0s autopkgtest [19:19:09]: starting date and time: 2024-03-16 19:19:09+0000 0s autopkgtest [19:19:09]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:19:09]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.b5o5ybuz/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-msm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-11.secgroup --name adt-noble-arm64-r-cran-msm-20240316-191909-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 72s autopkgtest [19:20:21]: testbed dpkg architecture: arm64 72s autopkgtest [19:20:21]: testbed apt version: 2.7.12 72s autopkgtest [19:20:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup 72s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 73s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 73s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB] 73s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 73s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 73s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 73s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 73s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 73s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 73s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4013 kB] 73s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 73s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 73s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 75s Fetched 9065 kB in 2s (5464 kB/s) 75s Reading package lists... 78s Reading package lists... 78s Building dependency tree... 78s Reading state information... 79s Calculating upgrade... 79s The following packages will be REMOVED: 79s libglib2.0-0 libssl3 79s The following NEW packages will be installed: 79s libglib2.0-0t64 libssl3t64 xdg-user-dirs 79s The following packages have been kept back: 79s curl 79s The following packages will be upgraded: 79s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 79s ubuntu-minimal ubuntu-standard 79s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 79s Need to get 4613 kB of archives. 79s After this operation, 211 kB of additional disk space will be used. 79s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 80s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 80s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 80s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 80s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 80s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 80s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 80s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 80s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 80s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 80s Fetched 4613 kB in 1s (5957 kB/s) 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 81s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 81s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 81s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 81s udisks2 depends on libglib2.0-0 (>= 2.77.0). 81s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 81s python3-gi depends on libglib2.0-0 (>= 2.77.0). 81s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 81s netplan.io depends on libglib2.0-0 (>= 2.70.0). 81s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 81s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 81s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 81s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 81s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 81s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 81s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 81s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 81s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 81s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 81s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 81s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 81s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 81s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 81s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 81s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 81s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 81s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 81s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 81s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 81s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 81s fwupd depends on libglib2.0-0 (>= 2.79.0). 81s bolt depends on libglib2.0-0 (>= 2.56.0). 81s 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 81s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 81s Selecting previously unselected package libglib2.0-0t64:arm64. 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 81s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 81s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 81s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 81s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 81s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 81s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 81s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 81s wget depends on libssl3 (>= 3.0.0). 81s u-boot-tools depends on libssl3 (>= 3.0.0). 81s tnftp depends on libssl3 (>= 3.0.0). 81s tcpdump depends on libssl3 (>= 3.0.0). 81s systemd-resolved depends on libssl3 (>= 3.0.0). 81s systemd depends on libssl3 (>= 3.0.0). 81s sudo depends on libssl3 (>= 3.0.0). 81s sbsigntool depends on libssl3 (>= 3.0.0). 81s rsync depends on libssl3 (>= 3.0.0). 81s python3-cryptography depends on libssl3 (>= 3.0.0). 81s openssh-server depends on libssl3 (>= 3.0.10). 81s openssh-client depends on libssl3 (>= 3.0.10). 81s mtd-utils depends on libssl3 (>= 3.0.0). 81s mokutil depends on libssl3 (>= 3.0.0). 81s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 81s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 81s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 81s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 81s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 81s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 81s libnvme1 depends on libssl3 (>= 3.0.0). 81s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 81s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 81s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 81s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 81s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 81s kmod depends on libssl3 (>= 3.0.0). 81s dhcpcd-base depends on libssl3 (>= 3.0.0). 81s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 81s 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 81s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 81s Selecting previously unselected package libssl3t64:arm64. 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 81s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 81s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 81s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 81s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 81s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 81s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 81s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 81s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 81s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 81s Unpacking ubuntu-minimal (1.536) over (1.535) ... 81s Selecting previously unselected package xdg-user-dirs. 81s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 81s Unpacking xdg-user-dirs (0.18-1) ... 81s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 81s Unpacking ubuntu-standard (1.536) over (1.535) ... 81s Setting up ubuntu-minimal (1.536) ... 81s Setting up xdg-user-dirs (0.18-1) ... 81s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 81s Setting up libtirpc-common (1.3.4+ds-1.1) ... 81s Setting up ubuntu-standard (1.536) ... 81s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 81s No schema files found: doing nothing. 81s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 81s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 81s Setting up openssl (3.0.13-0ubuntu1) ... 81s Setting up readline-common (8.2-3.1) ... 81s Processing triggers for man-db (2.12.0-3) ... 82s Processing triggers for install-info (7.1-3) ... 82s Processing triggers for libc-bin (2.39-0ubuntu2) ... 82s Reading package lists... 83s Building dependency tree... 83s Reading state information... 83s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 84s sh: Attempting to set up Debian/Ubuntu apt sources automatically 84s sh: Distribution appears to be Ubuntu 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s eatmydata is already the newest version (131-1). 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s Reading package lists... 86s Building dependency tree... 86s Reading state information... 86s dbus is already the newest version (1.14.10-4ubuntu1). 86s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 86s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s rng-tools-debian is already the newest version (2.4). 87s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s Reading package lists... 87s Building dependency tree... 87s Reading state information... 88s The following packages will be REMOVED: 88s cloud-init* python3-configobj* python3-debconf* 88s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 88s After this operation, 3252 kB disk space will be freed. 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 88s Removing cloud-init (24.1.1-0ubuntu1) ... 89s Removing python3-configobj (5.0.8-3) ... 89s Removing python3-debconf (1.5.86) ... 89s Processing triggers for man-db (2.12.0-3) ... 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74385 files and directories currently installed.) 90s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 90s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 90s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 90s invoke-rc.d: policy-rc.d denied execution of try-restart. 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s linux-generic is already the newest version (6.8.0-11.11+1). 91s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 92s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 92s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 94s Reading package lists... 