0s autopkgtest [18:30:37]: starting date and time: 2024-03-16 18:30:37+0000
  0s autopkgtest [18:30:37]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data
  0s autopkgtest [18:30:37]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ma936k9q/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-fingerprint --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-10.secgroup --name adt-noble-arm64-r-cran-fingerprint-20240316-183037-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 82s autopkgtest [18:31:59]: testbed dpkg architecture: arm64
 83s autopkgtest [18:32:00]: testbed apt version: 2.7.12
 83s autopkgtest [18:32:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 83s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
 83s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB]
 84s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB]
 84s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
 84s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
 84s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB]
 84s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
 84s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
 84s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
 84s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB]
 84s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
 84s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB]
 84s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
 86s Fetched 9084 kB in 2s (5368 kB/s)
 86s Reading package lists...
 90s Reading package lists...
 90s Building dependency tree...
 90s Reading state information...
 90s Calculating upgrade...
 91s The following packages will be REMOVED:
 91s   libglib2.0-0 libssl3
 91s The following NEW packages will be installed:
 91s   libglib2.0-0t64 libssl3t64 xdg-user-dirs
 91s The following packages have been kept back:
 91s   curl
 91s The following packages will be upgraded:
 91s   gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common
 91s   ubuntu-minimal ubuntu-standard
 91s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded.
 91s Need to get 4613 kB of archives.
 91s After this operation, 211 kB of additional disk space will be used.
 91s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB]
 91s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB]
 91s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB]
 91s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB]
 91s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB]
 91s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B]
 91s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
 91s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB]
 91s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB]
 91s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB]
 92s Fetched 4613 kB in 1s (6702 kB/s)
 93s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
 93s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ...
 93s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
 93s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested:
 93s  udisks2 depends on libglib2.0-0 (>= 2.77.0).
 93s  shared-mime-info depends on libglib2.0-0 (>= 2.75.3).
 93s  python3-gi depends on libglib2.0-0 (>= 2.77.0).
 93s  python3-dbus depends on libglib2.0-0 (>= 2.16.0).
 93s  netplan.io depends on libglib2.0-0 (>= 2.70.0).
 93s  netplan-generator depends on libglib2.0-0 (>= 2.70.0).
 93s  libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0).
 93s  libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0).
 93s  libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
 93s  libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56).
 93s  libqmi-proxy depends on libglib2.0-0 (>= 2.30.0).
 93s  libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0).
 93s  libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
 93s  libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
 93s  libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3).
 93s  libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0).
 93s  libmbim-proxy depends on libglib2.0-0 (>= 2.56).
 93s  libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56).
 93s  libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
 93s  libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3).
 93s  libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3).
 93s  libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
 93s  libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0).
 93s  libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0).
 93s  libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3).
 93s  libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2).
 93s  fwupd depends on libglib2.0-0 (>= 2.79.0).
 93s  bolt depends on libglib2.0-0 (>= 2.56.0).
 93s 
 93s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
 93s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ...
 93s Selecting previously unselected package libglib2.0-0t64:arm64.
 93s (Reading database ... 
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(Reading database ... 74733 files and directories currently installed.)
 93s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ...
 93s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled...
 93s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm'
 93s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
 93s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ...
 93s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ...
 93s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested:
 93s  wget depends on libssl3 (>= 3.0.0).
 93s  u-boot-tools depends on libssl3 (>= 3.0.0).
 93s  tnftp depends on libssl3 (>= 3.0.0).
 93s  tcpdump depends on libssl3 (>= 3.0.0).
 93s  systemd-resolved depends on libssl3 (>= 3.0.0).
 93s  systemd depends on libssl3 (>= 3.0.0).
 93s  sudo depends on libssl3 (>= 3.0.0).
 93s  sbsigntool depends on libssl3 (>= 3.0.0).
 93s  rsync depends on libssl3 (>= 3.0.0).
 93s  python3-cryptography depends on libssl3 (>= 3.0.0).
 93s  openssh-server depends on libssl3 (>= 3.0.10).
 93s  openssh-client depends on libssl3 (>= 3.0.10).
 93s  mtd-utils depends on libssl3 (>= 3.0.0).
 93s  mokutil depends on libssl3 (>= 3.0.0).
