0s autopkgtest [18:30:48]: starting date and time: 2024-03-16 18:30:48+0000 0s autopkgtest [18:30:48]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:30:48]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.w264iku8/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-fit.models --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-1.secgroup --name adt-noble-arm64-r-cran-fit.models-20240316-183048-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 188s autopkgtest [18:33:56]: testbed dpkg architecture: arm64 188s autopkgtest [18:33:56]: testbed apt version: 2.7.12 188s autopkgtest [18:33:56]: @@@@@@@@@@@@@@@@@@@@ test bed setup 189s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 189s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 189s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 189s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 190s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 190s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 190s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 190s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 190s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 190s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB] 190s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 190s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 190s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 192s Fetched 9084 kB in 2s (4479 kB/s) 192s Reading package lists... 195s Reading package lists... 195s Building dependency tree... 195s Reading state information... 196s Calculating upgrade... 196s The following packages will be REMOVED: 196s libglib2.0-0 libssl3 196s The following NEW packages will be installed: 196s libglib2.0-0t64 libssl3t64 xdg-user-dirs 196s The following packages have been kept back: 196s curl 196s The following packages will be upgraded: 196s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 196s ubuntu-minimal ubuntu-standard 197s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 197s Need to get 4613 kB of archives. 197s After this operation, 211 kB of additional disk space will be used. 197s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 197s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 197s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 197s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 197s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 197s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 197s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 197s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 197s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 197s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 198s Fetched 4613 kB in 1s (6568 kB/s) 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 198s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 198s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 198s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 198s udisks2 depends on libglib2.0-0 (>= 2.77.0). 198s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 198s python3-gi depends on libglib2.0-0 (>= 2.77.0). 198s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 198s netplan.io depends on libglib2.0-0 (>= 2.70.0). 198s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 198s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 198s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 198s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 198s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 198s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 198s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 198s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 198s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 198s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 198s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 198s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 198s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 198s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 198s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 198s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 198s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 198s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 198s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 198s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 198s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 198s fwupd depends on libglib2.0-0 (>= 2.79.0). 198s bolt depends on libglib2.0-0 (>= 2.56.0). 198s 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 198s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 198s Selecting previously unselected package libglib2.0-0t64:arm64. 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 198s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 198s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 198s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 198s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 198s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 198s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 198s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 198s wget depends on libssl3 (>= 3.0.0). 198s u-boot-tools depends on libssl3 (>= 3.0.0). 198s tnftp depends on libssl3 (>= 3.0.0). 198s tcpdump depends on libssl3 (>= 3.0.0). 198s systemd-resolved depends on libssl3 (>= 3.0.0). 198s systemd depends on libssl3 (>= 3.0.0). 198s sudo depends on libssl3 (>= 3.0.0). 198s sbsigntool depends on libssl3 (>= 3.0.0). 198s rsync depends on libssl3 (>= 3.0.0). 198s python3-cryptography depends on libssl3 (>= 3.0.0). 198s openssh-server depends on libssl3 (>= 3.0.10). 198s openssh-client depends on libssl3 (>= 3.0.10). 198s mtd-utils depends on libssl3 (>= 3.0.0). 198s mokutil depends on libssl3 (>= 3.0.0). 198s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 198s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 198s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 198s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 198s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 198s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 198s libnvme1 depends on libssl3 (>= 3.0.0). 198s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 198s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 198s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 198s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 198s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 198s kmod depends on libssl3 (>= 3.0.0). 198s dhcpcd-base depends on libssl3 (>= 3.0.0). 198s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 198s 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 199s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 199s Selecting previously unselected package libssl3t64:arm64. 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 199s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 199s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 199s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 199s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 199s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 199s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 199s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 199s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 199s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 199s Unpacking ubuntu-minimal (1.536) over (1.535) ... 199s Selecting previously unselected package xdg-user-dirs. 199s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 199s Unpacking xdg-user-dirs (0.18-1) ... 199s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 199s Unpacking ubuntu-standard (1.536) over (1.535) ... 199s Setting up ubuntu-minimal (1.536) ... 199s Setting up xdg-user-dirs (0.18-1) ... 199s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 199s Setting up libtirpc-common (1.3.4+ds-1.1) ... 199s Setting up ubuntu-standard (1.536) ... 199s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 199s No schema files found: doing nothing. 199s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 199s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 199s Setting up openssl (3.0.13-0ubuntu1) ... 199s Setting up readline-common (8.2-3.1) ... 199s Processing triggers for man-db (2.12.0-3) ... 200s Processing triggers for install-info (7.1-3) ... 200s Processing triggers for libc-bin (2.39-0ubuntu2) ... 200s Reading package lists... 201s Building dependency tree... 201s Reading state information... 201s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 202s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 202s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 202s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 202s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 203s Reading package lists... 203s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s Calculating upgrade... 205s The following packages have been kept back: 205s curl 205s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 205s Reading package lists... 