0s autopkgtest [19:21:35]: starting date and time: 2024-03-16 19:21:35+0000 0s autopkgtest [19:21:35]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:21:35]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ehuc94nb/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-network --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-21.secgroup --name adt-noble-arm64-r-cran-network-20240316-192135-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 86s autopkgtest [19:23:01]: testbed dpkg architecture: arm64 86s autopkgtest [19:23:01]: testbed apt version: 2.7.12 86s autopkgtest [19:23:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 87s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 87s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB] 88s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 88s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 88s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 88s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 88s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 88s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 88s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 88s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4013 kB] 88s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 88s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 88s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 90s Fetched 9065 kB in 2s (4436 kB/s) 90s Reading package lists... 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 94s Calculating upgrade... 94s The following packages will be REMOVED: 94s libglib2.0-0 libssl3 94s The following NEW packages will be installed: 94s libglib2.0-0t64 libssl3t64 xdg-user-dirs 94s The following packages have been kept back: 94s curl 94s The following packages will be upgraded: 94s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 94s ubuntu-minimal ubuntu-standard 94s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 94s Need to get 4613 kB of archives. 94s After this operation, 211 kB of additional disk space will be used. 94s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 95s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 95s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 95s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 95s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 95s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 95s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 95s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 95s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 95s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 96s Fetched 4613 kB in 1s (4981 kB/s) 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 96s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 96s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 96s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 96s udisks2 depends on libglib2.0-0 (>= 2.77.0). 96s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 96s python3-gi depends on libglib2.0-0 (>= 2.77.0). 96s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 96s netplan.io depends on libglib2.0-0 (>= 2.70.0). 96s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 96s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 96s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 96s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 96s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 96s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 96s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 96s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 96s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 96s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 96s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 96s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 96s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 96s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 96s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 96s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 96s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 96s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 96s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 96s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 96s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 96s fwupd depends on libglib2.0-0 (>= 2.79.0). 96s bolt depends on libglib2.0-0 (>= 2.56.0). 96s 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 96s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 96s Selecting previously unselected package libglib2.0-0t64:arm64. 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 96s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 96s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 96s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 96s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 96s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 96s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 96s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 96s wget depends on libssl3 (>= 3.0.0). 96s u-boot-tools depends on libssl3 (>= 3.0.0). 96s tnftp depends on libssl3 (>= 3.0.0). 96s tcpdump depends on libssl3 (>= 3.0.0). 96s systemd-resolved depends on libssl3 (>= 3.0.0). 96s systemd depends on libssl3 (>= 3.0.0). 96s sudo depends on libssl3 (>= 3.0.0). 96s sbsigntool depends on libssl3 (>= 3.0.0). 96s rsync depends on libssl3 (>= 3.0.0). 96s python3-cryptography depends on libssl3 (>= 3.0.0). 96s openssh-server depends on libssl3 (>= 3.0.10). 96s openssh-client depends on libssl3 (>= 3.0.10). 96s mtd-utils depends on libssl3 (>= 3.0.0). 96s mokutil depends on libssl3 (>= 3.0.0). 96s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 96s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 96s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 96s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 96s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 96s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 96s libnvme1 depends on libssl3 (>= 3.0.0). 96s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 96s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 96s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 96s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 96s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 96s kmod depends on libssl3 (>= 3.0.0). 96s dhcpcd-base depends on libssl3 (>= 3.0.0). 96s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 96s 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 96s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 96s Selecting previously unselected package libssl3t64:arm64. 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 96s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 96s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 96s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 96s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 97s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 97s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 97s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 97s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 97s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 97s Unpacking ubuntu-minimal (1.536) over (1.535) ... 97s Selecting previously unselected package xdg-user-dirs. 97s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 97s Unpacking xdg-user-dirs (0.18-1) ... 97s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 97s Unpacking ubuntu-standard (1.536) over (1.535) ... 97s Setting up ubuntu-minimal (1.536) ... 97s Setting up xdg-user-dirs (0.18-1) ... 97s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 97s Setting up libtirpc-common (1.3.4+ds-1.1) ... 97s Setting up ubuntu-standard (1.536) ... 97s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 97s No schema files found: doing nothing. 97s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 97s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 97s Setting up openssl (3.0.13-0ubuntu1) ... 97s Setting up readline-common (8.2-3.1) ... 97s Processing triggers for man-db (2.12.0-3) ... 98s Processing triggers for install-info (7.1-3) ... 98s Processing triggers for libc-bin (2.39-0ubuntu2) ... 98s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 100s sh: Attempting to set up Debian/Ubuntu apt sources automatically 100s sh: Distribution appears to be Ubuntu 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 102s eatmydata is already the newest version (131-1). 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 103s dbus is already the newest version (1.14.10-4ubuntu1). 103s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 104s rng-tools-debian is already the newest version (2.4). 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s The following packages will be REMOVED: 105s cloud-init* python3-configobj* python3-debconf* 106s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 106s After this operation, 3252 kB disk space will be freed. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 106s Removing cloud-init (24.1.1-0ubuntu1) ... 107s Removing python3-configobj (5.0.8-3) ... 107s Removing python3-debconf (1.5.86) ... 107s Processing triggers for man-db (2.12.0-3) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74385 files and directories currently installed.) 108s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 109s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 109s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 109s invoke-rc.d: policy-rc.d denied execution of try-restart. 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 110s linux-generic is already the newest version (6.8.0-11.11+1). 110s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 110s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 110s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 112s Reading package lists... 112s Reading package lists... 113s Building dependency tree... 113s Reading state information... 113s Calculating upgrade... 113s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 113s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s autopkgtest [19:23:29]: rebooting testbed after setup commands that affected boot 141s autopkgtest [19:23:56]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 144s autopkgtest [19:23:59]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-network 146s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-network 1.18.2-1 (dsc) [2203 B] 146s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-network 1.18.2-1 (tar) [506 kB] 146s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-network 1.18.2-1 (diff) [3456 B] 146s gpgv: Signature made Tue Jan 9 07:08:28 2024 UTC 146s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 146s gpgv: issuer "tille@debian.org" 146s gpgv: Can't check signature: No public key 146s dpkg-source: warning: cannot verify inline signature for ./r-cran-network_1.18.2-1.dsc: no acceptable signature found 147s autopkgtest [19:24:02]: testing package r-cran-network version 1.18.2-1 147s autopkgtest [19:24:02]: build not needed 148s autopkgtest [19:24:03]: test run-unit-test: preparing testbed 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 150s Starting pkgProblemResolver with broken count: 0 150s Starting 2 pkgProblemResolver with broken count: 0 150s Done 150s The following additional packages will be installed: 150s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 150s fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 libdeflate0 150s libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 150s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap liblapack3 liblerc4 150s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 150s libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 150s libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 150s libxss1 libxt6 node-html5shiv r-base-core r-cran-askpass r-cran-brio 150s r-cran-callr r-cran-cli r-cran-coda r-cran-covr r-cran-crayon r-cran-curl 150s r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fansi 150s r-cran-fs r-cran-glue r-cran-httr r-cran-jsonlite r-cran-lattice 150s r-cran-lazyeval r-cran-lifecycle r-cran-magrittr r-cran-mime r-cran-network 150s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload 150s r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rematch2 r-cran-rex 150s r-cran-rlang r-cran-rprojroot r-cran-sna r-cran-statnet.common r-cran-sys 150s r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo 150s r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 150s Suggested packages: 150s tcl8.6 tk8.6 nodejs elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 150s r-cran-spelling r-cran-rstudioapi r-cran-knitr r-cran-rmarkdown r-cran-bit64 150s r-cran-dbi r-cran-dplyr r-cran-formattable r-cran-ggplot2 r-cran-nanotime 150s r-cran-palmerpenguins r-cran-scales r-cran-stringi r-cran-survival 150s r-cran-units r-cran-vdiffr r-cran-hmisc r-cran-roxygen2 r-cran-rvest 150s r-cran-stringr r-cran-rgl r-cran-numderiv r-cran-sparsem r-cran-mass 150s r-cran-matrix r-cran-bench r-cran-blob r-cran-here r-cran-hms 150s r-cran-htmltools r-cran-purrr r-cran-tidyr 150s Recommended packages: 150s r-recommended r-base-dev r-doc-html r-cran-cliapp r-cran-mockery 150s r-cran-htmltools r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown 150s r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise 150s r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils r-cran-gh 150s r-cran-ggplot2 r-cran-unitizer r-cran-dbi r-cran-dplyr r-cran-rsqlite 150s r-cran-jpeg r-cran-png r-cran-readr r-cran-r.rsp r-cran-sf r-cran-lintr 150s r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-cpp11 r-cran-rcpp 150s r-cran-bitops r-cran-mathjaxr r-cran-mockr r-cran-remotes r-cran-codetools 150s r-cran-webfakes r-cran-pingr r-cran-usethis r-cran-shiny r-cran-data.table 150s r-cran-formattable r-cran-bit64 r-cran-generics r-cran-pkgdown 150s r-cran-zeallot r-cran-runit libfile-mimeinfo-perl libnet-dbus-perl 150s libx11-protocol-perl x11-utils x11-xserver-utils 150s The following NEW packages will be installed: 150s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 150s fonts-dejavu-mono fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 150s libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 150s libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 150s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 150s libpaper-utils libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 150s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 150s libxft2 libxrender1 libxss1 libxt6 node-html5shiv r-base-core r-cran-askpass 150s r-cran-brio r-cran-callr r-cran-cli r-cran-coda r-cran-covr r-cran-crayon 150s r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate 150s r-cran-fansi r-cran-fs r-cran-glue r-cran-httr r-cran-jsonlite 150s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-magrittr r-cran-mime 150s r-cran-network r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 150s r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps r-cran-r6 150s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-sna 150s r-cran-statnet.common r-cran-sys r-cran-testthat r-cran-tibble r-cran-utf8 150s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-yaml unzip x11-common 150s xdg-utils zip 150s 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. 150s Need to get 55.5 MB/55.5 MB of archives. 150s After this operation, 108 MB of additional disk space will be used. 150s Get:1 /tmp/autopkgtest.X04CEn/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 150s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 151s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 151s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 151s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 151s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 151s Get:7 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 151s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 151s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 151s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 151s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 151s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 151s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 151s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 151s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 151s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 151s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 151s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 151s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 151s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 151s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 151s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 151s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 151s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 151s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 151s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 151s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 151s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 151s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 151s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 151s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 151s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 151s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 151s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 151s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 151s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 151s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 151s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 151s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 151s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 151s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 151s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 151s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 151s Get:44 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 151s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 151s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 151s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 151s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 152s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 152s Get:50 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 152s Get:51 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 152s Get:52 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 152s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 152s Get:54 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 152s Get:55 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 152s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 152s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 152s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-coda all 0.19-4.1-1 [321 kB] 152s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 152s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 152s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 152s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 152s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 152s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 152s Get:65 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 152s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 152s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 152s Get:68 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 152s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 152s Get:70 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 152s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 152s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 152s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 152s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 152s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 152s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 152s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 152s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 152s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 152s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 152s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 153s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 153s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 153s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 153s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-statnet.common arm64 4.9.0-1 [258 kB] 153s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-network arm64 1.18.2-1 [816 kB] 153s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 153s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 153s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 153s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 153s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 153s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sna arm64 2.7-2-1 [1219 kB] 153s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 153s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 154s Preconfiguring packages ... 