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 94s Calculating upgrade... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 96s autopkgtest [19:20:45]: rebooting testbed after setup commands that affected boot 267s autopkgtest [19:23:36]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 270s autopkgtest [19:23:39]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-msm 272s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-msm 1.7.1-1 (dsc) [2179 B] 272s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-msm 1.7.1-1 (tar) [940 kB] 272s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-msm 1.7.1-1 (diff) [4704 B] 272s gpgv: Signature made Mon Nov 27 19:32:40 2023 UTC 272s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 272s gpgv: issuer "tille@debian.org" 272s gpgv: Can't check signature: No public key 272s dpkg-source: warning: cannot verify inline signature for ./r-cran-msm_1.7.1-1.dsc: no acceptable signature found 272s autopkgtest [19:23:41]: testing package r-cran-msm version 1.7.1-1 273s autopkgtest [19:23:42]: build not needed 274s autopkgtest [19:23:43]: test run-unit-test: preparing testbed 275s Reading package lists... 276s Building dependency tree... 276s Reading state information... 276s Starting pkgProblemResolver with broken count: 0 276s Starting 2 pkgProblemResolver with broken count: 0 276s Done 276s The following additional packages will be installed: 276s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 276s fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 libdeflate0 276s libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 276s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap liblapack3 liblerc4 276s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 276s libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 276s libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 276s libxss1 libxt6 littler node-html5shiv r-base-core r-cran-askpass r-cran-brio 276s r-cran-callr r-cran-cli r-cran-codetools r-cran-covr r-cran-crayon 276s r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest r-cran-doparallel 276s r-cran-evaluate r-cran-expm r-cran-fansi r-cran-foreach r-cran-fs 276s r-cran-glue r-cran-httr r-cran-iterators r-cran-jsonlite r-cran-lattice 276s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr 276s r-cran-matrix r-cran-mime r-cran-minqa r-cran-msm r-cran-mvtnorm 276s r-cran-numderiv r-cran-openssl r-cran-pillar r-cran-pkgbuild 276s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-praise 276s r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex 276s r-cran-rlang r-cran-rprojroot r-cran-survival r-cran-sys r-cran-testthat 276s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo r-cran-withr r-cran-yaml 276s unzip x11-common xdg-utils zip 276s Suggested packages: 276s tcl8.6 tk8.6 nodejs elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 276s r-cran-spelling r-cran-rstudioapi r-cran-knitr r-cran-rmarkdown 276s r-cran-getopt r-cran-bit64 r-cran-dbi r-cran-dplyr r-cran-formattable 276s r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins r-cran-scales 276s r-cran-stringi r-cran-units r-cran-vdiffr r-cran-inline r-cran-hmisc 276s r-cran-roxygen2 r-cran-rvest r-cran-stringr r-cran-bench r-cran-blob 276s r-cran-here r-cran-hms r-cran-htmltools r-cran-purrr r-cran-tidyr 276s Recommended packages: 276s r-recommended r-base-dev r-doc-html r-cran-cliapp r-cran-mockery 276s r-cran-htmltools r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown 276s r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise 276s r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils r-cran-gh 276s r-cran-runit r-cran-caret r-cran-mlbench r-cran-rpart r-cran-ggplot2 276s r-cran-rcolorbrewer r-cran-sfsmisc r-cran-rmpfr r-cran-unitizer r-cran-dbi 276s r-cran-dplyr r-cran-rsqlite r-cran-jpeg r-cran-png r-cran-readr r-cran-r.rsp 276s r-cran-sf r-cran-lintr r-cran-tidyverse r-cran-sodium r-cran-lubridate 276s r-cran-cpp11 r-cran-bitops r-cran-mathjaxr r-cran-mockr r-cran-remotes 276s r-cran-webfakes r-cran-pingr r-cran-usethis r-cran-shiny r-cran-data.table 276s r-cran-formattable r-cran-bit64 r-cran-generics r-cran-pkgdown 276s r-cran-zeallot libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 276s x11-utils x11-xserver-utils 276s The following NEW packages will be installed: 276s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 276s fonts-dejavu-mono fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 276s libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 276s libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 276s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 276s libpaper-utils libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 276s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 276s libxft2 libxrender1 libxss1 libxt6 littler node-html5shiv r-base-core 276s r-cran-askpass r-cran-brio r-cran-callr r-cran-cli r-cran-codetools 276s r-cran-covr r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj 276s r-cran-digest r-cran-doparallel r-cran-evaluate r-cran-expm r-cran-fansi 276s r-cran-foreach r-cran-fs r-cran-glue r-cran-httr r-cran-iterators 276s r-cran-jsonlite r-cran-lattice r-cran-lazyeval r-cran-lifecycle 276s r-cran-littler r-cran-magrittr r-cran-matrix r-cran-mime r-cran-minqa 276s r-cran-msm r-cran-mvtnorm r-cran-numderiv r-cran-openssl r-cran-pillar 276s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 276s r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp 276s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-survival 276s r-cran-sys r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs 276s r-cran-waldo r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 277s 0 upgraded, 105 newly installed, 0 to remove and 0 not upgraded. 277s Need to get 68.2 MB/68.2 MB of archives. 277s After this operation, 134 MB of additional disk space will be used. 277s Get:1 /tmp/autopkgtest.kLYsOG/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [748 B] 277s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 277s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 277s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 277s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 277s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 277s Get:7 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 277s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 277s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 277s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 277s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 277s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 277s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 277s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 277s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 277s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 277s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 277s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 277s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 277s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 277s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 277s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 277s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 277s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 277s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 277s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 277s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 277s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 277s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 277s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 277s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 277s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 277s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 277s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 277s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 277s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 277s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 277s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 277s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 278s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 278s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 278s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 278s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 278s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 278s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 278s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 278s Get:47 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 278s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 278s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 278s Get:50 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 278s Get:51 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 278s Get:52 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 278s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 278s Get:54 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 278s Get:55 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 278s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 278s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 278s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 278s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 278s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 278s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 278s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 278s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 278s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 278s Get:65 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 278s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 278s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 278s Get:68 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 278s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 278s Get:70 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 278s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 