205s Building dependency tree... 205s Reading state information... 206s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 208s autopkgtest [18:34:16]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 208s autopkgtest [18:34:16]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-fit.models 210s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-fit.models 0.64-1 (dsc) [2144 B] 210s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-fit.models 0.64-1 (tar) [32.5 kB] 210s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-fit.models 0.64-1 (diff) [2324 B] 210s gpgv: Signature made Wed Sep 2 09:42:33 2020 UTC 210s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 210s gpgv: issuer "tille@debian.org" 210s gpgv: Can't check signature: No public key 210s dpkg-source: warning: cannot verify inline signature for ./r-cran-fit.models_0.64-1.dsc: no acceptable signature found 211s autopkgtest [18:34:19]: testing package r-cran-fit.models version 0.64-1 211s autopkgtest [18:34:19]: build not needed 212s autopkgtest [18:34:20]: test run-unit-test: preparing testbed 213s Reading package lists... 213s Building dependency tree... 213s Reading state information... 214s Starting pkgProblemResolver with broken count: 0 214s Starting 2 pkgProblemResolver with broken count: 0 214s Done 214s The following additional packages will be installed: 214s curl fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 214s libblas3 libcairo2 libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 214s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 214s libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 214s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 214s libpng16-16t64 libpsl5t64 libreadline8t64 libsharpyuv0 libsm6 libtcl8.6 214s libthai-data libthai0 libtiff6 libtirpc3t64 libtk8.6 libwebp7 libxcb-render0 214s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core 214s r-cran-fit.models r-cran-lattice r-cran-mass unzip x11-common xdg-utils zip 214s Suggested packages: 214s tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 214s Recommended packages: 214s r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl 214s libx11-protocol-perl x11-utils x11-xserver-utils 214s The following packages will be REMOVED: 214s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 214s The following NEW packages will be installed: 214s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 214s fonts-dejavu-mono libblas3 libcairo2 libcurl4t64 libdatrie1 libdeflate0 214s libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 214s libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 214s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 214s libpng16-16t64 libpsl5t64 libreadline8t64 libsharpyuv0 libsm6 libtcl8.6 214s libthai-data libthai0 libtiff6 libtirpc3t64 libtk8.6 libwebp7 libxcb-render0 214s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core 214s r-cran-fit.models r-cran-lattice r-cran-mass unzip x11-common xdg-utils zip 214s The following packages will be upgraded: 214s curl 214s 1 upgraded, 53 newly installed, 5 to remove and 0 not upgraded. 214s Need to get 40.3 MB/40.3 MB of archives. 214s After this operation, 78.7 MB of additional disk space will be used. 214s Get:1 /tmp/autopkgtest.macJhp/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 214s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 215s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 215s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 215s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 215s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 215s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 215s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 215s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 215s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 215s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 215s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 215s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 215s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 215s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 215s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 215s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 215s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 215s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 215s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 215s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 215s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 215s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 215s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 215s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 215s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 215s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 215s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 215s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 215s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 215s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 215s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 215s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 215s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 215s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 215s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 215s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 215s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 215s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 215s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 215s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 215s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 215s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 215s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 215s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 215s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 215s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 216s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 216s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 216s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 216s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 216s Get:52 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 216s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fit.models all 0.64-1 [144 kB] 216s Get:54 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 218s Preconfiguring packages ... 219s Fetched 40.3 MB in 2s (21.4 MB/s) 219s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 219s wget depends on libpsl5 (>= 0.16.0). 219s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 219s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 219s 219s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 219s Removing libpsl5:arm64 (0.21.2-1build1) ... 220s Selecting previously unselected package libpsl5t64:arm64. 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 220s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 220s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 220s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 220s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 221s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 221s Selecting previously unselected package libcurl4t64:arm64. 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 221s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 221s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 222s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 222s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 222s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 222s 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 222s Removing libpng16-16:arm64 (1.6.43-1) ... 222s Selecting previously unselected package libpng16-16t64:arm64. 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 222s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 222s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 222s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 222s parted depends on libreadline8 (>= 6.0). 222s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 222s gpgsm depends on libreadline8 (>= 6.0). 222s gpgconf depends on libreadline8 (>= 6.0). 222s gpg depends on libreadline8 (>= 6.0). 222s gawk depends on libreadline8 (>= 6.0). 222s fdisk depends on libreadline8 (>= 6.0). 222s 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 222s Removing libreadline8:arm64 (8.2-3) ... 223s Selecting previously unselected package libreadline8t64:arm64. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 223s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 223s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 223s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 223s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 223s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 223s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 223s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 223s lsof depends on libtirpc3 (>= 1.0.2). 