154s Fetched 55.5 MB in 2s (22.5 MB/s) 154s Selecting previously unselected package fonts-dejavu-mono. 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74330 files and directories currently installed.) 154s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 154s Unpacking fonts-dejavu-mono (2.37-8) ... 154s Selecting previously unselected package fonts-dejavu-core. 154s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 154s Unpacking fonts-dejavu-core (2.37-8) ... 154s Selecting previously unselected package fontconfig-config. 154s Preparing to unpack .../02-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 154s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 154s Selecting previously unselected package libfontconfig1:arm64. 154s Preparing to unpack .../03-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 154s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 154s Selecting previously unselected package fontconfig. 154s Preparing to unpack .../04-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 154s Unpacking fontconfig (2.15.0-1ubuntu1) ... 154s Selecting previously unselected package fonts-glyphicons-halflings. 154s Preparing to unpack .../05-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 154s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 154s Selecting previously unselected package libblas3:arm64. 154s Preparing to unpack .../06-libblas3_3.12.0-3_arm64.deb ... 154s Unpacking libblas3:arm64 (3.12.0-3) ... 154s Selecting previously unselected package libpixman-1-0:arm64. 154s Preparing to unpack .../07-libpixman-1-0_0.42.2-1_arm64.deb ... 154s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 154s Selecting previously unselected package libxcb-render0:arm64. 154s Preparing to unpack .../08-libxcb-render0_1.15-1_arm64.deb ... 154s Unpacking libxcb-render0:arm64 (1.15-1) ... 154s Selecting previously unselected package libxcb-shm0:arm64. 154s Preparing to unpack .../09-libxcb-shm0_1.15-1_arm64.deb ... 154s Unpacking libxcb-shm0:arm64 (1.15-1) ... 154s Selecting previously unselected package libxrender1:arm64. 155s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 155s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 155s Selecting previously unselected package libcairo2:arm64. 155s Preparing to unpack .../11-libcairo2_1.18.0-1_arm64.deb ... 155s Unpacking libcairo2:arm64 (1.18.0-1) ... 155s Selecting previously unselected package libdatrie1:arm64. 155s Preparing to unpack .../12-libdatrie1_0.2.13-3_arm64.deb ... 155s Unpacking libdatrie1:arm64 (0.2.13-3) ... 155s Selecting previously unselected package libdeflate0:arm64. 155s Preparing to unpack .../13-libdeflate0_1.19-1_arm64.deb ... 155s Unpacking libdeflate0:arm64 (1.19-1) ... 155s Selecting previously unselected package libgfortran5:arm64. 155s Preparing to unpack .../14-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 155s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 155s Selecting previously unselected package libgomp1:arm64. 155s Preparing to unpack .../15-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 155s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 155s Selecting previously unselected package libgraphite2-3:arm64. 155s Preparing to unpack .../16-libgraphite2-3_1.3.14-2_arm64.deb ... 155s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 155s Selecting previously unselected package libharfbuzz0b:arm64. 155s Preparing to unpack .../17-libharfbuzz0b_8.3.0-2_arm64.deb ... 155s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 155s Selecting previously unselected package x11-common. 155s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu2_all.deb ... 155s Unpacking x11-common (1:7.7+23ubuntu2) ... 155s Selecting previously unselected package libice6:arm64. 155s Preparing to unpack .../19-libice6_2%3a1.0.10-1build2_arm64.deb ... 155s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 155s Selecting previously unselected package libjpeg-turbo8:arm64. 155s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 155s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 155s Selecting previously unselected package libjpeg8:arm64. 155s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_arm64.deb ... 155s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 155s Selecting previously unselected package libjs-bootstrap. 155s Preparing to unpack .../22-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 155s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 155s Selecting previously unselected package liblapack3:arm64. 155s Preparing to unpack .../23-liblapack3_3.12.0-3_arm64.deb ... 155s Unpacking liblapack3:arm64 (3.12.0-3) ... 155s Selecting previously unselected package liblerc4:arm64. 155s Preparing to unpack .../24-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 155s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 155s Selecting previously unselected package libthai-data. 155s Preparing to unpack .../25-libthai-data_0.1.29-2_all.deb ... 155s Unpacking libthai-data (0.1.29-2) ... 155s Selecting previously unselected package libthai0:arm64. 155s Preparing to unpack .../26-libthai0_0.1.29-2_arm64.deb ... 155s Unpacking libthai0:arm64 (0.1.29-2) ... 155s Selecting previously unselected package libpango-1.0-0:arm64. 155s Preparing to unpack .../27-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 155s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 155s Selecting previously unselected package libpangoft2-1.0-0:arm64. 155s Preparing to unpack .../28-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 155s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 155s Selecting previously unselected package libpangocairo-1.0-0:arm64. 155s Preparing to unpack .../29-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 155s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 155s Selecting previously unselected package libpaper1:arm64. 155s Preparing to unpack .../30-libpaper1_1.1.29_arm64.deb ... 155s Unpacking libpaper1:arm64 (1.1.29) ... 155s Selecting previously unselected package libpaper-utils. 155s Preparing to unpack .../31-libpaper-utils_1.1.29_arm64.deb ... 155s Unpacking libpaper-utils (1.1.29) ... 155s Selecting previously unselected package libsharpyuv0:arm64. 156s Preparing to unpack .../32-libsharpyuv0_1.3.2-0.4_arm64.deb ... 156s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 156s Selecting previously unselected package libsm6:arm64. 156s Preparing to unpack .../33-libsm6_2%3a1.2.3-1build2_arm64.deb ... 156s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 156s Selecting previously unselected package libtcl8.6:arm64. 156s Preparing to unpack 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156s Selecting previously unselected package libtk8.6:arm64. 156s Preparing to unpack .../40-libtk8.6_8.6.13-2_arm64.deb ... 156s Unpacking libtk8.6:arm64 (8.6.13-2) ... 156s Selecting previously unselected package libxt6:arm64. 156s Preparing to unpack .../41-libxt6_1%3a1.2.1-1.1_arm64.deb ... 156s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 156s Selecting previously unselected package node-html5shiv. 156s Preparing to unpack .../42-node-html5shiv_3.7.3+dfsg-5_all.deb ... 156s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 156s Selecting previously unselected package zip. 156s Preparing to unpack .../43-zip_3.0-13_arm64.deb ... 156s Unpacking zip (3.0-13) ... 156s Selecting previously unselected package unzip. 156s Preparing to unpack .../44-unzip_6.0-28ubuntu3_arm64.deb ... 156s Unpacking unzip (6.0-28ubuntu3) ... 156s Selecting previously unselected package xdg-utils. 156s Preparing to unpack .../45-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 156s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 156s Selecting previously unselected package r-base-core. 156s Preparing to unpack .../46-r-base-core_4.3.2-1build1_arm64.deb ... 156s Unpacking r-base-core (4.3.2-1build1) ... 156s Selecting previously unselected package r-cran-sys. 156s Preparing to unpack .../47-r-cran-sys_3.4.2-1_arm64.deb ... 156s Unpacking r-cran-sys (3.4.2-1) ... 156s Selecting previously unselected package r-cran-askpass. 156s Preparing to unpack .../48-r-cran-askpass_1.2.0-1_arm64.deb ... 156s Unpacking r-cran-askpass (1.2.0-1) ... 156s Selecting previously unselected package r-cran-brio. 156s Preparing to unpack .../49-r-cran-brio_1.1.4-1_arm64.deb ... 156s Unpacking r-cran-brio (1.1.4-1) ... 156s Selecting previously unselected package r-cran-ps. 156s Preparing to unpack .../50-r-cran-ps_1.7.6-1_arm64.deb ... 156s Unpacking r-cran-ps (1.7.6-1) ... 156s Selecting previously unselected package r-cran-r6. 156s Preparing to unpack .../51-r-cran-r6_2.5.1-1_all.deb ... 156s Unpacking r-cran-r6 (2.5.1-1) ... 156s Selecting previously unselected package r-cran-processx. 156s Preparing to unpack .../52-r-cran-processx_3.8.3-1_arm64.deb ... 156s Unpacking r-cran-processx (3.8.3-1) ... 156s Selecting previously unselected package r-cran-callr. 156s Preparing to unpack .../53-r-cran-callr_3.7.3-2_all.deb ... 156s Unpacking r-cran-callr (3.7.3-2) ... 157s Selecting previously unselected package r-cran-cli. 157s Preparing to unpack .../54-r-cran-cli_3.6.2-1_arm64.deb ... 157s Unpacking r-cran-cli (3.6.2-1) ... 157s Selecting previously unselected package r-cran-lattice. 157s Preparing to unpack .../55-r-cran-lattice_0.22-5-1_arm64.deb ... 157s Unpacking r-cran-lattice (0.22-5-1) ... 157s Selecting previously unselected package r-cran-coda. 157s Preparing to unpack .../56-r-cran-coda_0.19-4.1-1_all.deb ... 157s Unpacking r-cran-coda (0.19-4.1-1) ... 157s Selecting previously unselected package r-cran-digest. 157s Preparing to unpack .../57-r-cran-digest_0.6.34-1_arm64.deb ... 157s Unpacking 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r-cran-desc. 157s Preparing to unpack .../69-r-cran-desc_1.4.3-1_all.deb ... 157s Unpacking r-cran-desc (1.4.3-1) ... 157s Selecting previously unselected package r-cran-diffobj. 157s Preparing to unpack .../70-r-cran-diffobj_0.3.5-1_arm64.deb ... 157s Unpacking r-cran-diffobj (0.3.5-1) ... 157s Selecting previously unselected package r-cran-evaluate. 157s Preparing to unpack .../71-r-cran-evaluate_0.23-1_all.deb ... 157s Unpacking r-cran-evaluate (0.23-1) ... 157s Selecting previously unselected package r-cran-fansi. 157s Preparing to unpack .../72-r-cran-fansi_1.0.5-1_arm64.deb ... 157s Unpacking r-cran-fansi (1.0.5-1) ... 157s Selecting previously unselected package r-cran-fs. 157s Preparing to unpack .../73-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 157s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 157s Selecting previously unselected package r-cran-glue. 157s Preparing to unpack .../74-r-cran-glue_1.7.0-1_arm64.deb ... 157s Unpacking r-cran-glue (1.7.0-1) ... 157s Selecting previously unselected package r-cran-rlang. 157s Preparing to unpack .../75-r-cran-rlang_1.1.3-1_arm64.deb ... 157s Unpacking r-cran-rlang (1.1.3-1) ... 158s Selecting previously unselected package r-cran-lifecycle. 158s Preparing to unpack .../76-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 158s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 158s Selecting previously unselected package r-cran-magrittr. 158s Preparing to unpack .../77-r-cran-magrittr_2.0.3-1_arm64.deb ... 158s Unpacking r-cran-magrittr (2.0.3-1) ... 158s Selecting previously unselected package r-cran-utf8. 158s Preparing to unpack .../78-r-cran-utf8_1.2.4-1_arm64.deb ... 158s Unpacking r-cran-utf8 (1.2.4-1) ... 158s Selecting previously unselected package r-cran-vctrs. 158s Preparing to unpack .../79-r-cran-vctrs_0.6.5-1_arm64.deb ... 158s Unpacking r-cran-vctrs (0.6.5-1) ... 158s Selecting previously unselected package r-cran-pillar. 158s Preparing to unpack .../80-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 158s Unpacking r-cran-pillar 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(3.7.3+dfsg-5) ... 159s Setting up libdeflate0:arm64 (1.19-1) ... 159s Setting up libxcb-shm0:arm64 (1.15-1) ... 159s Setting up libpaper-utils (1.1.29) ... 159s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 159s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 159s Setting up zip (3.0-13) ... 159s Setting up libblas3:arm64 (3.12.0-3) ... 159s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 159s Setting up fonts-dejavu-mono (2.37-8) ... 159s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 159s Setting up fonts-dejavu-core (2.37-8) ... 159s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 159s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 159s Setting up libwebp7:arm64 (1.3.2-0.4) ... 159s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 159s Setting up libthai-data (0.1.29-2) ... 159s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 159s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 159s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 159s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 159s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 159s Setting up libice6:arm64 (2:1.0.10-1build2) ... 159s Setting up liblapack3:arm64 (3.12.0-3) ... 159s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 159s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 160s Setting up libthai0:arm64 (0.1.29-2) ... 160s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 160s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 160s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 160s Setting up fontconfig (2.15.0-1ubuntu1) ... 162s Regenerating fonts cache... done. 162s Setting up libxft2:arm64 (2.3.6-1) ... 162s Setting up libtk8.6:arm64 (8.6.13-2) ... 162s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 162s Setting up libcairo2:arm64 (1.18.0-1) ... 162s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 162s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 162s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 162s Setting up r-base-core (4.3.2-1build1) ... 162s 162s Creating config file /etc/R/Renviron with new version 162s Setting up r-cran-crayon (1.5.2-1) ... 162s Setting up r-cran-lattice (0.22-5-1) ... 162s Setting up r-cran-ps (1.7.6-1) ... 162s Setting up r-cran-lazyeval (0.2.2-1build1) ... 162s Setting up r-cran-r6 (2.5.1-1) ... 162s Setting up r-cran-coda (0.19-4.1-1) ... 162s Setting up r-cran-magrittr (2.0.3-1) ... 162s Setting up r-cran-fs (1.6.3+dfsg-1) ... 162s Setting up r-cran-curl (5.2.0+dfsg-1) ... 162s Setting up r-cran-brio (1.1.4-1) ... 162s Setting up r-cran-diffobj (0.3.5-1) ... 162s Setting up r-cran-rlang (1.1.3-1) ... 162s Setting up r-cran-sys (3.4.2-1) ... 162s Setting up r-cran-withr (2.5.0-1) ... 162s Setting up r-cran-processx (3.8.3-1) ... 162s Setting up r-cran-mime (0.12-1) ... 162s Setting up r-cran-praise (1.0.0-4build1) ... 162s Setting up r-cran-digest (0.6.34-1) ... 162s Setting up r-cran-yaml (2.3.8-1) ... 162s Setting up r-cran-evaluate (0.23-1) ... 162s Setting up r-cran-fansi (1.0.5-1) ... 162s Setting up r-cran-glue (1.7.0-1) ... 162s Setting up r-cran-cli (3.6.2-1) ... 162s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 162s Setting up r-cran-rprojroot (2.0.4-1) ... 162s Setting up r-cran-askpass (1.2.0-1) ... 162s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 162s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 162s Setting up r-cran-utf8 (1.2.4-1) ... 162s Setting up r-cran-rex (1.2.1-1) ... 162s Setting up r-cran-statnet.common (4.9.0-1) ... 162s Setting up r-cran-vctrs (0.6.5-1) ... 162s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 162s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 162s Setting up r-cran-callr (3.7.3-2) ... 162s Setting up r-cran-desc (1.4.3-1) ... 162s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 162s Setting up r-cran-network (1.18.2-1) ... 162s Setting up r-cran-sna (2.7-2-1) ... 162s Setting up r-cran-httr (1.4.7+dfsg-1) ... 162s Setting up r-cran-covr (3.6.4+dfsg-1) ... 162s Setting up r-cran-pkgbuild (1.4.3-1) ... 162s Setting up r-cran-pkgload (1.3.4-1) ... 162s Setting up r-cran-rematch2 (2.1.2-2build1) ... 162s Setting up r-cran-waldo (0.5.2-1build1) ... 162s Setting up r-cran-testthat (3.2.1-1) ... 162s Setting up autopkgtest-satdep (0) ... 162s Processing triggers for man-db (2.12.0-3) ... 163s Processing triggers for install-info (7.1-3) ... 163s Processing triggers for libc-bin (2.39-0ubuntu2) ... 169s (Reading database ... 80907 files and directories currently installed.) 169s Removing autopkgtest-satdep (0) ... 