0s autopkgtest [19:00:11]: starting date and time: 2024-03-16 19:00:11+0000 0s autopkgtest [19:00:11]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:00:11]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.w13pu_k2/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-learnbayes --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-2.secgroup --name adt-noble-arm64-r-cran-learnbayes-20240316-190011-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 73s autopkgtest [19:01:24]: testbed dpkg architecture: arm64 74s autopkgtest [19:01:25]: testbed apt version: 2.7.12 74s autopkgtest [19:01:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 74s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 75s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 75s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 75s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 75s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 75s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 75s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 75s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 75s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 75s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB] 75s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 75s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 75s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 77s Fetched 9084 kB in 2s (5072 kB/s) 77s Reading package lists... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 82s Calculating upgrade... 83s The following packages will be REMOVED: 83s libglib2.0-0 libssl3 83s The following NEW packages will be installed: 83s libglib2.0-0t64 libssl3t64 xdg-user-dirs 83s The following packages have been kept back: 83s curl 83s The following packages will be upgraded: 83s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 83s ubuntu-minimal ubuntu-standard 84s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 84s Need to get 4613 kB of archives. 84s After this operation, 211 kB of additional disk space will be used. 84s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 84s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 84s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 84s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 84s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 84s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 84s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 84s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 84s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 84s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 85s Fetched 4613 kB in 1s (6421 kB/s) 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 85s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 85s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 85s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 85s udisks2 depends on libglib2.0-0 (>= 2.77.0). 85s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 85s python3-gi depends on libglib2.0-0 (>= 2.77.0). 85s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 85s netplan.io depends on libglib2.0-0 (>= 2.70.0). 85s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 85s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 85s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 85s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 85s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 85s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 85s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 85s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 85s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 85s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 85s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 85s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 85s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 85s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 85s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 85s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 85s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 85s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 85s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 85s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 85s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 85s fwupd depends on libglib2.0-0 (>= 2.79.0). 85s bolt depends on libglib2.0-0 (>= 2.56.0). 85s 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 85s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 85s Selecting previously unselected package libglib2.0-0t64:arm64. 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 85s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 85s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 85s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 85s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 85s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 85s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 85s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 85s wget depends on libssl3 (>= 3.0.0). 