s Building dependency tree... 243s Reading state information... 244s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 244s autopkgtest [19:41:00]: rebooting testbed after setup commands that affected boot 275s Reading package lists... 275s Building dependency tree... 275s Reading state information... 275s Starting pkgProblemResolver with broken count: 0 275s Starting 2 pkgProblemResolver with broken count: 0 275s Done 276s The following additional packages will be installed: 276s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 276s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 276s g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 276s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 276s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 276s libasan8 libatomic1 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev 276s libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 libfontconfig1 276s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 276s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 276s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 276s liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 276s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 276s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 276s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 276s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data 276s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 276s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev 276s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 276s r-cran-proxy rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 276s Suggested packages: 276s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 276s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 276s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 276s liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc 276s libstdc++-13-doc tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib 276s r-base-html texlive-base texlive-latex-base texlive-plain-generic 276s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 276s texlive-latex-recommended texlive-latex-extra texinfo 276s Recommended packages: 276s bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended 276s r-doc-html r-cran-cba libfile-mimeinfo-perl libnet-dbus-perl 276s libx11-protocol-perl x11-utils x11-xserver-utils 276s The following NEW packages will be installed: 276s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 276s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 276s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu 276s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 276s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 276s gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev 276s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 276s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 276s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 276s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 276s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblerc4 276s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 276s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 276s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 276s libpng-dev libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 276s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 276s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 276s linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 276s r-base-dev r-cran-proxy rpcsvc-proto unzip x11-common xdg-utils zip 276s zlib1g-dev 276s 0 upgraded, 107 newly installed, 0 to remove and 0 not upgraded. 276s Need to get 130 MB/130 MB of archives. 276s After this operation, 418 MB of additional disk space will be used. 276s Get:1 /tmp/autopkgtest.dK32Vy/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 276s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 277s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 277s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 277s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 277s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 277s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 277s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 277s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 277s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 277s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 277s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 277s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 277s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 277s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 277s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 277s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 277s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 277s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 277s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 277s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 277s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 277s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 277s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 278s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 278s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 278s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 278s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 278s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 278s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 278s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 278s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 278s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 278s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 278s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 278s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 278s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 278s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 278s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 278s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 278s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 