278s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 278s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 278s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 278s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 279s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-doparallel all 1.0.17-1 [189 kB] 279s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 279s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 279s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 279s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-expm arm64 0.999-9-1 [217 kB] 279s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 279s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 279s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 279s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 279s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 279s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 279s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 279s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 279s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-minqa arm64 1.2.6-1 [107 kB] 279s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 279s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mvtnorm arm64 1.2-4-1 [723 kB] 279s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-msm arm64 1.7.1-1 [1463 kB] 279s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 279s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 279s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 279s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 279s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 279s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 279s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 279s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 279s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 279s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 279s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 279s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 279s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 280s Preconfiguring packages ... 280s Fetched 68.2 MB in 3s (21.7 MB/s) 280s Selecting previously unselected package fonts-dejavu-mono. 281s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74330 files and directories currently installed.) 281s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 281s Unpacking fonts-dejavu-mono (2.37-8) ... 281s Selecting previously unselected package fonts-dejavu-core. 281s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 281s Unpacking fonts-dejavu-core (2.37-8) ... 281s Selecting previously unselected package fontconfig-config. 281s Preparing to unpack .../002-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 281s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 281s Selecting previously unselected package libfontconfig1:arm64. 281s Preparing to unpack .../003-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 281s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 281s Selecting previously unselected package fontconfig. 281s Preparing to unpack .../004-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 281s Unpacking fontconfig (2.15.0-1ubuntu1) ... 281s Selecting previously unselected package fonts-glyphicons-halflings. 281s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 281s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 281s Selecting previously unselected package libblas3:arm64. 281s Preparing to unpack .../006-libblas3_3.12.0-3_arm64.deb ... 281s Unpacking libblas3:arm64 (3.12.0-3) ... 281s Selecting previously unselected package libpixman-1-0:arm64. 281s Preparing to unpack .../007-libpixman-1-0_0.42.2-1_arm64.deb ... 281s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 281s Selecting previously unselected package libxcb-render0:arm64. 281s Preparing to unpack .../008-libxcb-render0_1.15-1_arm64.deb ... 281s Unpacking libxcb-render0:arm64 (1.15-1) ... 281s Selecting previously unselected package libxcb-shm0:arm64. 281s Preparing to unpack .../009-libxcb-shm0_1.15-1_arm64.deb ... 281s Unpacking libxcb-shm0:arm64 (1.15-1) ... 281s Selecting previously unselected package libxrender1:arm64. 281s Preparing to unpack .../010-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 281s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 281s Selecting previously unselected package libcairo2:arm64. 281s Preparing to unpack .../011-libcairo2_1.18.0-1_arm64.deb ... 281s Unpacking libcairo2:arm64 (1.18.0-1) ... 281s Selecting previously unselected package libdatrie1:arm64. 281s Preparing to unpack .../012-libdatrie1_0.2.13-3_arm64.deb ... 281s Unpacking libdatrie1:arm64 (0.2.13-3) ... 281s Selecting previously unselected package libdeflate0:arm64. 281s Preparing to unpack .../013-libdeflate0_1.19-1_arm64.deb ... 281s Unpacking libdeflate0:arm64 (1.19-1) ... 281s Selecting previously unselected package libgfortran5:arm64. 281s Preparing to unpack .../014-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 281s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 281s Selecting previously unselected package libgomp1:arm64. 281s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 281s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 282s Selecting previously unselected package libgraphite2-3:arm64. 282s Preparing to unpack .../016-libgraphite2-3_1.3.14-2_arm64.deb ... 282s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 282s Selecting previously unselected package libharfbuzz0b:arm64. 282s Preparing to unpack .../017-libharfbuzz0b_8.3.0-2_arm64.deb ... 282s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 282s Selecting previously unselected package x11-common. 282s Preparing to unpack .../018-x11-common_1%3a7.7+23ubuntu2_all.deb ... 282s Unpacking x11-common (1:7.7+23ubuntu2) ... 282s Selecting previously unselected package libice6:arm64. 282s Preparing to unpack .../019-libice6_2%3a1.0.10-1build2_arm64.deb ... 282s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 282s Selecting previously unselected package libjpeg-turbo8:arm64. 282s Preparing to unpack .../020-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 282s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 282s Selecting previously unselected package libjpeg8:arm64. 282s Preparing to unpack .../021-libjpeg8_8c-2ubuntu11_arm64.deb ... 282s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 282s Selecting previously unselected package libjs-bootstrap. 282s Preparing to unpack .../022-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 282s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 282s Selecting previously unselected package liblapack3:arm64. 282s Preparing to unpack .../023-liblapack3_3.12.0-3_arm64.deb ... 282s Unpacking liblapack3:arm64 (3.12.0-3) ... 282s Selecting previously unselected package liblerc4:arm64. 282s Preparing to unpack .../024-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 282s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 282s Selecting previously unselected package libthai-data. 282s Preparing to unpack .../025-libthai-data_0.1.29-2_all.deb ... 282s Unpacking libthai-data (0.1.29-2) ... 282s Selecting previously unselected package libthai0:arm64. 282s Preparing to unpack .../026-libthai0_0.1.29-2_arm64.deb ... 282s Unpacking libthai0:arm64 (0.1.29-2) ... 282s Selecting previously unselected package libpango-1.0-0:arm64. 282s Preparing to unpack .../027-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 282s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 282s Selecting previously unselected package libpangoft2-1.0-0:arm64. 282s Preparing to unpack .../028-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 282s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 282s Selecting previously unselected package libpangocairo-1.0-0:arm64. 282s Preparing to unpack .../029-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 282s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 282s Selecting previously unselected package libpaper1:arm64. 282s Preparing to unpack .../030-libpaper1_1.1.29_arm64.deb ... 282s Unpacking libpaper1:arm64 (1.1.29) ... 282s Selecting previously unselected package libpaper-utils. 282s Preparing to unpack .../031-libpaper-utils_1.1.29_arm64.deb ... 282s Unpacking libpaper-utils (1.1.29) ... 282s Selecting previously unselected package libsharpyuv0:arm64. 282s Preparing to unpack .../032-libsharpyuv0_1.3.2-0.4_arm64.deb ... 282s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 282s Selecting previously unselected package libsm6:arm64. 282s Preparing to unpack .../033-libsm6_2%3a1.2.3-1build2_arm64.deb ... 282s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 282s Selecting previously unselected package libtcl8.6:arm64. 282s Preparing to unpack .../034-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 282s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 282s Selecting previously unselected package libjbig0:arm64. 282s Preparing to unpack .../035-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 282s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 282s Selecting previously unselected package libwebp7:arm64. 282s Preparing to unpack .../036-libwebp7_1.3.2-0.4_arm64.deb ... 282s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 282s Selecting previously unselected package libtiff6:arm64. 282s Preparing to unpack .../037-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 282s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 282s Selecting previously unselected package libxft2:arm64. 282s Preparing to unpack .../038-libxft2_2.3.6-1_arm64.deb ... 282s Unpacking libxft2:arm64 (2.3.6-1) ... 282s Selecting previously unselected package libxss1:arm64. 282s Preparing to unpack .../039-libxss1_1%3a1.2.3-1build2_arm64.deb ... 282s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 282s Selecting previously unselected package libtk8.6:arm64. 282s Preparing to unpack .../040-libtk8.6_8.6.13-2_arm64.deb ... 282s Unpacking libtk8.6:arm64 (8.6.13-2) ... 282s Selecting previously unselected package libxt6:arm64. 282s Preparing to unpack .../041-libxt6_1%3a1.2.1-1.1_arm64.deb ... 