85s u-boot-tools depends on libssl3 (>= 3.0.0). 85s tnftp depends on libssl3 (>= 3.0.0). 85s tcpdump depends on libssl3 (>= 3.0.0). 85s systemd-resolved depends on libssl3 (>= 3.0.0). 85s systemd depends on libssl3 (>= 3.0.0). 85s sudo depends on libssl3 (>= 3.0.0). 85s sbsigntool depends on libssl3 (>= 3.0.0). 85s rsync depends on libssl3 (>= 3.0.0). 85s python3-cryptography depends on libssl3 (>= 3.0.0). 85s openssh-server depends on libssl3 (>= 3.0.10). 85s openssh-client depends on libssl3 (>= 3.0.10). 85s mtd-utils depends on libssl3 (>= 3.0.0). 85s mokutil depends on libssl3 (>= 3.0.0). 85s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 85s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 85s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 85s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 85s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 85s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 85s libnvme1 depends on libssl3 (>= 3.0.0). 85s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 85s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 85s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 85s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 85s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 85s kmod depends on libssl3 (>= 3.0.0). 85s dhcpcd-base depends on libssl3 (>= 3.0.0). 85s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 85s 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 85s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 86s Selecting previously unselected package libssl3t64:arm64. 86s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 86s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 86s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 86s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 86s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 86s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 86s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 86s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 86s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 86s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 86s Unpacking ubuntu-minimal (1.536) over (1.535) ... 86s Selecting previously unselected package xdg-user-dirs. 86s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 86s Unpacking xdg-user-dirs (0.18-1) ... 86s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 86s Unpacking ubuntu-standard (1.536) over (1.535) ... 86s Setting up ubuntu-minimal (1.536) ... 86s Setting up xdg-user-dirs (0.18-1) ... 86s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 86s Setting up libtirpc-common (1.3.4+ds-1.1) ... 86s Setting up ubuntu-standard (1.536) ... 86s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 86s No schema files found: doing nothing. 86s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 86s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 86s Setting up openssl (3.0.13-0ubuntu1) ... 86s Setting up readline-common (8.2-3.1) ... 86s Processing triggers for man-db (2.12.0-3) ... 87s Processing triggers for install-info (7.1-3) ... 87s Processing triggers for libc-bin (2.39-0ubuntu2) ... 87s Reading package lists... 88s Building dependency tree... 88s Reading state information... 89s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 90s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 90s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 90s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 90s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 92s Reading package lists... 92s Reading package lists... 92s Building dependency tree... 92s Reading state information... 93s Calculating upgrade... 93s The following packages have been kept back: 93s curl 93s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 93s Reading package lists... 94s Building dependency tree... 94s Reading state information... 94s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 97s autopkgtest [19:01:48]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 97s autopkgtest [19:01:48]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-learnbayes 99s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-learnbayes 2.15.1-4build1 (dsc) [2089 B] 99s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-learnbayes 2.15.1-4build1 (tar) [795 kB] 99s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-learnbayes 2.15.1-4build1 (diff) [2856 B] 100s gpgv: Signature made Sat May 30 10:10:34 2020 UTC 100s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 100s gpgv: Can't check signature: No public key 100s dpkg-source: warning: cannot verify inline signature for ./r-cran-learnbayes_2.15.1-4build1.dsc: no acceptable signature found 100s autopkgtest [19:01:51]: testing package r-cran-learnbayes version 2.15.1-4build1 100s autopkgtest [19:01:51]: build not needed 101s autopkgtest [19:01:52]: test run-unit-test: preparing testbed 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Starting