 93s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
 93s  libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0).
 93s  libssh-4:arm64 depends on libssl3 (>= 3.0.0).
 93s  libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0).
 93s  libsasl2-2:arm64 depends on libssl3 (>= 3.0.0).
 93s  libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0).
 93s  libnvme1 depends on libssl3 (>= 3.0.0).
 93s  libkrb5-3:arm64 depends on libssl3 (>= 3.0.0).
 93s  libkmod2:arm64 depends on libssl3 (>= 3.0.0).
 93s  libfido2-1:arm64 depends on libssl3 (>= 3.0.0).
 93s  libcurl4:arm64 depends on libssl3 (>= 3.0.0).
 93s  libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0).
 93s  kmod depends on libssl3 (>= 3.0.0).
 93s  dhcpcd-base depends on libssl3 (>= 3.0.0).
 93s  bind9-libs:arm64 depends on libssl3 (>= 3.0.0).
 93s 
 93s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
 93s Removing libssl3:arm64 (3.0.10-1ubuntu4) ...
 93s Selecting previously unselected package libssl3t64:arm64.
 93s (Reading database ... 
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(Reading database ... 74747 files and directories currently installed.)
 93s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ...
 93s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ...
 94s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ...
 94s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
 94s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ...
 94s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ...
 94s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ...
 94s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
 94s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ...
 94s Unpacking ubuntu-minimal (1.536) over (1.535) ...
 94s Selecting previously unselected package xdg-user-dirs.
 94s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ...
 94s Unpacking xdg-user-dirs (0.18-1) ...
 94s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ...
 94s Unpacking ubuntu-standard (1.536) over (1.535) ...
 94s Setting up ubuntu-minimal (1.536) ...
 94s Setting up xdg-user-dirs (0.18-1) ...
 94s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ...
 94s Setting up libtirpc-common (1.3.4+ds-1.1) ...
 94s Setting up ubuntu-standard (1.536) ...
 94s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
 94s No schema files found: doing nothing.
 94s Setting up libglib2.0-data (2.79.3-3ubuntu5) ...
 94s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ...
 94s Setting up openssl (3.0.13-0ubuntu1) ...
 94s Setting up readline-common (8.2-3.1) ...
 94s Processing triggers for man-db (2.12.0-3) ...
 95s Processing triggers for install-info (7.1-3) ...
 95s Processing triggers for libc-bin (2.39-0ubuntu2) ...
 96s Reading package lists...
 96s Building dependency tree...
 96s Reading state information...
 96s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
 97s sh: Attempting to set up Debian/Ubuntu apt sources automatically
 97s sh: Distribution appears to be Ubuntu
 98s Reading package lists...
 98s Building dependency tree...
 98s Reading state information...
 99s eatmydata is already the newest version (131-1).
 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 99s Reading package lists...
 99s Building dependency tree...
 99s Reading state information...
100s dbus is already the newest version (1.14.10-4ubuntu1).
100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
100s Reading package lists...
101s Building dependency tree...
101s Reading state information...
101s rng-tools-debian is already the newest version (2.4).
101s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
101s Reading package lists...
102s Building dependency tree...
102s Reading state information...
102s The following packages will be REMOVED:
102s   cloud-init* python3-configobj* python3-debconf*
103s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
103s After this operation, 3252 kB disk space will be freed.
103s (Reading database ... 
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(Reading database ... 74774 files and directories currently installed.)
103s Removing cloud-init (24.1.1-0ubuntu1) ...
104s Removing python3-configobj (5.0.8-3) ...
104s Removing python3-debconf (1.5.86) ...
104s Processing triggers for man-db (2.12.0-3) ...
104s (Reading database ... 
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(Reading database ... 74385 files and directories currently installed.)
104s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ...
105s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
105s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
105s invoke-rc.d: policy-rc.d denied execution of try-restart.
105s Reading package lists...
105s Building dependency tree...
105s Reading state information...
106s linux-generic is already the newest version (6.8.0-11.11+1).
106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
107s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
107s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
107s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
109s Reading package lists...
109s Reading package lists...
109s Building dependency tree...
109s Reading state information...
110s Calculating upgrade...
110s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
110s Reading package lists...
110s Building dependency tree...
110s Reading state information...