282s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 282s Selecting previously unselected package zip. 282s Preparing to unpack .../042-zip_3.0-13_arm64.deb ... 282s Unpacking zip (3.0-13) ... 282s Selecting previously unselected package unzip. 282s Preparing to unpack .../043-unzip_6.0-28ubuntu3_arm64.deb ... 282s Unpacking unzip (6.0-28ubuntu3) ... 282s Selecting previously unselected package xdg-utils. 283s Preparing to unpack .../044-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 283s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 283s Selecting previously unselected package r-base-core. 283s Preparing to unpack .../045-r-base-core_4.3.2-1build1_arm64.deb ... 283s Unpacking r-base-core (4.3.2-1build1) ... 283s Selecting previously unselected package r-cran-littler. 283s Preparing to unpack .../046-r-cran-littler_0.3.19-1_arm64.deb ... 283s Unpacking r-cran-littler (0.3.19-1) ... 283s Selecting previously unselected package littler. 283s Preparing to unpack .../047-littler_0.3.19-1_all.deb ... 283s Unpacking littler (0.3.19-1) ... 283s Selecting previously unselected package node-html5shiv. 283s Preparing to unpack .../048-node-html5shiv_3.7.3+dfsg-5_all.deb ... 283s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 283s Selecting previously unselected package r-cran-sys. 283s Preparing to unpack .../049-r-cran-sys_3.4.2-1_arm64.deb ... 283s Unpacking r-cran-sys (3.4.2-1) ... 283s Selecting previously unselected package r-cran-askpass. 283s Preparing to unpack .../050-r-cran-askpass_1.2.0-1_arm64.deb ... 283s Unpacking r-cran-askpass (1.2.0-1) ... 283s Selecting previously unselected package r-cran-brio. 283s Preparing to unpack .../051-r-cran-brio_1.1.4-1_arm64.deb ... 283s Unpacking r-cran-brio (1.1.4-1) ... 283s Selecting previously unselected package r-cran-ps. 283s Preparing to unpack .../052-r-cran-ps_1.7.6-1_arm64.deb ... 283s Unpacking r-cran-ps (1.7.6-1) ... 283s Selecting previously unselected package r-cran-r6. 283s Preparing to unpack .../053-r-cran-r6_2.5.1-1_all.deb ... 283s Unpacking r-cran-r6 (2.5.1-1) ... 283s Selecting previously unselected package r-cran-processx. 283s Preparing to unpack .../054-r-cran-processx_3.8.3-1_arm64.deb ... 283s Unpacking r-cran-processx (3.8.3-1) ... 283s Selecting previously unselected package r-cran-callr. 283s Preparing to unpack .../055-r-cran-callr_3.7.3-2_all.deb ... 283s Unpacking r-cran-callr (3.7.3-2) ... 283s Selecting previously unselected package r-cran-cli. 283s Preparing to unpack .../056-r-cran-cli_3.6.2-1_arm64.deb ... 283s Unpacking r-cran-cli (3.6.2-1) ... 283s Selecting previously unselected package r-cran-codetools. 283s Preparing to unpack .../057-r-cran-codetools_0.2-19-1_all.deb ... 283s Unpacking r-cran-codetools (0.2-19-1) ... 283s Selecting previously unselected package r-cran-digest. 283s Preparing to unpack .../058-r-cran-digest_0.6.34-1_arm64.deb ... 283s Unpacking r-cran-digest (0.6.34-1) ... 283s Selecting previously unselected package r-cran-jsonlite. 283s Preparing to unpack .../059-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 283s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 283s Selecting previously unselected package r-cran-lazyeval. 283s Preparing to unpack .../060-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 283s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 283s Selecting previously unselected package r-cran-rex. 283s Preparing to unpack .../061-r-cran-rex_1.2.1-1_all.deb ... 283s Unpacking r-cran-rex (1.2.1-1) ... 283s Selecting previously unselected package r-cran-curl. 283s Preparing to unpack .../062-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 283s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 283s Selecting previously unselected package r-cran-mime. 283s Preparing to unpack .../063-r-cran-mime_0.12-1_arm64.deb ... 283s Unpacking r-cran-mime (0.12-1) ... 283s Selecting previously unselected package r-cran-openssl. 283s Preparing to unpack .../064-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 283s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 284s Selecting previously unselected package r-cran-httr. 284s Preparing to unpack .../065-r-cran-httr_1.4.7+dfsg-1_all.deb ... 284s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 284s Selecting previously unselected package r-cran-crayon. 284s Preparing to unpack .../066-r-cran-crayon_1.5.2-1_all.deb ... 284s Unpacking r-cran-crayon (1.5.2-1) ... 284s Selecting previously unselected package r-cran-withr. 284s Preparing to unpack .../067-r-cran-withr_2.5.0-1_all.deb ... 284s Unpacking r-cran-withr (2.5.0-1) ... 284s Selecting previously unselected package r-cran-yaml. 284s Preparing to unpack .../068-r-cran-yaml_2.3.8-1_arm64.deb ... 284s Unpacking r-cran-yaml (2.3.8-1) ... 284s Selecting previously unselected package r-cran-covr. 284s Preparing to unpack .../069-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 284s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 284s Selecting previously unselected package r-cran-desc. 284s Preparing to unpack .../070-r-cran-desc_1.4.3-1_all.deb ... 284s Unpacking r-cran-desc (1.4.3-1) ... 284s Selecting previously unselected package r-cran-diffobj. 284s Preparing to unpack .../071-r-cran-diffobj_0.3.5-1_arm64.deb ... 284s Unpacking r-cran-diffobj (0.3.5-1) ... 284s Selecting previously unselected package r-cran-iterators. 284s Preparing to unpack .../072-r-cran-iterators_1.0.14-1_all.deb ... 284s Unpacking r-cran-iterators (1.0.14-1) ... 284s Selecting previously unselected package r-cran-foreach. 284s Preparing to unpack .../073-r-cran-foreach_1.5.2-1_all.deb ... 284s Unpacking r-cran-foreach (1.5.2-1) ... 284s Selecting previously unselected package r-cran-doparallel. 284s Preparing to unpack .../074-r-cran-doparallel_1.0.17-1_all.deb ... 284s Unpacking r-cran-doparallel (1.0.17-1) ... 284s Selecting previously unselected package r-cran-evaluate. 284s Preparing to unpack .../075-r-cran-evaluate_0.23-1_all.deb ... 284s Unpacking r-cran-evaluate (0.23-1) ... 284s Selecting previously unselected package r-cran-lattice. 284s Preparing to unpack .../076-r-cran-lattice_0.22-5-1_arm64.deb ... 284s Unpacking r-cran-lattice (0.22-5-1) ... 284s Selecting previously unselected package r-cran-matrix. 284s Preparing to unpack .../077-r-cran-matrix_1.6-5-1_arm64.deb ... 284s Unpacking r-cran-matrix (1.6-5-1) ... 284s Selecting previously unselected package r-cran-expm. 284s Preparing to unpack .../078-r-cran-expm_0.999-9-1_arm64.deb ... 284s Unpacking r-cran-expm (0.999-9-1) ... 284s Selecting previously unselected package r-cran-fansi. 284s Preparing to unpack .../079-r-cran-fansi_1.0.5-1_arm64.deb ... 284s Unpacking r-cran-fansi (1.0.5-1) ... 284s Selecting previously unselected package r-cran-fs. 284s Preparing to unpack .../080-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 284s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 284s Selecting previously unselected package r-cran-glue. 284s Preparing to unpack .../081-r-cran-glue_1.7.0-1_arm64.deb ... 284s Unpacking r-cran-glue (1.7.0-1) ... 284s Selecting previously unselected package r-cran-rlang. 284s Preparing to unpack .../082-r-cran-rlang_1.1.3-1_arm64.deb ... 284s Unpacking r-cran-rlang (1.1.3-1) ... 285s Selecting previously unselected package r-cran-lifecycle. 285s Preparing to unpack .../083-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 285s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 285s Selecting previously unselected package r-cran-magrittr. 285s Preparing to unpack .../084-r-cran-magrittr_2.0.3-1_arm64.deb ... 285s Unpacking r-cran-magrittr (2.0.3-1) ... 285s Selecting previously unselected package r-cran-pkgkitten. 285s Preparing to unpack .../085-r-cran-pkgkitten_0.2.3-1_all.deb ... 285s Unpacking r-cran-pkgkitten (0.2.3-1) ... 285s Selecting previously unselected package r-cran-rcpp. 285s Preparing to unpack .../086-r-cran-rcpp_1.0.12-1_arm64.deb ... 285s Unpacking r-cran-rcpp (1.0.12-1) ... 285s Selecting previously unselected package r-cran-minqa. 285s Preparing to unpack .../087-r-cran-minqa_1.2.6-1_arm64.deb ... 285s Unpacking r-cran-minqa (1.2.6-1) ... 285s Selecting previously unselected package r-cran-survival. 285s Preparing to unpack .../088-r-cran-survival_3.5-8-1_arm64.deb ... 285s Unpacking r-cran-survival (3.5-8-1) ... 285s Selecting previously unselected package r-cran-mvtnorm. 285s Preparing to unpack .../089-r-cran-mvtnorm_1.2-4-1_arm64.deb ... 285s Unpacking r-cran-mvtnorm (1.2-4-1) ... 285s Selecting previously unselected package r-cran-msm. 285s Preparing to unpack .../090-r-cran-msm_1.7.1-1_arm64.deb ... 285s Unpacking r-cran-msm (1.7.1-1) ... 285s Selecting previously unselected package r-cran-numderiv. 285s Preparing to unpack .../091-r-cran-numderiv_2016.8-1.1-3_all.deb ... 285s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 285s Selecting previously unselected package r-cran-utf8. 285s Preparing to unpack .../092-r-cran-utf8_1.2.4-1_arm64.deb ... 285s Unpacking r-cran-utf8 (1.2.4-1) ... 285s Selecting previously unselected package r-cran-vctrs. 285s Preparing to unpack .../093-r-cran-vctrs_0.6.5-1_arm64.deb ... 285s Unpacking r-cran-vctrs (0.6.5-1) ... 285s Selecting previously unselected package r-cran-pillar. 285s Preparing to unpack .../094-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 285s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 285s Selecting previously unselected package r-cran-pkgbuild. 285s Preparing to unpack .../095-r-cran-pkgbuild_1.4.3-1_all.deb ... 285s Unpacking r-cran-pkgbuild (1.4.3-1) ... 285s Selecting previously unselected package r-cran-pkgconfig. 285s Preparing to unpack .../096-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 285s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 285s Selecting previously unselected package r-cran-rprojroot. 285s Preparing to unpack .../097-r-cran-rprojroot_2.0.4-1_all.deb ... 285s Unpacking r-cran-rprojroot (2.0.4-1) ... 285s Selecting previously unselected package r-cran-pkgload. 285s Preparing to unpack .../098-r-cran-pkgload_1.3.4-1_all.deb ... 285s Unpacking r-cran-pkgload (1.3.4-1) ... 285s Selecting previously unselected package r-cran-praise. 285s Preparing to unpack .../099-r-cran-praise_1.0.0-4build1_all.deb ... 285s Unpacking r-cran-praise (1.0.0-4build1) ... 