0s autopkgtest [19:07:18]: starting date and time: 2024-03-16 19:07:18+0000
  0s autopkgtest [19:07:18]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data
  0s autopkgtest [19:07:18]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.h0ya856z/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-lwgeom --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-13.secgroup --name adt-noble-arm64-r-cran-lwgeom-20240316-190718-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
162s autopkgtest [19:10:00]: testbed dpkg architecture: arm64
162s autopkgtest [19:10:00]: testbed apt version: 2.7.12
162s autopkgtest [19:10:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup
163s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
163s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
163s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB]
163s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB]
163s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
163s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB]
163s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
163s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
163s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
163s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB]
164s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
164s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB]
164s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
165s Fetched 9084 kB in 2s (4867 kB/s)
166s Reading package lists...
168s Reading package lists...
168s Building dependency tree...
168s Reading state information...
169s Calculating upgrade...
169s The following packages will be REMOVED:
169s   libglib2.0-0 libssl3
169s The following NEW packages will be installed:
169s   libglib2.0-0t64 libssl3t64 xdg-user-dirs
169s The following packages have been kept back:
169s   curl
169s The following packages will be upgraded:
169s   gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common
169s   ubuntu-minimal ubuntu-standard
169s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded.
169s Need to get 4613 kB of archives.
169s After this operation, 211 kB of additional disk space will be used.
169s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB]
169s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB]
170s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB]
170s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB]
170s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB]
170s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B]
170s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
170s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB]
170s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB]
170s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB]
170s Fetched 4613 kB in 1s (6701 kB/s)
170s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74758 files and directories currently installed.)
170s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ...
170s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
171s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested:
171s  udisks2 depends on libglib2.0-0 (>= 2.77.0).
171s  shared-mime-info depends on libglib2.0-0 (>= 2.75.3).
171s  python3-gi depends on libglib2.0-0 (>= 2.77.0).
171s  python3-dbus depends on libglib2.0-0 (>= 2.16.0).
171s  netplan.io depends on libglib2.0-0 (>= 2.70.0).
171s  netplan-generator depends on libglib2.0-0 (>= 2.70.0).
171s  libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0).
171s  libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0).
171s  libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
171s  libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56).
171s  libqmi-proxy depends on libglib2.0-0 (>= 2.30.0).
171s  libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0).
171s  libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
171s  libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
171s  libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3).
171s  libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0).
171s  libmbim-proxy depends on libglib2.0-0 (>= 2.56).
171s  libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56).
171s  libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
171s  libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3).
171s  libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3).
171s  libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
171s  libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0).
171s  libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0).
171s  libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3).
171s  libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2).
171s  fwupd depends on libglib2.0-0 (>= 2.79.0).
171s  bolt depends on libglib2.0-0 (>= 2.56.0).
171s 
171s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
171s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ...
171s Selecting previously unselected package libglib2.0-0t64:arm64.
171s (Reading database ... 
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(Reading database ... 74733 files and directories currently installed.)
171s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ...
171s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled...
171s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm'
171s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
171s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ...
171s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ...
171s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested:
171s  wget depends on libssl3 (>= 3.0.0).
171s  u-boot-tools depends on libssl3 (>= 3.0.0).
171s  tnftp depends on libssl3 (>= 3.0.0).
171s  tcpdump depends on libssl3 (>= 3.0.0).
171s  systemd-resolved depends on libssl3 (>= 3.0.0).
171s  systemd depends on libssl3 (>= 3.0.0).
171s  sudo depends on libssl3 (>= 3.0.0).
171s  sbsigntool depends on libssl3 (>= 3.0.0).
171s  rsync depends on libssl3 (>= 3.0.0).
171s  python3-cryptography depends on libssl3 (>= 3.0.0).
171s  openssh-server depends on libssl3 (>= 3.0.10).
171s  openssh-client depends on libssl3 (>= 3.0.10).
171s  mtd-utils depends on libssl3 (>= 3.0.0).
171s  mokutil depends on libssl3 (>= 3.0.0).
171s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
171s  libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0).
171s  libssh-4:arm64 depends on libssl3 (>= 3.0.0).
171s  libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0).
171s  libsasl2-2:arm64 depends on libssl3 (>= 3.0.0).
171s  libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0).
171s  libnvme1 depends on libssl3 (>= 3.0.0).
171s  libkrb5-3:arm64 depends on libssl3 (>= 3.0.0).
171s  libkmod2:arm64 depends on libssl3 (>= 3.0.0).
171s  libfido2-1:arm64 depends on libssl3 (>= 3.0.0).
171s  libcurl4:arm64 depends on libssl3 (>= 3.0.0).
171s  libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0).
171s  kmod depends on libssl3 (>= 3.0.0).
171s  dhcpcd-base depends on libssl3 (>= 3.0.0).
171s  bind9-libs:arm64 depends on libssl3 (>= 3.0.0).
171s 
171s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
171s Removing libssl3:arm64 (3.0.10-1ubuntu4) ...
171s Selecting previously unselected package libssl3t64:arm64.
171s (Reading database ... 
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(Reading database ... 74747 files and directories currently installed.)
171s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ...
171s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ...
171s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ...
171s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
171s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ...
171s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ...
171s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ...
171s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
171s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ...
171s Unpacking ubuntu-minimal (1.536) over (1.535) ...
171s Selecting previously unselected package xdg-user-dirs.
171s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ...
171s Unpacking xdg-user-dirs (0.18-1) ...
171s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ...
171s Unpacking ubuntu-standard (1.536) over (1.535) ...
171s Setting up ubuntu-minimal (1.536) ...
171s Setting up xdg-user-dirs (0.18-1) ...
171s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ...
171s Setting up libtirpc-common (1.3.4+ds-1.1) ...
171s Setting up ubuntu-standard (1.536) ...
171s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
171s No schema files found: doing nothing.
171s Setting up libglib2.0-data (2.79.3-3ubuntu5) ...
171s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ...
171s Setting up openssl (3.0.13-0ubuntu1) ...
171s Setting up readline-common (8.2-3.1) ...
171s Processing triggers for man-db (2.12.0-3) ...
172s Processing triggers for install-info (7.1-3) ...
172s Processing triggers for libc-bin (2.39-0ubuntu2) ...
173s Reading package lists...
173s Building dependency tree...
173s Reading state information...
173s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
174s Get:1 http://ftpmaster.internal/ubuntu noble InRelease [255 kB]
174s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
174s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
174s Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
174s Get:5 http://ftpmaster.internal/ubuntu noble/universe Sources [19.8 MB]
177s Get:6 http://ftpmaster.internal/ubuntu noble/universe arm64 Packages [15.5 MB]
177s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB]
178s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB]
178s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4013 kB]
181s Fetched 43.9 MB in 7s (6665 kB/s)
181s Reading package lists...
182s Reading package lists...
182s Building dependency tree...
182s Reading state information...
182s Calculating upgrade...
183s The following packages have been kept back:
183s   curl
183s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
183s Reading package lists...
183s Building dependency tree...
183s Reading state information...