278s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 278s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 279s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 279s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 279s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 279s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 279s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 279s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 279s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 279s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 279s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 279s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 279s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 279s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 279s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 279s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 279s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 279s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 279s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 279s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 279s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 279s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 279s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 279s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 279s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 279s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 279s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 279s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 279s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 279s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 279s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 279s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 279s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 279s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 279s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 279s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 279s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 279s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 279s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 279s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 279s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 279s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 279s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 279s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 279s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 279s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 279s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 279s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 279s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 279s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 279s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 279s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 279s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 279s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 279s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 279s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 279s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 279s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 279s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 279s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 279s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 280s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 281s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 281s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 281s Get:106 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 281s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 282s Preconfiguring packages ... 282s Fetched 130 MB in 5s (26.9 MB/s) 282s Selecting previously unselected package libc-dev-bin. 282s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74330 files and directories currently installed.) 282s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 282s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 282s Selecting previously unselected package linux-libc-dev:arm64. 282s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_arm64.deb ... 282s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 282s Selecting previously unselected package libcrypt-dev:arm64. 282s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 282s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 283s Selecting previously unselected package libtirpc-dev:arm64. 283s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 283s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 283s Selecting previously unselected package libnsl-dev:arm64. 283s Preparing to unpack .../004-libnsl-dev_1.3.0-3_arm64.deb ... 283s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 283s Selecting previously unselected package rpcsvc-proto. 283s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 283s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 283s Selecting previously unselected package libc6-dev:arm64. 283s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_arm64.deb ... 283s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 283s Selecting previously unselected package libisl23:arm64. 283s Preparing to unpack .../007-libisl23_0.26-3_arm64.deb ... 283s Unpacking libisl23:arm64 (0.26-3) ... 283s Selecting previously unselected package libmpc3:arm64. 283s Preparing to unpack .../008-libmpc3_1.3.1-1_arm64.deb ... 283s Unpacking libmpc3:arm64 (1.3.1-1) ... 283s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 283s Preparing to unpack .../009-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 283s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 283s Selecting previously unselected package cpp-13. 283s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 283s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 283s Selecting previously unselected package cpp-aarch64-linux-gnu. 283s Preparing to unpack .../011-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 283s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 283s Selecting previously unselected package cpp. 283s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 283s Unpacking cpp (4:13.2.0-7ubuntu1) ... 