223s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 223s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 223s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 223s iproute2 depends on libtirpc3 (>= 1.0.2). 223s 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 223s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 223s Selecting previously unselected package libtirpc3t64:arm64. 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 224s Preparing to unpack .../00-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 224s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 224s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 224s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 224s Selecting previously unselected package fonts-dejavu-mono. 224s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 224s Unpacking fonts-dejavu-mono (2.37-8) ... 224s Selecting previously unselected package fonts-dejavu-core. 224s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 225s Unpacking fonts-dejavu-core (2.37-8) ... 225s Selecting previously unselected package fontconfig-config. 225s Preparing to unpack .../03-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 226s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 226s Selecting previously unselected package libfontconfig1:arm64. 226s Preparing to unpack .../04-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 226s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 226s Selecting previously unselected package fontconfig. 227s Preparing to unpack .../05-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 227s Unpacking fontconfig (2.15.0-1ubuntu1) ... 227s Selecting previously unselected package libblas3:arm64. 227s Preparing to unpack .../06-libblas3_3.12.0-3_arm64.deb ... 227s Unpacking libblas3:arm64 (3.12.0-3) ... 227s Selecting previously unselected package libpixman-1-0:arm64. 227s Preparing to unpack .../07-libpixman-1-0_0.42.2-1_arm64.deb ... 227s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 227s Selecting previously unselected package libxcb-render0:arm64. 227s Preparing to unpack .../08-libxcb-render0_1.15-1_arm64.deb ... 227s Unpacking libxcb-render0:arm64 (1.15-1) ... 227s Selecting previously unselected package libxcb-shm0:arm64. 228s Preparing to unpack .../09-libxcb-shm0_1.15-1_arm64.deb ... 228s Unpacking libxcb-shm0:arm64 (1.15-1) ... 228s Selecting previously unselected package libxrender1:arm64. 228s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 229s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 229s Selecting previously unselected package libcairo2:arm64. 229s Preparing to unpack .../11-libcairo2_1.18.0-1_arm64.deb ... 229s Unpacking libcairo2:arm64 (1.18.0-1) ... 229s Selecting previously unselected package libdatrie1:arm64. 229s Preparing to unpack .../12-libdatrie1_0.2.13-3_arm64.deb ... 229s Unpacking libdatrie1:arm64 (0.2.13-3) ... 230s Selecting previously unselected package libdeflate0:arm64. 230s Preparing to unpack .../13-libdeflate0_1.19-1_arm64.deb ... 230s Unpacking libdeflate0:arm64 (1.19-1) ... 230s Selecting previously unselected package libgfortran5:arm64. 230s Preparing to unpack .../14-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 230s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 230s Selecting previously unselected package libgomp1:arm64. 230s Preparing to unpack .../15-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 230s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 231s Selecting previously unselected package libgraphite2-3:arm64. 231s Preparing to unpack .../16-libgraphite2-3_1.3.14-2_arm64.deb ... 231s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 231s Selecting previously unselected package libharfbuzz0b:arm64. 231s Preparing to unpack .../17-libharfbuzz0b_8.3.0-2_arm64.deb ... 231s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 231s Selecting previously unselected package x11-common. 232s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu2_all.deb ... 232s Unpacking x11-common (1:7.7+23ubuntu2) ... 232s Selecting previously unselected package libice6:arm64. 232s Preparing to unpack .../19-libice6_2%3a1.0.10-1build2_arm64.deb ... 232s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 232s Selecting previously unselected package libjpeg-turbo8:arm64. 233s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 233s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 233s Selecting previously unselected package libjpeg8:arm64. 233s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_arm64.deb ... 233s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 233s Selecting previously unselected package liblapack3:arm64. 233s Preparing to unpack .../22-liblapack3_3.12.0-3_arm64.deb ... 233s Unpacking liblapack3:arm64 (3.12.0-3) ... 233s Selecting previously unselected package liblerc4:arm64. 234s Preparing to unpack .../23-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 234s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 234s Selecting previously unselected package libthai-data. 234s Preparing to unpack .../24-libthai-data_0.1.29-2_all.deb ... 234s Unpacking libthai-data (0.1.29-2) ... 234s Selecting previously unselected package libthai0:arm64. 234s Preparing to unpack .../25-libthai0_0.1.29-2_arm64.deb ... 234s Unpacking libthai0:arm64 (0.1.29-2) ... 234s Selecting previously unselected package libpango-1.0-0:arm64. 234s Preparing to unpack .../26-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 234s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 234s Selecting previously unselected package libpangoft2-1.0-0:arm64. 234s Preparing to unpack .../27-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 234s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 234s Selecting previously unselected package libpangocairo-1.0-0:arm64. 234s Preparing to unpack .../28-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 234s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 234s Selecting previously unselected package libpaper1:arm64. 234s Preparing to unpack .../29-libpaper1_1.1.29_arm64.deb ... 234s Unpacking libpaper1:arm64 (1.1.29) ... 234s Selecting previously unselected package libpaper-utils. 234s Preparing to unpack .../30-libpaper-utils_1.1.29_arm64.deb ... 234s Unpacking libpaper-utils (1.1.29) ... 235s Selecting previously unselected package libsharpyuv0:arm64. 235s Preparing to unpack .../31-libsharpyuv0_1.3.2-0.4_arm64.deb ... 235s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 235s Selecting previously unselected package libsm6:arm64. 235s Preparing to unpack .../32-libsm6_2%3a1.2.3-1build2_arm64.deb ... 235s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 235s Selecting previously unselected package libtcl8.6:arm64. 235s Preparing to unpack .../33-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 235s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 235s Selecting previously unselected package libjbig0:arm64. 235s Preparing to unpack .../34-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 235s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 235s Selecting previously unselected package libwebp7:arm64. 235s Preparing to unpack .../35-libwebp7_1.3.2-0.4_arm64.deb ... 235s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 235s Selecting previously unselected package libtiff6:arm64. 235s Preparing to unpack .../36-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 235s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 235s Selecting previously unselected package libxft2:arm64. 235s Preparing to unpack .../37-libxft2_2.3.6-1_arm64.deb ... 235s Unpacking libxft2:arm64 (2.3.6-1) ... 235s Selecting previously unselected package libxss1:arm64. 235s Preparing to unpack .../38-libxss1_1%3a1.2.3-1build2_arm64.deb ... 235s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 235s Selecting previously unselected package libtk8.6:arm64. 235s Preparing to unpack .../39-libtk8.6_8.6.13-2_arm64.deb ... 235s Unpacking libtk8.6:arm64 (8.6.13-2) ... 235s Selecting previously unselected package libxt6t64:arm64. 235s Preparing to unpack .../40-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 235s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 235s Selecting previously unselected package zip. 235s Preparing to unpack .../41-zip_3.0-13_arm64.deb ... 235s Unpacking zip (3.0-13) ... 236s Selecting previously unselected package unzip. 236s Preparing to unpack .../42-unzip_6.0-28ubuntu3_arm64.deb ... 236s Unpacking unzip (6.0-28ubuntu3) ... 236s Selecting previously unselected package xdg-utils. 236s Preparing to unpack .../43-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 236s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 236s Selecting previously unselected package r-base-core. 236s Preparing to unpack .../44-r-base-core_4.3.3-2build1_arm64.deb ... 236s Unpacking r-base-core (4.3.3-2build1) ... 236s Selecting previously unselected package r-cran-lattice. 237s Preparing to unpack .../45-r-cran-lattice_0.22-5-1_arm64.deb ... 237s Unpacking r-cran-lattice (0.22-5-1) ... 237s Selecting previously unselected package r-cran-fit.models. 237s Preparing to unpack .../46-r-cran-fit.models_0.64-1_all.deb ... 