0s autopkgtest [18:44:25]: starting date and time: 2024-03-16 18:44:25+0000 0s autopkgtest [18:44:25]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:44:25]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zz8js6to/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-gridbase --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-10.secgroup --name adt-noble-arm64-r-cran-gridbase-20240316-184425-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 80s autopkgtest [18:45:45]: testbed dpkg architecture: arm64 80s autopkgtest [18:45:45]: testbed apt version: 2.7.12 80s autopkgtest [18:45:45]: @@@@@@@@@@@@@@@@@@@@ test bed setup 80s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 81s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 81s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 81s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 81s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 82s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 82s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 82s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 82s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 82s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB] 82s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 82s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 82s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 84s Fetched 9084 kB in 2s (4086 kB/s) 84s Reading package lists... 87s Reading package lists... 88s Building dependency tree... 88s Reading state information... 89s Calculating upgrade... 89s The following packages will be REMOVED: 89s libglib2.0-0 libssl3 89s The following NEW packages will be installed: 89s libglib2.0-0t64 libssl3t64 xdg-user-dirs 89s The following packages have been kept back: 89s curl 89s The following packages will be upgraded: 89s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 89s ubuntu-minimal ubuntu-standard 89s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 89s Need to get 4613 kB of archives. 89s After this operation, 211 kB of additional disk space will be used. 89s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 90s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 90s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 90s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 90s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 90s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 90s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 90s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 90s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 90s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 91s Fetched 4613 kB in 1s (5996 kB/s) 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 91s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 91s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 91s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 91s udisks2 depends on libglib2.0-0 (>= 2.77.0). 91s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 91s python3-gi depends on libglib2.0-0 (>= 2.77.0). 91s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 91s netplan.io depends on libglib2.0-0 (>= 2.70.0). 91s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 91s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 91s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 91s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 91s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 91s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 91s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 91s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 91s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 91s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 91s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 91s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 91s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 91s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 91s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 91s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 91s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 91s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 91s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 91s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 91s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 91s fwupd depends on libglib2.0-0 (>= 2.79.0). 91s bolt depends on libglib2.0-0 (>= 2.56.0). 91s 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 91s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 91s Selecting previously unselected package libglib2.0-0t64:arm64. 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 91s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 91s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 91s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 91s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 92s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 92s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 92s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 92s wget depends on libssl3 (>= 3.0.0). 92s u-boot-tools depends on libssl3 (>= 3.0.0). 92s tnftp depends on libssl3 (>= 3.0.0). 92s tcpdump depends on libssl3 (>= 3.0.0). 92s systemd-resolved depends on libssl3 (>= 3.0.0). 92s systemd depends on libssl3 (>= 3.0.0). 92s sudo depends on libssl3 (>= 3.0.0). 92s sbsigntool depends on libssl3 (>= 3.0.0). 92s rsync depends on libssl3 (>= 3.0.0). 