170s autopkgtest [19:24:25]: test run-unit-test: [----------------------- 170s BEGIN TEST general.tests.R 170s 170s R version 4.3.2 (2023-10-31) -- "Eye Holes" 170s Copyright (C) 2023 The R Foundation for Statistical Computing 170s Platform: aarch64-unknown-linux-gnu (64-bit) 170s 170s R is free software and comes with ABSOLUTELY NO WARRANTY. 170s You are welcome to redistribute it under certain conditions. 170s Type 'license()' or 'licence()' for distribution details. 170s 170s R is a collaborative project with many contributors. 170s Type 'contributors()' for more information and 170s 'citation()' on how to cite R or R packages in publications. 170s 170s Type 'demo()' for some demos, 'help()' for on-line help, or 170s 'help.start()' for an HTML browser interface to help. 170s Type 'q()' to quit R. 170s 170s > #The following battery of tests is intended to verify the functionality of 170s > #the network library 170s > 170s > #Set to TRUE to run tests 170s > if(FALSE){ 170s + 170s + library(network) 170s + 170s + # ----- check assigning multiple attribute values in a single call ------ 170s + test<-network.initialize(3) 170s + set.vertex.attribute(test,c('a','b'),c(1,2)) 170s + if(!all(test%v%'a'==c(1,1,1) & test%v%'b'==c(2,2,2))){ 170s + stop('setting multiple attribute values with set.vertex.attribute failed') 170s + } 170s + 170s + test<-network.initialize(3) 170s + set.vertex.attribute(test,list('a','b'),c(1,2)) 170s + if(!all(test%v%'a'==c(1,1,1) & test%v%'b'==c(2,2,2))){ 170s + stop('setting multiple attribute values with set.vertex.attribute failed') 170s + } 170s + 170s + test<-network.initialize(3) 170s + set.vertex.attribute(test,c('a','b'),list(c(1,2,3),c(4,5,6))) 170s + if(!all(test%v%'a'==c(1,2,3) & test%v%'b'==c(4,5,6))){ 170s + stop('setting multiple attribute values with set.vertex.attribute failed') 170s + } 170s + 170s + test<-network.initialize(3) 170s + set.vertex.attribute(test,c('a','b'),list(list(1,2,3),list(4,5,6))) 170s + if(!all(test%v%'a'==c(1,2,3) & test%v%'b'==c(4,5,6))){ 170s + stop('setting multiple attribute values with set.vertex.attribute failed') 170s + } 170s + 170s + test<-network.initialize(3) 170s + obj<-list(one='a complex object',two=c('with muliple','parts')) 170s + set.vertex.attribute(test,c('a','b'),list(list(as.list(obj)),list(as.list(obj)))) 170s + if(!all(all.equal(get.vertex.attribute(test,'a',unlist=FALSE)[[1]],obj) & all.equal(get.vertex.attribute(test,'b',unlist=FALSE)[[1]],obj))){ 170s + stop('setting multiple attribute values with list values in set.vertex.attribute failed') 170s + } 170s + 171s + # check assignment to list of networks 171s + net <- network.initialize(2) 171s + netlist <- list(net) 171s + set.network.attribute(netlist[[1]],"test","a value") 171s + if (!"test" %in% list.network.attributes(netlist[[1]])) 171s + stop('assignment to list of networks failed') 171s + 171s + # test multiple assignment for network 171s + 171s + test<-network.initialize(3) 171s + set.network.attribute(test,c("a","b"),1:2) 171s + if (!all(test%n%'a'==1,test%n%'b'==2)){ 171s + stop('mulltiple attribute assignment failed for set.network.attribute') 171s + } 171s + 171s + test<-network.initialize(3) 171s + set.network.attribute(test,list("a","b"),as.list(1:2)) 171s + if (!all(test%n%'a'==1,test%n%'b'==2)){ 171s + stop('mulltiple attribute assignment failed for set.network.attribute') 171s + } 171s + 171s + 171s + 171s + # test multiple assignment for edges 171s + 171s + test<-network.initialize(3) 171s + add.edges(test,tail=1:3,head=c(2,3,1)) 171s + net<-test 171s + set.edge.attribute(net,c("a","b"),1:2) 171s + if (!all(net%n%'a'==1,net%n%'b'==2)){ 171s + stop('mulltiple attribute assignment failed for set.edge.attribute') 171s + } 171s + 171s + net<-test 171s + set.edge.attribute(net,c('a','b'),list(c(1,2,3),c(4,5,6))) 171s + if(!all(net%e%'a'==c(1,2,3) & net%e%'b'==c(4,5,6))){ 171s + stop('setting multiple attribute values with set.edge.attribute failed') 171s + } 171s + 171s + net<-test 171s + set.edge.attribute(net,c('a','b'),list(list(1,2,3),list(4,5,6))) 171s + if(!all(net%e%'a'==c(1,2,3) & net%e%'b'==c(4,5,6))){ 171s + stop('setting multiple attribute values with set.edge.attribute failed') 171s + } 171s + 171s + net<-test 171s + obj<-list(one='a complex object',two=c('with muliple','parts')) 171s + set.edge.attribute(net,c('a','b'),list(list(as.list(obj)),list(as.list(obj)))) 171s + if(!all(all.equal(get.edge.attribute(net,'a',unlist=FALSE)[[1]],obj) & all.equal(get.edge.attribute(net,'b',unlist=FALSE)[[1]],obj))){ 171s + stop('setting multiple attribute values with list values in set.edge.attribute failed') 171s + } 171s + 171s + 171s + 171s + # ---- checks for get.edge.attribute overloading and omit args ---- 171s + net<-network.initialize(3) 171s + add.edges(net,c(1,2,3),c(2,3,1)) 171s + set.edge.attribute(net,'test',"a") 171s + if(!all(get.edge.attribute(net,'test')==c("a","a","a"))){stop("overloading of get.edge.attribute to get.edge.value not working correctly ")} 171s + 171s + # check list output of get.edge.attribute with deleted.edges.omit 171s + delete.edges(net,2) 171s + set.edge.attribute(net,'foo','bar',1) 171s + if(!identical(list('bar',NULL,NULL),get.edge.attribute(net,'foo',unlist=FALSE, deleted.edges.omit = FALSE))){ 171s + stop("deleted.edges.omit argument causing bad return values in get.edge.attribute ") 171s + } 171s + if(!identical(list('bar',NULL),get.edge.attribute(net,'foo',unlist=FALSE, deleted.edges.omit = TRUE))){ 171s + stop("deleted.edges.omit argument causing bad return values in get.edge.attribute ") 171s + } 171s + 171s + # check unlisted output of get.edge.attribute with na.omit and deleted.edges.omit 171s + if(!identical(c('bar'),get.edge.attribute(net,'foo',unlist=TRUE,deleted.edges.omit=TRUE))){ 171s + stop("omission argument causing bad return values in get.edge.attribute") 171s + } 171s + if(!identical(c('bar'),get.edge.attribute(net,'foo',unlist=TRUE,deleted.edges.omit=TRUE))){ 171s + stop("omission arguments causing bad return values in get.edge.attribute") 171s + } 171s + 171s + # check for null.na recoding of non-set attributes 171s + if(!identical(c('bar'),get.edge.attribute(net,'foo',unlist=TRUE,null.na=FALSE))){ 171s + stop("null.na arguments causing bad return values in get.edge.attribute") 171s + } 171s + if(!identical(c('bar',NA),get.edge.attribute(net,'foo',unlist=TRUE,null.na=TRUE))){ 171s + stop("null.na arguments causing bad return values in get.edge.attribute") 171s + } 171s + if(!identical(list('bar',NULL,NULL),get.edge.attribute(net,'foo',unlist=FALSE,null.na=FALSE))){ 171s + stop("null.na arguments causing bad return values in get.edge.attribute") 171s + } 171s + if(!identical(list('bar',NULL,NA),get.edge.attribute(net,'foo',unlist=FALSE,null.na=TRUE))){ 171s + stop("null.na arguments causing bad return values in get.edge.attribute") 171s + } 171s + 171s + 171s + 171s + #mark an edge as missing to test na.omit 171s + set.edge.attribute(net,'na',TRUE,e=1) 171s + 171s + # check that values corresponding to missing edges are ommited 171s + if(!identical(list('bar',NULL,NULL),get.edge.attribute(net,'foo',unlist=FALSE,na.omit=FALSE))){ 171s + stop("na.omit argument causing bad return values in get.edge.attribute") 171s + } 171s + if(!identical(list(NULL,NULL),get.edge.attribute(net,'foo',unlist=FALSE,na.omit=TRUE))){ 171s + stop("na.omit argument causing bad return values in get.edge.attribute") 171s + } 171s + 171s + if(!identical(c('bar'),get.edge.attribute(net,'foo',unlist=TRUE,na.omit=FALSE))){ 171s + stop("na.omit argument causing bad return values in get.edge.attribute") 171s + } 171s + if(!identical(NULL,get.edge.attribute(net,'foo',unlist=TRUE,na.omit=TRUE))){ 171s + stop("na.omit argument causing bad return values in get.edge.attribute") 171s + } 171s + # check for behavior when querying the 'na' attribute 171s + if(!identical(c(TRUE,FALSE),get.edge.attribute(net,'na',na.omit=FALSE))){ 171s + stop("get.edge.attribute did not return correct values for 'na' attribute with na.omit=FALSE") 171s + } 171s + if(!identical(c(FALSE),get.edge.attribute(net,'na',na.omit=TRUE))){ 171s + stop("get.edge.attribute did not return correct values for 'na' attribute with na.omit=TRUE") 171s + } 171s + 171s + # check behavior on a network with no edges 171s + if(!identical(list(),get.edge.attribute(network.initialize(3),'foo',unlist=FALSE))){ 171s + stop("get.edge.attribute did not return correct values network with no edges") 171s + } 171s + 171s + if(!identical(NULL,get.edge.attribute(network.initialize(3),'foo',unlist=TRUE))){ 171s + stop("get.edge.attribute did not return correct values network with no edges") 171s + } 171s + 171s + if(!identical(NULL,get.edge.attribute(net,'bar'))){ 171s + stop("get.edge.attribute did not return correct values for attribute that does not exist") 171s + } 171s + 171s + 171s + # check for behavior of attribute values explicitly set to null 171s + net<-network.initialize(3) 171s + net[1,2]<-1 171s + net[1,3]<-1 171s + set.edge.attribute(net,'nullval',list(NULL)) 171s + 171s + # expect NULL,NULL 171s + if(!identical(list(NULL,NULL),get.edge.attribute(net,'nullval',unlist=FALSE,null.na=FALSE))){ 171s + stop("get.edge.attribute not returning NULL values stored as edge attribute correctly") 171s + } 171s + 171s + # expect that this should return NULL values, which will dissappear on unlisting 171s + # do NOT want to see NA,NA 171s + if(!identical(NULL,get.edge.attribute(net,'nullval',null.na=FALSE))){ 171s + stop("get.edge.attribute not returning NULL values stored as edge attribute correctly") 171s + } 171s + if(!identical(NULL,get.edge.attribute(net,'nullval',null.na=TRUE))){ 171s + stop("get.edge.attribute not returning NULL values stored as edge attribute correctly") 171s + } 171s + 171s + #End tests 171s + } 171s > 171s BEGIN TEST general.tests2.R 171s 171s R version 4.3.2 (2023-10-31) -- "Eye Holes" 171s Copyright (C) 2023 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu (64-bit) 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 171s > #Set to TRUE to run tests 171s > if(FALSE){ 171s + 171s + # additional tests of misc network functionality split off from general.tests.R to avoid speed warnings 171s + library(network) 171s + 171s + # ----- check memory saftey with a big assignment --- 171s + net<-network.initialize(100000) 171s + net<-add.edges(net,1:99999,2:100000) 171s + set.edge.attribute(net,'LETTERS',LETTERS) 171s + 171s + # --- tests for get.induced.subgraph additions -- 171s + data(emon) 171s + # extract the network of responders in MtStHelens network with interaction Frequency of 4 171s + subG4<-get.inducedSubgraph(emon$MtStHelens,eid=which(emon$MtStHelens%e%'Frequency'==4)) 171s + if(network.size(subG4)!=24){ 171s + stop('wrong size eid induced subgraph') 171s + } 171s + 171s + if (any(subG4%e%'Frequency'!=4)){ 171s + stop('bad edges in eid induced subgraph') 171s + } 171s + 171s + # checks for error conditions 171s + # can't specify eid with v or alter 171s + # get.inducedSubgraph(v=1:2,emon$MtStHelens,eid=which(emon$MtStHelens%e%'Frequency'==4)) 171s + # get.inducedSubgraph(alter=1:2,emon$MtStHelens,eid=which(emon$MtStHelens%e%'Frequency'==4)) 171s + # get.inducedSubgraph(emon$MtStHelens,eid=200:300) 171s + 171s + 171s + # ---- tests for specific bugs/edgecases ----- 171s + 171s + # ticket #180 (used to throw error if no edges exist) 171s + set.edge.attribute(network.initialize(3),"test","a") 171s + 171s + # check for network of zero size --used to give error ticket #255 171s + set.vertex.attribute(network.initialize(0),'foo','bar') 171s + 171s + 171s + # check for is.na.network problems #619 171s + x2<-network.initialize(3) 171s + x2[1,2]<-NA 171s + if(is.na.network(x2)[1,2]!=1){ 171s + stop('problem iwth is.na.netowrk') 171s + } 171s + 171s + # check for na problems in which.matrix.type #926 171s + mat <- matrix(rbinom(200, 1, 0.2), nrow = 20) 171s + naIndices <- sample(1:200, 20) 171s + mat[naIndices] <- NA 171s + nw <- network(mat) 171s + 171s + # ---- check for undirected loops getID cases #327 #609 ----- 171s + net<-network.initialize(2,loops=TRUE,directed=FALSE) 171s + net[1,1]<-1 171s + net[1,2]<-1 171s + net[2,2]<-1 171s + if(get.edgeIDs(net,v=1,alter=1)!=1){ 171s + stop("problem with get.edgeIDs on undirected network with loops") 171s + } 171s + if(get.edgeIDs(net,v=2,alter=2)!=3){ 171s + stop("problem with get.edgeIDs on undirected network with loops") 171s + } 171s + 171s + net<-network.initialize(2,loops=TRUE,directed=FALSE) 171s + net[1,2]<-1 171s + if(length(get.edgeIDs(net,v=2,alter=2))>0){ 171s + stop("problem with get.edgeIDs on undirected network with loops") 171s + } 171s + 171s + # check for problem with as.network.edgelist with zero edges #1138 171s + result1 <- as.matrix.network.edgelist(network.initialize(5),as.sna.edgelist = TRUE) 171s + if (nrow(result1) != 0){ 171s + stop('as.matrix.network.edgelist did not return correct value for net with zero edges') 171s + } 171s + result1a <- tibble::as_tibble(network.initialize(5)) 171s + if (nrow(result1a) != 0){ 171s + stop('as_tibble.network did not return correct value for net with zero edges') 171s + } 171s + result2<-as.matrix.network.adjacency(network.initialize(5)) 171s + if(nrow(result2) != 5 & ncol(result2) != 5){ 171s + stop('as.matrix.network.adjacency did not return matrix with correct dimensions') 171s + } 171s + result3<-as.matrix.network.adjacency(network.initialize(0)) 171s + if(nrow(result3) != 0 & ncol(result3) != 0){ 171s + stop('as.matrix.network.adjacency did not return matrix with correct dimensions') 171s + } 171s + result4<-as.matrix.network.incidence(network.initialize(5)) 171s + if(nrow(result4) != 5 & ncol(result4) != 0){ 171s + stop('as.matrix.network.incidence did not return matrix with correct dimensions') 171s + } 171s + result5<-as.matrix.network.incidence(network.initialize(0)) 171s + if(nrow(result5) != 0 & ncol(result5) != 0){ 171s + stop('as.matrix.network.incidence did not return matrix with correct dimensions') 171s + } 171s + 171s + #End test 171s + } 171s > 171s BEGIN TEST list.attribute.tests.R 171s 171s R version 4.3.2 (2023-10-31) -- "Eye Holes" 171s Copyright (C) 2023 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu (64-bit) 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 171s > #Set to TRUE to run tests 171s > if(FALSE){ 171s + 171s + require(network) 171s + 171s + # --------- test list.vertex.attributes --- 171s + 171s + net<-network.initialize(3) 171s + 171s + list.vertex.attributes(net) 171s + 171s + if(!all(list.vertex.attributes(net)==c('na','vertex.names'))){ 171s + stop('list.vertex.attribute did not report default attributes corrrectly') 171s + } 171s + 171s + set.vertex.attribute(net,'letters',c("a","b","c")) 171s + 171s + if(!all(list.vertex.attributes(net)==c('letters','na','vertex.names'))){ 171s + stop('list.vertex.attribute did not report added attributes corrrectly') 171s + } 171s + 171s + 171s + # ----- test list.edge.attributes ---- 171s + 171s + net<-network.initialize(3) 171s + if(length(list.edge.attributes(net))!=0){ 171s + stop("list.edge.attributes did not return empty list for network with no edges") 171s + } 171s + 171s + add.edges(net,1,2) 171s + add.edges(net,2,3) 171s + if(list.edge.attributes(net)!='na'){ 171s + stop("list.edge.attributes did not return 'na' for network with only edges") 171s + } 171s + 171s + set.edge.attribute(net,'letter',c("a","b")) 171s + if(!all(list.edge.attributes(net)==c('letter','na'))){ 171s + stop("list.edge.attributes did not return attribute names for network with edges") 171s + } 171s + 171s + delete.edges(net,eid=1) 171s + if(!all(list.edge.attributes(net)==c('letter','na'))){ 171s + stop("list.edge.attributes did not return attribute names for network deleted edge") 171s + } 171s + 171s + # ---- test list.network.attributes ---- 171s + net<-network.initialize(3) 171s + if(!all(list.network.attributes(net)==c("bipartite", "directed", "hyper","loops","mnext", "multiple","n" ))){ 171s + stop("list.network.attributes returned unexpected values for default attributes of a network") 171s + } 171s + 171s + set.network.attribute(net,'letter',"a") 171s + if(!all(list.network.attributes(net)==c("bipartite", "directed", "hyper","letter","loops","mnext", "multiple","n" ))){ 171s + stop("list.network.attributes returned unexpected values for network with attribute added") 171s + } 171s + 171s + # ----- tests for printing function for edges cases ------ 171s + net<-network.initialize(100) 171s + net%n%'a_matrix'<-matrix(1:100,nrow=10,ncol=10) 171s + net%n%'a_null'<-NULL 171s + net%n%'a_list'<-list(part1=list(c("A","B")),part2=list("c")) 171s + net%n%'a_desc_vec'<-numeric(rep(100,1)) 171s + net%n%'a_net'<-network.initialize(5) 171s + print.network(net) 171s + 171s + #End tests 171s + } 171s > 171s BEGIN TEST network.access.test.R 171s 171s R version 4.3.2 (2023-10-31) -- "Eye Holes" 171s Copyright (C) 2023 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu (64-bit) 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 171s > #Set to TRUE to run tests 171s > if(FALSE){ 171s + 171s + library(network) 171s + 171s + binet = network.initialize(10, bipartite = 6) 171s + set.vertex.attribute(binet, 'myval', paste('b1', 1:6), v=1:6) 171s + set.vertex.attribute(binet, 'myval', paste('b2', 1:4), v=7:10) 171s + 171s + check <- vector() 171s + check[1] <- all(get.vertex.attribute(binet, 'myval') == c("b1 1", "b1 2", "b1 3", "b1 4", "b1 5", "b1 6", "b2 1", "b2 2", "b2 3" ,"b2 4")) 171s + 171s + # check for distinction between bipartite=FALSE and bipartite=0 171s + testA<-network.initialize(3,bipartite=0) 171s + if(!is.bipartite(testA)){ 171s + stop('failed test of is.bipartite for bipartite=0') 171s + } 171s + 171s + testB<-network.initialize(3,bipartite=FALSE) 171s + if(is.bipartite(testB)){ 171s + stop('failed test of is.bipartite for bipartite=FALSE') 171s + } 171s + 171s + testC<-network.initialize(3,bipartite=TRUE) 171s + if(!is.bipartite(testC)){ 171s + stop('failed test of is.bipartite for bipartite=TRUE') 171s + } 171s + 171s + if(!is.bipartite(binet)){ 171s + stop('failed test of is.bipartite for bipartite=6') 171s + } 171s + 171s + # add vertices to bipartite graphs 171s + g = binet; add.vertices(g, 5, last.mode=F) 171s + check[2] <- network.size(g) == 15 171s + check[3] <- get.network.attribute(g, 'bipartite') == 11 171s + check[4] <- identical(get.vertex.attribute(g, 'myval'), 171s + c("b1 1", "b1 2", "b1 3", "b1 4", "b1 5", "b1 6", NA,NA,NA,NA,NA,"b2 1","b2 2","b2 3","b2 4")) 171s + 171s + test<-network.initialize(3,bipartite=0) 171s + test%v%'letters'<-LETTERS[1:3] 171s + add.vertices(test,nv=1,last.mode=FALSE) 171s + if(!identical(test%v%'letters',c(NA,"A","B","C"))){ 171s + stop("Error adding vertices to first mode of network with biparite=0") 171s + } 171s + 171s + test<-network.initialize(3,bipartite=0) 171s + test%v%'letters'<-LETTERS[1:3] 171s + add.vertices(test,nv=1,last.mode=TRUE) 171s + if(!identical(test%v%'letters',c("A","B","C",NA))){ 171s + stop("Error adding vertices to last mode of network with biparite=0") 171s + } 171s + 171s + 171s + g = binet 171s + add.vertices(g, 5, last.mode=T) 171s + check[5] <- network.size(g) == 15 171s + check[6] <- get.network.attribute(g, 'bipartite') == 6 171s + check[7] <- identical(get.vertex.attribute(g, 'myval'), 171s + c("b1 1", "b1 2", "b1 3", "b1 4", "b1 5", "b1 6","b2 1","b2 2","b2 3","b2 4", NA,NA,NA,NA,NA)) 171s + 171s + # replacement operators should always replace 171s + y <- network.initialize(4,dir=FALSE) # This network can have at most 1 edge. 171s + y[1,2] <- NA # Assign NA to (1,2) 171s + y[1,2] <- NA 171s + check[8] <- network.edgecount(y) == 0 171s + check[9] <- network.edgecount(y, na.omit=F) == 1 171s + 171s + y[,] <- 1 171s + check[10] <- network.edgecount(y) == 6 171s + y[,] <- NA 171s + check[11] <- network.edgecount(y) == 0 171s + check[12] <- network.edgecount(y, na.omit=F) == 6 171s + y[,] <- 0 171s + check[13] <- network.edgecount(y, na.omit=F) == 0 171s + 171s + 171s + # ------ test valid.eids function 171s + net<-network.initialize(4) 171s + net[,]<-1 171s + delete.edges(net,eid=4:6) 171s + if(!all(valid.eids(net)==c(1,2,3,7,8,9,10,11,12))){ 171s + stop('valid.eids did not return correct ids for non-null elements of network') 171s + } 171s + 171s + #If everything worked, check is TRUE 171s + if(!all(check)){ #Should be TRUE 171s + stop(paste("network package test failed on test(s):",which(!check))) 171s + } 171s + 171s + #End tests 171s + } 171s > 171s BEGIN TEST network.battery.R 171s 171s R version 4.3.2 (2023-10-31) -- "Eye Holes" 171s Copyright (C) 2023 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu (64-bit) 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 171s > #The following battery of tests is intended to verify the functionality of 171s > #the network library 171s > 171s > #Set to TRUE to run tests 171s > if(FALSE){ 171s + 171s + library(network) 171s + #These functions are intended to mimic functionality from the sna package. 