285s Selecting previously unselected package r-cran-tibble. 286s Preparing to unpack .../100-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 286s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 286s Selecting previously unselected package r-cran-rematch2. 286s Preparing to unpack .../101-r-cran-rematch2_2.1.2-2build1_all.deb ... 286s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 286s Selecting previously unselected package r-cran-waldo. 286s Preparing to unpack .../102-r-cran-waldo_0.5.2-1build1_all.deb ... 286s Unpacking r-cran-waldo (0.5.2-1build1) ... 286s Selecting previously unselected package r-cran-testthat. 286s Preparing to unpack .../103-r-cran-testthat_3.2.1-1_arm64.deb ... 286s Unpacking r-cran-testthat (3.2.1-1) ... 286s Selecting previously unselected package autopkgtest-satdep. 286s Preparing to unpack .../104-1-autopkgtest-satdep.deb ... 286s Unpacking autopkgtest-satdep (0) ... 286s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 286s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 286s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 286s Setting up libpaper1:arm64 (1.1.29) ... 286s 286s Creating config file /etc/papersize with new version 286s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 286s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 286s Setting up libdatrie1:arm64 (0.2.13-3) ... 286s Setting up libxcb-render0:arm64 (1.15-1) ... 286s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 286s Setting up unzip (6.0-28ubuntu3) ... 286s Setting up x11-common (1:7.7+23ubuntu2) ... 287s Setting up node-html5shiv (3.7.3+dfsg-5) ... 287s Setting up libdeflate0:arm64 (1.19-1) ... 287s Setting up libxcb-shm0:arm64 (1.15-1) ... 287s Setting up libpaper-utils (1.1.29) ... 287s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 287s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 287s Setting up zip (3.0-13) ... 287s Setting up libblas3:arm64 (3.12.0-3) ... 287s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 287s Setting up fonts-dejavu-mono (2.37-8) ... 287s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 287s Setting up fonts-dejavu-core (2.37-8) ... 287s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 287s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 287s Setting up libwebp7:arm64 (1.3.2-0.4) ... 287s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 287s Setting up libthai-data (0.1.29-2) ... 287s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 287s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 287s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 287s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 287s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 287s Setting up libice6:arm64 (2:1.0.10-1build2) ... 287s Setting up liblapack3:arm64 (3.12.0-3) ... 287s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 287s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 287s Setting up libthai0:arm64 (0.1.29-2) ... 287s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 287s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 287s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 287s Setting up fontconfig (2.15.0-1ubuntu1) ... 289s Regenerating fonts cache... done. 289s Setting up libxft2:arm64 (2.3.6-1) ... 289s Setting up libtk8.6:arm64 (8.6.13-2) ... 289s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 289s Setting up libcairo2:arm64 (1.18.0-1) ... 289s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 289s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 289s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 289s Setting up r-base-core (4.3.2-1build1) ... 289s 289s Creating config file /etc/R/Renviron with new version 289s Setting up r-cran-crayon (1.5.2-1) ... 289s Setting up r-cran-lattice (0.22-5-1) ... 289s Setting up r-cran-ps (1.7.6-1) ... 289s Setting up r-cran-lazyeval (0.2.2-1build1) ... 289s Setting up r-cran-r6 (2.5.1-1) ... 289s Setting up r-cran-pkgkitten (0.2.3-1) ... 289s Setting up r-cran-numderiv (2016.8-1.1-3) ... 289s Setting up r-cran-magrittr (2.0.3-1) ... 289s Setting up r-cran-littler (0.3.19-1) ... 289s Setting up r-cran-fs (1.6.3+dfsg-1) ... 289s Setting up r-cran-rcpp (1.0.12-1) ... 289s Setting up r-cran-curl (5.2.0+dfsg-1) ... 289s Setting up r-cran-codetools (0.2-19-1) ... 289s Setting up r-cran-brio (1.1.4-1) ... 289s Setting up r-cran-diffobj (0.3.5-1) ... 289s Setting up r-cran-rlang (1.1.3-1) ... 289s Setting up littler (0.3.19-1) ... 289s Setting up r-cran-sys (3.4.2-1) ... 289s Setting up r-cran-withr (2.5.0-1) ... 289s Setting up r-cran-processx (3.8.3-1) ... 289s Setting up r-cran-mime (0.12-1) ... 289s Setting up r-cran-praise (1.0.0-4build1) ... 289s Setting up r-cran-iterators (1.0.14-1) ... 289s Setting up r-cran-digest (0.6.34-1) ... 289s Setting up r-cran-yaml (2.3.8-1) ... 289s Setting up r-cran-evaluate (0.23-1) ... 289s Setting up r-cran-foreach (1.5.2-1) ... 289s Setting up r-cran-fansi (1.0.5-1) ... 289s Setting up r-cran-glue (1.7.0-1) ... 289s Setting up r-cran-cli (3.6.2-1) ... 289s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 289s Setting up r-cran-rprojroot (2.0.4-1) ... 289s Setting up r-cran-askpass (1.2.0-1) ... 289s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 289s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 289s Setting up r-cran-utf8 (1.2.4-1) ... 289s Setting up r-cran-rex (1.2.1-1) ... 289s Setting up r-cran-mvtnorm (1.2-4-1) ... 289s Setting up r-cran-matrix (1.6-5-1) ... 289s Setting up r-cran-doparallel (1.0.17-1) ... 289s Setting up r-cran-vctrs (0.6.5-1) ... 289s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 289s Setting up r-cran-minqa (1.2.6-1) ... 289s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 289s Setting up r-cran-callr (3.7.3-2) ... 289s Setting up r-cran-desc (1.4.3-1) ... 289s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 289s Setting up r-cran-survival (3.5-8-1) ... 289s Setting up r-cran-expm (0.999-9-1) ... 289s Setting up r-cran-httr (1.4.7+dfsg-1) ... 289s Setting up r-cran-covr (3.6.4+dfsg-1) ... 289s Setting up r-cran-pkgbuild (1.4.3-1) ... 289s Setting up r-cran-pkgload (1.3.4-1) ... 289s Setting up r-cran-rematch2 (2.1.2-2build1) ... 289s Setting up r-cran-msm (1.7.1-1) ... 289s Setting up r-cran-waldo (0.5.2-1build1) ... 289s Setting up r-cran-testthat (3.2.1-1) ... 289s Setting up autopkgtest-satdep (0) ... 289s Processing triggers for man-db (2.12.0-3) ... 290s Processing triggers for install-info (7.1-3) ... 290s Processing triggers for libc-bin (2.39-0ubuntu2) ... 297s (Reading database ... 82306 files and directories currently installed.) 297s Removing autopkgtest-satdep (0) ... 297s autopkgtest [19:24:06]: test run-unit-test: [----------------------- 298s 298s R version 4.3.2 (2023-10-31) -- "Eye Holes" 298s Copyright (C) 2023 The R Foundation for Statistical Computing 298s Platform: aarch64-unknown-linux-gnu (64-bit) 298s 298s R is free software and comes with ABSOLUTELY NO WARRANTY. 298s You are welcome to redistribute it under certain conditions. 298s Type 'license()' or 'licence()' for distribution details. 298s 298s R is a collaborative project with many contributors. 298s Type 'contributors()' for more information and 298s 'citation()' on how to cite R or R packages in publications. 298s 298s Type 'demo()' for some demos, 'help()' for on-line help, or 298s 'help.start()' for an HTML browser interface to help. 298s Type 'q()' to quit R. 298s 298s > library(testthat) 298s > test_check("msm") 298s Loading required package: msm 302s Error in stat(res) : Error 302s Error in solve.default(0.5 * hess) : 302s system is computationally singular: reciprocal condition number = 9.93401e-17 302s Error in stat(res) : Error 311s 311s Call: 311s msm(formula = fev ~ days, subject = ptnum, data = fev[1:500, ], qmatrix = three.q, hmodel = hmodel1, hcovariates = list(~acute, ~acute, NULL), hcovinits = list(-8, -8, NULL), hconstraint = list(acute = c(1, 1)), death = 3, center = FALSE) 311s 311s Maximum likelihood estimates 311s Baselines are with covariates set to 0 311s 311s Transition intensities 311s Baseline 311s State 1 - State 1 -6.381e-04 (-1.276e-03,-3.192e-04) 311s State 1 - State 2 6.373e-04 ( 3.183e-04, 1.276e-03) 311s State 1 - State 3 8.440e-07 ( 3.375e-21, 2.111e+08) 311s State 2 - State 2 -8.299e-04 (-1.749e-03,-3.938e-04) 311s State 2 - State 3 8.299e-04 ( 3.938e-04, 1.749e-03) 311s 311s Hidden Markov model, 3 states 311s State 1 - normal distribution 311s Parameters: 311s Estimate LCL UCL 311s mean 106.234293 103.83878 108.629802 311s sd 17.066749 15.54712 18.734914 311s acute -6.993605 -10.10295 -3.884258 311s 311s State 2 - normal distribution 311s Parameters: 311s Estimate LCL UCL 311s mean 63.790749 61.40091 66.180592 311s sd 14.166004 12.98525 15.454123 311s acute -6.993605 -10.10295 -3.884258 311s 311s State 3 - identity distribution 311s Parameters: 311s Estimate LCL UCL 311s which 999 NA NA 311s 311s 311s -2 * log-likelihood: 4269.772 311s Hidden Markov model binomial distribution 311s 311s Parameters: size = 40, prob = 0.2 311s Multivariate hidden Markov model with 2 outcomes: 311s Hidden Markov model binomial distribution 311s 311s Parameters: size = 40, prob = 0.3 311s Hidden Markov model binomial distribution 311s 311s Parameters: size = 40, prob = 0.3 312s 312s Call: 312s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = oneway4.q, ematrix = ematrix, deathexact = 4, fixedpars = TRUE) 312s 312s 312s -2 * log-likelihood: 4296.916 314s 314s Call: 314s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = oneway4.q, ematrix = ematrix, initprobs = c(0.8, 0.1, 0.1, 0), est.initprobs = TRUE, deathexact = 4, fixedpars = 1:9, method = "BFGS", control = list(fnscale = 4000, maxit = 10000)) 314s 314s Maximum likelihood estimates 314s 314s Transition intensities 314s Baseline 314s Well - Well -0.1651 314s Well - Mild 0.1480 314s Well - Death 0.0171 314s Mild - Mild -0.2830 314s Mild - Severe 0.2020 314s Mild - Death 0.0810 314s Severe - Severe -0.1260 (-0.126,-0.126) 314s Severe - Death 0.1260 314s 314s Misclassification probabilities 314s Baseline 314s Obs Well | Well 0.9 (0.9,0.9) 314s Obs Mild | Well 0.1 314s Obs Well | Mild 0.1 314s Obs Mild | Mild 