pkgProblemResolver with broken count: 0 102s Starting 2 pkgProblemResolver with broken count: 0 102s Done 103s The following additional packages will be installed: 103s curl fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 103s libblas3 libcairo2 libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 103s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 103s libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 103s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 103s libpng16-16t64 libpsl5t64 libreadline8t64 libsharpyuv0 libsm6 libtcl8.6 103s libthai-data libthai0 libtiff6 libtirpc3t64 libtk8.6 libwebp7 libxcb-render0 103s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core 103s r-cran-learnbayes unzip x11-common xdg-utils zip 103s Suggested packages: 103s tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 103s Recommended packages: 103s r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl 103s libx11-protocol-perl x11-utils x11-xserver-utils 103s The following packages will be REMOVED: 103s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 103s The following NEW packages will be installed: 103s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 103s fonts-dejavu-mono libblas3 libcairo2 libcurl4t64 libdatrie1 libdeflate0 103s libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 103s libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 103s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 103s libpng16-16t64 libpsl5t64 libreadline8t64 libsharpyuv0 libsm6 libtcl8.6 103s libthai-data libthai0 libtiff6 libtirpc3t64 libtk8.6 libwebp7 libxcb-render0 103s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core 103s r-cran-learnbayes unzip x11-common xdg-utils zip 103s The following packages will be upgraded: 103s curl 103s 1 upgraded, 51 newly installed, 5 to remove and 0 not upgraded. 103s Need to get 38.6 MB/38.6 MB of archives. 103s After this operation, 76.6 MB of additional disk space will be used. 103s Get:1 /tmp/autopkgtest.yZWd5L/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 103s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 103s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 104s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 104s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 104s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 104s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 104s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 104s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 104s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 104s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 104s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 104s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 104s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 104s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 104s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 104s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 104s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 104s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 104s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 104s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 104s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 104s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 104s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 104s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 104s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 104s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 104s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 104s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 104s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 104s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 104s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 104s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 104s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 104s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 104s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 104s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 104s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 104s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 104s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 104s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 104s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 104s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 104s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 104s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 104s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 104s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 104s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 104s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 104s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 104s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 105s Get:52 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-learnbayes all 2.15.1-4build1 [963 kB] 105s Preconfiguring packages ... 