283s Selecting previously unselected package libcc1-0:arm64. 283s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 283s Selecting previously unselected package libgomp1:arm64. 283s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 283s Selecting previously unselected package libitm1:arm64. 283s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 283s Selecting previously unselected package libatomic1:arm64. 283s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 283s Selecting previously unselected package libasan8:arm64. 283s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 283s Selecting previously unselected package liblsan0:arm64. 283s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 283s Selecting previously unselected package libtsan2:arm64. 283s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 283s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 284s Selecting previously unselected package libubsan1:arm64. 284s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 284s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 284s Selecting previously unselected package libhwasan0:arm64. 284s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 284s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 284s Selecting previously unselected package libgcc-13-dev:arm64. 284s Preparing to unpack .../022-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 284s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 284s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 284s Preparing to unpack .../023-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 284s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 284s Selecting previously unselected package gcc-13. 284s Preparing to unpack .../024-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 284s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 284s Selecting previously unselected package gcc-aarch64-linux-gnu. 284s Preparing to unpack .../025-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 284s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 284s Selecting previously unselected package gcc. 284s Preparing to unpack .../026-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 284s Unpacking gcc (4:13.2.0-7ubuntu1) ... 284s Selecting previously unselected package libstdc++-13-dev:arm64. 284s Preparing to unpack .../027-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 284s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 284s Selecting previously unselected package g++-13-aarch64-linux-gnu. 284s Preparing to unpack .../028-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 284s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 285s Selecting previously unselected package g++-13. 285s Preparing to unpack .../029-g++-13_13.2.0-17ubuntu2_arm64.deb ... 285s Unpacking g++-13 (13.2.0-17ubuntu2) ... 285s Selecting previously unselected package g++-aarch64-linux-gnu. 285s Preparing to unpack .../030-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 285s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 285s Selecting previously unselected package g++. 285s Preparing to unpack .../031-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 285s Unpacking g++ (4:13.2.0-7ubuntu1) ... 285s Selecting previously unselected package build-essential. 285s Preparing to unpack .../032-build-essential_12.10ubuntu1_arm64.deb ... 285s Unpacking build-essential (12.10ubuntu1) ... 285s Selecting previously unselected package dctrl-tools. 285s Preparing to unpack .../033-dctrl-tools_2.24-3build2_arm64.deb ... 285s Unpacking dctrl-tools (2.24-3build2) ... 285s Selecting previously unselected package fonts-dejavu-mono. 285s Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... 285s Unpacking fonts-dejavu-mono (2.37-8) ... 285s Selecting previously unselected package fonts-dejavu-core. 285s Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... 285s Unpacking fonts-dejavu-core (2.37-8) ... 285s Selecting previously unselected package fontconfig-config. 285s Preparing to unpack .../036-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 285s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 285s Selecting previously unselected package libfontconfig1:arm64. 285s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 285s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 285s Selecting previously unselected package fontconfig. 285s Preparing to unpack .../038-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 285s Unpacking fontconfig (2.15.0-1ubuntu1) ... 285s Selecting previously unselected package libgfortran5:arm64. 285s Preparing to unpack .../039-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 285s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 285s Selecting previously unselected package libgfortran-13-dev:arm64. 285s Preparing to unpack .../040-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 285s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 285s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 285s Preparing to unpack .../041-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 285s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 285s Selecting previously unselected package gfortran-13. 285s Preparing to unpack .../042-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 285s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 285s Selecting previously unselected package gfortran-aarch64-linux-gnu. 285s Preparing to unpack .../043-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 285s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 285s Selecting previously unselected package gfortran. 285s Preparing to unpack .../044-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 285s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 285s Selecting previously unselected package icu-devtools. 285s Preparing to unpack .../045-icu-devtools_74.2-1ubuntu1_arm64.deb ... 285s Unpacking icu-devtools (74.2-1ubuntu1) ... 285s Selecting previously unselected package libblas3:arm64. 