111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
111s autopkgtest [18:32:28]: rebooting testbed after setup commands that affected boot
139s autopkgtest [18:32:56]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
141s autopkgtest [18:32:58]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-fingerprint
144s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-fingerprint 3.5.7-2build1 (dsc) [2143 B]
144s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-fingerprint 3.5.7-2build1 (tar) [32.8 kB]
144s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-fingerprint 3.5.7-2build1 (diff) [2544 B]
145s gpgv: Signature made Sat May 30 09:58:35 2020 UTC
145s gpgv:                using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2
145s gpgv: Can't check signature: No public key
145s dpkg-source: warning: cannot verify inline signature for ./r-cran-fingerprint_3.5.7-2build1.dsc: no acceptable signature found
145s autopkgtest [18:33:02]: testing package r-cran-fingerprint version 3.5.7-2build1
145s autopkgtest [18:33:02]: build not needed
146s autopkgtest [18:33:03]: test run-unit-test: preparing testbed
148s Reading package lists...
149s Building dependency tree...
149s Reading state information...
149s Starting pkgProblemResolver with broken count: 0
149s Starting 2 pkgProblemResolver with broken count: 0
149s Done
150s The following additional packages will be installed:
150s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
150s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
150s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
150s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
150s   libpaper-utils libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
150s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
150s   libxft2 libxrender1 libxss1 libxt6 r-base-core r-cran-fingerprint
150s   r-cran-runit unzip x11-common xdg-utils zip
150s Suggested packages:
150s   tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
150s Recommended packages:
150s   r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl
150s   libx11-protocol-perl x11-utils x11-xserver-utils
150s The following NEW packages will be installed:
150s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
150s   fonts-dejavu-mono libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1
150s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0
150s   libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0
150s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
150s   libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6
150s   libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6
150s   r-base-core r-cran-fingerprint r-cran-runit unzip x11-common xdg-utils zip
150s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded.
150s Need to get 37.1 MB/37.1 MB of archives.
150s After this operation, 76.0 MB of additional disk space will be used.
150s Get:1 /tmp/autopkgtest.A0Qtwo/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [724 B]
150s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
150s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
150s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
150s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
150s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB]
150s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB]
150s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
150s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
151s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
151s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
151s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
151s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB]
151s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
151s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
151s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
151s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
151s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
151s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
151s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB]
151s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
151s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
151s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB]
151s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
151s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB]
151s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB]
151s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB]
151s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB]
151s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB]
151s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB]
151s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B]
151s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
151s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB]
151s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB]
151s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
151s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
151s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
151s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
151s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B]
151s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB]
151s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB]
151s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB]
151s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB]
151s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
151s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB]
152s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fingerprint arm64 3.5.7-2build1 [231 kB]
152s Get:47 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB]
153s Preconfiguring packages ...
153s Fetched 37.1 MB in 2s (20.9 MB/s)
153s Selecting previously unselected package fonts-dejavu-mono.
153s (Reading database ... 
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153s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
153s Unpacking fonts-dejavu-mono (2.37-8) ...
153s Selecting previously unselected package fonts-dejavu-core.
153s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
153s Unpacking fonts-dejavu-core (2.37-8) ...
153s Selecting previously unselected package fontconfig-config.
153s Preparing to unpack .../02-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
154s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
154s Selecting previously unselected package libfontconfig1:arm64.
154s Preparing to unpack .../03-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
154s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
154s Selecting previously unselected package fontconfig.
154s Preparing to unpack .../04-fontconfig_2.15.0-1ubuntu1_arm64.deb ...
154s Unpacking fontconfig (2.15.0-1ubuntu1) ...
154s Selecting previously unselected package libblas3:arm64.
154s Preparing to unpack .../05-libblas3_3.12.0-3_arm64.deb ...
154s Unpacking libblas3:arm64 (3.12.0-3) ...
154s Selecting previously unselected package libpixman-1-0:arm64.
154s Preparing to unpack .../06-libpixman-1-0_0.42.2-1_arm64.deb ...
154s Unpacking libpixman-1-0:arm64 (0.42.2-1) ...
154s Selecting previously unselected package libxcb-render0:arm64.
154s Preparing to unpack .../07-libxcb-render0_1.15-1_arm64.deb ...
154s Unpacking libxcb-render0:arm64 (1.15-1) ...