92s python3-cryptography depends on libssl3 (>= 3.0.0). 92s openssh-server depends on libssl3 (>= 3.0.10). 92s openssh-client depends on libssl3 (>= 3.0.10). 92s mtd-utils depends on libssl3 (>= 3.0.0). 92s mokutil depends on libssl3 (>= 3.0.0). 92s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 92s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 92s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 92s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 92s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 92s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 92s libnvme1 depends on libssl3 (>= 3.0.0). 92s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 92s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 92s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 92s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 92s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 92s kmod depends on libssl3 (>= 3.0.0). 92s dhcpcd-base depends on libssl3 (>= 3.0.0). 92s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 92s 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 92s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 92s Selecting previously unselected package libssl3t64:arm64. 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 92s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 92s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 92s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 92s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 92s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 92s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 92s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 92s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 93s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 93s Unpacking ubuntu-minimal (1.536) over (1.535) ... 93s Selecting previously unselected package xdg-user-dirs. 93s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 93s Unpacking xdg-user-dirs (0.18-1) ... 93s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 93s Unpacking ubuntu-standard (1.536) over (1.535) ... 93s Setting up ubuntu-minimal (1.536) ... 93s Setting up xdg-user-dirs (0.18-1) ... 93s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 93s Setting up libtirpc-common (1.3.4+ds-1.1) ... 93s Setting up ubuntu-standard (1.536) ... 93s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 93s No schema files found: doing nothing. 93s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 93s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 93s Setting up openssl (3.0.13-0ubuntu1) ... 93s Setting up readline-common (8.2-3.1) ... 93s Processing triggers for man-db (2.12.0-3) ... 94s Processing triggers for install-info (7.1-3) ... 94s Processing triggers for libc-bin (2.39-0ubuntu2) ... 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 96s sh: Attempting to set up Debian/Ubuntu apt sources automatically 96s sh: Distribution appears to be Ubuntu 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s eatmydata is already the newest version (131-1). 98s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 99s dbus is already the newest version (1.14.10-4ubuntu1). 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 100s rng-tools-debian is already the newest version (2.4). 100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 101s The following packages will be REMOVED: 101s cloud-init* python3-configobj* python3-debconf* 101s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 101s After this operation, 3252 kB disk space will be freed. 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 101s Removing cloud-init (24.1.1-0ubuntu1) ... 102s Removing python3-configobj (5.0.8-3) ... 102s Removing python3-debconf (1.5.86) ... 102s Processing triggers for man-db (2.12.0-3) ... 102s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74385 files and directories currently installed.) 102s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 103s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 103s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 103s invoke-rc.d: policy-rc.d denied execution of try-restart. 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 104s linux-generic is already the newest version (6.8.0-11.11+1). 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 104s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 105s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 107s Reading package lists... 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 108s Calculating upgrade... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s autopkgtest [18:46:15]: rebooting testbed after setup commands that affected boot 334s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 341s autopkgtest [18:50:06]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 343s autopkgtest [18:50:08]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gridbase 346s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-gridbase 0.4-7-5build1 (dsc) [2093 B] 346s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-gridbase 0.4-7-5build1 (tar) [153 kB] 346s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-gridbase 0.4-7-5build1 (diff) [2500 B] 346s gpgv: Signature made Sat May 30 10:04:42 2020 UTC 346s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 346s gpgv: Can't check signature: No public key 346s dpkg-source: warning: cannot verify inline signature for ./r-cran-gridbase_0.4-7-5build1.dsc: no acceptable signature found 346s autopkgtest [18:50:11]: testing package r-cran-gridbase version 0.4-7-5build1 347s autopkgtest [18:50:12]: build not needed 347s autopkgtest [18:50:12]: test run-unit-test: preparing testbed 349s Reading package lists... 