105s Fetched 38.6 MB in 2s (21.9 MB/s) 105s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 105s wget depends on libpsl5 (>= 0.16.0). 105s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 105s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 105s 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 105s Removing libpsl5:arm64 (0.21.2-1build1) ... 106s Selecting previously unselected package libpsl5t64:arm64. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 106s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 106s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 106s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 106s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 106s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 106s Selecting previously unselected package libcurl4t64:arm64. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 106s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 106s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 106s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 106s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 106s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 106s 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 106s Removing libpng16-16:arm64 (1.6.43-1) ... 106s Selecting previously unselected package libpng16-16t64:arm64. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 106s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 106s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 106s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 106s parted depends on libreadline8 (>= 6.0). 106s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 106s gpgsm depends on libreadline8 (>= 6.0). 106s gpgconf depends on libreadline8 (>= 6.0). 106s gpg depends on libreadline8 (>= 6.0). 106s gawk depends on libreadline8 (>= 6.0). 106s fdisk depends on libreadline8 (>= 6.0). 106s 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 106s Removing libreadline8:arm64 (8.2-3) ... 106s Selecting previously unselected package libreadline8t64:arm64. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 106s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 106s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 106s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 106s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 106s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 106s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 106s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 106s lsof depends on libtirpc3 (>= 1.0.2). 106s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 106s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 106s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 106s iproute2 depends on libtirpc3 (>= 1.0.2). 106s 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 107s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 107s Selecting previously unselected package libtirpc3t64:arm64. 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 107s Preparing to unpack .../00-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 107s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 107s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 107s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 107s Selecting previously unselected package fonts-dejavu-mono. 107s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 107s Unpacking fonts-dejavu-mono (2.37-8) ... 107s Selecting previously unselected package fonts-dejavu-core. 107s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 107s Unpacking fonts-dejavu-core (2.37-8) ... 107s Selecting previously unselected package fontconfig-config. 107s Preparing to unpack .../03-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 107s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 107s Selecting previously unselected package libfontconfig1:arm64. 107s Preparing to unpack .../04-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 107s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 107s Selecting previously unselected package fontconfig. 107s Preparing to unpack .../05-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 107s Unpacking fontconfig (2.15.0-1ubuntu1) ... 107s Selecting previously unselected package libblas3:arm64. 107s Preparing to unpack .../06-libblas3_3.12.0-3_arm64.deb ... 107s Unpacking libblas3:arm64 (3.12.0-3) ... 107s Selecting previously unselected package libpixman-1-0:arm64. 107s Preparing to unpack .../07-libpixman-1-0_0.42.2-1_arm64.deb ... 107s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 107s Selecting previously unselected package libxcb-render0:arm64. 107s Preparing to unpack .../08-libxcb-render0_1.15-1_arm64.deb ... 107s Unpacking libxcb-render0:arm64 (1.15-1) ... 107s Selecting previously unselected package libxcb-shm0:arm64. 107s Preparing to unpack .../09-libxcb-shm0_1.15-1_arm64.deb ... 107s Unpacking libxcb-shm0:arm64 (1.15-1) ... 107s Selecting previously unselected package libxrender1:arm64. 