171s + #Said package is not required to use network, but was used in creating this 171s + #battery of tests. 171s + rgraph<-function(n){ 171s + m<-matrix(rbinom(n*n,1,0.5),n,n) 171s + diag(m)<-0 171s + m 171s + } 171s + degree<-function(d,cmode = "freeman") 171s + { 171s + n <- dim(d)[1] 171s + diag(d) <- NA 171s + switch(cmode, indegree = apply(d, 2, sum, na.rm = TRUE), 171s + outdegree = apply(d, 1, sum, na.rm = TRUE), freeman = apply(d, 171s + 2, sum, na.rm = TRUE) + apply(d, 1, sum, na.rm = TRUE)) 171s + } 171s + #gctorture(TRUE) #Uncomment to perform a more intensive (SLOW) test 171s + 171s + # ---- Check assignment, deletion, and adjacency for dyadic graphs ---- 171s + check<-vector() 171s + temp<-network(matrix(0,5,5)) 171s + temp[1,2]<-1 #Add edge 171s + check[1]<-temp[1,2]==1 #Check adjacency 171s + check[2]<-get.network.attribute(temp,"mnext")==2 #Check count 171s + temp[1,2]<-1 #Should have no effect 171s + check[3]<-get.network.attribute(temp,"mnext")==2 #Check count 171s + temp[1,1]<-1 #Should have no effect 171s + check[4]<-temp[1,1]==0 #Shouldn't be present 171s + check[5]<-get.network.attribute(temp,"mnext")==2 #Check count 171s + temp[,2]<-1 #Should add 3 edges 171s + check[6]<-get.network.attribute(temp,"mnext")==5 #Check count 171s + check[7]<-all(temp[,2]==c(1,0,1,1,1)) #Verify row 171s + temp[3:4,3:4]<-1 #Should add 2 edges 171s + check[8]<-get.network.attribute(temp,"mnext")==7 #Check count 171s + temp[,]<-0 #Delete edges 171s + check[9]<-all(temp[,]==matrix(0,5,5)) #Verify that edges were removed 171s + temp[1:2,3:5]<-1 #Add new edges 171s + check[10]<-sum(temp[,])==6 #Check edge sum 171s + temp<-add.vertices(temp,3) #Add vertices 171s + check[11]<-network.size(temp)==8 171s + check[12]<-sum(temp[,])==6 #Edges should still be there 171s + check[13]<-all(temp[,5]==c(1,1,0,0,0,0,0,0)) 171s + temp[8,]<-1 #Add edges to new vertex 171s + check[14]<-all(temp[8,]==c(1,1,1,1,1,1,1,0)) #Verify 171s + temp<-delete.vertices(temp,c(7,8)) #Remove vertices 171s + check[15]<-network.size(temp)==6 #Verify removal 171s + check[16]<-sum(temp[,])==6 #Check edge sum 171s + check[17]<-!any(c(7,8)%in%c(sapply(temp$mel,"[[","inl"),sapply(temp$mel,"[[","outl"))) #Make sure they're really gone! 171s + temp<-network(matrix(0,5,5),directed=FALSE,loops=TRUE) #Create undir graph 171s + check[18]<-is.directed(temp)==FALSE #Some simple gal tests 171s + check[19]<-has.loops(temp)==TRUE 171s + temp[1,]<-1 171s + check[20]<-all(temp[,1]==temp[1,]) #Verify edges 171s + temp<-permute.vertexIDs(temp,5:1) #Permute 171s + check[21]<-all(temp[1,]==c(0,0,0,0,1)) #Verify permutation 171s + check[22]<-all(temp[,5]==rep(1,5)) 171s + check[23]<-all(get.neighborhood(temp,1)%in%c(5,1)) #Check neighborhoods 171s + check[24]<-all(sort(get.neighborhood(temp,5))==1:5) 171s + check[25]<-length(get.edges(temp,5))==5 #Check get.edges 171s + check[26]<-length(get.edges(temp,5,2))==1 171s + g<-rgraph(10) 171s + temp<-network(g) 171s + check[27]<-all(g==temp[,]) #Yet more edge checkage 171s + check[28]<-all(g[3:1,-(4:3)]==temp[3:1,-(4:3)]) 171s + temp[,,,names.eval="newval"]<-matrix(1:100,10,10) #Edge value assignment 171s + check[29]<-all(as.sociomatrix(temp,"newval")==matrix(1:100,10,10)*g) 171s + check[30]<-all(apply(as.matrix.network.incidence(temp),1,sum)==(degree(g,cmode="indegree")-degree(g,cmode="outdegree"))) #Check incidence matrix 171s + check[31]<-all(dim(as.matrix.network.incidence(temp))==c(10,sum(g))) 171s + check[32]<-all(apply(as.matrix.network.incidence(temp,"newval"),1,sum)==(degree(matrix(1:100,10,10)*g,cmode="indegree")-degree(matrix(1:100,10,10)*g,cmode="outdegree"))) 171s + check[33]<-all(as.matrix.network.edgelist(temp,"newval")==cbind(row(g)[g>0],col(g)[g>0],matrix(1:100,10,10)[g>0])) 171s + temp[1:3,1:5,names.eval="newval"]<-matrix(1:15,3,5) 171s + check[34]<-all(as.sociomatrix(temp,"newval")[1:3,1:5]==g[1:3,1:5]*matrix(1:15,3,5)) 171s + temp[,,"na"]<-TRUE #Verify NA filtering 171s + check[35]<-sum(temp[,,na.omit=TRUE])==0 171s + check[36]<-sum(is.na(temp[,,na.omit=FALSE]))==sum(g) 171s + 171s + #---- Check assignment, deletion, and adjacency for hypergraphs ---- 171s + temp<-network.initialize(10,directed=F,hyper=T,loops=T) 171s + check[37]<-sum(temp[,])==0 171s + temp<-add.edge(temp,1:4,1:4,"value",list(5)) 171s + temp<-add.edge(temp,3:5,3:5,"value",list(6)) 171s + temp<-add.edge(temp,4:7,4:7,"value",list(7)) 171s + temp<-add.edge(temp,6:10,6:10,"value",list(8)) 171s + check[38]<-all(as.matrix.network.incidence(temp)==cbind(c(1,1,1,1,0,0,0,0,0,0),c(0,0,1,1,1,0,0,0,0,0),c(0,0,0,1,1,1,1,0,0,0),c(0,0,0,0,0,1,1,1,1,1))) 171s + check[39]<-all(as.matrix.network.incidence(temp,"value")==cbind(5*c(1,1,1,1,0,0,0,0,0,0),6*c(0,0,1,1,1,0,0,0,0,0),7*c(0,0,0,1,1,1,1,0,0,0),8*c(0,0,0,0,0,1,1,1,1,1))) 171s + check[40]<-all(temp[,]==((as.matrix.network.incidence(temp)%*%t(as.matrix.network.incidence(temp)))>0)) 171s + 171s + #---- Check coercion and construction methods ---- 171s + g<-rgraph(10) 171s + temp<-network(g) 171s + check[41]<-all(temp[,]==g) 171s + temp<-as.network(g*matrix(1:100,10,10),names.eval="value",ignore.eval=FALSE) 171s + check[42]<-all(as.sociomatrix(temp,"value")==g*matrix(1:100,10,10)) 171s + temp<-as.network.matrix(as.matrix.network.edgelist(temp,"value"),matrix.type="edgelist",names.eval="value",ignore.eval=FALSE) 171s + check[43]<-all(as.sociomatrix(temp,"value")==g*matrix(1:100,10,10)) 171s + temp<-as.network.matrix(as.matrix.network.incidence(temp,"value"),matrix.type="incidence",names.eval="value",ignore.eval=FALSE) 171s + check[44]<-all(as.sociomatrix(temp,"value")==g*matrix(1:100,10,10)) 171s + 171s + # check functioning of na.rm argument #922 171s + plain<-as.network.matrix(matrix(c(0,1,NA,NA),ncol=2),na.rm=TRUE) 171s + if (network.naedgecount(plain) != 0){ 171s + stop('problem with na values in adjacency matrix coericon') 171s + } 171s + plain<-as.network.matrix(matrix(c(0,1,NA,NA),ncol=2),na.rm=FALSE) 171s + if (network.naedgecount(plain) != 1){ 171s + stop('problem with na values in adjacnecy matrix coericon') 171s + } 171s + 171s + 171s + 171s + # test for as.matrix.network edgelist bug #935 171s + x <- network.initialize(10) 171s + add.edge(x,1,2) 171s + add.edge(x,2,3) 171s + set.edge.attribute(x,'foo','bar',e=2) # i.e. the edge from 2 to 3 171s + if (!identical(as.matrix.network.edgelist(x,'foo'),structure(c("1", "2", "2", "3", NA, "bar"), .Dim = 2:3, n = 10, vnames = 1:10))){ 171s + stop("problem with as.matrix.network.edgelist with attribute and deleted edge") 171s + } 171s + 171s + 171s + 171s + #---- Check attribute assignment/access ---- 171s + g<-rgraph(10) 171s + temp<-network(g) 171s + temp<-set.vertex.attribute(temp,"value",1:10) 171s + check[45]<-all(get.vertex.attribute(temp,"value")==1:10) 171s + temp<-delete.vertex.attribute(temp,"value") 171s + check[46]<-all(is.na(get.vertex.attribute(temp,"value"))) 171s + temp<-set.vertex.attribute(temp,"value",1:5,c(2,4,6,8,10)) 171s + check[47]<-all(get.vertex.attribute(temp,"value")[c(2,4,6,8,10)]==1:5) 171s + temp<-set.network.attribute(temp,"value","pork!") 171s + check[48]<-get.network.attribute(temp,"value")=="pork!" 171s + temp<-delete.network.attribute(temp,"value") 171s + check[49]<-is.null(get.network.attribute(temp,"value")) 171s + temp<-set.edge.attribute(temp,"value",5) 171s + check[50]<-all(get.edge.attribute(temp$mel,"value")==5) 171s + temp<-delete.edge.attribute(temp,"value") 171s + check[51]<-all(is.null(get.edge.attribute(temp$mel,"value"))) 171s + temp<-set.edge.value(temp,"value",g*matrix(1:100,10,10)) 171s + check[52]<-all(get.edge.value(temp,"value")==(g*matrix(1:100,10,10))[g>0]) 171s + check[53]<-all(as.sociomatrix(temp,"value")==(g*matrix(1:100,10,10))) 171s + 171s + 171s + #---- Check additional operators ---- 171s + g<-rgraph(10) 171s + temp<-network(g,names.eval="value",ignore.eval=FALSE) 171s + temp2<-network(g*2,names.eval="value",ignore.eval=FALSE) 171s + check[54]<-all(g==as.sociomatrix(temp+temp2)) 171s + check[55]<-all(g*3==as.sociomatrix(sum(temp,temp2,attrname="value"),"value")) 171s + check[56]<-all(g==as.sociomatrix(temp*temp2)) 171s + check[57]<-all(g*2==as.sociomatrix(prod(temp,temp2,attrname="value"),"value")) 171s + check[58]<-all(0==as.sociomatrix(temp-temp2)) 171s + check[59]<-all(-g==as.sociomatrix(sum(temp,-as.sociomatrix(temp2,"value"),attrname="value"),"value")) 171s + check[60]<-all(((g%*%g)>0)==as.sociomatrix("%c%.network"(temp,temp2))) 171s + check[61]<-all(((g%*%g)>0)==as.sociomatrix(temp%c%temp2)) 171s + check[62]<-all(((!temp)[,]==!g)[diag(10)<1]) 171s + check[63]<-all((temp|temp2)[,]==g) 171s + check[64]<-all((temp&temp2)[,]==g) 171s + temp%v%"value"<-1:10 171s + check[65]<-all(temp%v%"value"==1:10) 171s + temp%n%"value"<-"pork!" 171s + check[66]<-temp%n%"value"=="pork!" 171s + 171s + # ---- Check to ensure that in-place modification is not producing side effects ---- 171s + g<-network.initialize(5); checkg<-g; add.vertices(g,3) 171s + check[67]<-(network.size(checkg)==5)&&(network.size(g)==8) 171s + g<-network.initialize(5); checkg<-g; delete.vertices(g,2) 171s + check[68]<-(network.size(checkg)==5)&&(network.size(g)==4) 171s + g<-network.initialize(5); checkg<-g; add.edge(g,2,3) 171s + check[69]<-(sum(checkg[,])==0)&&(sum(g[,])==1) 171s + g<-network.initialize(5); checkg<-g; add.edges(g,c(2,2,2),c(1,3,4)) 171s + check[70]<-(sum(checkg[,])==0)&&(sum(g[,])==3) 171s + g<-network.initialize(5); checkg<-g; g%v%"boo"<-1:5 171s + check[71]<-all(is.na(checkg%v%"boo"))&&all(g%v%"boo"==1:5) 171s + g<-network.initialize(5); checkg<-g; g%n%"boo"<-1:5 171s + check[72]<-is.null(checkg%n%"boo")&&all(g%n%"boo"==1:5) 171s + g<-network.initialize(5); g[1,]<-1; checkg<-g; g%e%"boo"<-col(matrix(0,5,5)) 171s + check[73]<-is.null(checkg%e%"boo")&&all(g%e%"boo"==2:5) 171s + g<-network.initialize(5); checkg<-g; permute.vertexIDs(g,5:1) 171s + check[74]<-all(checkg%v%"vertex.names"==1:5)&&all(g%v%"vertex.names"==5:1) 171s + g<-network.initialize(5); temp<-(function(){add.vertices(g,3); network.size(g)})() 171s + check[75]<-(network.size(g)==5)&&(temp==8) 171s + g<-network.initialize(5); (function(){g<-network.initialize(4); add.vertices(g,3)})() 171s + check[76]<-(network.size(g)==5) 171s + 171s + # check for operators with undirected edge error ticket #279 171s + # nw1 is assigned tailhead 171s + nw2<-network.initialize(3,directed=FALSE) 171s + nw2[2,1]<-1 171s + 171s + # Which, the binary network operators don't take into account: 171s + check[77]<-network.edgecount(nw1-nw2)==0 # Should have 0, has 1. 171s + check[78]<-network.edgecount(nw1|nw2)==1 # Should have 1, has 2 (1->2 and 2->1). 171s + check[79]<-network.edgecount(nw1&nw2)==1 # Should have 1, has 0 (since it treats 1->2 and 2->1 differently). 171s + check[80]<-network.edgecount(!nw1)==2 # Should have choose(3,2)-1=2, has 3. 171s + check[81]<-network.edgecount(!nw2)==2 # Should have choose(3,2)-1=2, has 2. 171s + 171s + #If everything worked, check is TRUE 171s + if(!all(check)){ #Should be TRUE 171s + stop(paste("network package test failed on test(s):",which(!check))) 171s + } 171s + 171s + #End test 171s + } 171s > 171s BEGIN TEST pathological.tests.R 171s 171s R version 4.3.2 (2023-10-31) -- "Eye Holes" 171s Copyright (C) 2023 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu (64-bit) 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 171s > #Set to TRUE to run tests 171s > if(FALSE){ 171s + 171s + library(network) 171s + if (require(statnet.common,quietly=TRUE)){ 171s + 171s + opttest({ 171s + gctorture(TRUE) 171s + n <- 10 171s + test <- network.initialize(n) 171s + for (i in 1:(n-1)){ 171s + for (j in (i+1):n){ 171s + cat(i,j,'\n') 171s + get.inducedSubgraph(test,v=i:j) 171s + } 171s + } 171s + gctorture(FALSE) 171s + },'Ticket #180 Test 1','NETWORK_pathology_TESTS') 171s + 171s + opttest({ 171s + gctorture(TRUE) 171s + test <- network.initialize(10) 171s + delete.vertices(test,5) 171s + gctorture(FALSE) 171s + },'Ticket #180 Test 2','NETWORK_pathology_TESTS') 171s + 171s + opttest({ 171s + x <- network.initialize(10) 171s + x[,] <- 1 171s + try(set.edge.value(x,'foo',matrix('bar',5,5))) 171s + },'Ticket #827','NETWORK_pathology_TESTS') 171s + 171s + } 171s + 171s + #End tests 171s + } 171s > 171s BEGIN TEST plotflo.R 171s 171s R version 4.3.2 (2023-10-31) -- "Eye Holes" 171s Copyright (C) 2023 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu (64-bit) 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 172s > #Set to TRUE to run tests 172s > if(FALSE){ 172s + 172s + # 172s + # load the library 172s + # 172s + library(network) 172s + # 172s + # attach the sociomatrix for the Florentine marriage data 172s + # This is not yet a graph object. 172s + # 172s + data(flo) 172s + # 172s + # print out the sociomatrix for the Florentine marriage data 172s + # 172s + flo 172s + # 172s + # Create a network object out of the adjacency matrix and print it out 172s + # 172s + nflo <- network(flo,directed=FALSE) 172s + nflo 172s + # 172s + # print out the sociomatrix for the Florentine marriage data 172s + # 172s + print(nflo,matrix.type="adjacency") 172s + # 172s + # plot the Florentine marriage data 172s + # 172s + plot(nflo) 172s + # 172s + # create a vector indicating the Medici family and add it as a covariate to the 172s + # graph object. 172s + # 172s + nflo <- set.vertex.attribute(nflo,"medici",c(0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0)) 172s + nflo 172s + # 172s + # create a vector indicating the Medici family for the graph 172s + # 172s + medici <- rep("",nrow(flo)) 172s + names(medici) <- dimnames(flo)[[1]] 172s + medici[names(medici)=="Medici"] <- "Medici" 172s + # 172s + # plot the marriage data, highlighting the Medici family 172s + # 172s + plot(nflo,vertex.col=1+get.vertex.attribute(nflo,"medici")) 172s + 172s + # plot the emon St. Helens network, with edge widths proportional 172s + # to 'Frequency', and edges labeled by their id 172s + data(emon) 172s + par(mar=c(0,0,0,0)) 172s + plot(emon[[5]],edge.label=TRUE,edge.label.cex=0.6, 172s + edge.col='gray',edge.lwd=(emon[[5]]%e%'Frequency')*2) 172s + 172s + #End tests 172s + } 172s > 172s BEGIN TEST speedTests.R 172s 172s R version 4.3.2 (2023-10-31) -- "Eye Holes" 172s Copyright (C) 2023 The R Foundation for Statistical Computing 172s Platform: aarch64-unknown-linux-gnu (64-bit) 172s 172s R is free software and comes with ABSOLUTELY NO WARRANTY. 172s You are welcome to redistribute it under certain conditions. 172s Type 'license()' or 'licence()' for distribution details. 172s 172s R is a collaborative project with many contributors. 172s Type 'contributors()' for more information and 172s 'citation()' on how to cite R or R packages in publications. 172s 172s Type 'demo()' for some demos, 'help()' for on-line help, or 172s 'help.start()' for an HTML browser interface to help. 172s Type 'q()' to quit R. 172s 172s > #Set to TRUE to run tests 172s > if(FALSE){ 172s + 172s + # some really basic speed checks to help us know if we make changes that massively degrade performance 172s + require(network) 172s + 172s + init<-system.time(net<-network.initialize(100000))[3] 172s + setv<-system.time(set.vertex.attribute(net,"foo","bar"))[3] 172s + getv<-system.time(get.vertex.attribute(net,"foo"))[3] 172s + listv<-system.time(list.vertex.attributes(net))[3] 172s + adde<-system.time(add.edges(net,tail=1:99999,head=2:100000))[3] 172s + sete<-system.time(set.edge.attribute(net,"foo","bar"))[3] 172s + gete<-system.time(get.edge.attribute(net,"foo"))[3] 172s + liste<-system.time(list.edge.attributes(net))[3] 172s + addmoree<-system.time(add.edge(net,100000,1))[3] 172s + addmorev<-system.time(add.vertices(net,1))[3] 172s + 172s + 172s + # optionally compare to benchmarks saved in test folder to see if things have changed 172s + # benchmarks<-rbind(init,setv,getv,listv,adde,sete,gete,liste,addmoree,addmorev) 172s + # oldmarks<-read.table(file.choose(),header=TRUE,colClasses=c('character','numeric')) 172s + # all.equal(oldmarks[,1],benchmarks[,1],check.attributes=FALSE) 172s + 172s + # optionally save out benchmarks to test directory 172s + # write.table(benchmarks,file=file.choose()) 172s + 172s + # some absolute thresholds 172s + 172s + if(init>5){ 172s + stop("initializing network for large number of vertices took much longer than expected") 172s + } 172s + 172s + if(setv>5){ 172s + stop("set.vertex.attribute for large number of vertices took much longer than expected") 172s + } 172s + 172s + if(getv>5){ 172s + stop("get.vertex.attribute for large number of vertices took much longer than expected") 172s + } 172s + 172s + if(listv>1){ 172s + stop("list.vertex.attributes for large number of vertices took much longer than expected") 172s + } 172s + 172s + if(adde>5){ 172s + stop("add.edges for a large number of edges took much longer than expected") 172s + } 172s + 172s + if(sete>10){ 172s + stop("set.edge.attribute for a large number of edges took much longer than expected") 172s + } 172s + 172s + if(gete>1){ 172s + stop("get.edge.attribute for a large number of edges took much longer than expected") 172s + } 172s + 172s + if(liste>1){ 172s + stop("list.edge.attribute for a large number of edges took much longer than expected") 172s + } 172s + 172s + if(addmoree>5){ 172s + stop("add.edge for a network with a large number of edges took much longer than expected") 172s + } 172s + 172s + if(addmorev>5){ 172s + stop("add.vertices for a network with large number of vertices took longer than expected") 172s + } 172s + 172s + #End tests 172s + } 172s > 172s BEGIN TEST testthat.R 172s 172s R version 4.3.2 (2023-10-31) -- "Eye Holes" 172s Copyright (C) 2023 The R Foundation for Statistical Computing 172s Platform: aarch64-unknown-linux-gnu (64-bit) 172s 172s R is free software and comes with ABSOLUTELY NO WARRANTY. 