0.8 314s Obs Severe | Mild 0.1 314s Obs Mild | Severe 0.1 314s Obs Severe | Severe 0.9 (0.9,0.9) 314s 314s Initial state occupancy probabilities 314s Estimate LCL UCL 314s State 1 0.9995418040 8.909606e-01 0.99998008 314s State 2 0.0001849772 4.097837e-07 0.07836076 314s State 3 0.0002732188 2.500337e-06 0.03221896 314s State 4 0.0000000000 0.000000e+00 0.00000000 314s 314s -2 * log-likelihood: 4297.466 314s 314s Observed numbers of individuals occupying states at each time 314s 314s State 1 State 2 State 3 State 4 Total 314s 0 622 0 0 0 622 314s 1.94602739726027 537 4 5 54 600 314s 3.89205479452054 356 35 24 87 502 314s 5.83808219178081 208 41 28 127 404 314s 7.78410958904108 122 44 27 158 351 314s 9.73013698630135 71 25 22 187 305 314s 11.6761643835616 31 11 13 218 273 314s 13.6221917808219 12 6 5 236 259 314s 15.5682191780822 5 1 3 244 253 314s 17.5142465753424 1 0 2 249 252 314s 19.4602739726027 0 0 0 251 251 314s 314s Expected numbers of individuals occupying states at each time 314s 314s Well Mild Severe Death Total 314s 0 454.060000 105.74000 62.20000 0.00000 622 314s 1.94602739726027 325.710210 142.31588 85.87563 46.09828 600 314s 3.89205479452054 201.519656 121.76444 94.55263 84.16327 502 314s 5.83808219178081 119.419915 89.03744 88.74180 106.80084 404 314s 7.78410958904108 76.147715 66.14910 82.14786 126.55532 351 314s 9.73013698630135 48.439143 47.43163 71.31882 137.81040 305 314s 11.6761643835616 31.676873 34.25326 60.87352 146.19635 273 314s 13.6221917808219 21.922294 25.83213 53.18927 158.05631 259 314s 15.5682191780822 15.602058 19.85855 46.59544 170.94396 253 314s 17.5142465753424 11.311456 15.46051 40.76362 184.46441 252 314s 19.4602739726027 8.194417 11.98037 35.07316 195.75205 251 314s 314s Observed prevalences of states (percentages of population at risk) 314s 314s State 1 State 2 State 3 State 4 314s 0 100.0000000 0.0000000 0.0000000 0.00000 314s 1.94602739726027 89.5000000 0.6666667 0.8333333 9.00000 314s 3.89205479452054 70.9163347 6.9721116 4.7808765 17.33068 314s 5.83808219178081 51.4851485 10.1485149 6.9306931 31.43564 314s 7.78410958904108 34.7578348 12.5356125 7.6923077 45.01425 314s 9.73013698630135 23.2786885 8.1967213 7.2131148 61.31148 314s 11.6761643835616 11.3553114 4.0293040 4.7619048 79.85348 314s 13.6221917808219 4.6332046 2.3166023 1.9305019 91.11969 314s 15.5682191780822 1.9762846 0.3952569 1.1857708 96.44269 314s 17.5142465753424 0.3968254 0.0000000 0.7936508 98.80952 314s 19.4602739726027 0.0000000 0.0000000 0.0000000 100.00000 314s 314s Expected prevalences of states (percentages of population at risk) 314s 314s Well Mild Severe Death 314s 0 73.000000 17.000000 10.00000 0.000000 314s 1.94602739726027 54.285035 23.719313 14.31260 7.683047 314s 3.89205479452054 40.143358 24.255864 18.83519 16.765592 314s 5.83808219178081 29.559385 22.038971 21.96579 26.435852 314s 7.78410958904108 21.694506 18.845898 23.40395 36.055648 314s 9.73013698630135 15.881686 15.551355 23.38322 45.183739 314s 11.6761643835616 11.603250 12.546980 22.29799 53.551777 314s 13.6221917808219 8.464206 9.973795 20.53640 61.025602 314s 15.5682191780822 6.166821 7.849229 18.41717 67.566782 314s 17.5142465753424 4.488673 6.135124 16.17604 73.200163 314s 19.4602739726027 3.264708 4.773057 13.97337 77.988863 315s 315s Call: 315s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = twoway4.q, deathexact = TRUE, fixedpars = TRUE, method = "BFGS", control = list(trace = 5, REPORT = 1)) 315s 315s 315s -2 * log-likelihood: 4908.817 315s 315s Call: 315s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = twoway4.q, deathexact = TRUE, fixedpars = TRUE, method = "BFGS", control = list(trace = 5, REPORT = 1)) 315s 315s -2 * log-likelihood: 4908.817 316s 316s Call: 316s msm(formula = state ~ months, subject = ptnum, data = psor, qmatrix = psor.q, covariates = ~ollwsdrt + hieffusn, constraint = list(hieffusn = c(1, 1, 1), ollwsdrt = c(1, 1, 2)), control = list(fnscale = 1)) 316s 316s Maximum likelihood estimates 316s Baselines are with covariates set to their means 316s 316s Transition intensities with hazard ratios for each covariate 316s Baseline ollwsdrt 316s State 1 - State 1 -0.09594 (-0.1216,-0.0757) 316s State 1 - State 2 0.09594 ( 0.0757, 0.1216) 0.5652 (0.3853,0.829) 316s State 2 - State 2 -0.16431 (-0.2076,-0.1300) 316s State 2 - State 3 0.16431 ( 0.1300, 0.2076) 0.5652 (0.3853,0.829) 316s State 3 - State 3 -0.25438 (-0.3396,-0.1905) 316s State 3 - State 4 0.25438 ( 0.1905, 0.3396) 1.6408 (0.8154,3.302) 316s hieffusn 316s State 1 - State 1 316s State 1 - State 2 1.646 (1.148,2.359) 316s State 2 - State 2 316s State 2 - State 3 1.646 (1.148,2.359) 316s State 3 - State 3 316s State 3 - State 4 1.646 (1.148,2.359) 316s 316s -2 * log-likelihood: 1114.899 316s 316s Call: 316s msm(formula = state ~ months, subject = ptnum, data = psor, qmatrix = psor.q, covariates = ~ollwsdrt + hieffusn, constraint = list(hieffusn = c(1, 1, 1), ollwsdrt = c(1, 1, 2)), control = list(fnscale = 1)) 316s 316s Maximum likelihood estimates: 316s Transition intensity matrix with covariates set to their means 316s 316s State 1 State 2 316s State 1 -0.09594 (-0.1216,-0.0757) 0.09594 ( 0.0757, 0.1216) 316s State 2 0 -0.16431 (-0.2076,-0.1300) 316s State 3 0 0 316s State 4 0 0 316s State 3 State 4 316s State 1 0 0 316s State 2 0.16431 ( 0.1300, 0.2076) 0 316s State 3 -0.25438 (-0.3396,-0.1905) 0.25438 ( 0.1905, 0.3396) 316s State 4 0 0 316s 316s Log-linear effects of ollwsdrt 316s 316s State 1 State 2 State 3 316s State 1 0 -0.5706 (-0.9536,-0.1876) 0 316s State 2 0 0 -0.5706 (-0.9536,-0.1876) 316s State 3 0 0 0 316s State 4 0 0 0 316s State 4 316s State 1 0 316s State 2 0 316s State 3 0.4952 (-0.2041, 1.1944) 316s State 4 0 316s 316s Log-linear effects of hieffusn 316s 316s State 1 State 2 State 3 316s State 1 0 0.4983 (0.1383,0.8584) 0 316s State 2 0 0 0.4983 (0.1383,0.8584) 316s State 3 0 0 0 316s State 4 0 0 0 316s State 4 316s State 1 0 316s State 2 0 316s State 3 0.4983 (0.1383,0.8584) 316s State 4 0 316s 316s -2 * log-likelihood: 1114.899 331s State 1 State 2 331s State 1 -0.09594 (-0.1216,-0.0757) 0.09594 ( 0.0757, 0.1216) 331s State 2 0 -0.16431 (-0.2076,-0.1300) 331s State 3 0 0 331s State 4 0 0 331s State 3 State 4 331s State 1 0 0 331s State 2 0.16431 ( 0.1300, 0.2076) 0 331s State 3 -0.25438 (-0.3396,-0.1905) 0.25438 ( 0.1905, 0.3396) 331s State 4 0 0 333s Imputing sampling times after deaths... 333s Calculating replicates of test statistics for imputations... 335s [ FAIL 0 | WARN 0 | SKIP 4 | PASS 547 ] 335s 335s ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ 335s • On CRAN (4): 'test_draic.r:25:3', 'test_models_hmm.r:186:3', 335s 'test_models.r:781:3', 'test_phase.R:9:3' 335s 335s [ FAIL 0 | WARN 0 | SKIP 4 | PASS 547 ] 336s > 336s autopkgtest [19:24:45]: test run-unit-test: -----------------------] 337s autopkgtest [19:24:46]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 337s run-unit-test PASS 337s autopkgtest [19:24:46]: test pkg-r-autopkgtest: preparing testbed 339s Reading package lists... 339s Building dependency tree... 339s Reading state information... 340s Starting pkgProblemResolver with broken count: 0 340s Starting 2 pkgProblemResolver with broken count: 0 340s Done 340s The following additional packages will be installed: 340s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 340s dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 340s gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 340s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 340s libasan8 libatomic1 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 340s libcrypt-dev libgcc-13-dev libgfortran-13-dev libhwasan0 libicu-dev libisl23 340s libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 340s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0 340s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev 340s libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config 340s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev 342s Suggested packages: 342s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 342s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 342s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 342s liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc 342s libstdc++-13-doc texlive-base texlive-latex-base texlive-plain-generic 342s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 342s texlive-latex-recommended texlive-latex-extra texinfo 342s Recommended packages: 342s bzip2-doc manpages manpages-dev libc-devtools libpng-tools 342s The following NEW packages will be installed: 342s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 342s cpp-aarch64-linux-gnu dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu 342s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 342s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 342s gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev 342s libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev 342s libgfortran-13-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 342s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 342s libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev 342s libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev 342s libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config pkg-r-autopkgtest 342s pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev 342s 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded. 342s Need to get 92.9 MB/92.9 MB of archives. 