107s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 107s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 107s Selecting previously unselected package libcairo2:arm64. 107s Preparing to unpack .../11-libcairo2_1.18.0-1_arm64.deb ... 107s Unpacking libcairo2:arm64 (1.18.0-1) ... 107s Selecting previously unselected package libdatrie1:arm64. 107s Preparing to unpack .../12-libdatrie1_0.2.13-3_arm64.deb ... 107s Unpacking libdatrie1:arm64 (0.2.13-3) ... 107s Selecting previously unselected package libdeflate0:arm64. 107s Preparing to unpack .../13-libdeflate0_1.19-1_arm64.deb ... 107s Unpacking libdeflate0:arm64 (1.19-1) ... 107s Selecting previously unselected package libgfortran5:arm64. 107s Preparing to unpack .../14-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 107s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 107s Selecting previously unselected package libgomp1:arm64. 107s Preparing to unpack .../15-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 107s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 107s Selecting previously unselected package libgraphite2-3:arm64. 107s Preparing to unpack .../16-libgraphite2-3_1.3.14-2_arm64.deb ... 107s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 107s Selecting previously unselected package libharfbuzz0b:arm64. 107s Preparing to unpack .../17-libharfbuzz0b_8.3.0-2_arm64.deb ... 107s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 107s Selecting previously unselected package x11-common. 107s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu2_all.deb ... 107s Unpacking x11-common (1:7.7+23ubuntu2) ... 108s Selecting previously unselected package libice6:arm64. 108s Preparing to unpack .../19-libice6_2%3a1.0.10-1build2_arm64.deb ... 108s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 108s Selecting previously unselected package libjpeg-turbo8:arm64. 108s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 108s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 108s Selecting previously unselected package libjpeg8:arm64. 108s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_arm64.deb ... 108s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 108s Selecting previously unselected package liblapack3:arm64. 108s Preparing to unpack .../22-liblapack3_3.12.0-3_arm64.deb ... 108s Unpacking liblapack3:arm64 (3.12.0-3) ... 108s Selecting previously unselected package liblerc4:arm64. 108s Preparing to unpack .../23-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 108s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 108s Selecting previously unselected package libthai-data. 108s Preparing to unpack .../24-libthai-data_0.1.29-2_all.deb ... 108s Unpacking libthai-data (0.1.29-2) ... 108s Selecting previously unselected package libthai0:arm64. 108s Preparing to unpack .../25-libthai0_0.1.29-2_arm64.deb ... 108s Unpacking libthai0:arm64 (0.1.29-2) ... 108s Selecting previously unselected package libpango-1.0-0:arm64. 108s Preparing to unpack .../26-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 108s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 108s Selecting previously unselected package libpangoft2-1.0-0:arm64. 108s Preparing to unpack .../27-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 108s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 108s Selecting previously unselected package libpangocairo-1.0-0:arm64. 108s Preparing to unpack .../28-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 108s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 108s Selecting previously unselected package libpaper1:arm64. 108s Preparing to unpack .../29-libpaper1_1.1.29_arm64.deb ... 108s Unpacking libpaper1:arm64 (1.1.29) ... 108s Selecting previously unselected package libpaper-utils. 108s Preparing to unpack .../30-libpaper-utils_1.1.29_arm64.deb ... 108s Unpacking libpaper-utils (1.1.29) ... 108s Selecting previously unselected package libsharpyuv0:arm64. 108s Preparing to unpack .../31-libsharpyuv0_1.3.2-0.4_arm64.deb ... 108s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 108s Selecting previously unselected package libsm6:arm64. 108s Preparing to unpack .../32-libsm6_2%3a1.2.3-1build2_arm64.deb ... 108s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 108s Selecting previously unselected package libtcl8.6:arm64. 108s Preparing to unpack .../33-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 108s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 108s Selecting previously unselected package libjbig0:arm64. 108s Preparing to unpack .../34-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 108s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 108s Selecting previously unselected package libwebp7:arm64. 108s Preparing to unpack .../35-libwebp7_1.3.2-0.4_arm64.deb ... 108s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 108s Selecting previously unselected package libtiff6:arm64. 108s Preparing to unpack .../36-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 108s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 108s Selecting previously unselected package libxft2:arm64. 