154s Selecting previously unselected package libxcb-shm0:arm64.
154s Preparing to unpack .../08-libxcb-shm0_1.15-1_arm64.deb ...
154s Unpacking libxcb-shm0:arm64 (1.15-1) ...
154s Selecting previously unselected package libxrender1:arm64.
154s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
154s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
154s Selecting previously unselected package libcairo2:arm64.
154s Preparing to unpack .../10-libcairo2_1.18.0-1_arm64.deb ...
154s Unpacking libcairo2:arm64 (1.18.0-1) ...
154s Selecting previously unselected package libdatrie1:arm64.
154s Preparing to unpack .../11-libdatrie1_0.2.13-3_arm64.deb ...
154s Unpacking libdatrie1:arm64 (0.2.13-3) ...
154s Selecting previously unselected package libdeflate0:arm64.
154s Preparing to unpack .../12-libdeflate0_1.19-1_arm64.deb ...
154s Unpacking libdeflate0:arm64 (1.19-1) ...
154s Selecting previously unselected package libgfortran5:arm64.
154s Preparing to unpack .../13-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
154s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
154s Selecting previously unselected package libgomp1:arm64.
154s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
154s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
155s Selecting previously unselected package libgraphite2-3:arm64.
155s Preparing to unpack .../15-libgraphite2-3_1.3.14-2_arm64.deb ...
155s Unpacking libgraphite2-3:arm64 (1.3.14-2) ...
155s Selecting previously unselected package libharfbuzz0b:arm64.
155s Preparing to unpack .../16-libharfbuzz0b_8.3.0-2_arm64.deb ...
155s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ...
155s Selecting previously unselected package x11-common.
155s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu2_all.deb ...
155s Unpacking x11-common (1:7.7+23ubuntu2) ...
155s Selecting previously unselected package libice6:arm64.
155s Preparing to unpack .../18-libice6_2%3a1.0.10-1build2_arm64.deb ...
155s Unpacking libice6:arm64 (2:1.0.10-1build2) ...
155s Selecting previously unselected package libjpeg-turbo8:arm64.
155s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
155s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
155s Selecting previously unselected package libjpeg8:arm64.
155s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ...
155s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
155s Selecting previously unselected package liblapack3:arm64.
155s Preparing to unpack .../21-liblapack3_3.12.0-3_arm64.deb ...
155s Unpacking liblapack3:arm64 (3.12.0-3) ...
155s Selecting previously unselected package liblerc4:arm64.
155s Preparing to unpack .../22-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
155s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
155s Selecting previously unselected package libthai-data.
156s Preparing to unpack .../23-libthai-data_0.1.29-2_all.deb ...
156s Unpacking libthai-data (0.1.29-2) ...
156s Selecting previously unselected package libthai0:arm64.
156s Preparing to unpack .../24-libthai0_0.1.29-2_arm64.deb ...
156s Unpacking libthai0:arm64 (0.1.29-2) ...
156s Selecting previously unselected package libpango-1.0-0:arm64.
156s Preparing to unpack .../25-libpango-1.0-0_1.51.0+ds-4_arm64.deb ...
156s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ...
156s Selecting previously unselected package libpangoft2-1.0-0:arm64.
156s Preparing to unpack .../26-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ...
156s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
156s Selecting previously unselected package libpangocairo-1.0-0:arm64.
156s Preparing to unpack .../27-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ...
156s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
156s Selecting previously unselected package libpaper1:arm64.
156s Preparing to unpack .../28-libpaper1_1.1.29_arm64.deb ...
156s Unpacking libpaper1:arm64 (1.1.29) ...
156s Selecting previously unselected package libpaper-utils.
156s Preparing to unpack .../29-libpaper-utils_1.1.29_arm64.deb ...
156s Unpacking libpaper-utils (1.1.29) ...
156s Selecting previously unselected package libsharpyuv0:arm64.
156s Preparing to unpack .../30-libsharpyuv0_1.3.2-0.4_arm64.deb ...
156s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ...
156s Selecting previously unselected package libsm6:arm64.
156s Preparing to unpack .../31-libsm6_2%3a1.2.3-1build2_arm64.deb ...
156s Unpacking libsm6:arm64 (2:1.2.3-1build2) ...