349s Building dependency tree... 349s Reading state information... 349s Starting pkgProblemResolver with broken count: 0 349s Starting 2 pkgProblemResolver with broken count: 0 349s Done 350s The following additional packages will be installed: 350s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 350s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 350s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 350s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 350s libpaper-utils libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 350s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 350s libxft2 libxrender1 libxss1 libxt6 r-base-core r-cran-gridbase 350s r-cran-lattice unzip x11-common xdg-utils zip 350s Suggested packages: 350s tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 350s Recommended packages: 350s r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl 350s libx11-protocol-perl x11-utils x11-xserver-utils 350s The following NEW packages will be installed: 350s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 350s fonts-dejavu-mono libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1 350s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 350s libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 350s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 350s libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 350s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 350s r-base-core r-cran-gridbase r-cran-lattice unzip x11-common xdg-utils zip 350s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. 350s Need to get 38.1 MB/38.1 MB of archives. 350s After this operation, 77.2 MB of additional disk space will be used. 350s Get:1 /tmp/autopkgtest.94C2Ho/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 350s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 350s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 351s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 351s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 351s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 351s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 351s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 351s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 351s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 351s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 351s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 351s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 351s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 351s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 351s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 351s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 351s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 351s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 351s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 351s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 351s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 351s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 351s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 351s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 351s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 351s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 351s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 351s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 351s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 351s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 351s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 351s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 351s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 351s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 351s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 351s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 351s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 351s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 351s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 351s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 351s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 351s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 351s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 351s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 352s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gridbase all 0.4-7-5build1 [163 kB] 352s Get:47 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 352s Preconfiguring packages ... 353s Fetched 38.1 MB in 2s (21.0 MB/s) 353s Selecting previously unselected package fonts-dejavu-mono. 353s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74330 files and directories currently installed.) 353s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 353s Unpacking fonts-dejavu-mono (2.37-8) ... 353s Selecting previously unselected package fonts-dejavu-core. 353s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 353s Unpacking fonts-dejavu-core (2.37-8) ... 353s Selecting previously unselected package fontconfig-config. 353s Preparing to unpack .../02-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 353s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 353s Selecting previously unselected package libfontconfig1:arm64. 