237s Unpacking r-cran-fit.models (0.64-1) ... 237s Selecting previously unselected package r-cran-mass. 237s Preparing to unpack .../47-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 237s Unpacking r-cran-mass (7.3-60.0.1-1) ... 237s Selecting previously unselected package autopkgtest-satdep. 237s Preparing to unpack .../48-1-autopkgtest-satdep.deb ... 237s Unpacking autopkgtest-satdep (0) ... 237s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 237s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 237s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 237s Setting up libpaper1:arm64 (1.1.29) ... 237s 237s Creating config file /etc/papersize with new version 238s 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(7.3-60.0.1-1) ... 242s Setting up autopkgtest-satdep (0) ... 242s Processing triggers for man-db (2.12.0-3) ... 243s Processing triggers for install-info (7.1-3) ... 243s Processing triggers for libc-bin (2.39-0ubuntu2) ... 251s (Reading database ... 76956 files and directories currently installed.) 251s Removing autopkgtest-satdep (0) ... 251s autopkgtest [18:34:59]: test run-unit-test: [----------------------- 252s BEGIN TEST glmfm.R 252s 253s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 253s Copyright (C) 2024 The R Foundation for Statistical Computing 253s Platform: aarch64-unknown-linux-gnu (64-bit) 253s 253s R is free software and comes with ABSOLUTELY NO WARRANTY. 253s You are welcome to redistribute it under certain conditions. 253s Type 'license()' or 'licence()' for distribution details. 253s 253s R is a collaborative project with many contributors. 253s Type 'contributors()' for more information and 253s 'citation()' on how to cite R or R packages in publications. 253s 253s Type 'demo()' for some demos, 'help()' for on-line help, or 253s 'help.start()' for an HTML browser interface to help. 253s Type 'q()' to quit R. 253s 253s > options(warn = 2) 253s > 253s > library(fit.models) 253s > library(MASS) 253s > 253s > ################################################################################ 253s > # Test models with differenct formulas 253s > ################################################################################ 253s > 253s > counts <- c(18, 17, 15, 20, 10, 20, 25, 13, 12) 253s > outcome <- gl(3, 1, 9) 253s > treatment <- c(gl(3,2), gl(3,1)) 253s > d.AD <- data.frame(treatment, outcome, counts) 253s > 253s > trt <- glm(counts ~ treatment, family = poisson()) 253s > out <- glm(counts ~ outcome, family = poisson()) 253s > 253s > fm1 <- fit.models(trt, out) 253s > print(fm1) 253s 253s Calls: 253s trt: glm(formula = counts ~ treatment, family = poisson()) 253s out: glm(formula = counts ~ outcome, family = poisson()) 253s 253s Coefficients: 253s (Intercept) treatment2 treatment3 outcome2 outcome3 253s trt 2.9957 -0.2231 -0.3567 253s out 3.0445 -0.4543 -0.293 253s 253s > print(fm1.sum <- summary(fm1, correlation = TRUE)) 253s 253s Calls: 253s trt: glm(formula = counts ~ treatment, family = poisson()) 253s out: glm(formula = counts ~ outcome, family = poisson()) 253s 253s Deviance Residuals: 253s Min 1Q Median 3Q Max 253s trt: -1.1272 -0.6887 -0.4550 0.9622 1.506 253s out: -0.9666 -0.6712 -0.1696 0.8472 1.049 253s 253s Coefficients: 253s Estimate Std. Error z value Pr(>|z|) 253s (Intercept): trt: 2.9957 0.1291 23.205 <2e-16 *** 253s out: 3.0445 0.1260 24.165 <2e-16 *** 253s 253s treatment2: trt: -0.2231 0.1936 -1.152 0.2492 253s out: 253s 253s treatment3: trt: -0.3567 0.2012 -1.773 0.0763 . 253s out: 253s 253s outcome2: trt: 253s out: -0.4543 0.2022 -2.247 0.0246 * 253s 253s outcome3: trt: 253s out: -0.2930 0.1927 -1.520 0.1285 253s --- 253s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 253s 253s Null deviance: 253s trt: 10.58 on 8 degrees of freedom 253s out: 10.58 on 8 degrees of freedom 253s 253s Residual deviance: 253s trt: 7.267 on 6 degrees of freedom 253s out: 5.129 on 6 degrees of freedom 253s 253s Correlations: 253s trt: 253s (Intercept) treatment2 253s treatment2 -0.67 253s treatment3 -0.64 0.43 253s 253s out: 253s (Intercept) outcome2 253s outcome2 -0.62 253s outcome3 -0.65 0.41 253s 253s > 253s > pdf("fm1.pdf") 253s > plot(fm1, 1) 253s > plot(fm1, 2) 253s > plot(fm1, 3) 253s > plot(fm1, 4) 253s > plot(fm1, 5) 253s > plot(fm1, 6) 253s > dev.off() 253s null device 253s 1 253s > 253s > rm(fm1, fm1.sum) 253s > file.remove("fm1.pdf") 253s [1] TRUE 253s > 253s > 253s > ################################################################################ 253s > # Test models with different formulas 253s > ################################################################################ 253s > 253s > 253s > ## an example with offsets from Venables & Ripley (2002, p.189) 253s > utils::data(anorexia, package = "MASS") 253s > 253s > offset <- glm(Postwt ~ Prewt + Treat + offset(Prewt), family = gaussian, 253s + data = anorexia) 253s > 253s > no.offset <- glm(Postwt - Prewt ~ Treat, family = gaussian, data = anorexia) 253s > 253s > fm2 <- fit.models(offset, no.offset) 253s > print(fm2) 253s 253s Calls: 253s offset: glm(formula = Postwt ~ Prewt + Treat + offset(Prewt), family = gaussian, 253s data = anorexia) 253s no.offset: glm(formula = Postwt - Prewt ~ Treat, family = gaussian, data = anorexia) 253s 253s Coefficients: 253s (Intercept) Prewt TreatCont TreatFT 253s offset 49.7711 -0.5655 -4.0971 4.563 253s no.offset 3.0069 -3.4569 4.258 253s 253s > print(fm2.sum <- summary(fm2, correlation = TRUE)) 253s 253s Calls: 253s offset: glm(formula = Postwt ~ Prewt + Treat + offset(Prewt), family = gaussian, 253s data = anorexia) 253s no.offset: glm(formula = Postwt - Prewt ~ Treat, family = gaussian, data = anorexia) 253s 253s Deviance Residuals: 253s Min 1Q Median 3Q Max 253s offset: -14.11 -4.277 -0.5484 5.484 15.29 253s no.offset: -12.56 -4.543 -1.0069 3.846 17.89 253s 253s Coefficients: 253s Estimate Std. Error z value Pr(>|z|) 253s (Intercept): offset: 49.7711 13.3910 3.717 0.000410 *** 253s no.offset: 3.0069 1.3980 2.151 0.034992 * 253s 253s Prewt: offset: -0.5655 0.1612 -3.509 0.000803 *** 253s no.offset: 253s 253s TreatCont: offset: -4.0971 1.8935 -2.164 0.033999 * 253s no.offset: -3.4569 2.0333 -1.700 0.093608 . 253s 253s TreatFT: offset: 4.5631 2.1333 2.139 0.036035 * 253s no.offset: 4.2578 2.2996 1.852 0.068376 . 253s --- 253s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 253s 253s Null deviance: 253s offset: 4525 on 71 degrees of freedom 253s no.offset: 4525 on 71 degrees of freedom 253s 253s Residual deviance: 253s offset: 3311 on 68 degrees of freedom 253s no.offset: 3911 on 69 degrees of freedom 253s 253s Correlations: 253s offset: 253s (Intercept) Prewt TreatCont 253s Prewt -1.00 253s TreatCont -0.16 0.10 253s TreatFT -0.02 -0.04 0.41 253s 253s no.offset: 253s (Intercept) TreatCont 253s TreatCont -0.69 253s TreatFT -0.61 0.42 253s 253s > 253s > pdf("fm2.pdf") 253s > plot(fm2, 1) 253s > plot(fm2, 2) 253s > plot(fm2, 3) 253s > plot(fm2, 4) 254s > plot(fm2, 5) 254s > plot(fm2, 6) 254s > dev.off() 254s null device 254s 1 254s > 254s > rm(fm2, fm2.sum) 254s > file.remove("fm2.pdf") 254s [1] TRUE 254s > 254s > 254s > ################################################################################ 254s > # Test models with different formulas and subsets 254s > ################################################################################ 254s > 254s > m1 <- glm(Postwt ~ Prewt + Treat, family = gaussian, 254s + data = subset(anorexia, Prewt > 75)) 254s > 254s > m2 <- glm(Postwt ~ Treat, family = gaussian, data = anorexia) 254s > 254s > fm3 <- fit.models(m1, m2) 254s > print(fm3) 254s 254s Calls: 254s m1: glm(formula = Postwt ~ Prewt + Treat, family = gaussian, data = subset(anorexia, 254s Prewt > 75)) 254s m2: glm(formula = Postwt ~ Treat, family = gaussian, data = anorexia) 254s 254s Coefficients: 254s (Intercept) Prewt TreatCont TreatFT 254s m1 18.2207 0.8093 -4.6651 4.141 254s m2 85.6966 -4.5889 4.798 254s 254s > print(fm3.sum <- summary(fm3, correlation = TRUE)) 254s 254s Calls: 254s m1: glm(formula = Postwt ~ Prewt + Treat, family = gaussian, data = subset(anorexia, 254s Prewt > 75)) 254s m2: glm(formula = Postwt ~ Treat, family = gaussian, data = anorexia) 254s 254s Deviance Residuals: 254s Min 1Q Median 3Q Max 254s m1: -12.31 -4.747 -0.463868 4.579 13.59 254s m2: -15.29 -3.730 -0.002122 4.781 17.90 254s 254s Coefficients: 254s Estimate Std. Error z value Pr(>|z|) 254s (Intercept): m1: 18.2207 15.0442 1.211 0.2304 254s m2: 85.6966 1.3534 63.321 < 2e-16 *** 254s 254s Prewt: m1: 0.8093 0.1803 4.488 3.12e-05 *** 254s m2: 254s 254s TreatCont: m1: -4.6651 1.8353 -2.542 0.0135 * 254s m2: -4.5889 1.9684 -2.331 0.0227 * 254s 254s TreatFT: m1: 4.1408 2.0463 2.024 0.0473 * 254s m2: 4.7976 2.2262 2.155 0.0347 * 254s --- 254s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 254s 254s Null deviance: 254s m1: 4431 on 66 degrees of freedom 254s m2: 4584 on 71 degrees of freedom 254s 254s Residual deviance: 254s m1: 2676 on 63 degrees of freedom 254s m2: 3665 on 69 degrees of freedom 254s 254s Correlations: 254s m1: 254s (Intercept) Prewt TreatCont 254s Prewt -1.00 254s TreatCont -0.09 0.04 254s TreatFT 0.01 -0.06 0.40 254s 254s m2: 254s (Intercept) TreatCont 254s TreatCont -0.69 254s TreatFT -0.61 0.42 254s 254s > 254s > pdf("fm3.pdf") 254s > plot(fm3, 1) 254s > plot(fm3, 2) 254s > plot(fm3, 3) 254s > plot(fm3, 4) 254s > plot(fm3, 5) 254s > plot(fm3, 6) 254s > dev.off() 254s null device 254s 1 254s > 254s > rm(fm3, fm3.sum) 254s > file.remove("fm3.pdf") 254s [1] TRUE 254s > 254s > 254s > ################################################################################ 254s > 254s > 254s > 254s BEGIN TEST lmfm.R 254s 254s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 254s Copyright (C) 2024 The R Foundation for Statistical Computing 254s Platform: aarch64-unknown-linux-gnu (64-bit) 254s 254s R is free software and comes with ABSOLUTELY NO WARRANTY. 