285s Preparing to unpack .../046-libblas3_3.12.0-3_arm64.deb ... 285s Unpacking libblas3:arm64 (3.12.0-3) ... 286s Selecting previously unselected package libblas-dev:arm64. 286s Preparing to unpack .../047-libblas-dev_3.12.0-3_arm64.deb ... 286s Unpacking libblas-dev:arm64 (3.12.0-3) ... 286s Selecting previously unselected package libbz2-dev:arm64. 286s Preparing to unpack .../048-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 286s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 286s Selecting previously unselected package libpixman-1-0:arm64. 286s Preparing to unpack .../049-libpixman-1-0_0.42.2-1_arm64.deb ... 286s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 286s Selecting previously unselected package libxcb-render0:arm64. 286s Preparing to unpack .../050-libxcb-render0_1.15-1_arm64.deb ... 286s Unpacking libxcb-render0:arm64 (1.15-1) ... 286s Selecting previously unselected package libxcb-shm0:arm64. 286s Preparing to unpack .../051-libxcb-shm0_1.15-1_arm64.deb ... 286s Unpacking libxcb-shm0:arm64 (1.15-1) ... 286s Selecting previously unselected package libxrender1:arm64. 286s Preparing to unpack .../052-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 286s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 286s Selecting previously unselected package libcairo2:arm64. 286s Preparing to unpack .../053-libcairo2_1.18.0-1_arm64.deb ... 286s Unpacking libcairo2:arm64 (1.18.0-1) ... 286s Selecting previously unselected package libdatrie1:arm64. 286s Preparing to unpack .../054-libdatrie1_0.2.13-3_arm64.deb ... 286s Unpacking libdatrie1:arm64 (0.2.13-3) ... 286s Selecting previously unselected package libdeflate0:arm64. 286s Preparing to unpack .../055-libdeflate0_1.19-1_arm64.deb ... 286s Unpacking libdeflate0:arm64 (1.19-1) ... 286s Selecting previously unselected package libgraphite2-3:arm64. 286s Preparing to unpack .../056-libgraphite2-3_1.3.14-2_arm64.deb ... 286s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 286s Selecting previously unselected package libharfbuzz0b:arm64. 286s Preparing to unpack .../057-libharfbuzz0b_8.3.0-2_arm64.deb ... 286s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 286s Selecting previously unselected package x11-common. 286s Preparing to unpack .../058-x11-common_1%3a7.7+23ubuntu2_all.deb ... 286s Unpacking x11-common (1:7.7+23ubuntu2) ... 286s Selecting previously unselected package libice6:arm64. 286s Preparing to unpack .../059-libice6_2%3a1.0.10-1build2_arm64.deb ... 286s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 286s Selecting previously unselected package libicu-dev:arm64. 286s Preparing to unpack .../060-libicu-dev_74.2-1ubuntu1_arm64.deb ... 286s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 286s Selecting previously unselected package libjpeg-turbo8:arm64. 286s Preparing to unpack .../061-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 286s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 286s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 286s Preparing to unpack .../062-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 286s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 286s Selecting previously unselected package libjpeg8:arm64. 286s Preparing to unpack .../063-libjpeg8_8c-2ubuntu11_arm64.deb ... 286s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 286s Selecting previously unselected package libjpeg8-dev:arm64. 286s Preparing to unpack .../064-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 286s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 287s Selecting previously unselected package libjpeg-dev:arm64. 287s Preparing to unpack .../065-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 287s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 287s Selecting previously unselected package liblapack3:arm64. 287s Preparing to unpack .../066-liblapack3_3.12.0-3_arm64.deb ... 287s Unpacking liblapack3:arm64 (3.12.0-3) ... 287s Selecting previously unselected package liblapack-dev:arm64. 287s Preparing to unpack .../067-liblapack-dev_3.12.0-3_arm64.deb ... 287s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 287s Selecting previously unselected package liblerc4:arm64. 287s Preparing to unpack .../068-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 287s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 287s Selecting previously unselected package libncurses-dev:arm64. 287s Preparing to unpack .../069-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 287s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 287s Selecting previously unselected package libthai-data. 287s Preparing to unpack .../070-libthai-data_0.1.29-2_all.deb ... 287s Unpacking libthai-data (0.1.29-2) ... 287s Selecting previously unselected package libthai0:arm64. 287s Preparing to unpack .../071-libthai0_0.1.29-2_arm64.deb ... 287s Unpacking libthai0:arm64 (0.1.29-2) ... 287s Selecting previously unselected package libpango-1.0-0:arm64. 287s Preparing to unpack .../072-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 287s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 287s Selecting previously unselected package libpangoft2-1.0-0:arm64. 287s Preparing to unpack .../073-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 287s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 287s Selecting previously unselected package libpangocairo-1.0-0:arm64. 287s Preparing to unpack .../074-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 287s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 287s Selecting previously unselected package libpaper1:arm64. 287s Preparing to unpack .../075-libpaper1_1.1.29_arm64.deb ... 287s Unpacking libpaper1:arm64 (1.1.29) ... 287s Selecting previously unselected package libpaper-utils. 287s Preparing to unpack .../076-libpaper-utils_1.1.29_arm64.deb ... 287s Unpacking libpaper-utils (1.1.29) ... 287s Selecting previously unselected package libpcre2-16-0:arm64. 287s Preparing to unpack .../077-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 287s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 287s Selecting previously unselected package libpcre2-32-0:arm64. 