342s After this operation, 343 MB of additional disk space will be used. 342s Get:1 /tmp/autopkgtest.kLYsOG/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [756 B] 342s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 342s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 342s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 342s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 342s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 342s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 342s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 342s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 342s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 342s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 342s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 342s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 342s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 342s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 342s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 342s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 342s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 342s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 342s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 342s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 342s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 342s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 342s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 342s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 342s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 342s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 342s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 342s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 342s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 342s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 342s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 342s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 342s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 342s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 342s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 343s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 343s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 343s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 343s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 343s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 343s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 343s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 343s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 343s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 343s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 343s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 343s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 343s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 343s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 343s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 343s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 343s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 343s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 343s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 343s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 343s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 343s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 343s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 343s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 343s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 343s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 344s Fetched 92.9 MB in 3s (34.1 MB/s) 344s Selecting previously unselected package libc-dev-bin. 344s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82306 files and directories currently installed.) 344s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 344s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 344s Selecting previously unselected package linux-libc-dev:arm64. 344s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_arm64.deb ... 344s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 344s Selecting previously unselected package libcrypt-dev:arm64. 344s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 344s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 344s Selecting previously unselected package libtirpc-dev:arm64. 344s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 344s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 344s Selecting previously unselected package libnsl-dev:arm64. 344s Preparing to unpack .../04-libnsl-dev_1.3.0-3_arm64.deb ... 344s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 344s Selecting previously unselected package rpcsvc-proto. 344s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 344s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 344s Selecting previously unselected package libc6-dev:arm64. 344s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_arm64.deb ... 344s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 344s Selecting previously unselected package libisl23:arm64. 344s Preparing to unpack .../07-libisl23_0.26-3_arm64.deb ... 344s Unpacking libisl23:arm64 (0.26-3) ... 344s Selecting previously unselected package libmpc3:arm64. 344s Preparing to unpack .../08-libmpc3_1.3.1-1_arm64.deb ... 344s Unpacking libmpc3:arm64 (1.3.1-1) ... 344s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 344s Preparing to unpack .../09-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 344s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 344s Selecting previously unselected package cpp-13. 344s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 344s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 344s Selecting previously unselected package cpp-aarch64-linux-gnu. 344s Preparing to unpack .../11-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 344s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 344s Selecting previously unselected package cpp. 344s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 344s Unpacking cpp (4:13.2.0-7ubuntu1) ... 344s Selecting previously unselected package libcc1-0:arm64. 344s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 344s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 344s Selecting previously unselected package libitm1:arm64. 344s Preparing to unpack .../14-libitm1_14-20240303-1ubuntu1_arm64.deb ... 344s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 344s Selecting previously unselected package libatomic1:arm64. 344s Preparing to unpack .../15-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 344s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 344s Selecting previously unselected package libasan8:arm64. 344s Preparing to unpack .../16-libasan8_14-20240303-1ubuntu1_arm64.deb ... 344s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 345s Selecting previously unselected package liblsan0:arm64. 345s Preparing to unpack .../17-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 345s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 345s Selecting previously unselected package libtsan2:arm64. 345s Preparing to unpack .../18-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 345s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 345s Selecting previously unselected package libubsan1:arm64. 345s Preparing to unpack .../19-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 345s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 345s Selecting previously unselected package libhwasan0:arm64. 345s Preparing to unpack .../20-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 345s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 345s Selecting previously unselected package libgcc-13-dev:arm64. 345s Preparing to unpack .../21-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 345s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 345s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 345s Preparing to unpack .../22-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 345s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 345s Selecting previously unselected package gcc-13. 345s Preparing to unpack .../23-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 345s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 345s Selecting previously unselected package gcc-aarch64-linux-gnu. 345s Preparing to unpack .../24-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 345s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 345s Selecting previously unselected package gcc. 345s Preparing to unpack .../25-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 345s Unpacking gcc (4:13.2.0-7ubuntu1) ... 345s Selecting previously unselected package libstdc++-13-dev:arm64. 345s Preparing to unpack .../26-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 345s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 345s Selecting previously unselected package g++-13-aarch64-linux-gnu. 345s Preparing to unpack .../27-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 345s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 346s Selecting previously unselected package g++-13. 346s Preparing to unpack .../28-g++-13_13.2.0-17ubuntu2_arm64.deb ... 346s Unpacking g++-13 (13.2.0-17ubuntu2) ... 346s Selecting previously unselected package g++-aarch64-linux-gnu. 346s Preparing to unpack .../29-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 346s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 346s Selecting previously unselected package g++. 346s Preparing to unpack .../30-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 346s Unpacking g++ (4:13.2.0-7ubuntu1) ... 346s Selecting previously unselected package build-essential. 346s Preparing to unpack .../31-build-essential_12.10ubuntu1_arm64.deb ... 346s Unpacking build-essential (12.10ubuntu1) ... 346s Selecting previously unselected package dctrl-tools. 346s Preparing to unpack .../32-dctrl-tools_2.24-3build2_arm64.deb ... 346s Unpacking dctrl-tools (2.24-3build2) ... 346s Selecting previously unselected package libgfortran-13-dev:arm64. 346s Preparing to unpack .../33-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 346s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 346s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 346s Preparing to unpack .../34-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 346s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 346s Selecting previously unselected package gfortran-13. 346s Preparing to unpack .../35-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 346s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 346s Selecting previously unselected package gfortran-aarch64-linux-gnu. 346s Preparing to unpack .../36-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 346s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 346s Selecting previously unselected package gfortran. 