254s You are welcome to redistribute it under certain conditions. 254s Type 'license()' or 'licence()' for distribution details. 254s 254s R is a collaborative project with many contributors. 254s Type 'contributors()' for more information and 254s 'citation()' on how to cite R or R packages in publications. 254s 254s Type 'demo()' for some demos, 'help()' for on-line help, or 254s 'help.start()' for an HTML browser interface to help. 254s Type 'q()' to quit R. 254s 254s > options(warn = 2) 254s > 254s > data(stackloss) 254s > 254s > library(fit.models) 254s > library(MASS) 254s > 254s > # add rlm to the lmfm fit.models class 254s > fmclass.add.class("lmfm", "rlm") 254s > 254s > ################################################################################ 254s > # Test original syntax 254s > ################################################################################ 254s > 254s > fm1 <- fit.models(list(Robust = "rlm", LS = "lm"), stack.loss ~ ., data = stackloss) 254s rlm is already registered in the fit.models registry 254s > print(fm1) 254s 254s Calls: 254s Robust: rlm(formula = stack.loss ~ ., data = stackloss) 254s LS: lm(formula = stack.loss ~ ., data = stackloss) 254s 254s Coefficients: 254s (Intercept) Air.Flow Water.Temp Acid.Conc. 254s Robust -41.0265 0.8294 0.9261 -0.128 254s LS -39.9197 0.7156 1.2953 -0.152 254s 254s > print(fm1.sum <- summary(fm1, correlation = TRUE)) 254s 254s Calls: 254s Robust: rlm(formula = stack.loss ~ ., data = stackloss) 254s LS: lm(formula = stack.loss ~ ., data = stackloss) 254s 254s Residual Statistics: 254s Min 1Q Median 3Q Max 254s Robust: -8.918 -1.731 0.06187 1.543 6.502 254s LS: -7.238 -1.712 -0.45509 2.361 5.698 254s 254s Coefficients: 254s Estimate Std. Error t value Pr(>|t|) 254s (Intercept): Robust: -41.0265 9.8073 -4.183 254s LS: -39.9197 11.8960 -3.356 0.00375 ** 254s 254s Air.Flow: Robust: 0.8294 0.1112 7.460 254s LS: 0.7156 0.1349 5.307 5.8e-05 *** 254s 254s Water.Temp: Robust: 0.9261 0.3034 3.052 254s LS: 1.2953 0.3680 3.520 0.00263 ** 254s 254s Acid.Conc.: Robust: -0.1278 0.1289 -0.992 254s LS: -0.1521 0.1563 -0.973 0.34405 254s --- 254s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 254s 254s Residual Scale Estimates: 254s Robust: 2.441 on 17 degrees of freedom 254s LS: 3.243 on 17 degrees of freedom 254s 254s Multiple R-squared: 254s LS: 0.9136 254s 254s Correlations: 254s Robust: 254s (Intercept) Air.Flow Water.Temp 254s Air.Flow 0.18 254s Water.Temp -0.15 -0.74 254s Acid.Conc. -0.90 -0.34 0.00 254s 254s LS: 254s (Intercept) Air.Flow Water.Temp 254s Air.Flow 0.18 254s Water.Temp -0.15 -0.74 254s Acid.Conc. -0.90 -0.34 0.00 254s 254s > 254s > pdf("fm1.pdf") 254s > plot(fm1, 1) 255s > plot(fm1, 2) 255s > plot(fm1, 3) 255s > plot(fm1, 4) 255s > plot(fm1, 5) 255s > plot(fm1, 6) 255s > plot(fm1, 7) 255s > plot(fm1, 8) 255s > plot(fm1, 9) 255s > dev.off() 255s null device 255s 1 255s > 255s > rm(fm1, fm1.sum) 255s > file.remove("fm1.pdf") 255s [1] TRUE 255s > 255s > 255s > ################################################################################ 255s > # Test models with different subsets 255s > ################################################################################ 255s > 255s > complete <- lm(stack.loss ~ ., data = stackloss) 255s > clean <- lm(stack.loss ~ ., data = stackloss, subset = -c(1, 2, 4, 21)) 255s > fm2 <- fit.models(Clean = clean, Complete = complete) 255s > print(fm2) 255s 255s Calls: 255s Clean: lm(formula = stack.loss ~ ., data = stackloss, subset = -c(1, 255s 2, 4, 21)) 255s Complete: lm(formula = stack.loss ~ ., data = stackloss) 255s 255s Coefficients: 255s (Intercept) Air.Flow Water.Temp Acid.Conc. 255s Clean -42.0003 0.9555 0.5556 -0.113 255s Complete -39.9197 0.7156 1.2953 -0.152 255s 255s > print(fm2.sum <- summary(fm2, correlation = TRUE)) 255s 255s Calls: 255s Clean: lm(formula = stack.loss ~ ., data = stackloss, subset = -c(1, 255s 2, 4, 21)) 255s Complete: lm(formula = stack.loss ~ ., data = stackloss) 255s 255s Residual Statistics: 255s Min 1Q Median 3Q Max 255s Clean: -3.122 -1.333 -0.03041 0.9755 3.652 255s Complete: -7.238 -1.712 -0.45509 2.3614 5.698 255s 255s Coefficients: 255s Estimate Std. Error t value Pr(>|t|) 255s (Intercept): Clean: -42.00028 7.08242 -5.930 4.98e-05 *** 255s Complete: -39.91967 11.89600 -3.356 0.00375 ** 255s 255s Air.Flow: Clean: 0.95550 0.11018 8.672 9.15e-07 *** 255s Complete: 0.71564 0.13486 5.307 5.80e-05 *** 255s 255s Water.Temp: Clean: 0.55561 0.25128 2.211 0.04556 * 255s Complete: 1.29529 0.36802 3.520 0.00263 ** 255s 255s Acid.Conc.: Clean: -0.11339 0.09821 -1.155 0.26904 255s Complete: -0.15212 0.15629 -0.973 0.34405 255s --- 255s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 255s 255s Residual Scale Estimates: 255s Clean: 1.896 on 13 degrees of freedom 255s Complete: 3.243 on 17 degrees of freedom 255s 255s Multiple R-squared: 255s Clean: 0.9428 255s Complete: 0.9136 255s 255s Correlations: 255s Clean: 255s (Intercept) Air.Flow Water.Temp 255s Air.Flow 0.01 255s Water.Temp -0.10 -0.61 255s Acid.Conc. -0.79 -0.40 -0.07 255s 255s Complete: 255s (Intercept) Air.Flow Water.Temp 255s Air.Flow 0.18 255s Water.Temp -0.15 -0.74 255s Acid.Conc. -0.90 -0.34 0.00 255s 255s > 255s > pdf("fm2.pdf") 255s > plot(fm2, 1) 255s > plot(fm2, 2) 255s > plot(fm2, 3) 255s > plot(fm2, 4) 255s > plot(fm2, 5) 255s > plot(fm2, 6) 255s > plot(fm2, 7) 255s > plot(fm2, 8) 255s > plot(fm2, 9) 255s > dev.off() 255s null device 255s 1 255s > 255s > rm(fm2, fm2.sum) 255s > file.remove("fm2.pdf") 255s [1] TRUE 255s > 255s > 255s > ################################################################################ 255s > # Test models with different formulas 255s > ################################################################################ 255s > 255s > m1 <- lm(stack.loss ~ Air.Flow + Water.Temp, data = stackloss) 255s > m2 <- lm(stack.loss ~ Water.Temp + Acid.Conc., data = stackloss) 255s > fm3 <- fit.models(m1, m2) 255s > print(fm3) 255s 255s Calls: 255s m1: lm(formula = stack.loss ~ Air.Flow + Water.Temp, data = stackloss) 255s m2: lm(formula = stack.loss ~ Water.Temp + Acid.Conc., data = stackloss) 255s 255s Coefficients: 255s (Intercept) Air.Flow Water.Temp Acid.Conc. 255s m1 -50.3588 0.6712 1.2954 255s m2 -51.2361 2.7320 0.129 255s 255s > print(fm3.sum <- summary(fm3, correlation = TRUE)) 255s 255s Calls: 255s m1: lm(formula = stack.loss ~ Air.Flow + Water.Temp, data = stackloss) 255s m2: lm(formula = stack.loss ~ Water.Temp + Acid.Conc., data = stackloss) 255s 255s Residual Statistics: 255s Min 1Q Median 3Q Max 255s m1: -7.529 -1.75 0.1894 2.116 5.659 255s m2: -7.820 -2.86 -0.6656 3.123 8.329 255s 255s Coefficients: 255s Estimate Std. Error t value Pr(>|t|) 255s (Intercept): m1: -50.3588 5.1383 -9.801 1.22e-08 *** 255s m2: -51.2361 18.5374 -2.764 0.01279 * 255s 255s Air.Flow: m1: 0.6712 0.1267 5.298 4.90e-05 *** 255s m2: 255s 255s Water.Temp: m1: 1.2954 0.3675 3.525 0.00242 ** 255s m2: 2.7320 0.3949 6.919 1.82e-06 *** 255s 255s Acid.Conc.: m1: 255s m2: 0.1290 0.2329 0.554 0.58657 255s --- 255s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 255s 255s Residual Scale Estimates: 255s m1: 3.239 on 18 degrees of freedom 255s m2: 5.137 on 18 degrees of freedom 255s 255s Multiple R-squared: 255s m1: 0.9088 255s m2: 0.7704 255s 255s Correlations: 255s m1: 255s (Intercept) Air.Flow 255s Air.Flow -0.31 255s Water.Temp -0.34 -0.78 255s 255s m2: 255s (Intercept) Water.Temp 255s Water.Temp -0.03 255s Acid.Conc. -0.91 -0.39 255s 255s > 255s > pdf("fm3.pdf") 255s > plot(fm3, 1) 256s > plot(fm3, 2) 256s > plot(fm3, 3) 256s > plot(fm3, 4) 256s > plot(fm3, 5) 256s > plot(fm3, 6) 256s > plot(fm3, 7) 256s > plot(fm3, 8) 256s > plot(fm3, 9) 256s > dev.off() 256s null device 256s 1 256s > 256s > rm(fm3, fm3.sum) 256s > file.remove("fm3.pdf") 256s [1] TRUE 256s > 256s > 256s > ################################################################################ 256s > # Test models with different formulas and different subsets 256s > ################################################################################ 256s > 256s > m1 <- lm(stack.loss ~ Air.Flow + Water.Temp, data = stackloss, subset = -c(1, 2, 4, 21)) 256s > m2 <- lm(stack.loss ~ Water.Temp + Acid.Conc., data = stackloss) 256s > fm4 <- fit.models(m1, m2) 256s > print(fm4) 256s 256s Calls: 256s m1: lm(formula = stack.loss ~ Air.Flow + Water.Temp, data = stackloss, 256s subset = -c(1, 2, 4, 21)) 256s m2: lm(formula = stack.loss ~ Water.Temp + Acid.Conc., data = stackloss) 256s 256s Coefficients: 256s (Intercept) Air.Flow Water.Temp Acid.Conc. 256s m1 -48.4451 0.9052 0.5367 256s m2 -51.2361 2.7320 0.129 256s 256s > print(fm4.sum <- summary(fm4, correlation = TRUE)) 256s 256s Calls: 256s m1: lm(formula = stack.loss ~ Air.Flow + Water.Temp, data = stackloss, 256s subset = -c(1, 2, 4, 21)) 256s m2: lm(formula = stack.loss ~ Water.Temp + Acid.Conc., data = stackloss) 256s 256s Residual Statistics: 256s Min 1Q Median 3Q Max 256s m1: -2.719 -1.486 0.2814 0.9865 4.136 256s m2: -7.820 -2.860 -0.6656 3.1235 8.329 256s 256s Coefficients: 256s Estimate Std. Error t value Pr(>|t|) 256s (Intercept): m1: -48.4451 4.4107 -10.983 2.89e-08 *** 256s m2: -51.2361 18.5374 -2.764 0.0128 * 256s 256s Air.Flow: m1: 0.9052 0.1024 8.839 4.21e-07 *** 256s m2: 256s 256s Water.Temp: m1: 0.5367 0.2537 2.115 0.0528 . 