172s You are welcome to redistribute it under certain conditions. 172s Type 'license()' or 'licence()' for distribution details. 172s 172s R is a collaborative project with many contributors. 172s Type 'contributors()' for more information and 172s 'citation()' on how to cite R or R packages in publications. 172s 172s Type 'demo()' for some demos, 'help()' for on-line help, or 172s 'help.start()' for an HTML browser interface to help. 172s Type 'q()' to quit R. 172s 172s > library(testthat) 172s > library(network) 172s 172s ‘network’ 1.18.2 (2023-12-04), part of the Statnet Project 172s * ‘news(package="network")’ for changes since last version 172s * ‘citation("network")’ for citation information 172s * ‘https://statnet.org’ for help, support, and other information 172s 172s > 172s > test_check("network") 176s [ FAIL 0 | WARN 1 | SKIP 0 | PASS 249 ] 176s 176s [ FAIL 0 | WARN 1 | SKIP 0 | PASS 249 ] 176s > 176s BEGIN TEST vignette.R 177s 177s R version 4.3.2 (2023-10-31) -- "Eye Holes" 177s Copyright (C) 2023 The R Foundation for Statistical Computing 177s Platform: aarch64-unknown-linux-gnu (64-bit) 177s 177s R is free software and comes with ABSOLUTELY NO WARRANTY. 177s You are welcome to redistribute it under certain conditions. 177s Type 'license()' or 'licence()' for distribution details. 177s 177s R is a collaborative project with many contributors. 177s Type 'contributors()' for more information and 177s 'citation()' on how to cite R or R packages in publications. 177s 177s Type 'demo()' for some demos, 'help()' for on-line help, or 177s 'help.start()' for an HTML browser interface to help. 177s Type 'q()' to quit R. 177s 177s > require("network") 177s Loading required package: network 177s 177s ‘network’ 1.18.2 (2023-12-04), part of the Statnet Project 177s * ‘news(package="network")’ for changes since last version 177s * ‘citation("network")’ for citation information 177s * ‘https://statnet.org’ for help, support, and other information 177s 177s > set.seed(1702) 177s > 177s > results = NULL 177s > 177s > data("flo") 177s > data("emon") 177s > 177s > net <- network.initialize(5) 177s > net 177s Network attributes: 177s vertices = 5 177s directed = TRUE 177s hyper = FALSE 177s loops = FALSE 177s multiple = FALSE 177s bipartite = FALSE 177s total edges= 0 177s missing edges= 0 177s non-missing edges= 0 177s 177s Vertex attribute names: 177s vertex.names 177s 177s No edge attributes 177s > 177s > nmat <- matrix(rbinom(25, 1, 0.5), nr = 5, nc = 5) 177s > net <- network(nmat, loops = TRUE) 177s > net 177s Network attributes: 177s vertices = 5 177s directed = TRUE 177s hyper = FALSE 177s loops = TRUE 177s multiple = FALSE 177s bipartite = FALSE 177s total edges= 9 177s missing edges= 0 177s non-missing edges= 9 177s 177s Vertex attribute names: 177s vertex.names 177s 177s No edge attributes 177s > 177s > summary(net) 177s Network attributes: 177s vertices = 5 177s directed = TRUE 177s hyper = FALSE 177s loops = TRUE 177s multiple = FALSE 177s bipartite = FALSE 177s total edges = 9 177s missing edges = 0 177s non-missing edges = 9 177s density = 0.36 177s 177s Vertex attributes: 177s vertex.names: 177s character valued attribute 177s 5 valid vertex names 177s 177s No edge attributes 177s 177s Network adjacency matrix: 177s 1 2 3 4 5 177s 1 1 0 1 0 1 177s 2 1 0 0 1 0 177s 3 1 0 1 1 0 177s 4 0 0 1 0 0 177s 5 0 0 0 0 0 177s > results[1] = all(nmat == net[,]) 177s > 177s > net <- as.network(nmat, loops = TRUE) 177s > results[2] = all(nmat == net[,]) 177s > 177s > nflo <- network(flo, directed = FALSE) 177s > nflo 177s Network attributes: 177s vertices = 16 177s directed = FALSE 177s hyper = FALSE 177s loops = FALSE 177s multiple = FALSE 177s bipartite = FALSE 177s total edges= 20 177s missing edges= 0 177s non-missing edges= 20 177s 177s Vertex attribute names: 177s vertex.names 177s 177s No edge attributes 177s > 177s > results[3] = all(nflo[9,] == c(1, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 1)) 177s > results[4] = nflo[9,1] == 1 177s > results[5] = nflo[9,4] == 0 177s > results[6] = is.adjacent(nflo, 9, 1) == TRUE 177s > results[7] = is.adjacent(nflo, 9, 4) == FALSE 177s > 177s > results[8] = network.size(nflo) == 16 177s > results[9] = network.edgecount(nflo) == 20 177s > results[10] = network.density(nflo) == 1/6 177s > results[11] = has.loops(nflo) == FALSE 177s > results[12] = is.bipartite(nflo) == FALSE 177s > results[13] = is.directed(nflo) == FALSE 177s > results[14] = is.hyper(nflo) == FALSE 177s > results[15] = is.multiplex(nflo) == FALSE 177s > 177s > as.sociomatrix(nflo) 177s Acciaiuoli Albizzi Barbadori Bischeri Castellani Ginori Guadagni 177s Acciaiuoli 0 0 0 0 0 0 0 177s Albizzi 0 0 0 0 0 1 1 177s Barbadori 0 0 0 0 1 0 0 177s Bischeri 0 0 0 0 0 0 1 177s Castellani 0 0 1 0 0 0 0 177s Ginori 0 1 0 0 0 0 0 177s Guadagni 0 1 0 1 0 0 0 177s Lamberteschi 0 0 0 0 0 0 1 177s Medici 1 1 1 0 0 0 0 177s Pazzi 0 0 0 0 0 0 0 177s Peruzzi 0 0 0 1 1 0 0 177s Pucci 0 0 0 0 0 0 0 177s Ridolfi 0 0 0 0 0 0 0 177s Salviati 0 0 0 0 0 0 0 177s Strozzi 0 0 0 1 1 0 0 177s Tornabuoni 0 0 0 0 0 0 1 177s Lamberteschi Medici Pazzi Peruzzi Pucci Ridolfi Salviati Strozzi 177s Acciaiuoli 0 1 0 0 0 0 0 0 177s Albizzi 0 1 0 0 0 0 0 0 177s Barbadori 0 1 0 0 0 0 0 0 177s Bischeri 0 0 0 1 0 0 0 1 177s Castellani 0 0 0 1 0 0 0 1 177s Ginori 0 0 0 0 0 0 0 0 177s Guadagni 1 0 0 0 0 0 0 0 177s Lamberteschi 0 0 0 0 0 0 0 0 177s Medici 0 0 0 0 0 1 1 0 177s Pazzi 0 0 0 0 0 0 1 0 177s Peruzzi 0 0 0 0 0 0 0 1 177s Pucci 0 0 0 0 0 0 0 0 177s Ridolfi 0 1 0 0 0 0 0 1 177s Salviati 0 1 1 0 0 0 0 0 177s Strozzi 0 0 0 1 0 1 0 0 177s Tornabuoni 0 1 0 0 0 1 0 0 177s Tornabuoni 177s Acciaiuoli 0 177s Albizzi 0 177s Barbadori 0 177s Bischeri 0 177s Castellani 0 177s Ginori 0 177s Guadagni 1 177s Lamberteschi 0 177s Medici 1 177s Pazzi 0 177s Peruzzi 0 177s Pucci 0 177s Ridolfi 1 177s Salviati 0 177s Strozzi 0 177s Tornabuoni 0 177s > 177s > results[16] = all(nflo[,] == as.sociomatrix(nflo)) 177s > results[17] = all(as.matrix(nflo) == as.sociomatrix(nflo)) 177s > as.matrix(nflo,matrix.type = "edgelist") 177s [,1] [,2] 177s [1,] 9 1 177s [2,] 6 2 177s [3,] 7 2 177s [4,] 9 2 177s [5,] 5 3 177s [6,] 9 3 177s [7,] 7 4 177s [8,] 11 4 177s [9,] 15 4 177s [10,] 11 5 177s [11,] 15 5 177s [12,] 8 7 177s [13,] 16 7 177s [14,] 13 9 177s [15,] 14 9 177s [16,] 16 9 177s [17,] 14 10 177s [18,] 15 11 177s [19,] 15 13 177s [20,] 16 13 177s attr(,"n") 177s [1] 16 177s attr(,"vnames") 177s [1] "Acciaiuoli" "Albizzi" "Barbadori" "Bischeri" "Castellani" 177s [6] "Ginori" "Guadagni" "Lamberteschi" "Medici" "Pazzi" 177s [11] "Peruzzi" "Pucci" "Ridolfi" "Salviati" "Strozzi" 177s [16] "Tornabuoni" 177s > 177s > net <- network.initialize(5, loops = TRUE) 177s > net[nmat>0] <- 1 177s > results[18] = all(nmat == net[,]) 177s > 177s > net[,] <- 0 177s > net[,] <- nmat 177s > results[19] = all(nmat == net[,]) 177s > 177s > net[,] <- 0 177s > for(i in 1:5) 177s + for(j in 1:5) 177s + if(nmat[i,j]) 177s + net[i,j] <- 1 177s > results[20] = all(nmat == net[,]) 177s > 177s > net[,] <- 0 177s > add.edges(net, row(nmat)[nmat>0], col(nmat)[nmat>0]) 177s > results[21] = all(nmat == net[,]) 177s > 177s > net[,] <- as.numeric(nmat[,]) 177s > results[22] = all(nmat == net[,]) 177s > 177s > net <- network.initialize(5) 177s > add.edge(net, 2, 3) 177s > net[,] 177s 1 2 3 4 5 177s 1 0 0 0 0 0 177s 2 0 0 1 0 0 177s 3 0 0 0 0 0 177s 4 0 0 0 0 0 177s 5 0 0 0 0 0 177s > results[23] = net[2,3] == 1 177s > 177s > add.edges(net, c(3, 5), c(4, 4)) 177s > net[,] 177s 1 2 3 4 5 177s 1 0 0 0 0 0 177s 2 0 0 1 0 0 177s 3 0 0 0 1 0 177s 4 0 0 0 0 0 177s 5 0 0 0 1 0 177s > results[24] = (net[3,4] == 1 && net[5,4] == 1) 177s > 177s > net[,2] <- 1 177s > net[,] 177s 1 2 3 4 5 177s 1 0 1 0 0 0 177s 2 0 0 1 0 0 177s 3 0 1 0 1 0 177s 4 0 1 0 0 0 177s 5 0 1 0 1 0 177s > results[25] = net[2,2] == 0 177s > 177s > delete.vertices(net, 4) 177s > results[26] = all(net[,] == matrix(c(0,1,0,0,0,0,1,0,0,1,0,0,0,1,0,0), byrow=T, nrow=4)) 177s > 177s > add.vertices(net, 2) 177s > net[,] 177s 1 2 3 5 177s 1 0 1 0 0 0 0 177s 2 0 0 1 0 0 0 177s 3 0 1 0 0 0 0 177s 5 0 1 0 0 0 0 177s 0 0 0 0 0 0 177s 0 0 0 0 0 0 177s > 177s > get.edges(net, 1) 177s [[1]] 177s [[1]]$inl 177s [1] 2 177s 177s [[1]]$outl 177s [1] 1 177s 177s [[1]]$atl 177s [[1]]$atl$na 177s [1] FALSE 177s 177s 177s 177s > get.edges(net, 2, neighborhood = "in") 177s [[1]] 177s [[1]]$inl 177s [1] 2 177s 177s [[1]]$outl 177s [1] 4 177s 177s [[1]]$atl 177s [[1]]$atl$na 177s [1] FALSE 177s 177s 177s 177s [[2]] 177s [[2]]$inl 177s [1] 2 177s 177s [[2]]$outl 177s [1] 3 177s 177s [[2]]$atl 177s [[2]]$atl$na 177s [1] FALSE 177s 177s 177s 177s [[3]] 177s [[3]]$inl 177s [1] 2 177s 177s [[3]]$outl 177s [1] 1 177s 177s [[3]]$atl 177s [[3]]$atl$na 177s [1] FALSE 177s 177s 177s 177s > get.edges(net, 1, alter = 2) 177s [[1]] 177s [[1]]$inl 177s [1] 2 177s 177s [[1]]$outl 177s [1] 1 177s 177s [[1]]$atl 177s [[1]]$atl$na 177s [1] FALSE 177s 177s 177s 177s > 177s > results[27] = get.edgeIDs(net, 1) == 4 177s > results[28] = all(get.edgeIDs(net, 2, neighborhood = "in") == c(7, 5, 4)) 177s > results[29] = get.edgeIDs(net, 1, alter = 2) == 4 177s > 177s > results[30] = get.neighborhood(net, 1) == 2 177s > results[31] = all(get.neighborhood(net, 2, type = "in") == c(4, 3, 1)) 177s > 177s > net[2,3] <- 0 177s > results[32] = net[2,3] == 0 177s > 177s > delete.edges(net, get.edgeIDs(net, 2, neighborhood = "in")) 177s > results[33] = all(net[,] == matrix(0, 6,6)) 177s > 177s > net <- network.initialize(5) 177s > set.network.attribute(net, "boo", 1:10) 177s > net %n% "hoo" <- letters[1:7] 177s > 177s > results[34] = 'boo' %in% list.network.attributes(net) 177s > results[35] = 'hoo' %in% list.network.attributes(net) 177s > 177s > results[36] = all(get.network.attribute(net, "boo") == c(1, 2, 3, 4, 5, 6, 7, 8, 9, 10)) 177s > results[37] = all(net %n% "hoo" == c("a", "b", "c", "d", "e", "f", "g")) 177s > 177s > delete.network.attribute(net, "boo") 177s > results[38] = 'boo' %in% list.network.attributes(net) == FALSE 177s > 177s > set.vertex.attribute(net, "boo", 1:5) 177s > net %v% "hoo" <- letters[1:5] 177s > results[39] = 'boo' %in% list.vertex.attributes(net) 177s > results[40] = 'hoo' %in% list.vertex.attributes(net) 177s > 177s > results[41] = all(get.vertex.attribute(net, "boo") == 1:5) 177s > results[42] = all(net %v% "hoo" == letters[1:5]) 177s > delete.vertex.attribute(net, "boo") 177s > results[43] = 'boo' %in% list.vertex.attributes(net) == FALSE 177s > 177s > net <- network(nmat) 177s > set.edge.attribute(net, "boo", sum(nmat):1) 177s > set.edge.value(net, "hoo", matrix(1:25, 5, 5)) 177s > net %e% "woo" <- matrix(rnorm(25), 5, 5) 177s > net[,, names.eval = "zoo"] <- nmat * 6 177s > results[44] = 'boo' %in% list.edge.attributes(net) 177s > results[45] = 'hoo' %in% list.edge.attributes(net) 177s > 177s > results[46] = all(get.edge.attribute(get.edges(net, 1), "boo") == c(3,7)) 177s > results[47] = all(get.edge.value(net, "hoo") == c(2, 3, 11, 14, 17, 18, 21)) 177s > net %e% "woo" 177s [1] 0.8984226 0.4793125 3.7056453 0.7033602 -0.6100306 -0.4825138 -1.2331196 177s > as.sociomatrix(net, "zoo") 177s 1 2 3 4 5 177s 1 0 0 6 0 6 177s 2 6 0 0 6 0 177s 3 6 0 0 6 0 177s 4 0 0 6 0 0 177s 5 0 0 0 0 0 177s > delete.edge.attribute(net, "boo") 177s > results[48] = 'boo' %in% list.edge.attributes(net) == FALSE 177s > 177s > MtSHloc <- emon$MtStHelens %v% "Location" 177s > MtSHimat <- cbind(MtSHloc %in% c("L", "B"), MtSHloc %in% c("NL", "B")) 177s > MtSHbyloc <- network(MtSHimat, matrix = "incidence", hyper = TRUE, 177s + directed = FALSE, loops = TRUE) 177s > MtSHbyloc %v% "vertex.names" <- emon$MtStHelens %v% "vertex.names" 177s > MtSHbyloc 177s Network attributes: 177s vertices = 27 177s directed = FALSE 177s hyper = TRUE 177s loops = TRUE 177s multiple = FALSE 177s bipartite = FALSE 177s total edges= 2 177s missing edges= 0 177s non-missing edges= 2 177s 177s Vertex attribute names: 177s vertex.names 177s 177s No edge attributes 177s > 177s > plot(nflo, displaylabels = TRUE, boxed.labels = FALSE) 177s > plot(nflo, displaylabels = TRUE, mode = "circle") 177s > plot(emon$MtSi) 177s > 177s > if (!all(results)) { 177s + stop(paste('The following tests in vignette.R failed:', which(results==FALSE))) 177s + } 177s > 177s > 178s autopkgtest [19:24:33]: test run-unit-test: -----------------------] 178s run-unit-test PASS 178s autopkgtest [19:24:33]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 179s autopkgtest [19:24:34]: test pkg-r-autopkgtest: preparing testbed 279s autopkgtest [19:26:14]: testbed dpkg architecture: arm64 279s autopkgtest [19:26:14]: testbed apt version: 2.7.12 279s autopkgtest [19:26:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 280s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 280s Get:2 http://ftpmaster.internal/ubuntu 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http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 283s Fetched 9065 kB in 2s (5053 kB/s) 283s Reading package lists... 286s Reading package lists... 286s Building dependency tree... 286s Reading state information... 287s Calculating upgrade... 287s The following packages will be REMOVED: 287s libglib2.0-0 libssl3 287s The following NEW packages will be installed: 287s libglib2.0-0t64 libssl3t64 xdg-user-dirs 287s The following packages have been kept back: 287s curl 287s The following packages will be upgraded: 288s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 288s ubuntu-minimal ubuntu-standard 288s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 288s Need to get 4613 kB of archives. 288s After this operation, 211 kB of additional disk space will be used. 288s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 288s Get:2 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 289s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 289s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 289s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 289s udisks2 depends on libglib2.0-0 (>= 2.77.0). 289s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 289s python3-gi depends on libglib2.0-0 (>= 2.77.0). 289s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 289s netplan.io depends on libglib2.0-0 (>= 2.70.0). 289s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 289s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 289s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 289s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 289s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 289s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 289s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 289s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 289s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 289s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 289s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 289s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 289s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 289s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 289s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 289s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 289s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 289s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 289s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 289s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 289s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 289s fwupd depends on libglib2.0-0 (>= 2.79.0). 289s bolt depends on libglib2.0-0 (>= 2.56.0). 289s 289s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 289s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 289s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 289s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 289s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 290s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 290s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 290s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 290s wget depends on libssl3 (>= 3.0.0). 290s u-boot-tools depends on libssl3 (>= 3.0.0). 290s tnftp depends on libssl3 (>= 3.0.0). 290s tcpdump depends on libssl3 (>= 3.0.0). 290s systemd-resolved depends on libssl3 (>= 3.0.0). 290s systemd depends on libssl3 (>= 3.0.0). 290s sudo depends on libssl3 (>= 3.0.0). 290s sbsigntool depends on libssl3 (>= 3.0.0). 290s rsync depends on libssl3 (>= 3.0.0). 290s python3-cryptography depends on libssl3 (>= 3.0.0). 290s openssh-server depends on libssl3 (>= 3.0.10). 290s openssh-client depends on libssl3 (>= 3.0.10). 290s mtd-utils depends on libssl3 (>= 3.0.0). 290s mokutil depends on libssl3 (>= 3.0.0). 290s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 290s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 290s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 290s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 290s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 290s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 290s libnvme1 depends on libssl3 (>= 3.0.0). 290s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 290s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 290s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 290s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 290s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 290s kmod depends on libssl3 (>= 3.0.0). 290s dhcpcd-base depends on libssl3 (>= 3.0.0). 290s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 290s 290s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 290s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 290s Selecting previously unselected package libssl3t64:arm64. 