287s Preparing to unpack .../078-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 287s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 287s Selecting previously unselected package libpcre2-posix3:arm64. 287s Preparing to unpack .../079-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 287s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 287s Selecting previously unselected package libpcre2-dev:arm64. 287s Preparing to unpack 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libsharpyuv0:arm64 (1.3.2-0.4) ... 288s Selecting previously unselected package libsm6:arm64. 288s Preparing to unpack .../086-libsm6_2%3a1.2.3-1build2_arm64.deb ... 288s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 288s Selecting previously unselected package libtcl8.6:arm64. 288s Preparing to unpack .../087-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 288s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 288s Selecting previously unselected package libjbig0:arm64. 288s Preparing to unpack .../088-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 288s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 288s Selecting previously unselected package libwebp7:arm64. 288s Preparing to unpack .../089-libwebp7_1.3.2-0.4_arm64.deb ... 288s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 288s Selecting previously unselected package libtiff6:arm64. 288s Preparing to unpack .../090-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 288s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 288s Selecting previously unselected package libxft2:arm64. 288s Preparing to unpack .../091-libxft2_2.3.6-1_arm64.deb ... 288s Unpacking libxft2:arm64 (2.3.6-1) ... 288s Selecting previously unselected package libxss1:arm64. 288s Preparing to unpack .../092-libxss1_1%3a1.2.3-1build2_arm64.deb ... 288s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 288s Selecting previously unselected package libtk8.6:arm64. 288s Preparing to unpack .../093-libtk8.6_8.6.13-2_arm64.deb ... 288s Unpacking libtk8.6:arm64 (8.6.13-2) ... 288s Selecting previously unselected package libxt6:arm64. 288s Preparing to unpack .../094-libxt6_1%3a1.2.1-1.1_arm64.deb ... 288s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 288s Selecting previously unselected package pkgconf-bin. 288s Preparing to unpack .../095-pkgconf-bin_1.8.1-2_arm64.deb ... 288s Unpacking pkgconf-bin (1.8.1-2) ... 288s Selecting previously unselected package pkgconf:arm64. 288s Preparing to unpack .../096-pkgconf_1.8.1-2_arm64.deb ... 288s Unpacking pkgconf:arm64 (1.8.1-2) ... 288s Selecting previously unselected package pkg-config:arm64. 288s Preparing to unpack .../097-pkg-config_1.8.1-2_arm64.deb ... 288s Unpacking pkg-config:arm64 (1.8.1-2) ... 288s Selecting previously unselected package zip. 288s Preparing to unpack .../098-zip_3.0-13_arm64.deb ... 288s Unpacking zip (3.0-13) ... 288s Selecting previously unselected package unzip. 288s Preparing to unpack .../099-unzip_6.0-28ubuntu3_arm64.deb ... 288s Unpacking unzip (6.0-28ubuntu3) ... 288s Selecting previously unselected package xdg-utils. 288s Preparing to unpack .../100-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 288s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 288s Selecting previously unselected package r-base-core. 288s Preparing to unpack .../101-r-base-core_4.3.2-1build1_arm64.deb ... 288s Unpacking r-base-core (4.3.2-1build1) ... 289s Selecting previously unselected package liblzma-dev:arm64. 289s Preparing to unpack .../102-liblzma-dev_5.4.5-0.3_arm64.deb ... 289s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 289s Selecting previously unselected package r-base-dev. 289s Preparing to unpack .../103-r-base-dev_4.3.2-1build1_all.deb ... 289s Unpacking r-base-dev (4.3.2-1build1) ... 289s Selecting previously unselected package pkg-r-autopkgtest. 289s Preparing to unpack .../104-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 289s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 289s Selecting previously unselected package r-cran-proxy. 289s Preparing to unpack .../105-r-cran-proxy_0.4-27-1_arm64.deb ... 289s Unpacking r-cran-proxy (0.4-27-1) ... 289s Selecting previously unselected package autopkgtest-satdep. 289s Preparing to unpack .../106-2-autopkgtest-satdep.deb ... 289s Unpacking autopkgtest-satdep (0) ... 289s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 289s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 289s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 289s Setting up libpaper1:arm64 (1.1.29) ... 289s 289s Creating config file /etc/papersize with new version 289s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 289s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 289s Setting up libdatrie1:arm64 (0.2.13-3) ... 289s Setting up libxcb-render0:arm64 (1.15-1) ... 289s Setting up unzip (6.0-28ubuntu3) ... 289s Setting up x11-common (1:7.7+23ubuntu2) ... 290s Setting up libdeflate0:arm64 (1.19-1) ... 290s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 290s Setting up libxcb-shm0:arm64 (1.15-1) ... 290s Setting up libpaper-utils (1.1.29) ... 290s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 290s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 290s Setting up zip (3.0-13) ... 290s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 290s Setting up libblas3:arm64 (3.12.0-3) ... 290s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 290s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 290s Setting up libpkgconf3:arm64 (1.8.1-2) ... 290s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 290s Setting up fonts-dejavu-mono (2.37-8) ... 290s Setting up libmpc3:arm64 (1.3.1-1) ... 290s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 290s Setting up icu-devtools (74.2-1ubuntu1) ... 290s Setting up fonts-dejavu-core (2.37-8) ... 290s Setting up pkgconf-bin (1.8.1-2) ... 290s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 290s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libwebp7:arm64 (1.3.2-0.4) ... 290s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 290s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 290s Setting up libnsl-dev:arm64 (1.3.0-3) ... 290s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 290s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 290s Setting up libthai-data (0.1.29-2) ... 