156s Selecting previously unselected package libtcl8.6:arm64.
156s Preparing to unpack .../32-libtcl8.6_8.6.13+dfsg-2_arm64.deb ...
156s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ...
156s Selecting previously unselected package libjbig0:arm64.
156s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu1_arm64.deb ...
156s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
156s Selecting previously unselected package libwebp7:arm64.
156s Preparing to unpack .../34-libwebp7_1.3.2-0.4_arm64.deb ...
156s Unpacking libwebp7:arm64 (1.3.2-0.4) ...
156s Selecting previously unselected package libtiff6:arm64.
156s Preparing to unpack .../35-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
156s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
156s Selecting previously unselected package libxft2:arm64.
156s Preparing to unpack .../36-libxft2_2.3.6-1_arm64.deb ...
156s Unpacking libxft2:arm64 (2.3.6-1) ...
156s Selecting previously unselected package libxss1:arm64.
156s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build2_arm64.deb ...
156s Unpacking libxss1:arm64 (1:1.2.3-1build2) ...
156s Selecting previously unselected package libtk8.6:arm64.
156s Preparing to unpack .../38-libtk8.6_8.6.13-2_arm64.deb ...
156s Unpacking libtk8.6:arm64 (8.6.13-2) ...
156s Selecting previously unselected package libxt6:arm64.
156s Preparing to unpack .../39-libxt6_1%3a1.2.1-1.1_arm64.deb ...
156s Unpacking libxt6:arm64 (1:1.2.1-1.1) ...
156s Selecting previously unselected package zip.
156s Preparing to unpack .../40-zip_3.0-13_arm64.deb ...
156s Unpacking zip (3.0-13) ...
157s Selecting previously unselected package unzip.
157s Preparing to unpack .../41-unzip_6.0-28ubuntu3_arm64.deb ...
157s Unpacking unzip (6.0-28ubuntu3) ...
157s Selecting previously unselected package xdg-utils.
157s Preparing to unpack .../42-xdg-utils_1.1.3-4.1ubuntu3_all.deb ...
157s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ...
157s Selecting previously unselected package r-base-core.
157s Preparing to unpack .../43-r-base-core_4.3.2-1build1_arm64.deb ...
157s Unpacking r-base-core (4.3.2-1build1) ...
157s Selecting previously unselected package r-cran-fingerprint.
157s Preparing to unpack .../44-r-cran-fingerprint_3.5.7-2build1_arm64.deb ...
157s Unpacking r-cran-fingerprint (3.5.7-2build1) ...
157s Selecting previously unselected package r-cran-runit.
157s Preparing to unpack .../45-r-cran-runit_0.4.32-3_all.deb ...
157s Unpacking r-cran-runit (0.4.32-3) ...
157s Selecting previously unselected package autopkgtest-satdep.
157s Preparing to unpack .../46-1-autopkgtest-satdep.deb ...
157s Unpacking autopkgtest-satdep (0) ...
157s Setting up libgraphite2-3:arm64 (1.3.14-2) ...
157s Setting up libpixman-1-0:arm64 (0.42.2-1) ...
157s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
157s Setting up libpaper1:arm64 (1.1.29) ...
158s 
158s Creating config file /etc/papersize with new version
158s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
158s Setting up libxrender1:arm64 (1:0.9.10-1.1) ...
158s Setting up libdatrie1:arm64 (0.2.13-3) ...
158s Setting up libxcb-render0:arm64 (1.15-1) ...
158s Setting up unzip (6.0-28ubuntu3) ...
158s Setting up x11-common (1:7.7+23ubuntu2) ...
159s Setting up libdeflate0:arm64 (1.19-1) ...
159s Setting up libxcb-shm0:arm64 (1.15-1) ...
159s Setting up libpaper-utils (1.1.29) ...
159s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ...
159s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
159s Setting up zip (3.0-13) ...
159s Setting up libblas3:arm64 (3.12.0-3) ...
159s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
159s Setting up fonts-dejavu-mono (2.37-8) ...
159s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ...
159s Setting up fonts-dejavu-core (2.37-8) ...
159s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
159s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ...
159s Setting up libwebp7:arm64 (1.3.2-0.4) ...
159s Setting up libharfbuzz0b:arm64 (8.3.0-2) ...
159s Setting up libthai-data (0.1.29-2) ...