290s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 290s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 290s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 290s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 290s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 290s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 290s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 290s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 290s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 290s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 290s Unpacking ubuntu-minimal (1.536) over (1.535) ... 290s Selecting previously unselected package xdg-user-dirs. 290s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 290s Unpacking xdg-user-dirs (0.18-1) ... 290s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 290s Unpacking ubuntu-standard (1.536) over (1.535) ... 290s Setting up ubuntu-minimal (1.536) ... 290s Setting up xdg-user-dirs (0.18-1) ... 290s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 290s Setting up libtirpc-common (1.3.4+ds-1.1) ... 290s Setting up ubuntu-standard (1.536) ... 290s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 290s No schema files found: doing nothing. 290s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 290s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 290s Setting up openssl (3.0.13-0ubuntu1) ... 290s Setting up readline-common (8.2-3.1) ... 290s Processing triggers for man-db (2.12.0-3) ... 291s Processing triggers for install-info (7.1-3) ... 291s Processing triggers for libc-bin (2.39-0ubuntu2) ... 292s Reading package lists... 292s Building dependency tree... 292s Reading state information... 294s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 294s sh: Attempting to set up Debian/Ubuntu apt sources automatically 294s sh: Distribution appears to be Ubuntu 296s Reading package lists... 296s Building dependency tree... 296s Reading state information... 297s eatmydata is already the newest version (131-1). 297s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 298s Reading package lists... 298s Building dependency tree... 298s Reading state information... 299s dbus is already the newest version (1.14.10-4ubuntu1). 299s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 299s Reading package lists... 300s Building dependency tree... 300s Reading state information... 301s rng-tools-debian is already the newest version (2.4). 301s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 301s Reading package lists... 301s Building dependency tree... 301s Reading state information... 303s The following packages will be REMOVED: 303s cloud-init* python3-configobj* python3-debconf* 303s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 303s After this operation, 3252 kB disk space will be freed. 303s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 303s Removing cloud-init (24.1.1-0ubuntu1) ... 304s Removing python3-configobj (5.0.8-3) ... 304s Removing python3-debconf (1.5.86) ... 304s Processing triggers for man-db (2.12.0-3) ... 304s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74385 files and directories currently installed.) 304s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 305s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 305s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 305s invoke-rc.d: policy-rc.d denied execution of try-restart. 306s Reading package lists... 306s Building dependency tree... 306s Reading state information... 307s linux-generic is already the newest version (6.8.0-11.11+1). 307s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 307s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 308s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 308s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 310s Reading package lists... 310s Reading package lists... 310s Building dependency tree... 310s Reading state information... 311s Calculating upgrade... 312s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 312s Reading package lists... 312s Building dependency tree... 312s Reading state information... 313s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 314s autopkgtest [19:26:49]: rebooting testbed after setup commands that affected boot 345s Reading package lists... 345s Building dependency tree... 345s Reading state information... 345s Starting pkgProblemResolver with broken count: 0 346s Starting 2 pkgProblemResolver with broken count: 0 346s Done 347s The following additional packages will be installed: 347s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 347s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 347s fonts-glyphicons-halflings g++ g++-13 g++-13-aarch64-linux-gnu 347s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 347s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 347s gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev 347s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 347s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 347s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 347s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 347s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap liblapack-dev 347s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 347s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 347s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 347s libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev libsharpyuv0 libsm6 347s libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 347s libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 347s libxrender1 libxss1 libxt6 linux-libc-dev node-html5shiv pkg-config 347s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-cran-askpass 347s r-cran-brio r-cran-callr r-cran-cli r-cran-coda r-cran-covr r-cran-crayon 347s r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate 347s r-cran-fansi r-cran-fs r-cran-glue r-cran-httr r-cran-jsonlite 347s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-magrittr r-cran-mime 347s r-cran-network r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 347s r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps r-cran-r6 347s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot 347s r-cran-statnet.common r-cran-sys r-cran-testthat r-cran-tibble r-cran-utf8 347s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-yaml rpcsvc-proto unzip 347s x11-common xdg-utils zip zlib1g-dev 347s Suggested packages: 347s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 347s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 347s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 347s liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc 347s libstdc++-13-doc tcl8.6 tk8.6 nodejs elpa-ess r-doc-info | r-doc-pdf 347s r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic 347s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 347s texlive-latex-recommended texlive-latex-extra texinfo r-cran-spelling 347s r-cran-rstudioapi r-cran-knitr r-cran-rmarkdown r-cran-bit64 r-cran-dbi 347s r-cran-dplyr r-cran-formattable r-cran-ggplot2 r-cran-nanotime 347s r-cran-palmerpenguins r-cran-scales r-cran-stringi r-cran-survival 347s r-cran-units r-cran-vdiffr r-cran-hmisc r-cran-roxygen2 r-cran-rvest 347s r-cran-stringr r-cran-mass r-cran-matrix r-cran-bench r-cran-blob 347s r-cran-here r-cran-hms r-cran-htmltools r-cran-purrr r-cran-tidyr 347s Recommended packages: 347s bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended 347s r-doc-html r-cran-cliapp r-cran-mockery r-cran-htmltools r-cran-htmlwidgets 347s r-cran-knitr r-cran-rmarkdown r-cran-rstudioapi r-cran-whoami r-cran-dt 347s r-cran-xml2 r-cran-memoise r-cran-spelling r-cran-later r-cran-httpuv 347s r-cran-webutils r-cran-gh r-cran-ggplot2 r-cran-unitizer r-cran-dbi 347s r-cran-dplyr r-cran-rsqlite r-cran-jpeg r-cran-png r-cran-readr r-cran-r.rsp 347s r-cran-sf r-cran-lintr r-cran-tidyverse r-cran-sna r-cran-sodium 347s r-cran-lubridate r-cran-cpp11 r-cran-rcpp r-cran-bitops r-cran-mathjaxr 347s r-cran-mockr r-cran-remotes r-cran-codetools r-cran-webfakes r-cran-pingr 347s r-cran-usethis r-cran-shiny r-cran-data.table r-cran-formattable 347s r-cran-bit64 r-cran-generics r-cran-pkgdown r-cran-zeallot r-cran-runit 347s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 347s x11-xserver-utils 347s The following NEW packages will be installed: 347s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 347s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 347s fonts-dejavu-core fonts-dejavu-mono fonts-glyphicons-halflings g++ g++-13 347s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 347s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 347s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 347s libasan8 libatomic1 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev 347s libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 libfontconfig1 347s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 347s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 347s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 347s libjs-bootstrap liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev 347s libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 347s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 347s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 347s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data 347s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 347s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev 347s node-html5shiv pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 347s r-base-dev r-cran-askpass r-cran-brio r-cran-callr r-cran-cli r-cran-coda 347s r-cran-covr r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj 347s r-cran-digest r-cran-evaluate r-cran-fansi r-cran-fs r-cran-glue r-cran-httr 347s r-cran-jsonlite r-cran-lattice r-cran-lazyeval r-cran-lifecycle 347s r-cran-magrittr r-cran-mime r-cran-network r-cran-openssl r-cran-pillar 347s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload r-cran-praise 347s r-cran-processx r-cran-ps r-cran-r6 r-cran-rematch2 r-cran-rex r-cran-rlang 347s r-cran-rprojroot r-cran-statnet.common r-cran-sys r-cran-testthat 347s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo r-cran-withr r-cran-yaml 347s rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 347s 0 upgraded, 154 newly installed, 0 to remove and 0 not upgraded. 347s Need to get 147 MB/147 MB of archives. 347s After this operation, 449 MB of additional disk space will be used. 347s Get:1 /tmp/autopkgtest.X04CEn/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [732 B] 348s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 348s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 348s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 348s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 348s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 348s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 348s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 348s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 348s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 348s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 348s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 348s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 348s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 348s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 348s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 348s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 348s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 348s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 348s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 348s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 348s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 349s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 349s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 349s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 349s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 349s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 349s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 349s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 349s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 349s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 349s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 349s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 349s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 349s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 349s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 349s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 349s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 349s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 349s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 349s Get:41 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 349s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 350s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 350s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 350s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 350s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 350s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 350s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 350s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 350s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 350s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 350s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 350s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 350s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 350s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 350s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 350s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 350s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 350s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 350s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 350s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 350s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 350s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 350s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 350s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 350s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 350s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 350s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 350s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 350s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 350s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 350s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 350s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 350s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 350s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 350s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 350s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 350s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 350s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 350s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 350s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 350s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 350s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 350s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 350s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 350s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 350s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 350s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 350s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 350s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 351s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 351s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 351s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 351s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 351s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 351s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 351s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 351s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 351s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 351s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 351s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 351s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 351s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 351s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 351s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 351s Get:106 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 352s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 352s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 352s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 352s Get:110 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 352s Get:111 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 352s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 352s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 352s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 352s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 352s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 352s Get:117 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 352s Get:118 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 352s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-coda all 0.19-4.1-1 [321 kB] 352s Get:120 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 352s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 352s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 352s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 352s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 352s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 352s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 352s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 352s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 352s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 352s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 352s Get:131 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 352s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 352s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 352s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 352s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 352s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 352s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 352s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 352s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 352s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 352s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 352s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 352s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 352s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 352s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 352s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-statnet.common arm64 4.9.0-1 [258 kB] 352s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-network arm64 1.18.2-1 [816 kB] 352s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 352s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 352s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 352s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 352s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 352s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 352s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 354s Preconfiguring packages ... 