290s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 290s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libisl23:arm64 (0.26-3) ... 290s Setting up libc-dev-bin (2.39-0ubuntu2) ... 290s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 290s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 290s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 290s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libblas-dev:arm64 (3.12.0-3) ... 290s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 290s Setting up dctrl-tools (2.24-3build2) ... 290s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 290s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 290s Setting up libice6:arm64 (2:1.0.10-1build2) ... 290s Setting up liblapack3:arm64 (3.12.0-3) ... 290s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 290s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 290s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 290s Setting up pkgconf:arm64 (1.8.1-2) ... 290s Setting up libthai0:arm64 (0.1.29-2) ... 290s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 290s Setting up liblapack-dev:arm64 (3.12.0-3) ... 290s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 290s Setting up pkg-config:arm64 (1.8.1-2) ... 290s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 290s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 290s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 290s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 290s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 290s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 290s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 290s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 290s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 290s Setting up fontconfig (2.15.0-1ubuntu1) ... 292s Regenerating fonts cache... done. 292s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 292s Setting up libxft2:arm64 (2.3.6-1) ... 292s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 292s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 292s Setting up cpp-13 (13.2.0-17ubuntu2) ... 292s Setting up libtk8.6:arm64 (8.6.13-2) ... 292s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 292s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 292s Setting up libreadline-dev:arm64 (8.2-3) ... 292s Setting up libcairo2:arm64 (1.18.0-1) ... 292s Setting up gcc-13 (13.2.0-17ubuntu2) ... 292s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 292s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 292s Setting up cpp (4:13.2.0-7ubuntu1) ... 292s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 292s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 292s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 292s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 292s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 292s Setting up g++-13 (13.2.0-17ubuntu2) ... 292s Setting up libpng-dev:arm64 (1.6.43-1) ... 292s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 292s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 292s Setting up gcc (4:13.2.0-7ubuntu1) ... 292s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 292s Setting up r-base-core (4.3.2-1build1) ... 292s 292s Creating config file /etc/R/Renviron with new version 292s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 292s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 292s Setting up r-cran-proxy (0.4-27-1) ... 292s Setting up gfortran (4:13.2.0-7ubuntu1) ... 292s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 292s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 292s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 292s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 292s Setting up g++ (4:13.2.0-7ubuntu1) ... 292s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 292s Setting up build-essential (12.10ubuntu1) ... 292s Setting up r-base-dev (4.3.2-1build1) ... 292s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 292s Setting up autopkgtest-satdep (0) ... 292s Processing triggers for man-db (2.12.0-3) ... 294s Processing triggers for install-info (7.1-3) ... 294s Processing triggers for libc-bin (2.39-0ubuntu2) ... 299s (Reading database ... 79927 files and directories currently installed.) 299s Removing autopkgtest-satdep (0) ... 300s autopkgtest [19:41:56]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 300s autopkgtest [19:41:56]: test pkg-r-autopkgtest: [----------------------- 301s Test: Try to load the R library proxy 301s 301s R version 4.3.2 (2023-10-31) -- "Eye Holes" 301s Copyright (C) 2023 The R Foundation for Statistical Computing 301s Platform: aarch64-unknown-linux-gnu (64-bit) 301s 301s R is free software and comes with ABSOLUTELY NO WARRANTY. 301s You are welcome to redistribute it under certain conditions. 301s Type 'license()' or 'licence()' for distribution details. 301s 301s R is a collaborative project with many contributors. 301s Type 'contributors()' for more information and 301s 'citation()' on how to cite R or R packages in publications. 301s 301s Type 'demo()' for some demos, 'help()' for on-line help, or 301s 'help.start()' for an HTML browser interface to help. 301s Type 'q()' to quit R. 301s 301s > library('proxy') 301s 301s Attaching package: ‘proxy’ 301s 301s The following objects are masked from ‘package:stats’: 301s 301s as.dist, dist 301s 301s The following object is masked from ‘package:base’: 301s 301s as.matrix 301s 301s > 301s > 301s Other tests are currently unsupported! 301s They will be progressively added. 302s autopkgtest [19:41:58]: test pkg-r-autopkgtest: -----------------------] 302s pkg-r-autopkgtest PASS 302s autopkgtest [19:41:58]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 302s autopkgtest [19:41:58]: @@@@@@@@@@@@@@@@@@@@ summary 302s run-unit-test PASS 302s pkg-r-autopkgtest PASS 306s Creating nova instance adt-noble-arm64-r-cran-proxy-20240316-193656-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)... 306s Creating nova instance adt-noble-arm64-r-cran-proxy-20240316-193656-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...