183s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
186s autopkgtest [19:10:24]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
186s autopkgtest [19:10:24]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-lwgeom
188s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-lwgeom 0.2-13-3 (dsc) [2513 B]
188s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-lwgeom 0.2-13-3 (tar) [475 kB]
188s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-lwgeom 0.2-13-3 (diff) [4160 B]
188s gpgv: Signature made Tue Jan  9 16:00:49 2024 UTC
188s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
188s gpgv:                issuer "tille@debian.org"
188s gpgv: Can't check signature: No public key
188s dpkg-source: warning: cannot verify inline signature for ./r-cran-lwgeom_0.2-13-3.dsc: no acceptable signature found
188s autopkgtest [19:10:26]: testing package r-cran-lwgeom version 0.2-13-3
189s autopkgtest [19:10:27]: build not needed
191s autopkgtest [19:10:29]: test run-unit-test: preparing testbed
193s Reading package lists...
194s Building dependency tree...
194s Reading state information...
194s Starting pkgProblemResolver with broken count: 0
194s Starting 2 pkgProblemResolver with broken count: 0
194s Done
195s The following additional packages will be installed:
195s   curl fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
195s   fonts-glyphicons-halflings gdal-data gdal-plugins libaec0 libarmadillo12
195s   libarpack2 libblas3 libblosc1 libcairo2 libcfitsio10 libcurl4t64 libdatrie1
195s   libdav1d7 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0
195s   libgdal34 libgeos-c1v5 libgeos3.12.1 libgeotiff5 libgfortran5 libgif7
195s   libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1
195s   libhdf5-hl-100 libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libice6
195s   libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libkmlbase1 libkmldom1
195s   libkmlengine1 liblapack3 liblcms2-2 liblerc4 libltdl7 libminizip1
195s   libmysqlclient21 libnetcdf19 libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7
195s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
195s   libpaper1 libpixman-1-0 libpng16-16t64 libpoppler134 libpq5 libproj25
195s   libpsl5t64 libqhull-r8.0 libreadline8t64 librttopo1 libsharpyuv0 libsm6
195s   libsnappy1v5 libspatialite8 libsuperlu6 libsz2 libtcl8.6 libthai-data
195s   libthai0 libtiff6 libtirpc3t64 libtk8.6 libudunits2-0 libudunits2-data
195s   liburiparser1 libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2 libxft2
195s   libxrender1 libxss1 libxt6t64 littler mysql-common node-html5shiv proj-data
195s   r-base-core r-cran-askpass r-cran-brio r-cran-callr r-cran-class
195s   r-cran-classint r-cran-cli r-cran-covr r-cran-crayon r-cran-curl r-cran-dbi
195s   r-cran-desc r-cran-diffobj r-cran-digest r-cran-e1071 r-cran-evaluate
195s   r-cran-fansi r-cran-fs r-cran-geosphere r-cran-glue r-cran-httr
195s   r-cran-jsonlite r-cran-kernsmooth r-cran-lattice r-cran-lazyeval
195s   r-cran-lifecycle r-cran-littler r-cran-lwgeom r-cran-magrittr r-cran-mass
195s   r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
195s   r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-proxy
195s   r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex r-cran-rlang
195s   r-cran-rprojroot r-cran-s2 r-cran-sf r-cran-sp r-cran-sys r-cran-testthat
195s   r-cran-tibble r-cran-units r-cran-utf8 r-cran-vctrs r-cran-waldo
195s   r-cran-withr r-cran-wk r-cran-yaml unixodbc-common unzip x11-common
195s   xdg-utils zip
195s Suggested packages:
195s   geotiff-bin gdal-bin libgeotiff-epsg libhdf4-doc libhdf4-alt-dev hdf4-tools
195s   libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc
195s   libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-rav1e
195s   libheif-plugin-svtenc liblcms2-utils odbc-postgresql tdsodbc ogdi-bin
195s   proj-bin tcl8.6 tk8.6 nodejs elpa-ess r-doc-info | r-doc-pdf r-mathlib
195s   r-base-html r-cran-spelling r-cran-rstudioapi r-cran-rmysql r-cran-knitr
195s   r-cran-rmarkdown r-cran-getopt r-cran-bit64 r-cran-dplyr r-cran-formattable
195s   r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins r-cran-scales
195s   r-cran-stringi r-cran-survival r-cran-vdiffr r-cran-inline r-cran-hmisc
195s   r-cran-roxygen2 r-cran-rvest r-cran-stringr r-cran-bench r-cran-blob
195s   r-cran-here r-cran-hms r-cran-htmltools r-cran-purrr r-cran-tidyr
195s Recommended packages:
195s   proj-bin libheif-plugin-aomenc libheif-plugin-x265 poppler-data
195s   r-recommended r-base-dev r-doc-html r-cran-cliapp r-cran-mockery
195s   r-cran-spdata r-cran-knitr r-cran-rmarkdown r-cran-tinytest r-cran-htmltools
195s   r-cran-htmlwidgets r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2
195s   r-cran-memoise r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils
195s   r-cran-gh r-cran-ggplot2 r-cran-unitizer r-cran-raster r-cran-dplyr
195s   r-cran-rsqlite r-cran-jpeg r-cran-png r-cran-readr r-cran-r.rsp r-cran-lintr
195s   r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-cpp11 r-cran-bitops
195s   r-cran-mathjaxr r-cran-mockr r-cran-remotes r-cran-codetools r-cran-webfakes
195s   r-cran-cba r-cran-pingr r-cran-usethis r-cran-bit64 r-cran-blob r-cran-maps
195s   r-cran-matrix r-cran-pbapply r-cran-rpostgresql r-cran-spatstat
195s   r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.linnet
195s   r-cran-spatstat.utils r-cran-stars r-cran-terra r-cran-tidyr
195s   r-cran-tidyselect r-cran-rcolorbrewer r-cran-gstat r-cran-deldir
195s   r-cran-shiny r-cran-data.table r-cran-formattable r-cran-vdiffr
195s   r-cran-generics r-cran-pkgdown r-cran-zeallot r-cran-runit
195s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
195s   x11-xserver-utils
195s The following packages will be REMOVED:
195s   libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3
195s The following NEW packages will be installed:
195s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
195s   fonts-dejavu-mono fonts-glyphicons-halflings gdal-data gdal-plugins libaec0
195s   libarmadillo12 libarpack2 libblas3 libblosc1 libcairo2 libcfitsio10
195s   libcurl4t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1
195s   libfreexl1 libfyba0 libgdal34 libgeos-c1v5 libgeos3.12.1 libgeotiff5
195s   libgfortran5 libgif7 libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
195s   libhdf5-103-1 libhdf5-hl-100 libheif-plugin-dav1d libheif-plugin-libde265
195s   libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap
195s   libkmlbase1 libkmldom1 libkmlengine1 liblapack3 liblcms2-2 liblerc4 libltdl7
195s   libminizip1 libmysqlclient21 libnetcdf19 libodbc2 libodbcinst2 libogdi4.1
195s   libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
195s   libpaper-utils libpaper1 libpixman-1-0 libpng16-16t64 libpoppler134 libpq5
195s   libproj25 libpsl5t64 libqhull-r8.0 libreadline8t64 librttopo1 libsharpyuv0
195s   libsm6 libsnappy1v5 libspatialite8 libsuperlu6 libsz2 libtcl8.6 libthai-data
195s   libthai0 libtiff6 libtirpc3t64 libtk8.6 libudunits2-0 libudunits2-data
195s   liburiparser1 libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2 libxft2
195s   libxrender1 libxss1 libxt6t64 littler mysql-common node-html5shiv proj-data
195s   r-base-core r-cran-askpass r-cran-brio r-cran-callr r-cran-class
195s   r-cran-classint r-cran-cli r-cran-covr r-cran-crayon r-cran-curl r-cran-dbi
195s   r-cran-desc r-cran-diffobj r-cran-digest r-cran-e1071 r-cran-evaluate
195s   r-cran-fansi r-cran-fs r-cran-geosphere r-cran-glue r-cran-httr
195s   r-cran-jsonlite r-cran-kernsmooth r-cran-lattice r-cran-lazyeval
195s   r-cran-lifecycle r-cran-littler r-cran-lwgeom r-cran-magrittr r-cran-mass
195s   r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
195s   r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-proxy
195s   r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex r-cran-rlang
195s   r-cran-rprojroot r-cran-s2 r-cran-sf r-cran-sp r-cran-sys r-cran-testthat
195s   r-cran-tibble r-cran-units r-cran-utf8 r-cran-vctrs r-cran-waldo
195s   r-cran-withr r-cran-wk r-cran-yaml unixodbc-common unzip x11-common
195s   xdg-utils zip
195s The following packages will be upgraded:
195s   curl
195s 1 upgraded, 163 newly installed, 5 to remove and 0 not upgraded.