346s Preparing to unpack .../37-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 346s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 346s Selecting previously unselected package icu-devtools. 346s Preparing to unpack .../38-icu-devtools_74.2-1ubuntu1_arm64.deb ... 346s Unpacking icu-devtools (74.2-1ubuntu1) ... 346s Selecting previously unselected package libblas-dev:arm64. 346s Preparing to unpack .../39-libblas-dev_3.12.0-3_arm64.deb ... 346s Unpacking libblas-dev:arm64 (3.12.0-3) ... 346s Selecting previously unselected package libbz2-dev:arm64. 346s Preparing to unpack .../40-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 346s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 346s Selecting previously unselected package libicu-dev:arm64. 346s Preparing to unpack .../41-libicu-dev_74.2-1ubuntu1_arm64.deb ... 346s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 347s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 347s Preparing to unpack .../42-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 347s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 347s Selecting previously unselected package libjpeg8-dev:arm64. 347s Preparing to unpack .../43-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 347s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 347s Selecting previously unselected package libjpeg-dev:arm64. 347s Preparing to unpack .../44-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 347s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 347s Selecting previously unselected package liblapack-dev:arm64. 347s Preparing to unpack .../45-liblapack-dev_3.12.0-3_arm64.deb ... 347s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 347s Selecting previously unselected package libncurses-dev:arm64. 347s Preparing to unpack .../46-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 347s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 347s Selecting previously unselected package libpcre2-16-0:arm64. 347s Preparing to unpack .../47-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 347s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 347s Selecting previously unselected package libpcre2-32-0:arm64. 347s Preparing to unpack .../48-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 347s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 347s Selecting previously unselected package libpcre2-posix3:arm64. 347s Preparing to unpack .../49-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 347s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 347s Selecting previously unselected package libpcre2-dev:arm64. 347s Preparing to unpack .../50-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 347s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 347s Selecting previously unselected package libpkgconf3:arm64. 347s Preparing to unpack .../51-libpkgconf3_1.8.1-2_arm64.deb ... 347s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 347s Selecting previously unselected package zlib1g-dev:arm64. 347s Preparing to unpack .../52-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 347s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 347s Selecting previously unselected package libpng-dev:arm64. 347s Preparing to unpack .../53-libpng-dev_1.6.43-1_arm64.deb ... 347s Unpacking libpng-dev:arm64 (1.6.43-1) ... 347s Selecting previously unselected package libreadline-dev:arm64. 347s Preparing to unpack .../54-libreadline-dev_8.2-3_arm64.deb ... 347s Unpacking libreadline-dev:arm64 (8.2-3) ... 347s Selecting previously unselected package pkgconf-bin. 347s Preparing to unpack .../55-pkgconf-bin_1.8.1-2_arm64.deb ... 347s Unpacking pkgconf-bin (1.8.1-2) ... 347s Selecting previously unselected package pkgconf:arm64. 347s Preparing to unpack .../56-pkgconf_1.8.1-2_arm64.deb ... 347s Unpacking pkgconf:arm64 (1.8.1-2) ... 347s Selecting previously unselected package pkg-config:arm64. 347s Preparing to unpack .../57-pkg-config_1.8.1-2_arm64.deb ... 347s Unpacking pkg-config:arm64 (1.8.1-2) ... 347s Selecting previously unselected package liblzma-dev:arm64. 347s Preparing to unpack .../58-liblzma-dev_5.4.5-0.3_arm64.deb ... 347s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 347s Selecting previously unselected package r-base-dev. 347s Preparing to unpack .../59-r-base-dev_4.3.2-1build1_all.deb ... 347s Unpacking r-base-dev (4.3.2-1build1) ... 347s Selecting previously unselected package pkg-r-autopkgtest. 347s Preparing to unpack .../60-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 347s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 347s Selecting previously unselected package autopkgtest-satdep. 347s Preparing to unpack .../61-2-autopkgtest-satdep.deb ... 347s Unpacking autopkgtest-satdep (0) ... 347s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 347s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 347s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 347s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 347s Setting up libpkgconf3:arm64 (1.8.1-2) ... 347s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 347s Setting up libmpc3:arm64 (1.3.1-1) ... 347s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 347s Setting up icu-devtools (74.2-1ubuntu1) ... 347s Setting up pkgconf-bin (1.8.1-2) ... 347s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 347s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 347s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 347s Setting up libnsl-dev:arm64 (1.3.0-3) ... 347s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 347s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 347s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 347s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 347s Setting up libisl23:arm64 (0.26-3) ... 347s Setting up libc-dev-bin (2.39-0ubuntu2) ... 347s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 347s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 347s Setting up libblas-dev:arm64 (3.12.0-3) ... 347s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 347s Setting up dctrl-tools (2.24-3build2) ... 347s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 347s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 347s Setting up pkgconf:arm64 (1.8.1-2) ... 347s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 347s Setting up liblapack-dev:arm64 (3.12.0-3) ... 347s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 347s Setting up pkg-config:arm64 (1.8.1-2) ... 347s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 347s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 347s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 347s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 347s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 347s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 347s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 347s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 347s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 347s Setting up cpp-13 (13.2.0-17ubuntu2) ... 347s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 347s Setting up libreadline-dev:arm64 (8.2-3) ... 347s Setting up gcc-13 (13.2.0-17ubuntu2) ... 347s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 347s Setting up cpp (4:13.2.0-7ubuntu1) ... 347s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 347s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 347s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 347s Setting up g++-13 (13.2.0-17ubuntu2) ... 347s Setting up libpng-dev:arm64 (1.6.43-1) ... 347s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 347s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 347s Setting up gcc (4:13.2.0-7ubuntu1) ... 347s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 347s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 347s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 347s Setting up gfortran (4:13.2.0-7ubuntu1) ... 347s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 347s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 347s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 347s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 347s Setting up g++ (4:13.2.0-7ubuntu1) ... 347s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 347s Setting up build-essential (12.10ubuntu1) ... 347s Setting up r-base-dev (4.3.2-1build1) ... 347s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 347s Setting up autopkgtest-satdep (0) ... 347s Processing triggers for man-db (2.12.0-3) ... 348s Processing triggers for install-info (7.1-3) ... 348s Processing triggers for libc-bin (2.39-0ubuntu2) ... 351s (Reading database ... 85865 files and directories currently installed.) 351s Removing autopkgtest-satdep (0) ... 352s autopkgtest [19:25:01]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 352s autopkgtest [19:25:01]: test pkg-r-autopkgtest: [----------------------- 352s Test: Try to load the R library msm 352s 352s R version 4.3.2 (2023-10-31) -- "Eye Holes" 352s Copyright (C) 2023 The R Foundation for Statistical Computing 352s Platform: aarch64-unknown-linux-gnu (64-bit) 352s 352s R is free software and comes with ABSOLUTELY NO WARRANTY. 352s You are welcome to redistribute it under certain conditions. 352s Type 'license()' or 'licence()' for distribution details. 352s 352s R is a collaborative project with many contributors. 352s Type 'contributors()' for more information and 352s 'citation()' on how to cite R or R packages in publications. 352s 352s Type 'demo()' for some demos, 'help()' for on-line help, or 352s 'help.start()' for an HTML browser interface to help. 352s Type 'q()' to quit R. 352s 352s > library('msm') 353s > 353s > 353s Other tests are currently unsupported! 353s They will be progressively added. 353s autopkgtest [19:25:02]: test pkg-r-autopkgtest: -----------------------] 354s autopkgtest [19:25:03]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 354s pkg-r-autopkgtest PASS 354s autopkgtest [19:25:03]: @@@@@@@@@@@@@@@@@@@@ summary 354s run-unit-test PASS 354s pkg-r-autopkgtest PASS 358s Creating nova instance adt-noble-arm64-r-cran-msm-20240316-191909-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...