353s Preparing to unpack .../03-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 353s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 353s Selecting previously unselected package fontconfig. 353s Preparing to unpack .../04-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 353s Unpacking fontconfig (2.15.0-1ubuntu1) ... 353s Selecting previously unselected package libblas3:arm64. 353s Preparing to unpack .../05-libblas3_3.12.0-3_arm64.deb ... 353s Unpacking libblas3:arm64 (3.12.0-3) ... 353s Selecting previously unselected package libpixman-1-0:arm64. 353s Preparing to unpack .../06-libpixman-1-0_0.42.2-1_arm64.deb ... 353s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 353s Selecting previously unselected package libxcb-render0:arm64. 353s Preparing to unpack .../07-libxcb-render0_1.15-1_arm64.deb ... 353s Unpacking libxcb-render0:arm64 (1.15-1) ... 353s Selecting previously unselected package libxcb-shm0:arm64. 353s Preparing to unpack .../08-libxcb-shm0_1.15-1_arm64.deb ... 353s Unpacking libxcb-shm0:arm64 (1.15-1) ... 353s Selecting previously unselected package libxrender1:arm64. 354s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 354s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 354s Selecting previously unselected package libcairo2:arm64. 354s Preparing to unpack .../10-libcairo2_1.18.0-1_arm64.deb ... 354s Unpacking libcairo2:arm64 (1.18.0-1) ... 354s Selecting previously unselected package libdatrie1:arm64. 354s Preparing to unpack .../11-libdatrie1_0.2.13-3_arm64.deb ... 354s Unpacking libdatrie1:arm64 (0.2.13-3) ... 354s Selecting previously unselected package libdeflate0:arm64. 354s Preparing to unpack .../12-libdeflate0_1.19-1_arm64.deb ... 354s Unpacking libdeflate0:arm64 (1.19-1) ... 354s Selecting previously unselected package libgfortran5:arm64. 354s Preparing to unpack .../13-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 354s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 354s Selecting previously unselected package libgomp1:arm64. 354s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 354s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 354s Selecting previously unselected package libgraphite2-3:arm64. 354s Preparing to unpack .../15-libgraphite2-3_1.3.14-2_arm64.deb ... 354s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 354s Selecting previously unselected package libharfbuzz0b:arm64. 354s Preparing to unpack .../16-libharfbuzz0b_8.3.0-2_arm64.deb ... 354s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 354s Selecting previously unselected package x11-common. 354s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu2_all.deb ... 354s Unpacking x11-common (1:7.7+23ubuntu2) ... 354s Selecting previously unselected package libice6:arm64. 354s Preparing to unpack .../18-libice6_2%3a1.0.10-1build2_arm64.deb ... 354s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 354s Selecting previously unselected package libjpeg-turbo8:arm64. 354s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 354s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 354s Selecting previously unselected package libjpeg8:arm64. 354s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ... 354s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 354s Selecting previously unselected package liblapack3:arm64. 354s Preparing to unpack .../21-liblapack3_3.12.0-3_arm64.deb ... 354s Unpacking liblapack3:arm64 (3.12.0-3) ... 354s Selecting previously unselected package liblerc4:arm64. 354s Preparing to unpack .../22-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 354s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 354s Selecting previously unselected package libthai-data. 354s Preparing to unpack .../23-libthai-data_0.1.29-2_all.deb ... 354s Unpacking libthai-data (0.1.29-2) ... 354s Selecting previously unselected package libthai0:arm64. 354s Preparing to unpack .../24-libthai0_0.1.29-2_arm64.deb ... 354s Unpacking libthai0:arm64 (0.1.29-2) ... 354s Selecting previously unselected package libpango-1.0-0:arm64. 354s Preparing to unpack .../25-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 354s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 354s Selecting previously unselected package libpangoft2-1.0-0:arm64. 354s Preparing to unpack .../26-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 354s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 354s Selecting previously unselected package libpangocairo-1.0-0:arm64. 354s Preparing to unpack .../27-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 354s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 354s Selecting previously unselected package libpaper1:arm64. 354s Preparing to unpack .../28-libpaper1_1.1.29_arm64.deb ... 354s Unpacking libpaper1:arm64 (1.1.29) ... 354s Selecting previously unselected package libpaper-utils. 355s Preparing to unpack .../29-libpaper-utils_1.1.29_arm64.deb ... 355s Unpacking libpaper-utils (1.1.29) ... 355s Selecting previously unselected package libsharpyuv0:arm64. 355s Preparing to unpack .../30-libsharpyuv0_1.3.2-0.4_arm64.deb ... 355s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 355s Selecting previously unselected package libsm6:arm64. 355s Preparing to unpack .../31-libsm6_2%3a1.2.3-1build2_arm64.deb ... 355s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 355s Selecting previously unselected package libtcl8.6:arm64. 355s Preparing to unpack .../32-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 355s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 355s Selecting previously unselected package libjbig0:arm64. 