159s Setting up libxss1:arm64 (1:1.2.3-1build2) ...
159s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
159s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
159s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
159s Setting up libice6:arm64 (2:1.0.10-1build2) ...
159s Setting up liblapack3:arm64 (3.12.0-3) ...
159s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
159s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
159s Setting up libthai0:arm64 (0.1.29-2) ...
159s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
159s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
159s Setting up libsm6:arm64 (2:1.2.3-1build2) ...
159s Setting up fontconfig (2.15.0-1ubuntu1) ...
161s Regenerating fonts cache... done.
161s Setting up libxft2:arm64 (2.3.6-1) ...
161s Setting up libtk8.6:arm64 (8.6.13-2) ...
161s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ...
161s Setting up libcairo2:arm64 (1.18.0-1) ...
161s Setting up libxt6:arm64 (1:1.2.1-1.1) ...
161s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
161s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
161s Setting up r-base-core (4.3.2-1build1) ...
162s 
162s Creating config file /etc/R/Renviron with new version
162s Setting up r-cran-fingerprint (3.5.7-2build1) ...
162s Setting up r-cran-runit (0.4.32-3) ...
162s Setting up autopkgtest-satdep (0) ...
162s Processing triggers for man-db (2.12.0-3) ...
163s Processing triggers for install-info (7.1-3) ...
163s Processing triggers for libc-bin (2.39-0ubuntu2) ...
168s (Reading database ... 76415 files and directories currently installed.)
168s Removing autopkgtest-satdep (0) ...
169s autopkgtest [18:33:26]: test run-unit-test: [-----------------------
169s BEGIN TEST doRUnit.R
170s 
170s R version 4.3.2 (2023-10-31) -- "Eye Holes"
170s Copyright (C) 2023 The R Foundation for Statistical Computing
170s Platform: aarch64-unknown-linux-gnu (64-bit)
170s 
170s R is free software and comes with ABSOLUTELY NO WARRANTY.
170s You are welcome to redistribute it under certain conditions.
170s Type 'license()' or 'licence()' for distribution details.
170s 
170s R is a collaborative project with many contributors.
170s Type 'contributors()' for more information and
170s 'citation()' on how to cite R or R packages in publications.
170s 
170s Type 'demo()' for some demos, 'help()' for on-line help, or
170s 'help.start()' for an HTML browser interface to help.
170s Type 'q()' to quit R.
170s 
170s > if(require("RUnit", quietly=TRUE)) {
170s +  
170s +   ## --- Setup ---
170s +  
170s +   pkg <- "fingerprint" # <-- Change to package name!
170s +   if(Sys.getenv("RCMDCHECK") == "FALSE") {
170s +     ## Path to unit tests for standalone running under Makefile (not R CMD check)
170s +     ## PKG/tests/../inst/unitTests
170s +     path <- file.path(getwd(), "..", "inst", "unitTests")
170s +   } else {
170s +     ## Path to unit tests for R CMD check
170s +     ## PKG.Rcheck/tests/../PKG/unitTests
170s +     path <- system.file(package=pkg, "unitTests")
170s +   }
170s +   cat("\nRunning unit tests\n")
170s +   print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
170s +  
170s +   library(package=pkg, character.only=TRUE)
170s +  
170s +   ## If desired, load the name space to allow testing of private functions
170s +   ## if (is.element(pkg, loadedNamespaces()))
170s +   ##     attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
170s +   ##
170s +   ## or simply call PKG:::myPrivateFunction() in tests
170s +  
170s +   ## --- Testing ---
170s +  
170s +   ## Define tests
170s +   testSuite <- defineTestSuite(name=paste(pkg, "fingerprint Unit Tests"),
170s +                                           dirs=path)
170s +   ## Run
170s +   tests <- runTestSuite(testSuite)
170s +  
170s +   ## Default report name
170s +   pathReport <- file.path(path, "report")
170s +  
170s +   ## Report to stdout and text files
170s +   cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
170s +   printTextProtocol(tests, showDetails=FALSE)
170s +   #printTextProtocol(tests, showDetails=FALSE,
170s +   #  fileName=paste(pathReport, "Summary.txt", sep=""))
170s +   #printTextProtocol(tests, showDetails=TRUE,
170s +   #                  fileName=paste(pathReport, ".txt", sep=""))
170s +  
170s +   ## Report to HTML file
170s +   #printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
170s +  
170s +   ## Return stop() to cause R CMD check stop in case of
170s +   ##  - failures i.e. FALSE to unit tests or
170s +   ##  - errors i.e. R errors
170s +   tmp <- getErrors(tests)
170s +   if(tmp$nFail > 0 | tmp$nErr > 0) {
170s +     stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
170s +                ", #R errors: ",  tmp$nErr, ")\n\n", sep=""))
170s +   }
170s + } else {
170s +   warning("cannot run unit tests -- package RUnit is not available")
170s + }
170s 
170s Running unit tests
170s $pkg
170s [1] "fingerprint"
170s 
170s $getwd
170s [1] "/tmp/autopkgtest.A0Qtwo/autopkgtest_tmp"
170s 
170s $pathToUnitTests
170s [1] "/usr/lib/R/site-library/fingerprint/unitTests"
170s 
170s 
170s 