256s m2: 2.7320 0.3949 6.919 1.82e-06 *** 256s 256s Acid.Conc.: m1: 256s m2: 0.1290 0.2329 0.554 0.5866 256s --- 256s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 256s 256s Residual Scale Estimates: 256s m1: 1.918 on 14 degrees of freedom 256s m2: 5.137 on 18 degrees of freedom 256s 256s Multiple R-squared: 256s m1: 0.9369 256s m2: 0.7704 256s 256s Correlations: 256s m1: 256s (Intercept) Air.Flow 256s Air.Flow -0.53 256s Water.Temp -0.24 -0.69 256s 256s m2: 256s (Intercept) Water.Temp 256s Water.Temp -0.03 256s Acid.Conc. -0.91 -0.39 256s 256s > 256s > pdf("fm4.pdf") 256s > plot(fm4, 1) 256s > plot(fm4, 2) 256s > plot(fm4, 3) 256s > plot(fm4, 4) 256s > plot(fm4, 5) 256s > plot(fm4, 6) 256s > plot(fm4, 7) 257s > plot(fm4, 8) 257s > plot(fm4, 9) 257s > dev.off() 257s null device 257s 1 257s > 257s > rm(fm4, fm4.sum) 257s > file.remove("fm4.pdf") 257s [1] TRUE 257s > 257s > 257s > ################################################################################ 257s > # Test simple linear regression 257s > ################################################################################ 257s > 257s > fm5 <- fit.models(list(Robust = "rlm", LS = "lm"), stack.loss ~ Acid.Conc., data = stackloss) 257s > print(fm5) 257s 257s Calls: 257s Robust: rlm(formula = stack.loss ~ Acid.Conc., data = stackloss) 257s LS: lm(formula = stack.loss ~ Acid.Conc., data = stackloss) 257s 257s Coefficients: 257s (Intercept) Acid.Conc. 257s Robust -32.07 0.547 257s LS -47.96 0.759 257s 257s > print(fm5.sum <- summary(fm5, correlation = TRUE)) 257s 257s Calls: 257s Robust: rlm(formula = stack.loss ~ Acid.Conc., data = stackloss) 257s LS: lm(formula = stack.loss ~ Acid.Conc., data = stackloss) 257s 257s Residual Statistics: 257s Min 1Q Median 3Q Max 257s Robust: -8.649 -2.744 0.1617 2.446 25.35 257s LS: -11.584 -5.584 -3.0659 1.247 22.42 257s 257s Coefficients: 257s Estimate Std. Error t value Pr(>|t|) 257s (Intercept): Robust: -32.0654 21.6292 -1.483 257s LS: -47.9632 34.5044 -1.390 0.1806 257s 257s Acid.Conc.: Robust: 0.5474 0.2502 2.188 257s LS: 0.7590 0.3992 1.901 0.0725 . 257s --- 257s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 257s 257s Residual Scale Estimates: 257s Robust: 4.037 on 19 degrees of freedom 257s LS: 9.565 on 19 degrees of freedom 257s 257s Multiple R-squared: 257s LS: 0.1599 257s 257s Correlations: 257s Robust: 257s (Intercept) 257s Acid.Conc. -1.00 257s 257s LS: 257s (Intercept) 257s Acid.Conc. -1.00 257s 257s > 257s > pdf("fm5.pdf") 257s > plot(fm5, 1) 257s > plot(fm5, 2) 257s > plot(fm5, 3) 257s > plot(fm5, 4) 257s > plot(fm5, 5) 257s > plot(fm5, 6) 257s > plot(fm5, 7) 257s > plot(fm5, 8) 257s > plot(fm5, 9) 257s > plot(fm5, 10) 257s > dev.off() 257s null device 257s 1 257s > 257s > rm(fm5, fm5.sum) 257s > file.remove("fm5.pdf") 257s [1] TRUE 257s > 257s > 257s > ################################################################################ 257s > 257s > 257s > 258s autopkgtest [18:35:06]: test run-unit-test: -----------------------] 258s run-unit-test PASS 258s autopkgtest [18:35:06]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 258s autopkgtest [18:35:06]: test pkg-r-autopkgtest: preparing testbed 260s Reading package lists... 260s Building dependency tree... 260s Reading state information... 261s Starting pkgProblemResolver with broken count: 0 261s Starting 2 pkgProblemResolver with broken count: 0 261s Done 262s The following additional packages will be installed: 262s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 262s dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 262s gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 262s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 262s libasan8 libatomic1 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 262s libcrypt-dev libgcc-13-dev libgfortran-13-dev libhwasan0 libicu-dev libisl23 262s libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 262s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0 262s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev 262s libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config 262s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev 262s Suggested packages: 262s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 262s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 262s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 262s liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc 262s libstdc++-13-doc texlive-base texlive-latex-base texlive-plain-generic 262s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 262s texlive-latex-recommended texlive-latex-extra texinfo 262s Recommended packages: 262s bzip2-doc manpages manpages-dev libc-devtools libpng-tools 262s The following NEW packages will be installed: 262s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 262s cpp-aarch64-linux-gnu dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu 262s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 262s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 262s gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev 262s libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev 262s libgfortran-13-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 262s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 262s libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev 262s libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev 262s libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config pkg-r-autopkgtest 262s pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev 262s 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded. 262s Need to get 92.8 MB/92.8 MB of archives. 262s After this operation, 343 MB of additional disk space will be used. 262s Get:1 /tmp/autopkgtest.macJhp/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [732 B] 262s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 262s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 263s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 263s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 263s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 263s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 263s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 263s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 263s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 263s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 263s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 263s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 263s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 263s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 263s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 263s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 263s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 263s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 263s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 263s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 263s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 263s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 263s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 264s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 264s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 264s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 264s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 264s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 264s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 264s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 264s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 264s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 264s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 264s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 264s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 264s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 264s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 264s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 264s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 264s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 264s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 264s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 265s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 265s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 265s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 265s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 265s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 265s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 265s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 265s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 265s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 265s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 265s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 265s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 265s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 265s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 265s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 265s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 265s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 265s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 265s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 266s Fetched 92.8 MB in 3s (32.7 MB/s) 266s Selecting previously unselected package libc-dev-bin. 266s 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76956 files and directories currently installed.) 