195s Need to get 98.1 MB/98.1 MB of archives.
195s After this operation, 237 MB of additional disk space will be used.
195s Get:1 /tmp/autopkgtest.6ukvGa/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [736 B]
195s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB]
195s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB]
195s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB]
196s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB]
196s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
196s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB]
196s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
196s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
196s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
196s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
196s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB]
196s Get:13 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
196s Get:14 http://ftpmaster.internal/ubuntu noble/universe arm64 gdal-data all 3.8.4+dfsg-1 [261 kB]
196s Get:15 http://ftpmaster.internal/ubuntu noble/universe arm64 gdal-plugins arm64 3.8.4+dfsg-1 [24.5 kB]
196s Get:16 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB]
196s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB]
196s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
196s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB]
196s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 libarpack2 arm64 3.9.1-1 [90.2 kB]
196s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libsuperlu6 arm64 6.0.1+dfsg1-1 [166 kB]
196s Get:22 http://ftpmaster.internal/ubuntu noble/universe arm64 libarmadillo12 arm64 1:12.6.7+dfsg-1 [134 kB]
196s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB]
196s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB]
196s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
196s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
196s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
196s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
196s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
196s Get:30 http://ftpmaster.internal/ubuntu noble/universe arm64 libcfitsio10 arm64 4.3.1-1 [519 kB]
196s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB]
196s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 libdav1d7 arm64 1.4.0-1 [297 kB]
196s Get:33 http://ftpmaster.internal/ubuntu noble/universe arm64 libde265-0 arm64 1.0.15-1 [167 kB]
196s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
196s Get:35 http://ftpmaster.internal/ubuntu noble/universe arm64 libfyba0 arm64 4.1.1-8 [119 kB]
196s Get:36 http://ftpmaster.internal/ubuntu noble/universe arm64 libminizip1 arm64 1:1.3.dfsg-3ubuntu1 [22.3 kB]
196s Get:37 http://ftpmaster.internal/ubuntu noble/universe arm64 libfreexl1 arm64 2.0.0-1 [41.1 kB]
196s Get:38 http://ftpmaster.internal/ubuntu noble/universe arm64 libgeos3.12.1 arm64 3.12.1-1 [825 kB]
196s Get:39 http://ftpmaster.internal/ubuntu noble/universe arm64 libgeos-c1v5 arm64 3.12.1-1 [88.8 kB]
196s Get:40 http://ftpmaster.internal/ubuntu noble/universe arm64 proj-data all 9.3.1-1 [7867 kB]
196s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
196s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
196s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
196s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
196s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
196s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
196s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
196s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 libproj25 arm64 9.3.1-1 [1261 kB]
196s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 libgeotiff5 arm64 1.7.1-5 [59.8 kB]
196s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libgif7 arm64 5.2.1-2.5 [34.2 kB]
196s Get:51 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf4-0-alt arm64 4.2.16-3 [267 kB]
196s Get:52 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B]
196s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB]
196s Get:54 http://ftpmaster.internal/ubuntu noble/universe arm64 libheif-plugin-dav1d arm64 1.17.6-1ubuntu1 [10.9 kB]
196s Get:55 http://ftpmaster.internal/ubuntu noble/universe arm64 libheif-plugin-libde265 arm64 1.17.6-1ubuntu1 [9062 B]
196s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 libheif1 arm64 1.17.6-1ubuntu1 [311 kB]
196s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 liburiparser1 arm64 0.9.7+dfsg-2 [34.0 kB]
196s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 libkmlbase1 arm64 1.3.0-10 [45.7 kB]
196s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 libkmldom1 arm64 1.3.0-10 [140 kB]
197s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 libkmlengine1 arm64 1.3.0-10 [64.9 kB]
197s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 mysql-common all 5.8+1.1.0 [6626 B]
197s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libmysqlclient21 arm64 8.0.36-1 [1271 kB]
197s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB]
197s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 libnetcdf19 arm64 1:4.9.2-3ubuntu1 [470 kB]
197s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libltdl7 arm64 2.4.7-7 [40.3 kB]
197s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libodbc2 arm64 2.3.12-1 [144 kB]
197s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 unixodbc-common all 2.3.12-1 [8524 B]
197s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libodbcinst2 arm64 2.3.12-1 [29.3 kB]
197s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 libogdi4.1 arm64 4.1.1+ds-1 [204 kB]
197s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB]
197s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB]
197s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libpoppler134 arm64 24.02.0-1ubuntu2 [1072 kB]
197s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libpq5 arm64 16.2-1 [136 kB]
197s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libqhull-r8.0 arm64 2020.2-6 [188 kB]
197s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 librttopo1 arm64 1.1.0-3 [184 kB]
197s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libspatialite8 arm64 5.1.0-1 [1938 kB]
197s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 libxerces-c3.2 arm64 3.2.4+debian-1.1 [1065 kB]
197s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libgdal34 arm64 3.8.4+dfsg-1 [7887 kB]
197s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
197s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
197s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
197s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
197s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB]
197s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
197s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB]
197s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB]
197s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB]
197s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB]
197s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB]
197s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB]
197s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B]
197s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB]
197s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB]
197s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
197s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B]
197s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB]
197s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libudunits2-data all 2.2.28-7 [19.3 kB]
197s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libudunits2-0 arm64 2.2.28-7 [52.5 kB]
197s Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB]
197s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB]
197s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB]
197s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
197s Get:103 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB]
199s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB]
199s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B]
199s Get:106 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
199s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB]
199s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB]
199s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB]
199s Get:110 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB]
199s Get:111 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB]
199s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB]
199s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB]
199s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB]
199s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-class arm64 7.3-22-2 [88.2 kB]
199s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB]
199s Get:117 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-e1071 arm64 1.7-14-1 [556 kB]
199s Get:118 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-kernsmooth arm64 2.23-22-1 [91.1 kB]
199s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-classint arm64 0.4-10+dfsg-1 [106 kB]
199s Get:120 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB]
199s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB]
199s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB]
199s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB]
199s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rex all 1.2.1-1 [129 kB]
199s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB]
199s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB]
199s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB]
199s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
199s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB]
199s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB]
199s Get:131 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB]
199s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB]
199s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB]
199s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
199s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
199s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB]
199s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB]
199s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB]
199s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB]
199s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB]
199s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB]
199s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sp arm64 1:2.1-2+dfsg-1 [1448 kB]
199s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-geosphere arm64 1.5-18-1 [991 kB]
199s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB]
199s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB]
200s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
200s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB]
200s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
200s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-wk arm64 0.9.1-1 [1785 kB]
200s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-s2 arm64 1.1.6-1 [1947 kB]
200s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sf arm64 1.0-15+dfsg-1 [2989 kB]
200s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lwgeom arm64 0.2-13-3 [382 kB]
200s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB]
200s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB]
200s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB]
200s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB]
200s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
200s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB]
200s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB]
200s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
200s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB]
200s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB]
200s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB]
200s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB]
201s Preconfiguring packages ...