355s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 355s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 355s Selecting previously unselected package libwebp7:arm64. 355s Preparing to unpack .../34-libwebp7_1.3.2-0.4_arm64.deb ... 355s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 355s Selecting previously unselected package libtiff6:arm64. 355s Preparing to unpack .../35-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 355s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 355s Selecting previously unselected package libxft2:arm64. 355s Preparing to unpack .../36-libxft2_2.3.6-1_arm64.deb ... 355s Unpacking libxft2:arm64 (2.3.6-1) ... 355s Selecting previously unselected package libxss1:arm64. 355s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build2_arm64.deb ... 355s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 355s Selecting previously unselected package libtk8.6:arm64. 356s Preparing to unpack .../38-libtk8.6_8.6.13-2_arm64.deb ... 356s Unpacking libtk8.6:arm64 (8.6.13-2) ... 356s Selecting previously unselected package libxt6:arm64. 356s Preparing to unpack .../39-libxt6_1%3a1.2.1-1.1_arm64.deb ... 356s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 356s Selecting previously unselected package zip. 356s Preparing to unpack .../40-zip_3.0-13_arm64.deb ... 356s Unpacking zip (3.0-13) ... 356s Selecting previously unselected package unzip. 356s Preparing to unpack .../41-unzip_6.0-28ubuntu3_arm64.deb ... 356s Unpacking unzip (6.0-28ubuntu3) ... 356s Selecting previously unselected package xdg-utils. 356s Preparing to unpack .../42-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 356s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 356s Selecting previously unselected package r-base-core. 357s Preparing to unpack .../43-r-base-core_4.3.2-1build1_arm64.deb ... 357s Unpacking r-base-core (4.3.2-1build1) ... 357s Selecting previously unselected package r-cran-gridbase. 357s Preparing to unpack .../44-r-cran-gridbase_0.4-7-5build1_all.deb ... 357s Unpacking r-cran-gridbase (0.4-7-5build1) ... 357s Selecting previously unselected package r-cran-lattice. 357s Preparing to unpack .../45-r-cran-lattice_0.22-5-1_arm64.deb ... 357s Unpacking r-cran-lattice (0.22-5-1) ... 357s Selecting previously unselected package autopkgtest-satdep. 357s Preparing to unpack .../46-1-autopkgtest-satdep.deb ... 357s Unpacking autopkgtest-satdep (0) ... 357s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 357s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 357s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 357s Setting up libpaper1:arm64 (1.1.29) ... 358s 358s Creating config file /etc/papersize with new version 358s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 358s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 358s Setting up libdatrie1:arm64 (0.2.13-3) ... 358s Setting up libxcb-render0:arm64 (1.15-1) ... 358s Setting up unzip (6.0-28ubuntu3) ... 358s Setting up x11-common (1:7.7+23ubuntu2) ... 359s Setting up libdeflate0:arm64 (1.19-1) ... 359s Setting up libxcb-shm0:arm64 (1.15-1) ... 359s Setting up libpaper-utils (1.1.29) ... 359s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 359s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 359s Setting up zip (3.0-13) ... 359s Setting up libblas3:arm64 (3.12.0-3) ... 359s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 359s Setting up fonts-dejavu-mono (2.37-8) ... 359s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 359s Setting up fonts-dejavu-core (2.37-8) ... 359s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 359s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 359s Setting up libwebp7:arm64 (1.3.2-0.4) ... 359s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 359s Setting up libthai-data (0.1.29-2) ... 359s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 359s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 359s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 359s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 359s Setting up libice6:arm64 (2:1.0.10-1build2) ... 359s Setting up liblapack3:arm64 (3.12.0-3) ... 359s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 359s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 359s Setting up libthai0:arm64 (0.1.29-2) ... 359s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 359s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 359s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 359s Setting up fontconfig (2.15.0-1ubuntu1) ... 361s Regenerating fonts cache... done. 361s Setting up libxft2:arm64 (2.3.6-1) ... 361s Setting up libtk8.6:arm64 (8.6.13-2) ... 361s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 361s Setting up libcairo2:arm64 (1.18.0-1) ... 361s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 361s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 361s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 361s Setting up r-base-core (4.3.2-1build1) ... 362s 362s Creating config file /etc/R/Renviron with new version 362s Setting up r-cran-lattice (0.22-5-1) ... 362s Setting up r-cran-gridbase (0.4-7-5build1) ... 362s Setting up autopkgtest-satdep (0) ... 362s Processing triggers for man-db (2.12.0-3) ... 363s Processing triggers for install-info (7.1-3) ... 363s Processing triggers for libc-bin (2.39-0ubuntu2) ... 368s (Reading database ... 76431 files and directories currently installed.) 