108s Preparing to unpack .../37-libxft2_2.3.6-1_arm64.deb ... 108s Unpacking libxft2:arm64 (2.3.6-1) ... 108s Selecting previously unselected package libxss1:arm64. 108s Preparing to unpack .../38-libxss1_1%3a1.2.3-1build2_arm64.deb ... 108s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 108s Selecting previously unselected package libtk8.6:arm64. 109s Preparing to unpack .../39-libtk8.6_8.6.13-2_arm64.deb ... 109s Unpacking libtk8.6:arm64 (8.6.13-2) ... 109s Selecting previously unselected package libxt6t64:arm64. 109s Preparing to unpack .../40-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 109s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 109s Selecting previously unselected package zip. 109s Preparing to unpack .../41-zip_3.0-13_arm64.deb ... 109s Unpacking zip (3.0-13) ... 109s Selecting previously unselected package unzip. 109s Preparing to unpack .../42-unzip_6.0-28ubuntu3_arm64.deb ... 109s Unpacking unzip (6.0-28ubuntu3) ... 109s Selecting previously unselected package xdg-utils. 109s Preparing to unpack .../43-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 109s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 109s Selecting previously unselected package r-base-core. 109s Preparing to unpack .../44-r-base-core_4.3.3-2build1_arm64.deb ... 109s Unpacking r-base-core (4.3.3-2build1) ... 109s Selecting previously unselected package r-cran-learnbayes. 109s Preparing to unpack .../45-r-cran-learnbayes_2.15.1-4build1_all.deb ... 109s Unpacking r-cran-learnbayes (2.15.1-4build1) ... 109s Selecting previously unselected package autopkgtest-satdep. 109s Preparing to unpack .../46-1-autopkgtest-satdep.deb ... 109s Unpacking autopkgtest-satdep (0) ... 109s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 109s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 109s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 109s Setting up libpaper1:arm64 (1.1.29) ... 110s 110s Creating config file /etc/papersize with new version 110s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 110s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 110s Setting up libdatrie1:arm64 (0.2.13-3) ... 110s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 110s Setting up libxcb-render0:arm64 (1.15-1) ... 110s Setting up unzip (6.0-28ubuntu3) ... 110s Setting up x11-common (1:7.7+23ubuntu2) ... 110s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 110s Setting up libdeflate0:arm64 (1.19-1) ... 110s Setting up libxcb-shm0:arm64 (1.15-1) ... 110s Setting up libpaper-utils (1.1.29) ... 110s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 110s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 110s Setting up zip (3.0-13) ... 110s Setting up libblas3:arm64 (3.12.0-3) ... 110s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 110s Setting up fonts-dejavu-mono (2.37-8) ... 110s Setting up libpng16-16t64:arm64 (1.6.43-3) ... 110s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 110s Setting up fonts-dejavu-core (2.37-8) ... 110s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 110s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 110s Setting up libwebp7:arm64 (1.3.2-0.4) ... 110s Setting up libreadline8t64:arm64 (8.2-3.1) ... 110s 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[----------------------- 120s 120s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 120s Copyright (C) 2024 The R Foundation for Statistical Computing 120s Platform: aarch64-unknown-linux-gnu (64-bit) 120s 120s R is free software and comes with ABSOLUTELY NO WARRANTY. 120s You are welcome to redistribute it under certain conditions. 120s Type 'license()' or 'licence()' for distribution details. 120s 120s R is a collaborative project with many contributors. 120s Type 'contributors()' for more information and 120s 'citation()' on how to cite R or R packages in publications. 120s 120s Type 'demo()' for some demos, 'help()' for on-line help, or 120s 'help.start()' for an HTML browser interface to help. 120s Type 'q()' to quit R. 120s 120s > Stangle("BayesFactors.Rnw") 120s Writing to file BayesFactors.R 120s > source("BayesFactors.R", echo=TRUE) 120s 120s > fire.counts <- c(75, 88, 84, 99, 79, 68, 86, 109, 120s + 73, 85, 101, 85, 75, 81, 64, 77, 83, 83, 88, 83, 78, 83, 120s + 78, 80, 82, 90, 74, 72, 69, .... [TRUNCATED] 120s 120s > hist(fire.counts, probability = TRUE, ylim = c(0, 120s + 0.08)) 120s 120s > x <- 60:110 120s 120s > lines(x, dpois(x, lambda = mean(fire.counts)), col = "red") 120s 120s > lines(x, dnorm(x, mean = mean(fire.counts), sd = 12), 120s + col = "blue") 120s 120s > lines(x, dnorm(x, mean = mean(fire.counts), sd = 6), 120s + col = "green") 120s 120s > legend("topright", legend = c("M1: Poisson(theta)", 120s + "M2: N(theta, 12)", "M3: N(theta, 6)"), col = c("red", "blue", 120s + "green"), lty = 1) 120s 120s > model.1 <- function(theta, y) { 120s + sum(log(dpois(y, theta))) + dgamma(theta, shape = 280, rate = 4) 120s + } 120s 120s > library(LearnBayes) 120s 120s > log.pred.1 <- laplace(model.1, 80, fire.counts)$int 120s 120s > log.pred.1 120s [1] -131.6253 120s 120s > model.2 <- function(theta, y) { 120s + sum(log(dnorm(y, theta, 6))) + dgamma(theta, shape = 280, 120s + rate = 4) 120s + } 120s 120s > model.3 <- function(theta, y) { 120s + sum(log(dnorm(y, theta, 12))) + dgamma(theta, shape = 280, 120s + rate = 4) 120s + } 120s 120s > log.pred.2 <- laplace(model.2, 80, fire.counts)$int 120s 120s > log.pred.3 <- laplace(model.3, 80, fire.counts)$int 120s 120s > data.frame(Model = 1:3, log.pred = c(log.pred.1, log.pred.2, 120s + log.pred.3)) 120s Model log.pred 120s 1 1 -131.6253 120s 2 2 -144.7554 120s 3 3 -132.9464 120s 120s > exp(log.pred.1 - log.pred.3) 120s [1] 3.74751 120s > 120s 120s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 120s Copyright (C) 2024 The R Foundation for Statistical Computing 120s Platform: aarch64-unknown-linux-gnu (64-bit) 120s 120s R is free software and comes with ABSOLUTELY NO WARRANTY. 120s You are welcome to redistribute it under certain conditions. 120s Type 'license()' or 'licence()' for distribution details. 120s 120s R is a collaborative project with many contributors. 120s Type 'contributors()' for more information and 120s 'citation()' on how to cite R or R packages in publications. 120s 120s Type 'demo()' for some demos, 'help()' for on-line help, or 120s 'help.start()' for an HTML browser interface to help. 120s Type 'q()' to quit R. 120s 120s > Stangle("BinomialInference.Rnw") 120s Writing to file BinomialInference.R 120s > source("BinomialInference.R", echo=TRUE) 120s 120s > library(LearnBayes) 120s 120s > beta.par <- beta.select(list(p = 0.5, x = 0.2), list(p = 0.75, 120s + x = 0.28)) 120s 120s > beta.par 120s [1] 2.95 10.82 120s 120s > triplot(beta.par, c(6, 4)) 120s 120s > beta.post.par <- beta.par + c(6, 4) 120s 120s > post.sample <- rbeta(1000, beta.post.par[1], beta.post.par[2]) 120s 120s > quantile(post.sample, c(0.05, 0.95)) 120s 5% 95% 120s 0.2274838 0.5334426 120s 120s > predplot(beta.par, 10, 6) 120s 120s > n <- 20 120s 120s > s <- 0:n 120s 120s > pred.probs <- pbetap(beta.par, n, s) 120s 120s > plot(s, pred.probs, type = "h") 120s 120s > discint(cbind(s, pred.probs), 0.9) 120s $prob 120s [1] 0.9181962 120s 120s $set 120s [1] 0 1 2 3 4 5 6 7 8 120s 120s > 120s 120s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 120s Copyright (C) 2024 The R Foundation for Statistical Computing 120s Platform: aarch64-unknown-linux-gnu (64-bit) 120s 120s R is free software and comes with ABSOLUTELY NO WARRANTY. 120s You are welcome to redistribute it under certain conditions. 120s Type 'license()' or 'licence()' for distribution details. 120s 120s R is a collaborative project with many contributors. 120s Type 'contributors()' for more information and 120s 'citation()' on how to cite R or R packages in publications. 120s 120s Type 'demo()' for some demos, 'help()' for on-line help, or 120s 'help.start()' for an HTML browser interface to help. 120s Type 'q()' to quit R. 120s 120s > Stangle("DiscreteBayes.Rnw") 120s Writing to file DiscreteBayes.R 120s > source("DiscreteBayes.R", echo=TRUE) 120s 120s > p <- seq(0, 1, by = 0.01) 120s 120s > prior <- 1/101 + 0 * p 120s 120s > plot(p, prior, type = "h", main = "Prior Distribution") 120s 120s > library(LearnBayes) 120s 120s > post <- pdisc(p, prior, c(20, 12)) 120s 120s > plot(p, post, type = "h", main = "Posterior Distribution") 120s 120s > discint(cbind(p, post), 0.9) 120s $prob 120s [1] 0.9001245 120s 120s $set 120s [1] 0.49 0.50 0.51 0.52 0.53 0.54 0.55 0.56 0.57 0.58 0.59 0.60 0.61 0.62 0.63 120s [16] 0.64 0.65 0.66 0.67 0.68 0.69 0.70 0.71 0.72 0.73 0.74 0.75 120s 120s 120s > n <- 20 120s 120s > s <- 0:20 120s 120s > pred.probs <- pdiscp(p, post, n, s) 120s 120s > plot(s, pred.probs, type = "h", main = "Predictive Distribution") 120s 120s > prior <- rep(1/11, 11) 120s 120s > names(prior) <- 20:30 120s 120s > y <- c(24, 25, 31, 31, 22, 21, 26, 20, 16, 22) 120s 120s > post <- discrete.bayes(dpois, prior, y) 120s 120s > print(post) 120s 20 21 22 23 24 25 120s 0.0086284462 0.0432554621 0.1263286996 0.2255195224 0.2566196329 0.1931041454 120s 26 27 28 29 30 120s 0.0992616593 0.0358720144 0.0093507519 0.0017989279 0.0002607378 120s 120s > plot(post) 120s 120s > summary(post) 120s $mean 120s [1] 23.90475 120s 120s $sd 120s [1] 1.538209 120s 120s $coverage 120s [1] 0.9008337 120s 120s $set 120s [1] 22 23 24 25 26 120s 120s > 121s 121s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 121s Copyright (C) 2024 The R Foundation for Statistical Computing 121s Platform: aarch64-unknown-linux-gnu (64-bit) 121s 121s R is free software and comes with ABSOLUTELY NO WARRANTY. 121s You are welcome to redistribute it under certain conditions. 121s Type 'license()' or 'licence()' for distribution details. 121s 121s R is a collaborative project with many contributors. 121s Type 'contributors()' for more information and 121s 'citation()' on how to cite R or R packages in publications. 