201s Fetched 98.1 MB in 5s (19.5 MB/s)
201s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested:
201s  wget depends on libpsl5 (>= 0.16.0).
201s  libcurl4:arm64 depends on libpsl5 (>= 0.16.0).
201s  libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0).
201s 
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201s Removing libpsl5:arm64 (0.21.2-1build1) ...
201s Selecting previously unselected package libpsl5t64:arm64.
201s (Reading database ... 
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201s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ...
201s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ...
201s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ...
201s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ...
201s (Reading database ... 
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201s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ...
201s Selecting previously unselected package libcurl4t64:arm64.
201s (Reading database ... 
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201s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ...
201s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ...
201s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested:
201s  libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2).
201s  libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1).
201s 
201s (Reading database ... 
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201s Removing libpng16-16:arm64 (1.6.43-1) ...
201s Selecting previously unselected package libpng16-16t64:arm64.
202s (Reading database ... 
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202s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ...
202s Unpacking libpng16-16t64:arm64 (1.6.43-3) ...
202s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
202s  parted depends on libreadline8 (>= 6.0).
202s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
202s  gpgsm depends on libreadline8 (>= 6.0).
202s  gpgconf depends on libreadline8 (>= 6.0).
202s  gpg depends on libreadline8 (>= 6.0).
202s  gawk depends on libreadline8 (>= 6.0).
202s  fdisk depends on libreadline8 (>= 6.0).
202s 
202s (Reading database ... 
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202s Removing libreadline8:arm64 (8.2-3) ...
202s Selecting previously unselected package libreadline8t64:arm64.
202s (Reading database ... 
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202s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ...
202s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
202s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
202s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
202s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
202s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
202s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested:
202s  lsof depends on libtirpc3 (>= 1.0.2).
202s  libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2).
202s  libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2).
202s  libnsl2:arm64 depends on libtirpc3 (>= 1.0.2).
202s  iproute2 depends on libtirpc3 (>= 1.0.2).
202s 
202s (Reading database ... 
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202s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ...
202s Selecting previously unselected package libtirpc3t64:arm64.
202s (Reading database ... 
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202s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ...
202s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
202s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
202s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ...
202s Selecting previously unselected package fonts-dejavu-mono.
202s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ...
202s Unpacking fonts-dejavu-mono (2.37-8) ...
202s Selecting previously unselected package fonts-dejavu-core.
202s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ...
202s Unpacking fonts-dejavu-core (2.37-8) ...
202s Selecting previously unselected package fontconfig-config.
202s Preparing to unpack .../003-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
202s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
202s Selecting previously unselected package libfontconfig1:arm64.
202s Preparing to unpack .../004-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
202s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
202s Selecting previously unselected package fontconfig.
202s Preparing to unpack .../005-fontconfig_2.15.0-1ubuntu1_arm64.deb ...
202s Unpacking fontconfig (2.15.0-1ubuntu1) ...
202s Selecting previously unselected package fonts-glyphicons-halflings.
202s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
202s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
202s Selecting previously unselected package gdal-data.
202s Preparing to unpack .../007-gdal-data_3.8.4+dfsg-1_all.deb ...
202s Unpacking gdal-data (3.8.4+dfsg-1) ...
202s Selecting previously unselected package gdal-plugins:arm64.
202s Preparing to unpack .../008-gdal-plugins_3.8.4+dfsg-1_arm64.deb ...
202s Unpacking gdal-plugins:arm64 (3.8.4+dfsg-1) ...
202s Selecting previously unselected package libaec0:arm64.
202s Preparing to unpack .../009-libaec0_1.1.2-1_arm64.deb ...
202s Unpacking libaec0:arm64 (1.1.2-1) ...
203s Selecting previously unselected package libblas3:arm64.
203s Preparing to unpack .../010-libblas3_3.12.0-3_arm64.deb ...
203s Unpacking libblas3:arm64 (3.12.0-3) ...
203s Selecting previously unselected package libgfortran5:arm64.
203s Preparing to unpack .../011-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
203s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
203s Selecting previously unselected package liblapack3:arm64.
203s Preparing to unpack .../012-liblapack3_3.12.0-3_arm64.deb ...
203s Unpacking liblapack3:arm64 (3.12.0-3) ...
203s Selecting previously unselected package libarpack2:arm64.
203s Preparing to unpack .../013-libarpack2_3.9.1-1_arm64.deb ...
203s Unpacking libarpack2:arm64 (3.9.1-1) ...
203s Selecting previously unselected package libsuperlu6:arm64.
203s Preparing to unpack .../014-libsuperlu6_6.0.1+dfsg1-1_arm64.deb ...
203s Unpacking libsuperlu6:arm64 (6.0.1+dfsg1-1) ...
203s Selecting previously unselected package libarmadillo12.
203s Preparing to unpack .../015-libarmadillo12_1%3a12.6.7+dfsg-1_arm64.deb ...
203s Unpacking libarmadillo12 (1:12.6.7+dfsg-1) ...
203s Selecting previously unselected package libsnappy1v5:arm64.
203s Preparing to unpack .../016-libsnappy1v5_1.1.10-1_arm64.deb ...
203s Unpacking libsnappy1v5:arm64 (1.1.10-1) ...
203s Selecting previously unselected package libblosc1:arm64.
203s Preparing to unpack .../017-libblosc1_1.21.5+ds-1_arm64.deb ...
203s Unpacking libblosc1:arm64 (1.21.5+ds-1) ...
203s Selecting previously unselected package libpixman-1-0:arm64.
203s Preparing to unpack .../018-libpixman-1-0_0.42.2-1_arm64.deb ...
203s Unpacking libpixman-1-0:arm64 (0.42.2-1) ...
203s Selecting previously unselected package libxcb-render0:arm64.
203s Preparing to unpack .../019-libxcb-render0_1.15-1_arm64.deb ...
203s Unpacking libxcb-render0:arm64 (1.15-1) ...
203s Selecting previously unselected package libxcb-shm0:arm64.
203s Preparing to unpack .../020-libxcb-shm0_1.15-1_arm64.deb ...