170s Executing test function test.and1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.and2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.distance1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.distance2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.feature  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.feature.c  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.feature.dist1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.feature.dist2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.feature.fp  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.featvec.read  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.fold1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.fold2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.fp.balance  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.fp.sim.matrix  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.fp.to.matrix  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.fps.reader  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.new.fp  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.not  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.or1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.or2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.tversky.1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.tversky.2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.tversky.3  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.tversky.4  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.xor1  ...  done successfully.
170s 
170s 
170s 
170s Executing test function test.xor2  ...  done successfully.
170s 
170s 
170s 
170s Executing test function tester.getters.setters  ...  done successfully.
170s 
170s ------------------- UNIT TEST SUMMARY ---------------------
170s 
170s RUNIT TEST PROTOCOL -- Sat Mar 16 18:33:27 2024 
170s *********************************************** 
170s Number of test functions: 27 
170s Number of errors: 0 
170s Number of failures: 0 
170s 
170s  
170s 1 Test Suite : 
170s fingerprint fingerprint Unit Tests - 27 test functions, 0 errors, 0 failures
170s Warning messages:
170s 1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
170s   RNGkind: Marsaglia-Multicarry has poor statistical properties
170s 2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
170s   RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
170s > 
171s autopkgtest [18:33:28]: test run-unit-test: -----------------------]
172s run-unit-test        PASS
172s autopkgtest [18:33:29]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
172s autopkgtest [18:33:29]: test pkg-r-autopkgtest: preparing testbed
173s Reading package lists...
174s Building dependency tree...
174s Reading state information...
174s Starting pkgProblemResolver with broken count: 0
174s Starting 2 pkgProblemResolver with broken count: 0
174s Done
175s The following additional packages will be installed:
175s   build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu
175s   dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
175s   gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13
175s   gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
175s   libasan8 libatomic1 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0
175s   libcrypt-dev libgcc-13-dev libgfortran-13-dev libhwasan0 libicu-dev libisl23
175s   libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0
175s   liblzma-dev libmpc3 libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0
175s   libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev
175s   libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config
175s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev
175s Suggested packages:
175s   cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib
175s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
175s   gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev
175s   liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc
175s   libstdc++-13-doc texlive-base texlive-latex-base texlive-plain-generic
175s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
175s   texlive-latex-recommended texlive-latex-extra texinfo
175s Recommended packages:
175s   bzip2-doc manpages manpages-dev libc-devtools libpng-tools
175s The following NEW packages will be installed:
175s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu
175s   cpp-aarch64-linux-gnu dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu
175s   g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu
175s   gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu
175s   gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev
175s   libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev
175s   libgfortran-13-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
175s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
175s   libncurses-dev libnsl-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
175s   libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev
175s   libtirpc-dev libtsan2 libubsan1 linux-libc-dev pkg-config pkg-r-autopkgtest
175s   pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev
175s 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded.
175s Need to get 92.9 MB/92.9 MB of archives.
175s After this operation, 343 MB of additional disk space will be used.