266s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 266s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 266s Selecting previously unselected package linux-libc-dev:arm64. 266s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_arm64.deb ... 266s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 266s Selecting previously unselected package libcrypt-dev:arm64. 266s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 266s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 266s Selecting previously unselected package libtirpc-dev:arm64. 266s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 266s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 266s Selecting previously unselected package libnsl-dev:arm64. 266s Preparing to unpack .../04-libnsl-dev_1.3.0-3_arm64.deb ... 266s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 267s Selecting previously unselected package rpcsvc-proto. 267s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 267s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 267s Selecting previously unselected package libc6-dev:arm64. 267s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_arm64.deb ... 267s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 267s Selecting previously unselected package libisl23:arm64. 268s Preparing to unpack .../07-libisl23_0.26-3_arm64.deb ... 268s Unpacking libisl23:arm64 (0.26-3) ... 268s Selecting previously unselected package libmpc3:arm64. 268s Preparing to unpack .../08-libmpc3_1.3.1-1_arm64.deb ... 268s Unpacking libmpc3:arm64 (1.3.1-1) ... 268s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 268s Preparing to unpack .../09-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 268s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 268s Selecting previously unselected package cpp-13. 268s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 268s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 268s Selecting previously unselected package cpp-aarch64-linux-gnu. 268s Preparing to unpack .../11-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 268s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 268s Selecting previously unselected package cpp. 268s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 268s Unpacking cpp (4:13.2.0-7ubuntu1) ... 268s Selecting previously unselected package libcc1-0:arm64. 268s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libitm1:arm64. 268s Preparing to unpack .../14-libitm1_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libatomic1:arm64. 268s Preparing to unpack .../15-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libasan8:arm64. 268s Preparing to unpack .../16-libasan8_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package liblsan0:arm64. 268s Preparing to unpack .../17-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libtsan2:arm64. 269s Preparing to unpack .../18-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 269s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 269s Selecting previously unselected package libubsan1:arm64. 269s Preparing to unpack .../19-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 269s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 269s Selecting previously unselected package libhwasan0:arm64. 269s Preparing to unpack .../20-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 269s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 269s Selecting previously unselected package libgcc-13-dev:arm64. 269s Preparing to unpack .../21-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 269s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 269s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 269s Preparing to unpack .../22-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 269s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 270s Selecting previously unselected package gcc-13. 270s Preparing to unpack .../23-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 270s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 270s Selecting previously unselected package gcc-aarch64-linux-gnu. 270s Preparing to unpack .../24-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 270s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 270s Selecting previously unselected package gcc. 271s Preparing to unpack .../25-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 271s Unpacking gcc (4:13.2.0-7ubuntu1) ... 271s Selecting previously unselected package libstdc++-13-dev:arm64. 271s Preparing to unpack .../26-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 271s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 271s Selecting previously unselected package g++-13-aarch64-linux-gnu. 271s Preparing to unpack .../27-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 271s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 272s Selecting previously unselected package g++-13. 272s Preparing to unpack .../28-g++-13_13.2.0-17ubuntu2_arm64.deb ... 272s Unpacking g++-13 (13.2.0-17ubuntu2) ... 272s Selecting previously unselected package g++-aarch64-linux-gnu. 272s Preparing to unpack .../29-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 272s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 272s Selecting previously unselected package g++. 272s Preparing to unpack .../30-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 272s Unpacking g++ (4:13.2.0-7ubuntu1) ... 272s Selecting previously unselected package build-essential. 273s Preparing to unpack .../31-build-essential_12.10ubuntu1_arm64.deb ... 273s Unpacking build-essential (12.10ubuntu1) ... 273s Selecting previously unselected package dctrl-tools. 273s Preparing to unpack .../32-dctrl-tools_2.24-3build2_arm64.deb ... 273s Unpacking dctrl-tools (2.24-3build2) ... 273s Selecting previously unselected package libgfortran-13-dev:arm64. 273s Preparing to unpack .../33-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 273s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 273s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 273s Preparing to unpack .../34-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 273s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 274s Selecting previously unselected package gfortran-13. 274s Preparing to unpack .../35-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 274s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 274s Selecting previously unselected package gfortran-aarch64-linux-gnu. 274s Preparing to unpack .../36-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 274s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 274s Selecting previously unselected package gfortran. 274s Preparing to unpack .../37-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 274s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 274s Selecting previously unselected package icu-devtools. 274s Preparing to unpack .../38-icu-devtools_74.2-1ubuntu1_arm64.deb ... 274s Unpacking icu-devtools (74.2-1ubuntu1) ... 274s Selecting previously unselected package libblas-dev:arm64. 274s Preparing to unpack .../39-libblas-dev_3.12.0-3_arm64.deb ... 274s Unpacking libblas-dev:arm64 (3.12.0-3) ... 274s Selecting previously unselected package libbz2-dev:arm64. 274s Preparing to unpack .../40-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 274s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 274s Selecting previously unselected package libicu-dev:arm64. 275s Preparing to unpack .../41-libicu-dev_74.2-1ubuntu1_arm64.deb ... 275s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 275s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 275s Preparing to unpack .../42-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 275s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 275s Selecting previously unselected package libjpeg8-dev:arm64. 