203s Unpacking libxcb-shm0:arm64 (1.15-1) ...
203s Selecting previously unselected package libxrender1:arm64.
203s Preparing to unpack .../021-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
203s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
203s Selecting previously unselected package libcairo2:arm64.
203s Preparing to unpack .../022-libcairo2_1.18.0-1_arm64.deb ...
203s Unpacking libcairo2:arm64 (1.18.0-1) ...
203s Selecting previously unselected package libcfitsio10:arm64.
203s Preparing to unpack .../023-libcfitsio10_4.3.1-1_arm64.deb ...
203s Unpacking libcfitsio10:arm64 (4.3.1-1) ...
203s Selecting previously unselected package libdatrie1:arm64.
203s Preparing to unpack .../024-libdatrie1_0.2.13-3_arm64.deb ...
203s Unpacking libdatrie1:arm64 (0.2.13-3) ...
203s Selecting previously unselected package libdav1d7:arm64.
203s Preparing to unpack .../025-libdav1d7_1.4.0-1_arm64.deb ...
203s Unpacking libdav1d7:arm64 (1.4.0-1) ...
203s Selecting previously unselected package libde265-0:arm64.
203s Preparing to unpack .../026-libde265-0_1.0.15-1_arm64.deb ...
203s Unpacking libde265-0:arm64 (1.0.15-1) ...
203s Selecting previously unselected package libdeflate0:arm64.
203s Preparing to unpack .../027-libdeflate0_1.19-1_arm64.deb ...
203s Unpacking libdeflate0:arm64 (1.19-1) ...
203s Selecting previously unselected package libfyba0:arm64.
203s Preparing to unpack .../028-libfyba0_4.1.1-8_arm64.deb ...
203s Unpacking libfyba0:arm64 (4.1.1-8) ...
203s Selecting previously unselected package libminizip1:arm64.
203s Preparing to unpack .../029-libminizip1_1%3a1.3.dfsg-3ubuntu1_arm64.deb ...
203s Unpacking libminizip1:arm64 (1:1.3.dfsg-3ubuntu1) ...
203s Selecting previously unselected package libfreexl1:arm64.
203s Preparing to unpack .../030-libfreexl1_2.0.0-1_arm64.deb ...
203s Unpacking libfreexl1:arm64 (2.0.0-1) ...
203s Selecting previously unselected package libgeos3.12.1:arm64.
203s Preparing to unpack .../031-libgeos3.12.1_3.12.1-1_arm64.deb ...
203s Unpacking libgeos3.12.1:arm64 (3.12.1-1) ...
203s Selecting previously unselected package libgeos-c1v5:arm64.
203s Preparing to unpack .../032-libgeos-c1v5_3.12.1-1_arm64.deb ...
203s Unpacking libgeos-c1v5:arm64 (3.12.1-1) ...
203s Selecting previously unselected package proj-data.
203s Preparing to unpack .../033-proj-data_9.3.1-1_all.deb ...
203s Unpacking proj-data (9.3.1-1) ...
204s Selecting previously unselected package libjbig0:arm64.
204s Preparing to unpack .../034-libjbig0_2.1-6.1ubuntu1_arm64.deb ...
204s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
204s Selecting previously unselected package libjpeg-turbo8:arm64.
204s Preparing to unpack .../035-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
204s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
204s Selecting previously unselected package libjpeg8:arm64.
204s Preparing to unpack .../036-libjpeg8_8c-2ubuntu11_arm64.deb ...
204s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
204s Selecting previously unselected package liblerc4:arm64.
204s Preparing to unpack .../037-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
204s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
204s Selecting previously unselected package libsharpyuv0:arm64.
204s Preparing to unpack .../038-libsharpyuv0_1.3.2-0.4_arm64.deb ...
204s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ...
204s Selecting previously unselected package libwebp7:arm64.
204s Preparing to unpack .../039-libwebp7_1.3.2-0.4_arm64.deb ...
204s Unpacking libwebp7:arm64 (1.3.2-0.4) ...
204s Selecting previously unselected package libtiff6:arm64.
204s Preparing to unpack .../040-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
204s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
204s Selecting previously unselected package libproj25:arm64.
204s Preparing to unpack .../041-libproj25_9.3.1-1_arm64.deb ...
204s Unpacking libproj25:arm64 (9.3.1-1) ...
204s Selecting previously unselected package libgeotiff5:arm64.
204s Preparing to unpack .../042-libgeotiff5_1.7.1-5_arm64.deb ...
204s Unpacking libgeotiff5:arm64 (1.7.1-5) ...
204s Selecting previously unselected package libgif7:arm64.
204s Preparing to unpack .../043-libgif7_5.2.1-2.5_arm64.deb ...
204s Unpacking libgif7:arm64 (5.2.1-2.5) ...
204s Selecting previously unselected package libhdf4-0-alt.
204s Preparing to unpack .../044-libhdf4-0-alt_4.2.16-3_arm64.deb ...
204s Unpacking libhdf4-0-alt (4.2.16-3) ...
204s Selecting previously unselected package libsz2:arm64.
204s Preparing to unpack .../045-libsz2_1.1.2-1_arm64.deb ...
204s Unpacking libsz2:arm64 (1.1.2-1) ...
204s Selecting previously unselected package libhdf5-103-1:arm64.
204s Preparing to unpack .../046-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ...
204s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
204s Selecting previously unselected package libheif-plugin-dav1d:arm64.
204s Preparing to unpack .../047-libheif-plugin-dav1d_1.17.6-1ubuntu1_arm64.deb ...
204s Unpacking libheif-plugin-dav1d:arm64 (1.17.6-1ubuntu1) ...
204s Selecting previously unselected package libheif-plugin-libde265:arm64.
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206s Selecting previously unselected package r-cran-littler.
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207s Selecting previously unselected package r-cran-lazyeval.
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207s Selecting previously unselected package r-cran-rex.
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207s Selecting previously unselected package r-cran-curl.
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207s Selecting previously unselected package r-cran-mime.
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207s Selecting previously unselected package r-cran-openssl.
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207s Selecting previously unselected package r-cran-httr.
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208s Selecting previously unselected package r-cran-crayon.
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208s Selecting previously unselected package r-cran-covr.
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208s Selecting previously unselected package r-cran-dbi.
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208s Selecting previously unselected package r-cran-diffobj.
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208s Selecting previously unselected package r-cran-evaluate.
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208s Selecting previously unselected package r-cran-fansi.
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208s Selecting previously unselected package r-cran-fs.
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208s Selecting previously unselected package r-cran-pkgkitten.
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208s Selecting previously unselected package r-cran-geosphere.
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208s Selecting previously unselected package r-cran-glue.
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208s Selecting previously unselected package r-cran-rlang.
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208s Selecting previously unselected package r-cran-lifecycle.
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209s Selecting previously unselected package r-cran-units.
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209s Selecting previously unselected package r-cran-magrittr.
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209s Selecting previously unselected package r-cran-wk.
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209s Selecting previously unselected package r-cran-s2.
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209s Selecting previously unselected package r-cran-sf.
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209s Selecting previously unselected package r-cran-lwgeom.
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209s Selecting previously unselected package r-cran-utf8.