368s Removing autopkgtest-satdep (0) ... 368s autopkgtest [18:50:33]: test run-unit-test: [----------------------- 369s 369s R version 4.3.2 (2023-10-31) -- "Eye Holes" 369s Copyright (C) 2023 The R Foundation for Statistical Computing 369s Platform: aarch64-unknown-linux-gnu (64-bit) 369s 369s R is free software and comes with ABSOLUTELY NO WARRANTY. 369s You are welcome to redistribute it under certain conditions. 369s Type 'license()' or 'licence()' for distribution details. 369s 369s R is a collaborative project with many contributors. 369s Type 'contributors()' for more information and 369s 'citation()' on how to cite R or R packages in publications. 369s 369s Type 'demo()' for some demos, 'help()' for on-line help, or 369s 'help.start()' for an HTML browser interface to help. 369s Type 'q()' to quit R. 369s 369s > Stangle("gridBase.Rnw") 369s Writing to file gridBase.R 369s > source("gridBase.R", echo=TRUE) 369s 369s > library(grid) 369s 369s > library(gridBase) 369s 369s > midpts <- barplot(1:10, axes = FALSE) 369s 369s > axis(2) 369s 369s > axis(1, at = midpts, labels = FALSE) 369s 369s > vps <- baseViewports() 370s 370s > pushViewport(vps$inner, vps$figure, vps$plot) 370s 370s > grid.text(c("one", "two", "three", "four", "five", 370s + "six", "seven", "eight", "nine", "ten"), x = unit(midpts, 370s + "native"), y = unit(-1, " ..." ... [TRUNCATED] 370s 370s > popViewport(3) 370s 370s > novelsym <- function(speed, temp, width = unit(3, 370s + "mm"), length = unit(0.5, "inches")) { 370s + grid.rect(height = length, y = 0.5, just = "to ..." ... [TRUNCATED] 370s 370s > chinasea <- read.table(system.file("doc", "chinasea.txt", 370s + package = "gridBase"), header = TRUE) 370s 370s > plot(chinasea$lat, chinasea$long, type = "n", xlab = "latitude", 370s + ylab = "longitude", main = "China Sea Wind Speed/Direction and Temperature") 370s 370s > speed <- 0.8 * chinasea$speed/14 + 0.2 370s 370s > temp <- chinasea$temp/40 370s 370s > vps <- baseViewports() 370s 370s > pushViewport(vps$inner, vps$figure, vps$plot) 370s 370s > for (i in 1:25) { 370s + pushViewport(viewport(x = unit(chinasea$lat[i], "native"), 370s + y = unit(chinasea$long[i], "native"), angle = chinasea .... [TRUNCATED] 370s 370s > popViewport(3) 370s 370s > data(USArrests) 370s 370s > hc <- hclust(dist(USArrests), "ave") 370s 370s > dend1 <- as.dendrogram(hc) 370s 370s > dend2 <- cut(dend1, h = 70) 370s 370s > x <- 1:4 370s 370s > y <- 1:4 370s 370s > height <- factor(round(unlist(lapply(dend2$lower, 370s + attr, "height")))) 370s 370s > space <- max(unit(rep(1, 50), "strwidth", as.list(rownames(USArrests)))) 370s 370s > dendpanel <- function(x, y, subscripts, ...) { 370s + pushViewport(viewport(y = space, width = 0.9, height = unit(0.9, 370s + "npc") - space, jus .... [TRUNCATED] 370s 370s > library(lattice) 370s 370s > plot.new() 370s 370s > print(xyplot(y ~ x | height, subscripts = TRUE, xlab = "", 370s + ylab = "", strip = function(...) { 370s + strip.default(style = 4, ...) 370s + } .... [TRUNCATED] 370s 370s > counts <- c(18, 17, 15, 20, 10, 20, 25, 13, 12) 370s 370s > outcome <- gl(3, 1, 9) 370s 370s > treatment <- gl(3, 3) 370s 370s > oldpar <- par(no.readonly = TRUE) 370s 370s > pushViewport(viewport(layout = grid.layout(1, 3, widths = unit(rep(1, 370s + 3), c("null", "cm", "null"))))) 370s 370s > pushViewport(viewport(layout.pos.col = 1)) 370s 370s > library(lattice) 370s 370s > bwplot <- bwplot(counts ~ outcome | treatment) 370s 370s > print(bwplot, newpage = FALSE) 370s 370s > popViewport() 370s 370s > pushViewport(viewport(layout.pos.col = 3)) 370s 370s > glm.D93 <- glm(counts ~ outcome + treatment, family = poisson()) 370s 370s > par(omi = gridOMI(), mfrow = c(2, 2), new = TRUE) 370s 370s > par(cex = 0.5, mar = c(5, 4, 1, 2)) 370s 370s > par(mfg = c(1, 1)) 370s 370s > plot(glm.D93, caption = "", ask = FALSE) 370s 370s > popViewport(2) 370s 370s > par(oldpar) 370s 370s > x <- c(0.88, 1, 0.67, 0.34) 370s 370s > y <- c(0.87, 0.43, 0.04, 0.94) 370s 370s > z <- matrix(runif(4 * 2), ncol = 2) 370s 370s > oldpar <- par(no.readonly = TRUE) 370s 370s > maxpiesize <- unit(1, "inches") 370s 370s > totals <- apply(z, 1, sum) 370s 370s > sizemult <- totals/max(totals) 370s 370s > plot(x, y, xlim = c(-0.2, 1.2), ylim = c(-0.2, 1.2), 370s + type = "n") 370s 370s > vps <- baseViewports() 370s 370s > pushViewport(vps$inner, vps$figure, vps$plot) 370s 370s > grid.segments(x0 = unit(c(rep(0, 4), x), rep(c("npc", 370s + "native"), each = 4)), x1 = unit(c(x, x), rep("native", 8)), 370s + y0 = unit(c(y, rep( .... [TRUNCATED] 370s 370s > for (i in 1:4) { 370s + pushViewport(viewport(x = unit(x[i], "native"), y = unit(y[i], 370s + "native"), width = sizemult[i] * maxpiesize, height .... [TRUNCATED] 370s 370s > popViewport(3) 370s 370s > par(oldpar) 370s 370s > ctl <- c(4.17, 5.58, 5.18, 6.11, 4.5, 4.61, 5.17, 370s + 4.53, 5.33, 5.14) 370s 370s > trt <- c(4.81, 4.17, 4.41, 3.59, 5.87, 3.83, 6.03, 370s + 4.89, 4.32, 4.69) 370s 370s > group <- gl(2, 10, 20, labels = c("Ctl", "Trt")) 370s 370s > weight <- c(ctl, trt) 370s 370s > oldpar <- par(no.readonly = TRUE) 370s > 370s gridBase.Rnw passed 370s autopkgtest [18:50:35]: test run-unit-test: -----------------------] 371s run-unit-test PASS 371s autopkgtest [18:50:36]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 371s autopkgtest [18:50:36]: @@@@@@@@@@@@@@@@@@@@ summary 371s run-unit-test PASS 382s Creating nova instance adt-noble-arm64-r-cran-gridbase-20240316-184425-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...