121s 121s Type 'demo()' for some demos, 'help()' for on-line help, or 121s 'help.start()' for an HTML browser interface to help. 121s Type 'q()' to quit R. 121s 121s > Stangle("MCMCintro.Rnw") 121s Writing to file MCMCintro.R 121s > source("MCMCintro.R", echo=TRUE) 121s 121s > minmaxpost <- function(theta, data) { 121s + mu <- theta[1] 121s + sigma <- exp(theta[2]) 121s + dnorm(data$min, mu, sigma, log = TRUE) + dnorm(data$ma .... [TRUNCATED] 121s 121s > data <- list(n = 10, min = 52, max = 84) 121s 121s > library(LearnBayes) 121s 121s > fit <- laplace(minmaxpost, c(70, 2), data) 121s 121s > fit 121s $mode 121s [1] 67.999960 2.298369 121s 121s $var 121s [,1] [,2] 121s [1,] 1.920690e+01 -1.901459e-06 121s [2,] -1.901459e-06 6.031533e-02 121s 121s $int 121s [1] -8.020139 121s 121s $converge 121s [1] TRUE 121s 121s 121s > mycontour(minmaxpost, c(45, 95, 1.5, 4), data, xlab = expression(mu), 121s + ylab = expression(paste("log ", sigma))) 121s 121s > mycontour(lbinorm, c(45, 95, 1.5, 4), list(m = fit$mode, 121s + v = fit$var), add = TRUE, col = "red") 121s 121s > mcmc.fit <- rwmetrop(minmaxpost, list(var = fit$v, 121s + scale = 3), c(70, 2), 10000, data) 121s 121s > mcmc.fit$accept 121s [1] 0.1713 121s 121s > mycontour(minmaxpost, c(45, 95, 1.5, 4), data, xlab = expression(mu), 121s + ylab = expression(paste("log ", sigma))) 121s 121s > points(mcmc.fit$par) 121s 121s > mu <- mcmc.fit$par[, 1] 121s 121s > sigma <- exp(mcmc.fit$par[, 2]) 121s 121s > P.75 <- mu + 0.674 * sigma 121s 121s > plot(density(P.75), main = "Posterior Density of Upper Quartile") 121s > 121s 121s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 121s Copyright (C) 2024 The R Foundation for Statistical Computing 121s Platform: aarch64-unknown-linux-gnu (64-bit) 121s 121s R is free software and comes with ABSOLUTELY NO WARRANTY. 121s You are welcome to redistribute it under certain conditions. 121s Type 'license()' or 'licence()' for distribution details. 121s 121s R is a collaborative project with many contributors. 121s Type 'contributors()' for more information and 121s 'citation()' on how to cite R or R packages in publications. 121s 121s Type 'demo()' for some demos, 'help()' for on-line help, or 121s 'help.start()' for an HTML browser interface to help. 121s Type 'q()' to quit R. 121s 122s > Stangle("MultilevelModeling.Rnw") 122s Writing to file MultilevelModeling.R 122s > source("MultilevelModeling.R", echo=TRUE) 122s 122s > d <- data.frame(Name = c("Clemente", "Robinson", "Howard", 122s + "Johnstone", "Berry", "Spencer", "Kessinger", "Alvarado", 122s + "Santo", "Swaboda ..." ... [TRUNCATED] 122s 122s > library(LearnBayes) 122s 122s > laplace.fit <- laplace(betabinexch, c(0, 0), d[, c("Hits", 122s + "At.Bats")]) 122s 122s > laplace.fit 122s $mode 122s [1] -1.013462 4.436169 122s 122s $var 122s [,1] [,2] 122s [1,] 0.009556755 -0.005509578 122s [2,] -0.005509578 0.702918212 122s 122s $int 122s [1] -474.3837 122s 122s $converge 122s [1] TRUE 122s 122s 122s > mcmc.fit <- rwmetrop(betabinexch, list(var = laplace.fit$var, 122s + scale = 2), c(0, 0), 5000, d[, c("Hits", "At.Bats")]) 122s 122s > mycontour(betabinexch, c(-1.5, -0.5, 2, 12), d[, c("Hits", 122s + "At.Bats")], xlab = "Logit ETA", ylab = "Log K") 122s 122s > with(mcmc.fit, points(par)) 122s 122s > eta <- with(mcmc.fit, exp(par[, 1])/(1 + exp(par[, 122s + 1]))) 122s 122s > K <- exp(mcmc.fit$par[, 2]) 122s 122s > p.estimate <- function(j, eta, K) { 122s + yj <- d[j, "Hits"] 122s + nj <- d[j, "At.Bats"] 122s + p.sim <- rbeta(5000, yj + K * eta, nj - yj + K * (1 - .... [TRUNCATED] 122s 122s > E <- t(sapply(1:18, p.estimate, eta, K)) 122s 122s > rownames(E) <- d[, "Name"] 122s 122s > round(E, 3) 122s 5% 50% 95% 122s Clemente 0.242 0.304 0.399 122s Robinson 0.239 0.296 0.385 122s Howard 0.233 0.290 0.374 122s Johnstone 0.227 0.283 0.364 122s Berry 0.221 0.279 0.353 122s Spencer 0.219 0.277 0.355 122s Kessinger 0.213 0.272 0.346 122s Alvarado 0.206 0.266 0.335 122s Santo 0.194 0.260 0.325 122s Swaboda 0.195 0.259 0.324 122s Petrocelli 0.189 0.253 0.317 122s Rodriguez 0.188 0.254 0.313 122s Scott 0.187 0.253 0.317 122s Unser 0.187 0.254 0.316 122s Williams 0.187 0.253 0.316 122s Campaneris 0.178 0.248 0.310 122s Munson 0.169 0.242 0.300 122s Alvis 0.156 0.235 0.295 122s 122s > plot(d$Hits/45, E[, 2], pch = 19, ylim = c(0.15, 0.4), 122s + xlab = "Observed AVG", ylab = "True Probability", main = "90 Percent Probability Inter ..." ... [TRUNCATED] 122s 122s > for (j in 1:18) lines(d$Hits[j]/45 * c(1, 1), E[j, 122s + c(1, 3)]) 122s 122s > abline(a = 0, b = 1, col = "blue") 122s 122s > abline(h = mean(d$Hits)/45, col = "red") 122s 122s > legend("topleft", legend = c("Individual", "Combined"), 122s + lty = 1, col = c("blue", "red")) 122s > 122s autopkgtest [19:02:13]: test run-unit-test: -----------------------] 123s run-unit-test PASS 123s autopkgtest [19:02:14]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 123s autopkgtest [19:02:14]: @@@@@@@@@@@@@@@@@@@@ summary 123s run-unit-test PASS 134s Creating nova instance adt-noble-arm64-r-cran-learnbayes-20240316-190011-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...