209s Preparing to unpack .../146-r-cran-utf8_1.2.4-1_arm64.deb ...
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209s Selecting previously unselected package r-cran-vctrs.
209s Preparing to unpack .../147-r-cran-vctrs_0.6.5-1_arm64.deb ...
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209s Selecting previously unselected package r-cran-pillar.
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209s Unpacking r-cran-pillar (1.9.0+dfsg-1) ...
209s Selecting previously unselected package r-cran-pkgbuild.
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209s Selecting previously unselected package r-cran-pkgconfig.
209s Preparing to unpack .../150-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
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209s Selecting previously unselected package r-cran-rprojroot.
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209s Unpacking r-cran-rprojroot (2.0.4-1) ...
209s Selecting previously unselected package r-cran-pkgload.
209s Preparing to unpack .../152-r-cran-pkgload_1.3.4-1_all.deb ...
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209s Selecting previously unselected package r-cran-praise.
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209s Unpacking r-cran-praise (1.0.0-4build1) ...
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224s (Reading database ... 83641 files and directories currently installed.)
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224s autopkgtest [19:11:02]: test run-unit-test: [-----------------------
224s BEGIN TEST azimuth.R
225s 
225s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
225s Copyright (C) 2024 The R Foundation for Statistical Computing
225s Platform: aarch64-unknown-linux-gnu (64-bit)
225s 
225s R is free software and comes with ABSOLUTELY NO WARRANTY.
225s You are welcome to redistribute it under certain conditions.
225s Type 'license()' or 'licence()' for distribution details.
225s 
225s R is a collaborative project with many contributors.
225s Type 'contributors()' for more information and
225s 'citation()' on how to cite R or R packages in publications.
225s 
225s Type 'demo()' for some demos, 'help()' for on-line help, or
225s 'help.start()' for an HTML browser interface to help.
225s Type 'q()' to quit R.
225s 
225s > suppressPackageStartupMessages(library(sf))
226s > suppressPackageStartupMessages(library(lwgeom))
226s > p = st_sfc(st_point(c(7,52)), st_point(c(8,53)), crs = 4326)
226s > st_geod_azimuth(p)
226s 0.5410385 [rad]
226s > 
226s BEGIN TEST dist.R
226s 
226s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
226s Copyright (C) 2024 The R Foundation for Statistical Computing
226s Platform: aarch64-unknown-linux-gnu (64-bit)
226s 
226s R is free software and comes with ABSOLUTELY NO WARRANTY.
226s You are welcome to redistribute it under certain conditions.
226s Type 'license()' or 'licence()' for distribution details.
226s 
226s R is a collaborative project with many contributors.
226s Type 'contributors()' for more information and
226s 'citation()' on how to cite R or R packages in publications.
226s 
226s Type 'demo()' for some demos, 'help()' for on-line help, or
226s 'help.start()' for an HTML browser interface to help.
226s Type 'q()' to quit R.
226s 
226s > suppressPackageStartupMessages(library(sf))
226s > library(sp)
226s > suppressPackageStartupMessages(library(units))
226s > library(geosphere)
226s > 
226s > x = st_sfc(
226s + st_point(c(0,0)),
226s + st_point(c(1,0)),
226s + st_point(c(2,0)),
226s + st_point(c(3,0)),
226s + crs = 4326
226s + )
226s > 
226s > y = st_sfc(
226s + st_point(c(0,10)),
226s + st_point(c(1,0)),
226s + st_point(c(2,0)),
226s + st_point(c(3,0)),
226s + st_point(c(4,0)),
226s + crs = 4326
226s + )
226s > 
226s > st_crs(y) = 4326
226s > st_crs(x) = 4326
226s > sf_use_s2(FALSE)
226s > (d.sf = st_distance(x, y))
226s Spherical geometry (s2) switched off
226s Units: [m]
226s         [,1]     [,2]     [,3]     [,4]     [,5]
226s [1,] 1105855 111319.5 222639.0 333958.5 445278.0
226s [2,] 1111387      0.0 111319.5 222639.0 333958.5
226s [3,] 1127822 111319.5      0.0 111319.5 222639.0
226s [4,] 1154693 222639.0 111319.5      0.0 111319.5
226s > 
227s BEGIN TEST geod.R
227s 
227s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
227s Copyright (C) 2024 The R Foundation for Statistical Computing
227s Platform: aarch64-unknown-linux-gnu (64-bit)
227s 
227s R is free software and comes with ABSOLUTELY NO WARRANTY.
227s You are welcome to redistribute it under certain conditions.
227s Type 'license()' or 'licence()' for distribution details.
227s 
227s R is a collaborative project with many contributors.
227s Type 'contributors()' for more information and
227s 'citation()' on how to cite R or R packages in publications.
227s 
227s Type 'demo()' for some demos, 'help()' for on-line help, or
227s 'help.start()' for an HTML browser interface to help.
227s Type 'q()' to quit R.
227s 
227s > ### Name: lw_geodetic
227s > ### Title: geodetic length, area, and predicates
227s > ### Aliases: lw_geodetic st_geod_area lw_geodetic st_geod_length
227s > ###   lw_geodetic st_geod_segmentize lw_geodetic st_geod_covers
227s > 
227s > ### ** Examples
227s > 
227s > suppressPackageStartupMessages(library(sf))
227s > suppressPackageStartupMessages(library(lwgeom))
227s > suppressPackageStartupMessages(library(units))
227s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE)
227s > st_geod_area(nc[1:3,])
227s Units: [m^2]
227s [1] 1137388604  611077263 1423489919
227s > # st_area(nc[1:3,])
227s > l = st_sfc(st_linestring(rbind(c(7,52), c(8,53))), crs = 4326)
227s > st_geod_length(l)
227s 130359.3 [m]
227s > pol = st_polygon(list(rbind(c(0,0), c(0,60), c(60,60), c(0,0))))
227s > x = st_sfc(pol, crs = 4326)
227s > seg = st_geod_segmentize(x[1], set_units(10, km))
227s > plot(seg, graticule = TRUE, axes = TRUE)
227s > pole = st_polygon(list(rbind(c(0,80), c(120,80), c(240,80), c(0,80))))
227s > pt = st_point(c(0,90))
227s > x = st_sfc(pole, pt, crs = 4326)
227s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)])
227s Sparse geometry binary predicate list of length 3, where the predicate
227s was `covers'
227s  1: 1, 2, 3, 4
227s  2: 1, 2, 3, 4
227s  3: 1, 2, 3, 4
227s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)])
227s Sparse geometry binary predicate list of length 2, where the predicate
227s was `covered_by'
227s  1: 1, 2, 3
227s  2: 1, 2, 3
227s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)], sparse = FALSE)
227s      [,1] [,2] [,3] [,4]
227s [1,] TRUE TRUE TRUE TRUE
227s [2,] TRUE TRUE TRUE TRUE
227s [3,] TRUE TRUE TRUE TRUE
227s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)], sparse = FALSE)
227s      [,1] [,2] [,3]
227s [1,] TRUE TRUE TRUE
227s [2,] TRUE TRUE TRUE
227s > 
227s > # box crossing the dateline:
227s > #box = st_polygon(list(rbind(c(179.5,0), c(179.5,1), c(-179.5,1), c(-179.5,0), c(179.5,0))))
227s > box = st_polygon(list(rbind(c(179.5,0.1), c(179.5,1), c(-179.5,1), c(-179.5,0.1), c(179.5,0.1))))
227s > b = st_sfc(box, crs = 4326)
227s > units::set_units(st_geod_area(b), km^2) # approx 111^2
227s 11077.84 [km^2]
227s > 
227s > pt = st_point(c(30, 70))
227s > x = st_sfc(pole, pt, pt, crs = 4326)
227s > st_geod_distance(x, x)
227s Units: [m]
227s         [,1]    [,2]    [,3]
227s [1,]       0 1378923 1378923
227s [2,] 1378923       0       0
227s [3,] 1378923       0       0
227s > st_geod_distance(x, x, sparse = TRUE)
227s Sparse geometry binary predicate list of length 3, where the predicate
227s was `st_is_within_distance'
227s  1: 1
227s  2: 2, 3
227s  3: 2, 3
227s > st_geod_distance(x, x, tolerance = 1, sparse = TRUE)
227s Sparse geometry binary predicate list of length 3, where the predicate
227s was `st_is_within_distance'
227s  1: 1
227s  2: 2, 3
227s  3: 2, 3
227s > 
227s BEGIN TEST perimeter.R
227s 
227s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
227s Copyright (C) 2024 The R Foundation for Statistical Computing
227s Platform: aarch64-unknown-linux-gnu (64-bit)
227s 
227s R is free software and comes with ABSOLUTELY NO WARRANTY.