275s Preparing to unpack .../43-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 275s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 275s Selecting previously unselected package libjpeg-dev:arm64. 275s Preparing to unpack .../44-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 275s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 275s Selecting previously unselected package liblapack-dev:arm64. 275s Preparing to unpack .../45-liblapack-dev_3.12.0-3_arm64.deb ... 275s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 275s Selecting previously unselected package libncurses-dev:arm64. 275s Preparing to unpack .../46-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 275s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 275s Selecting previously unselected package libpcre2-16-0:arm64. 275s Preparing to unpack .../47-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 275s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 275s Selecting previously unselected package libpcre2-32-0:arm64. 275s Preparing to unpack .../48-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 275s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 275s Selecting previously unselected package libpcre2-posix3:arm64. 275s Preparing to unpack .../49-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 275s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 276s Selecting previously unselected package libpcre2-dev:arm64. 276s Preparing to unpack .../50-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 276s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 276s Selecting previously unselected package libpkgconf3:arm64. 276s Preparing to unpack .../51-libpkgconf3_1.8.1-2_arm64.deb ... 276s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 276s Selecting previously unselected package zlib1g-dev:arm64. 276s Preparing to unpack .../52-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 276s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 276s Selecting previously unselected package libpng-dev:arm64. 276s Preparing to unpack .../53-libpng-dev_1.6.43-3_arm64.deb ... 276s Unpacking libpng-dev:arm64 (1.6.43-3) ... 276s Selecting previously unselected package libreadline-dev:arm64. 276s Preparing to unpack .../54-libreadline-dev_8.2-3.1_arm64.deb ... 276s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 276s Selecting previously unselected package pkgconf-bin. 276s Preparing to unpack .../55-pkgconf-bin_1.8.1-2_arm64.deb ... 276s Unpacking pkgconf-bin (1.8.1-2) ... 276s Selecting previously unselected package pkgconf:arm64. 276s Preparing to unpack .../56-pkgconf_1.8.1-2_arm64.deb ... 276s Unpacking pkgconf:arm64 (1.8.1-2) ... 276s Selecting previously unselected package pkg-config:arm64. 276s Preparing to unpack .../57-pkg-config_1.8.1-2_arm64.deb ... 276s Unpacking pkg-config:arm64 (1.8.1-2) ... 276s Selecting previously unselected package liblzma-dev:arm64. 276s Preparing to unpack .../58-liblzma-dev_5.4.5-0.3_arm64.deb ... 276s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 276s Selecting previously unselected package r-base-dev. 276s Preparing to unpack .../59-r-base-dev_4.3.3-2build1_all.deb ... 276s Unpacking r-base-dev (4.3.3-2build1) ... 276s Selecting previously unselected package pkg-r-autopkgtest. 276s Preparing to unpack .../60-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 276s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 277s Selecting previously unselected package autopkgtest-satdep. 277s Preparing to unpack .../61-2-autopkgtest-satdep.deb ... 277s Unpacking autopkgtest-satdep (0) ... 277s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 277s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 277s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 277s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 277s Setting up libpkgconf3:arm64 (1.8.1-2) ... 277s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 277s Setting up libmpc3:arm64 (1.3.1-1) ... 277s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 277s Setting up icu-devtools (74.2-1ubuntu1) ... 277s Setting up pkgconf-bin (1.8.1-2) ... 277s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 277s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 277s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 277s Setting up libnsl-dev:arm64 (1.3.0-3) ... 277s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 277s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 277s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 277s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 277s Setting up libisl23:arm64 (0.26-3) ... 277s Setting up libc-dev-bin (2.39-0ubuntu2) ... 277s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 277s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 277s Setting up libblas-dev:arm64 (3.12.0-3) ... 277s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 277s Setting up dctrl-tools (2.24-3build2) ... 277s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 277s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 277s Setting up pkgconf:arm64 (1.8.1-2) ... 277s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 277s Setting up liblapack-dev:arm64 (3.12.0-3) ... 277s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 277s Setting up pkg-config:arm64 (1.8.1-2) ... 277s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 277s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 277s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 277s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 277s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 277s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 277s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 277s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 277s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 277s Setting up cpp-13 (13.2.0-17ubuntu2) ... 277s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 277s Setting up libreadline-dev:arm64 (8.2-3.1) ... 277s Setting up gcc-13 (13.2.0-17ubuntu2) ... 277s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 277s Setting up cpp (4:13.2.0-7ubuntu1) ... 277s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 277s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 277s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 277s Setting up g++-13 (13.2.0-17ubuntu2) ... 277s Setting up libpng-dev:arm64 (1.6.43-3) ... 277s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 277s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 277s Setting up gcc (4:13.2.0-7ubuntu1) ... 277s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 277s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 277s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 277s Setting up gfortran (4:13.2.0-7ubuntu1) ... 277s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 277s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 277s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 277s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 277s Setting up g++ (4:13.2.0-7ubuntu1) ... 277s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 277s Setting up build-essential (12.10ubuntu1) ... 277s Setting up r-base-dev (4.3.3-2build1) ... 277s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 277s Setting up autopkgtest-satdep (0) ... 277s Processing triggers for man-db (2.12.0-3) ... 278s Processing triggers for install-info (7.1-3) ... 278s Processing triggers for libc-bin (2.39-0ubuntu2) ... 281s (Reading database ... 80515 files and directories currently installed.) 281s Removing autopkgtest-satdep (0) ... 282s autopkgtest [18:35:30]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 282s autopkgtest [18:35:30]: test pkg-r-autopkgtest: [----------------------- 283s Test: Try to load the R library fit.models 283s 283s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 283s Copyright (C) 2024 The R Foundation for Statistical Computing 283s Platform: aarch64-unknown-linux-gnu (64-bit) 283s 283s R is free software and comes with ABSOLUTELY NO WARRANTY. 283s You are welcome to redistribute it under certain conditions. 283s Type 'license()' or 'licence()' for distribution details. 283s 283s R is a collaborative project with many contributors. 283s Type 'contributors()' for more information and 283s 'citation()' on how to cite R or R packages in publications. 283s 283s Type 'demo()' for some demos, 'help()' for on-line help, or 283s 'help.start()' for an HTML browser interface to help. 283s Type 'q()' to quit R. 283s 283s > library('fit.models') 283s > 283s > 283s Other tests are currently unsupported! 283s They will be progressively added. 283s autopkgtest [18:35:31]: test pkg-r-autopkgtest: -----------------------] 284s autopkgtest [18:35:32]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 284s pkg-r-autopkgtest PASS 284s autopkgtest [18:35:32]: @@@@@@@@@@@@@@@@@@@@ summary 284s run-unit-test PASS 284s pkg-r-autopkgtest PASS 288s Creating nova instance adt-noble-arm64-r-cran-fit.models-20240316-183048-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...