354s Fetched 147 MB in 5s (28.3 MB/s) 354s Selecting previously unselected package libc-dev-bin. 354s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74330 files and directories currently installed.) 354s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 354s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 354s Selecting previously unselected package linux-libc-dev:arm64. 354s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_arm64.deb ... 354s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 354s Selecting previously unselected package libcrypt-dev:arm64. 354s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 354s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 354s Selecting previously unselected package libtirpc-dev:arm64. 354s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 354s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 354s Selecting previously unselected package libnsl-dev:arm64. 354s Preparing to unpack .../004-libnsl-dev_1.3.0-3_arm64.deb ... 354s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 355s Selecting previously unselected package rpcsvc-proto. 355s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 355s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 355s Selecting previously unselected package libc6-dev:arm64. 355s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_arm64.deb ... 355s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 355s Selecting previously unselected package libisl23:arm64. 355s Preparing to unpack .../007-libisl23_0.26-3_arm64.deb ... 355s Unpacking libisl23:arm64 (0.26-3) ... 355s Selecting previously unselected package libmpc3:arm64. 355s Preparing to unpack .../008-libmpc3_1.3.1-1_arm64.deb ... 355s Unpacking libmpc3:arm64 (1.3.1-1) ... 355s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 355s Preparing to unpack .../009-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 355s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 355s Selecting previously unselected package cpp-13. 355s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 355s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 355s Selecting previously unselected package cpp-aarch64-linux-gnu. 356s Preparing to unpack .../011-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 356s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 356s Selecting previously unselected package cpp. 356s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 356s Unpacking cpp (4:13.2.0-7ubuntu1) ... 356s Selecting previously unselected package libcc1-0:arm64. 356s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libgomp1:arm64. 356s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libitm1:arm64. 356s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libatomic1:arm64. 356s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libasan8:arm64. 356s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package liblsan0:arm64. 356s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libtsan2:arm64. 356s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libubsan1:arm64. 356s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libhwasan0:arm64. 356s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 356s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 356s Selecting previously unselected package libgcc-13-dev:arm64. 356s Preparing to unpack .../022-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 356s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 357s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 357s Preparing to unpack .../023-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 357s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 357s Selecting previously unselected package gcc-13. 357s Preparing to unpack .../024-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 357s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 357s Selecting previously unselected package gcc-aarch64-linux-gnu. 357s Preparing to unpack .../025-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 357s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 357s Selecting previously unselected package gcc. 357s Preparing to unpack .../026-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 357s Unpacking gcc (4:13.2.0-7ubuntu1) ... 357s Selecting previously unselected package libstdc++-13-dev:arm64. 357s Preparing to unpack .../027-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 357s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 358s Selecting previously unselected package g++-13-aarch64-linux-gnu. 358s Preparing to unpack .../028-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 358s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 358s Selecting previously unselected package g++-13. 358s Preparing to unpack .../029-g++-13_13.2.0-17ubuntu2_arm64.deb ... 358s Unpacking g++-13 (13.2.0-17ubuntu2) ... 358s Selecting previously unselected package g++-aarch64-linux-gnu. 358s Preparing to unpack .../030-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 358s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 358s Selecting previously unselected package g++. 358s Preparing to unpack .../031-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 358s Unpacking g++ (4:13.2.0-7ubuntu1) ... 358s Selecting previously unselected package build-essential. 358s Preparing to unpack .../032-build-essential_12.10ubuntu1_arm64.deb ... 358s Unpacking build-essential (12.10ubuntu1) ... 358s Selecting previously unselected package dctrl-tools. 358s Preparing to unpack .../033-dctrl-tools_2.24-3build2_arm64.deb ... 358s Unpacking dctrl-tools (2.24-3build2) ... 358s Selecting previously unselected package fonts-dejavu-mono. 358s Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... 358s Unpacking fonts-dejavu-mono (2.37-8) ... 358s Selecting previously unselected package fonts-dejavu-core. 358s Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... 358s Unpacking fonts-dejavu-core (2.37-8) ... 358s Selecting previously unselected package fontconfig-config. 358s Preparing to unpack .../036-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 359s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 359s Selecting previously unselected package libfontconfig1:arm64. 359s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 359s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 359s Selecting previously unselected package fontconfig. 359s Preparing to unpack .../038-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 359s Unpacking fontconfig (2.15.0-1ubuntu1) ... 359s Selecting previously unselected package fonts-glyphicons-halflings. 359s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 359s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 359s Selecting previously unselected package libgfortran5:arm64. 359s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 359s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 359s Selecting previously unselected package libgfortran-13-dev:arm64. 359s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 359s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 359s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 359s Preparing to unpack .../042-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 359s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 359s Selecting previously unselected package gfortran-13. 359s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 359s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 359s Selecting previously unselected package gfortran-aarch64-linux-gnu. 359s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 359s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 360s Selecting previously unselected package gfortran. 360s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 360s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 360s Selecting previously unselected package icu-devtools. 360s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu1_arm64.deb ... 360s Unpacking icu-devtools (74.2-1ubuntu1) ... 360s Selecting previously unselected package libblas3:arm64. 360s Preparing to unpack .../047-libblas3_3.12.0-3_arm64.deb ... 360s Unpacking libblas3:arm64 (3.12.0-3) ... 360s Selecting previously unselected package libblas-dev:arm64. 360s Preparing to unpack .../048-libblas-dev_3.12.0-3_arm64.deb ... 360s Unpacking libblas-dev:arm64 (3.12.0-3) ... 360s Selecting previously unselected package libbz2-dev:arm64. 360s Preparing to unpack .../049-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 360s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 360s Selecting previously unselected package libpixman-1-0:arm64. 360s Preparing to unpack .../050-libpixman-1-0_0.42.2-1_arm64.deb ... 360s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 360s Selecting previously unselected package libxcb-render0:arm64. 360s Preparing to unpack .../051-libxcb-render0_1.15-1_arm64.deb ... 360s Unpacking libxcb-render0:arm64 (1.15-1) ... 360s Selecting previously unselected package libxcb-shm0:arm64. 360s Preparing to unpack .../052-libxcb-shm0_1.15-1_arm64.deb ... 360s Unpacking libxcb-shm0:arm64 (1.15-1) ... 360s Selecting previously unselected package libxrender1:arm64. 360s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 360s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 360s Selecting previously unselected package libcairo2:arm64. 360s Preparing to unpack .../054-libcairo2_1.18.0-1_arm64.deb ... 360s Unpacking libcairo2:arm64 (1.18.0-1) ... 360s Selecting previously unselected package libdatrie1:arm64. 360s Preparing to unpack .../055-libdatrie1_0.2.13-3_arm64.deb ... 360s Unpacking libdatrie1:arm64 (0.2.13-3) ... 360s Selecting previously unselected package libdeflate0:arm64. 360s Preparing to unpack .../056-libdeflate0_1.19-1_arm64.deb ... 360s Unpacking libdeflate0:arm64 (1.19-1) ... 360s Selecting previously unselected package libgraphite2-3:arm64. 360s Preparing to unpack .../057-libgraphite2-3_1.3.14-2_arm64.deb ... 360s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 360s Selecting previously unselected package libharfbuzz0b:arm64. 360s Preparing to unpack .../058-libharfbuzz0b_8.3.0-2_arm64.deb ... 360s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 360s Selecting previously unselected package x11-common. 360s Preparing to unpack .../059-x11-common_1%3a7.7+23ubuntu2_all.deb ... 360s Unpacking x11-common (1:7.7+23ubuntu2) ... 360s Selecting previously unselected package libice6:arm64. 360s Preparing to unpack .../060-libice6_2%3a1.0.10-1build2_arm64.deb ... 360s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 360s Selecting previously unselected package libicu-dev:arm64. 360s Preparing to unpack .../061-libicu-dev_74.2-1ubuntu1_arm64.deb ... 360s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 361s Selecting previously unselected package libjpeg-turbo8:arm64. 361s Preparing to unpack .../062-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 361s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 361s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 361s Preparing to unpack .../063-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 361s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 361s Selecting previously unselected package libjpeg8:arm64. 361s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_arm64.deb ... 361s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 361s Selecting previously unselected package libjpeg8-dev:arm64. 361s Preparing to unpack .../065-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 361s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 361s Selecting previously unselected package libjpeg-dev:arm64. 361s Preparing to unpack .../066-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 361s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 361s Selecting previously unselected package libjs-bootstrap. 361s Preparing to unpack .../067-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 361s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 361s Selecting previously unselected package liblapack3:arm64. 361s Preparing to unpack .../068-liblapack3_3.12.0-3_arm64.deb ... 361s Unpacking liblapack3:arm64 (3.12.0-3) ... 361s Selecting previously unselected package liblapack-dev:arm64. 361s Preparing to unpack .../069-liblapack-dev_3.12.0-3_arm64.deb ... 361s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 361s Selecting previously unselected package liblerc4:arm64. 361s Preparing to unpack .../070-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 361s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 361s Selecting previously unselected package libncurses-dev:arm64. 361s Preparing to unpack .../071-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 361s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 362s Selecting previously unselected package libthai-data. 362s Preparing to unpack .../072-libthai-data_0.1.29-2_all.deb ... 362s Unpacking libthai-data (0.1.29-2) ... 362s Selecting previously unselected package libthai0:arm64. 362s Preparing to unpack .../073-libthai0_0.1.29-2_arm64.deb ... 362s Unpacking libthai0:arm64 (0.1.29-2) ... 362s Selecting previously unselected package libpango-1.0-0:arm64. 362s Preparing to unpack .../074-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 362s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 362s Selecting previously unselected package libpangoft2-1.0-0:arm64. 362s Preparing to unpack .../075-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 362s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 362s Selecting previously unselected package libpangocairo-1.0-0:arm64. 362s Preparing to unpack .../076-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 362s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 362s Selecting previously unselected package libpaper1:arm64. 362s Preparing to unpack .../077-libpaper1_1.1.29_arm64.deb ... 362s Unpacking libpaper1:arm64 (1.1.29) ... 362s Selecting previously unselected package libpaper-utils. 362s Preparing to unpack .../078-libpaper-utils_1.1.29_arm64.deb ... 362s Unpacking libpaper-utils (1.1.29) ... 362s Selecting previously unselected package libpcre2-16-0:arm64. 362s Preparing to unpack .../079-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 362s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 362s Selecting previously unselected package libpcre2-32-0:arm64. 362s Preparing to unpack .../080-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 362s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 362s Selecting previously unselected package libpcre2-posix3:arm64. 362s Preparing to unpack .../081-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 362s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 362s Selecting previously unselected package libpcre2-dev:arm64. 362s Preparing to unpack .../082-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 362s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 362s Selecting previously unselected package libpkgconf3:arm64. 362s Preparing to unpack .../083-libpkgconf3_1.8.1-2_arm64.deb ... 362s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 362s Selecting previously unselected package zlib1g-dev:arm64. 362s Preparing to unpack .../084-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 362s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 362s Selecting previously unselected package libpng-dev:arm64. 362s Preparing to unpack .../085-libpng-dev_1.6.43-1_arm64.deb ... 362s Unpacking libpng-dev:arm64 (1.6.43-1) ... 363s Selecting previously unselected package libreadline-dev:arm64. 363s Preparing to unpack .../086-libreadline-dev_8.2-3_arm64.deb ... 363s Unpacking libreadline-dev:arm64 (8.2-3) ... 363s Selecting previously unselected package libsharpyuv0:arm64. 363s Preparing to unpack .../087-libsharpyuv0_1.3.2-0.4_arm64.deb ... 363s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 363s Selecting previously unselected package libsm6:arm64. 363s Preparing to unpack .../088-libsm6_2%3a1.2.3-1build2_arm64.deb ... 363s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 363s Selecting previously unselected package libtcl8.6:arm64. 363s Preparing to unpack .../089-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 363s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 363s Selecting previously unselected package libjbig0:arm64. 363s Preparing to unpack .../090-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 363s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 363s Selecting previously unselected package libwebp7:arm64. 363s Preparing to unpack .../091-libwebp7_1.3.2-0.4_arm64.deb ... 363s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 363s Selecting previously unselected package libtiff6:arm64. 363s Preparing to unpack .../092-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 363s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 363s Selecting previously unselected package libxft2:arm64. 363s Preparing to unpack .../093-libxft2_2.3.6-1_arm64.deb ... 363s Unpacking libxft2:arm64 (2.3.6-1) ... 363s Selecting previously unselected package libxss1:arm64. 363s Preparing to unpack .../094-libxss1_1%3a1.2.3-1build2_arm64.deb ... 363s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 363s Selecting previously unselected package libtk8.6:arm64. 363s Preparing to unpack .../095-libtk8.6_8.6.13-2_arm64.deb ... 363s Unpacking libtk8.6:arm64 (8.6.13-2) ... 363s Selecting previously unselected package libxt6:arm64. 363s Preparing to unpack .../096-libxt6_1%3a1.2.1-1.1_arm64.deb ... 363s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 363s Selecting previously unselected package node-html5shiv. 363s Preparing to unpack .../097-node-html5shiv_3.7.3+dfsg-5_all.deb ... 363s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 363s Selecting previously unselected package pkgconf-bin. 364s Preparing to unpack .../098-pkgconf-bin_1.8.1-2_arm64.deb ... 364s Unpacking pkgconf-bin (1.8.1-2) ... 364s Selecting previously unselected package pkgconf:arm64. 364s Preparing to unpack .../099-pkgconf_1.8.1-2_arm64.deb ... 364s Unpacking pkgconf:arm64 (1.8.1-2) ... 364s Selecting previously unselected package pkg-config:arm64. 364s Preparing to unpack .../100-pkg-config_1.8.1-2_arm64.deb ... 364s Unpacking pkg-config:arm64 (1.8.1-2) ... 