227s You are welcome to redistribute it under certain conditions.
227s Type 'license()' or 'licence()' for distribution details.
227s 
227s R is a collaborative project with many contributors.
227s Type 'contributors()' for more information and
227s 'citation()' on how to cite R or R packages in publications.
227s 
227s Type 'demo()' for some demos, 'help()' for on-line help, or
227s 'help.start()' for an HTML browser interface to help.
227s Type 'q()' to quit R.
227s 
228s > suppressPackageStartupMessages(library(lwgeom))
228s > suppressPackageStartupMessages(library(sf))
228s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE)
228s > nc = st_transform(nc, 3857)
228s > st_perimeter(nc)[1:5]
228s Units: [m]
228s [1] 176214.9 149265.4 199586.8 375137.8 263512.6
228s > st_perimeter_2d(nc)[1:5]
228s Units: [m]
228s [1] 176214.9 149265.4 199586.8 375137.8 263512.6
228s > 
228s BEGIN TEST testthat.R
228s 
228s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
228s Copyright (C) 2024 The R Foundation for Statistical Computing
228s Platform: aarch64-unknown-linux-gnu (64-bit)
228s 
228s R is free software and comes with ABSOLUTELY NO WARRANTY.
228s You are welcome to redistribute it under certain conditions.
228s Type 'license()' or 'licence()' for distribution details.
228s 
228s R is a collaborative project with many contributors.
228s Type 'contributors()' for more information and
228s 'citation()' on how to cite R or R packages in publications.
228s 
228s Type 'demo()' for some demos, 'help()' for on-line help, or
228s 'help.start()' for an HTML browser interface to help.
228s Type 'q()' to quit R.
228s 
228s > library(testthat)
228s > suppressPackageStartupMessages(library(sf))
229s > suppressPackageStartupMessages(library(lwgeom))
229s > 
229s > test_check("lwgeom")
230s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 61 ]
230s > 
230s BEGIN TEST twkb.R
230s 
230s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
230s Copyright (C) 2024 The R Foundation for Statistical Computing
230s Platform: aarch64-unknown-linux-gnu (64-bit)
230s 
230s R is free software and comes with ABSOLUTELY NO WARRANTY.
230s You are welcome to redistribute it under certain conditions.
230s Type 'license()' or 'licence()' for distribution details.
230s 
230s R is a collaborative project with many contributors.
230s Type 'contributors()' for more information and
230s 'citation()' on how to cite R or R packages in publications.
230s 
230s Type 'demo()' for some demos, 'help()' for on-line help, or
230s 'help.start()' for an HTML browser interface to help.
230s Type 'q()' to quit R.
230s 
230s > l = structure(list(as.raw(c(0x02, 0x00, 0x02, 0x02, 0x02, 0x08, 0x08))), class = "TWKB")
230s > suppressPackageStartupMessages(library(sf))
230s > suppressPackageStartupMessages(library(lwgeom))
230s > st_as_sfc(l)
230s Geometry set for 1 feature 
230s Geometry type: LINESTRING
230s Dimension:     XY
230s Bounding box:  xmin: 1 ymin: 1 xmax: 5 ymax: 5
230s CRS:           NA
230s LINESTRING (1 1, 5 5)
230s LINESTRING (1 1, 5 5)
230s LINESTRING (1 1, 5 5)
230s > st_as_sfc(structure(list(l[[1]], l[[1]]), class = "TWKB"))
230s Geometry set for 2 features 
230s Geometry type: LINESTRING
230s Dimension:     XY
230s Bounding box:  xmin: 1 ymin: 1 xmax: 5 ymax: 5
230s CRS:           NA
230s > 
230s autopkgtest [19:11:08]: test run-unit-test: -----------------------]
231s autopkgtest [19:11:09]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
231s run-unit-test        PASS
231s autopkgtest [19:11:09]: test pkg-r-autopkgtest: preparing testbed
233s Reading package lists...
233s Building dependency tree...
233s Reading state information...
234s Starting pkgProblemResolver with broken count: 0
234s Starting 2 pkgProblemResolver with broken count: 0
234s Done
234s The following additional packages will be installed:
234s   build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu
234s   dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
234s   gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13
234s   gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
234s   libasan8 libatomic1 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0
234s   libcrypt-dev libgcc-13-dev libgfortran-13-dev libhwasan0 libicu-dev libisl23
234s   libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0
234s   liblzma-dev libmpc3 libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0
234s   libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev
234s   libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config
234s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev
234s Suggested packages:
234s   cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib
234s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
234s   gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev
234s   liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc
234s   libstdc++-13-doc texlive-base texlive-latex-base texlive-plain-generic
234s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
234s   texlive-latex-recommended texlive-latex-extra texinfo
234s Recommended packages:
234s   bzip2-doc manpages manpages-dev libc-devtools libpng-tools
234s The following NEW packages will be installed:
234s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu
234s   cpp-aarch64-linux-gnu dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu
234s   g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu
234s   gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu
234s   gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev
234s   libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev
234s   libgfortran-13-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
234s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
234s   libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
234s   libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev
234s   libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config pkg-r-autopkgtest
234s   pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev
234s 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded.
234s Need to get 92.8 MB/92.8 MB of archives.
234s After this operation, 343 MB of additional disk space will be used.