364s Selecting previously unselected package zip. 364s Preparing to unpack .../101-zip_3.0-13_arm64.deb ... 364s Unpacking zip (3.0-13) ... 364s Selecting previously unselected package unzip. 364s Preparing to unpack .../102-unzip_6.0-28ubuntu3_arm64.deb ... 364s Unpacking unzip (6.0-28ubuntu3) ... 364s Selecting previously unselected package xdg-utils. 364s Preparing to unpack .../103-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 364s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 364s Selecting previously unselected package r-base-core. 364s Preparing to unpack .../104-r-base-core_4.3.2-1build1_arm64.deb ... 364s Unpacking r-base-core (4.3.2-1build1) ... 364s Selecting previously unselected package liblzma-dev:arm64. 364s Preparing to unpack .../105-liblzma-dev_5.4.5-0.3_arm64.deb ... 364s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 364s Selecting previously unselected package r-base-dev. 364s Preparing to unpack .../106-r-base-dev_4.3.2-1build1_all.deb ... 364s Unpacking r-base-dev (4.3.2-1build1) ... 364s Selecting previously unselected package pkg-r-autopkgtest. 365s Preparing to unpack .../107-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 365s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 365s Selecting previously unselected package r-cran-sys. 365s Preparing to unpack .../108-r-cran-sys_3.4.2-1_arm64.deb ... 365s Unpacking r-cran-sys (3.4.2-1) ... 365s Selecting previously unselected package r-cran-askpass. 365s Preparing to unpack .../109-r-cran-askpass_1.2.0-1_arm64.deb ... 365s Unpacking r-cran-askpass (1.2.0-1) ... 365s Selecting previously unselected package r-cran-brio. 365s Preparing to unpack .../110-r-cran-brio_1.1.4-1_arm64.deb ... 365s Unpacking r-cran-brio (1.1.4-1) ... 365s Selecting previously unselected package r-cran-ps. 365s Preparing to unpack .../111-r-cran-ps_1.7.6-1_arm64.deb ... 365s Unpacking r-cran-ps (1.7.6-1) ... 365s Selecting previously unselected package r-cran-r6. 365s Preparing to unpack .../112-r-cran-r6_2.5.1-1_all.deb ... 365s Unpacking r-cran-r6 (2.5.1-1) ... 365s Selecting previously unselected package r-cran-processx. 365s Preparing to unpack .../113-r-cran-processx_3.8.3-1_arm64.deb ... 365s Unpacking r-cran-processx (3.8.3-1) ... 365s Selecting previously unselected package r-cran-callr. 365s Preparing to unpack .../114-r-cran-callr_3.7.3-2_all.deb ... 365s Unpacking r-cran-callr (3.7.3-2) ... 365s Selecting previously unselected package r-cran-cli. 365s Preparing to unpack .../115-r-cran-cli_3.6.2-1_arm64.deb ... 365s Unpacking r-cran-cli (3.6.2-1) ... 365s Selecting previously unselected package r-cran-lattice. 365s Preparing to unpack .../116-r-cran-lattice_0.22-5-1_arm64.deb ... 365s Unpacking r-cran-lattice (0.22-5-1) ... 365s Selecting previously unselected package r-cran-coda. 365s Preparing to unpack .../117-r-cran-coda_0.19-4.1-1_all.deb ... 365s Unpacking r-cran-coda (0.19-4.1-1) ... 365s Selecting previously unselected package r-cran-digest. 365s Preparing to unpack .../118-r-cran-digest_0.6.34-1_arm64.deb ... 365s Unpacking r-cran-digest (0.6.34-1) ... 365s Selecting previously unselected package r-cran-jsonlite. 365s Preparing to unpack .../119-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 365s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 365s Selecting previously unselected package r-cran-lazyeval. 365s Preparing to unpack .../120-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 365s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 365s Selecting previously unselected package r-cran-rex. 365s Preparing to unpack .../121-r-cran-rex_1.2.1-1_all.deb ... 365s Unpacking r-cran-rex (1.2.1-1) ... 365s Selecting previously unselected package r-cran-curl. 365s Preparing to unpack .../122-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 365s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 366s Selecting previously unselected package r-cran-mime. 366s Preparing to unpack .../123-r-cran-mime_0.12-1_arm64.deb ... 366s Unpacking r-cran-mime (0.12-1) ... 366s Selecting previously unselected package r-cran-openssl. 366s Preparing to unpack .../124-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 366s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 366s Selecting previously unselected package r-cran-httr. 366s Preparing to unpack .../125-r-cran-httr_1.4.7+dfsg-1_all.deb ... 366s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 366s Selecting previously unselected package r-cran-crayon. 366s Preparing to unpack .../126-r-cran-crayon_1.5.2-1_all.deb ... 366s Unpacking r-cran-crayon (1.5.2-1) ... 366s Selecting previously unselected package r-cran-withr. 366s Preparing to unpack .../127-r-cran-withr_2.5.0-1_all.deb ... 366s Unpacking r-cran-withr (2.5.0-1) ... 366s Selecting previously unselected package r-cran-yaml. 366s Preparing to unpack .../128-r-cran-yaml_2.3.8-1_arm64.deb ... 366s Unpacking r-cran-yaml (2.3.8-1) ... 366s Selecting previously unselected package r-cran-covr. 366s Preparing to unpack .../129-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 366s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 366s Selecting previously unselected package r-cran-desc. 366s Preparing to unpack .../130-r-cran-desc_1.4.3-1_all.deb ... 366s Unpacking r-cran-desc (1.4.3-1) ... 366s Selecting previously unselected package r-cran-diffobj. 366s Preparing to unpack .../131-r-cran-diffobj_0.3.5-1_arm64.deb ... 366s Unpacking r-cran-diffobj (0.3.5-1) ... 366s Selecting previously unselected package r-cran-evaluate. 366s Preparing to unpack .../132-r-cran-evaluate_0.23-1_all.deb ... 366s Unpacking r-cran-evaluate (0.23-1) ... 366s Selecting previously unselected package r-cran-fansi. 366s Preparing to unpack .../133-r-cran-fansi_1.0.5-1_arm64.deb ... 366s Unpacking r-cran-fansi (1.0.5-1) ... 366s Selecting previously unselected package r-cran-fs. 366s Preparing to unpack .../134-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 366s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 366s Selecting previously unselected package r-cran-glue. 366s Preparing to unpack .../135-r-cran-glue_1.7.0-1_arm64.deb ... 366s Unpacking r-cran-glue (1.7.0-1) ... 366s Selecting previously unselected package r-cran-rlang. 367s Preparing to unpack .../136-r-cran-rlang_1.1.3-1_arm64.deb ... 367s Unpacking r-cran-rlang (1.1.3-1) ... 367s Selecting previously unselected package r-cran-lifecycle. 367s Preparing to unpack .../137-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 367s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 367s Selecting previously unselected package r-cran-magrittr. 367s Preparing to unpack .../138-r-cran-magrittr_2.0.3-1_arm64.deb ... 367s Unpacking r-cran-magrittr (2.0.3-1) ... 367s Selecting previously unselected package r-cran-utf8. 367s Preparing to unpack .../139-r-cran-utf8_1.2.4-1_arm64.deb ... 367s Unpacking r-cran-utf8 (1.2.4-1) ... 367s Selecting previously unselected package r-cran-vctrs. 367s Preparing to unpack .../140-r-cran-vctrs_0.6.5-1_arm64.deb ... 367s Unpacking r-cran-vctrs (0.6.5-1) ... 367s Selecting previously unselected package r-cran-pillar. 367s Preparing to unpack .../141-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 367s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 367s Selecting previously unselected package r-cran-pkgconfig. 367s Preparing to unpack .../142-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 367s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 367s Selecting previously unselected package r-cran-tibble. 367s Preparing to unpack .../143-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 367s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 367s Selecting previously unselected package r-cran-statnet.common. 367s Preparing to unpack .../144-r-cran-statnet.common_4.9.0-1_arm64.deb ... 367s Unpacking r-cran-statnet.common (4.9.0-1) ... 367s Selecting previously unselected package r-cran-network. 367s Preparing to unpack .../145-r-cran-network_1.18.2-1_arm64.deb ... 367s Unpacking r-cran-network (1.18.2-1) ... 367s Selecting previously unselected package r-cran-pkgbuild. 367s Preparing to unpack .../146-r-cran-pkgbuild_1.4.3-1_all.deb ... 367s Unpacking r-cran-pkgbuild (1.4.3-1) ... 367s Selecting previously unselected package r-cran-rprojroot. 367s Preparing to unpack .../147-r-cran-rprojroot_2.0.4-1_all.deb ... 367s Unpacking r-cran-rprojroot (2.0.4-1) ... 367s Selecting previously unselected package r-cran-pkgload. 367s Preparing to unpack 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libgraphite2-3:arm64 (1.3.14-2) ... 368s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 368s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 368s Setting up libpaper1:arm64 (1.1.29) ... 368s 368s Creating config file /etc/papersize with new version 368s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 368s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 368s Setting up libdatrie1:arm64 (0.2.13-3) ... 368s Setting up libxcb-render0:arm64 (1.15-1) ... 368s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 368s Setting up unzip (6.0-28ubuntu3) ... 368s Setting up x11-common (1:7.7+23ubuntu2) ... 369s Setting up node-html5shiv (3.7.3+dfsg-5) ... 369s Setting up libdeflate0:arm64 (1.19-1) ... 369s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 369s Setting up libxcb-shm0:arm64 (1.15-1) ... 369s Setting up libpaper-utils (1.1.29) ... 369s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 369s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 369s Setting up zip (3.0-13) ... 369s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 369s Setting up libblas3:arm64 (3.12.0-3) ... 369s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 369s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 369s Setting up libpkgconf3:arm64 (1.8.1-2) ... 369s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 369s Setting up fonts-dejavu-mono (2.37-8) ... 369s Setting up libmpc3:arm64 (1.3.1-1) ... 369s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 369s Setting up icu-devtools (74.2-1ubuntu1) ... 369s Setting up fonts-dejavu-core (2.37-8) ... 369s Setting up pkgconf-bin (1.8.1-2) ... 369s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 369s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libwebp7:arm64 (1.3.2-0.4) ... 369s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 369s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 369s Setting up libnsl-dev:arm64 (1.3.0-3) ... 369s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 369s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 369s Setting up libthai-data (0.1.29-2) ... 369s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 369s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libisl23:arm64 (0.26-3) ... 369s Setting up libc-dev-bin (2.39-0ubuntu2) ... 369s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 369s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 369s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 369s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libblas-dev:arm64 (3.12.0-3) ... 369s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 369s Setting up dctrl-tools (2.24-3build2) ... 369s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 369s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 369s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 369s Setting up libice6:arm64 (2:1.0.10-1build2) ... 369s Setting up liblapack3:arm64 (3.12.0-3) ... 369s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 369s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 369s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 369s Setting up pkgconf:arm64 (1.8.1-2) ... 369s Setting up libthai0:arm64 (0.1.29-2) ... 369s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 369s Setting up liblapack-dev:arm64 (3.12.0-3) ... 369s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 369s Setting up pkg-config:arm64 (1.8.1-2) ... 369s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 369s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 369s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 369s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 369s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 369s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 369s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 369s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 369s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 369s Setting up fontconfig (2.15.0-1ubuntu1) ... 371s Regenerating fonts cache... done. 371s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 371s Setting up libxft2:arm64 (2.3.6-1) ... 371s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 371s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 371s Setting up cpp-13 (13.2.0-17ubuntu2) ... 371s Setting up libtk8.6:arm64 (8.6.13-2) ... 371s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 371s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 371s Setting up libreadline-dev:arm64 (8.2-3) ... 371s Setting up libcairo2:arm64 (1.18.0-1) ... 371s Setting up gcc-13 (13.2.0-17ubuntu2) ... 371s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 371s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 371s Setting up cpp (4:13.2.0-7ubuntu1) ... 371s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 371s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 371s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 371s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 371s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 371s Setting up g++-13 (13.2.0-17ubuntu2) ... 371s Setting up libpng-dev:arm64 (1.6.43-1) ... 371s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 371s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 371s Setting up gcc (4:13.2.0-7ubuntu1) ... 371s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 371s Setting up r-base-core (4.3.2-1build1) ... 372s 372s Creating config file /etc/R/Renviron with new version 372s Setting up r-cran-crayon (1.5.2-1) ... 372s Setting up r-cran-lattice (0.22-5-1) ... 372s Setting up r-cran-ps (1.7.6-1) ... 372s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 372s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 372s Setting up r-cran-lazyeval (0.2.2-1build1) ... 372s Setting up r-cran-r6 (2.5.1-1) ... 372s Setting up r-cran-coda (0.19-4.1-1) ... 372s Setting up r-cran-magrittr (2.0.3-1) ... 372s Setting up r-cran-fs (1.6.3+dfsg-1) ... 372s Setting up r-cran-curl (5.2.0+dfsg-1) ... 372s Setting up r-cran-brio (1.1.4-1) ... 372s Setting up r-cran-diffobj (0.3.5-1) ... 372s Setting up r-cran-rlang (1.1.3-1) ... 372s Setting up r-cran-sys (3.4.2-1) ... 372s Setting up r-cran-withr (2.5.0-1) ... 372s Setting up r-cran-processx (3.8.3-1) ... 372s Setting up r-cran-mime (0.12-1) ... 372s Setting up r-cran-praise (1.0.0-4build1) ... 372s Setting up r-cran-digest (0.6.34-1) ... 372s Setting up r-cran-yaml (2.3.8-1) ... 372s Setting up r-cran-evaluate (0.23-1) ... 372s Setting up r-cran-fansi (1.0.5-1) ... 372s Setting up r-cran-glue (1.7.0-1) ... 372s Setting up r-cran-cli (3.6.2-1) ... 372s Setting up gfortran (4:13.2.0-7ubuntu1) ... 372s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 372s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 372s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 372s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 372s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 372s Setting up r-cran-rprojroot (2.0.4-1) ... 372s Setting up r-cran-askpass (1.2.0-1) ... 372s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 372s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 372s Setting up r-cran-utf8 (1.2.4-1) ... 372s Setting up r-cran-rex (1.2.1-1) ... 372s Setting up g++ (4:13.2.0-7ubuntu1) ... 372s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 372s Setting up build-essential (12.10ubuntu1) ... 372s Setting up r-cran-statnet.common (4.9.0-1) ... 372s Setting up r-cran-vctrs (0.6.5-1) ... 372s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 372s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 372s Setting up r-base-dev (4.3.2-1build1) ... 372s Setting up r-cran-callr (3.7.3-2) ... 372s Setting up r-cran-desc (1.4.3-1) ... 372s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 372s Setting up r-cran-network (1.18.2-1) ... 372s Setting up r-cran-httr (1.4.7+dfsg-1) ... 372s Setting up r-cran-covr (3.6.4+dfsg-1) ... 372s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 372s Setting up r-cran-pkgbuild (1.4.3-1) ... 372s Setting up r-cran-pkgload (1.3.4-1) ... 372s Setting up r-cran-rematch2 (2.1.2-2build1) ... 372s Setting up r-cran-waldo (0.5.2-1build1) ... 372s Setting up r-cran-testthat (3.2.1-1) ... 372s Setting up autopkgtest-satdep (0) ... 372s Processing triggers for man-db (2.12.0-3) ... 374s Processing triggers for install-info (7.1-3) ... 374s Processing triggers for libc-bin (2.39-0ubuntu2) ... 387s (Reading database ... 84434 files and directories currently installed.) 387s Removing autopkgtest-satdep (0) ... 388s autopkgtest [19:28:03]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 388s autopkgtest [19:28:03]: test pkg-r-autopkgtest: [----------------------- 389s Test: Try to load the R library network 389s 389s R version 4.3.2 (2023-10-31) -- "Eye Holes" 389s Copyright (C) 2023 The R Foundation for Statistical Computing 389s Platform: aarch64-unknown-linux-gnu (64-bit) 389s 389s R is free software and comes with ABSOLUTELY NO WARRANTY. 389s You are welcome to redistribute it under certain conditions. 389s Type 'license()' or 'licence()' for distribution details. 389s 389s R is a collaborative project with many contributors. 389s Type 'contributors()' for more information and 389s 'citation()' on how to cite R or R packages in publications. 389s 389s Type 'demo()' for some demos, 'help()' for on-line help, or 389s 'help.start()' for an HTML browser interface to help. 389s Type 'q()' to quit R. 389s 389s > library('network') 390s 390s ‘network’ 1.18.2 (2023-12-04), part of the Statnet Project 390s * ‘news(package="network")’ for changes since last version 390s * ‘citation("network")’ for citation information 390s * ‘https://statnet.org’ for help, support, and other information 390s 390s > 390s > 390s Other tests are currently unsupported! 390s They will be progressively added. 391s autopkgtest [19:28:06]: test pkg-r-autopkgtest: -----------------------] 391s pkg-r-autopkgtest PASS 391s autopkgtest [19:28:06]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 391s autopkgtest [19:28:06]: @@@@@@@@@@@@@@@@@@@@ summary 391s run-unit-test PASS 391s pkg-r-autopkgtest PASS 411s Creating nova instance adt-noble-arm64-r-cran-network-20240316-192135-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)... 411s Creating nova instance adt-noble-arm64-r-cran-network-20240316-192135-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...