234s Get:1 /tmp/autopkgtest.6ukvGa/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [740 B]
235s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB]
235s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB]
235s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB]
235s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB]
235s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB]
235s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB]
235s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB]
235s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB]
235s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB]
235s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB]
236s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B]
236s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B]
236s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB]
236s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB]
236s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB]
236s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
236s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB]
236s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB]
236s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB]
236s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB]
236s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB]
236s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB]
236s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB]
236s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB]
236s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B]
236s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B]
236s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB]
236s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB]
237s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB]
237s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B]
237s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B]
237s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
237s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
237s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB]
237s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB]
237s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB]
237s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B]
237s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B]
237s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB]
237s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB]
237s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB]
237s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB]
237s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB]
237s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
237s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
237s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB]
237s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB]
237s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB]
237s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB]
237s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B]
237s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB]
237s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB]
237s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB]
237s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB]
237s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB]
237s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB]
237s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB]
237s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B]
237s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB]
237s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B]
237s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
238s Fetched 92.8 MB in 3s (30.1 MB/s)
238s Selecting previously unselected package libc-dev-bin.
238s (Reading database ... 
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238s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_arm64.deb ...
239s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
239s Selecting previously unselected package linux-libc-dev:arm64.
239s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_arm64.deb ...
239s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ...
239s Selecting previously unselected package libcrypt-dev:arm64.
239s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_arm64.deb ...
239s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ...
239s Selecting previously unselected package libtirpc-dev:arm64.
239s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ...
239s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ...
239s Selecting previously unselected package libnsl-dev:arm64.
239s Preparing to unpack .../04-libnsl-dev_1.3.0-3_arm64.deb ...
239s Unpacking libnsl-dev:arm64 (1.3.0-3) ...
239s Selecting previously unselected package rpcsvc-proto.
239s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ...
239s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
239s Selecting previously unselected package libc6-dev:arm64.
239s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_arm64.deb ...
239s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ...
239s Selecting previously unselected package libisl23:arm64.
239s Preparing to unpack .../07-libisl23_0.26-3_arm64.deb ...
239s Unpacking libisl23:arm64 (0.26-3) ...
239s Selecting previously unselected package libmpc3:arm64.
239s Preparing to unpack .../08-libmpc3_1.3.1-1_arm64.deb ...
239s Unpacking libmpc3:arm64 (1.3.1-1) ...
239s Selecting previously unselected package cpp-13-aarch64-linux-gnu.
239s Preparing to unpack .../09-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
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239s Selecting previously unselected package cpp-13.
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239s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
239s Selecting previously unselected package cpp-aarch64-linux-gnu.
239s Preparing to unpack .../11-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
239s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
239s Selecting previously unselected package cpp.
239s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ...
239s Unpacking cpp (4:13.2.0-7ubuntu1) ...
239s Selecting previously unselected package libcc1-0:arm64.
239s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_arm64.deb ...
239s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ...
239s Selecting previously unselected package libitm1:arm64.
239s Preparing to unpack .../14-libitm1_14-20240303-1ubuntu1_arm64.deb ...
239s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ...
239s Selecting previously unselected package libatomic1:arm64.
239s Preparing to unpack .../15-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
239s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
239s Selecting previously unselected package libasan8:arm64.
239s Preparing to unpack .../16-libasan8_14-20240303-1ubuntu1_arm64.deb ...
239s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ...
240s Selecting previously unselected package liblsan0:arm64.
240s Preparing to unpack .../17-liblsan0_14-20240303-1ubuntu1_arm64.deb ...
240s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ...
240s Selecting previously unselected package libtsan2:arm64.
240s Preparing to unpack .../18-libtsan2_14-20240303-1ubuntu1_arm64.deb ...
240s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ...
240s Selecting previously unselected package libubsan1:arm64.
240s Preparing to unpack .../19-libubsan1_14-20240303-1ubuntu1_arm64.deb ...
240s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ...
240s Selecting previously unselected package libhwasan0:arm64.
240s Preparing to unpack .../20-libhwasan0_14-20240303-1ubuntu1_arm64.deb ...
240s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ...
240s Selecting previously unselected package libgcc-13-dev:arm64.
240s Preparing to unpack .../21-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ...
240s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
240s Selecting previously unselected package gcc-13-aarch64-linux-gnu.
240s Preparing to unpack .../22-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
240s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
240s Selecting previously unselected package gcc-13.
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240s Unpacking gcc-13 (13.2.0-17ubuntu2) ...
240s Selecting previously unselected package gcc-aarch64-linux-gnu.
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240s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
240s Selecting previously unselected package gcc.
240s Preparing to unpack .../25-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ...
240s Unpacking gcc (4:13.2.0-7ubuntu1) ...
240s Selecting previously unselected package libstdc++-13-dev:arm64.
240s Preparing to unpack .../26-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ...
240s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
241s Selecting previously unselected package g++-13-aarch64-linux-gnu.
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241s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
241s Selecting previously unselected package g++-13.
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241s Unpacking g++-13 (13.2.0-17ubuntu2) ...
241s Selecting previously unselected package g++-aarch64-linux-gnu.
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241s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
241s Selecting previously unselected package g++.
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241s Selecting previously unselected package build-essential.
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241s Selecting previously unselected package dctrl-tools.
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241s Selecting previously unselected package libgfortran-13-dev:arm64.
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241s Selecting previously unselected package gfortran-13-aarch64-linux-gnu.
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241s Selecting previously unselected package gfortran-13.
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241s Selecting previously unselected package gfortran-aarch64-linux-gnu.
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241s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
241s Selecting previously unselected package gfortran.
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241s Selecting previously unselected package icu-devtools.
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241s Selecting previously unselected package libblas-dev:arm64.
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241s Selecting previously unselected package libbz2-dev:arm64.
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241s Selecting previously unselected package libicu-dev:arm64.
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241s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ...
242s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
242s Preparing to unpack .../42-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ...
242s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
242s Selecting previously unselected package libjpeg8-dev:arm64.
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243s Setting up autopkgtest-satdep (0) ...
243s Processing triggers for man-db (2.12.0-3) ...
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243s Processing triggers for libc-bin (2.39-0ubuntu2) ...
247s (Reading database ... 87200 files and directories currently installed.)
247s Removing autopkgtest-satdep (0) ...
247s autopkgtest [19:11:25]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
247s autopkgtest [19:11:25]: test pkg-r-autopkgtest: [-----------------------
247s Test: Try to load the R library lwgeom
248s 
248s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
248s Copyright (C) 2024 The R Foundation for Statistical Computing
248s Platform: aarch64-unknown-linux-gnu (64-bit)
248s 
248s R is free software and comes with ABSOLUTELY NO WARRANTY.
248s You are welcome to redistribute it under certain conditions.
248s Type 'license()' or 'licence()' for distribution details.
248s 
248s R is a collaborative project with many contributors.
248s Type 'contributors()' for more information and
248s 'citation()' on how to cite R or R packages in publications.
248s 
248s Type 'demo()' for some demos, 'help()' for on-line help, or
248s 'help.start()' for an HTML browser interface to help.
248s Type 'q()' to quit R.
248s 
248s > library('lwgeom')
249s > 
249s > 
249s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.12.1, PROJ 9.3.1
249s Other tests are currently unsupported!
249s They will be progressively added.
249s autopkgtest [19:11:27]: test pkg-r-autopkgtest: -----------------------]
250s autopkgtest [19:11:28]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
250s pkg-r-autopkgtest    PASS
250s autopkgtest [19:11:28]: @@@@@@@@@@@@@@@@@@@@ summary
250s run-unit-test        PASS
250s pkg-r-autopkgtest    PASS
261s Creating nova instance adt-noble-arm64-r-cran-lwgeom-20240316-190718-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...