175s Get:1 /tmp/autopkgtest.A0Qtwo/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [732 B]
175s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB]
175s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB]
175s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB]
175s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB]
176s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB]
176s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB]
176s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB]
176s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB]
176s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB]
176s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB]
177s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B]
177s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B]
177s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB]
177s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB]
177s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB]
177s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
177s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB]
177s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB]
177s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB]
177s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB]
177s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB]
177s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB]
178s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB]
178s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB]
178s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B]
178s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B]
178s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB]
178s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB]
179s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB]
179s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B]
179s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B]
179s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
179s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
179s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB]
179s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB]
179s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB]
179s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B]
179s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B]
179s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB]
179s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB]
179s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB]
179s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB]
179s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB]
179s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
179s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
179s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB]
179s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB]
179s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB]
179s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB]
179s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B]
179s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB]
179s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB]
179s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB]
179s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB]
179s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB]
179s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB]
179s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB]
179s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B]
179s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB]
179s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B]
179s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
181s Fetched 92.9 MB in 5s (20.3 MB/s)
181s Selecting previously unselected package libc-dev-bin.
181s (Reading database ... 
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181s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu2_arm64.deb ...
181s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
181s Selecting previously unselected package linux-libc-dev:arm64.
181s Preparing to unpack .../01-linux-libc-dev_6.8.0-11.11_arm64.deb ...
181s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ...
181s Selecting previously unselected package libcrypt-dev:arm64.
181s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.36-4_arm64.deb ...
181s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ...
181s Selecting previously unselected package libtirpc-dev:arm64.
181s Preparing to unpack .../03-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ...
181s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ...
181s Selecting previously unselected package libnsl-dev:arm64.
181s Preparing to unpack .../04-libnsl-dev_1.3.0-3_arm64.deb ...
181s Unpacking libnsl-dev:arm64 (1.3.0-3) ...
181s Selecting previously unselected package rpcsvc-proto.
181s Preparing to unpack .../05-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ...
181s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
181s Selecting previously unselected package libc6-dev:arm64.
181s Preparing to unpack .../06-libc6-dev_2.39-0ubuntu2_arm64.deb ...
181s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ...
181s Selecting previously unselected package libisl23:arm64.
181s Preparing to unpack .../07-libisl23_0.26-3_arm64.deb ...
181s Unpacking libisl23:arm64 (0.26-3) ...
181s Selecting previously unselected package libmpc3:arm64.
181s Preparing to unpack .../08-libmpc3_1.3.1-1_arm64.deb ...
181s Unpacking libmpc3:arm64 (1.3.1-1) ...
181s Selecting previously unselected package cpp-13-aarch64-linux-gnu.
181s Preparing to unpack .../09-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
181s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
182s Selecting previously unselected package cpp-13.
182s Preparing to unpack .../10-cpp-13_13.2.0-17ubuntu2_arm64.deb ...
182s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
182s Selecting previously unselected package cpp-aarch64-linux-gnu.
182s Preparing to unpack .../11-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
182s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
182s Selecting previously unselected package cpp.
182s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ...
182s Unpacking cpp (4:13.2.0-7ubuntu1) ...
182s Selecting previously unselected package libcc1-0:arm64.
182s Preparing to unpack .../13-libcc1-0_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libitm1:arm64.
182s Preparing to unpack .../14-libitm1_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libatomic1:arm64.
182s Preparing to unpack .../15-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libasan8:arm64.
182s Preparing to unpack .../16-libasan8_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package liblsan0:arm64.
182s Preparing to unpack .../17-liblsan0_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libtsan2:arm64.
182s Preparing to unpack .../18-libtsan2_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libubsan1:arm64.
182s Preparing to unpack .../19-libubsan1_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libhwasan0:arm64.
182s Preparing to unpack .../20-libhwasan0_14-20240303-1ubuntu1_arm64.deb ...
182s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ...
182s Selecting previously unselected package libgcc-13-dev:arm64.
182s Preparing to unpack .../21-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ...
182s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
182s Selecting previously unselected package gcc-13-aarch64-linux-gnu.
182s Preparing to unpack .../22-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
182s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
183s Selecting previously unselected package gcc-13.
183s Preparing to unpack .../23-gcc-13_13.2.0-17ubuntu2_arm64.deb ...
183s Unpacking gcc-13 (13.2.0-17ubuntu2) ...
183s Selecting previously unselected package gcc-aarch64-linux-gnu.
183s Preparing to unpack .../24-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
183s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
183s Selecting previously unselected package gcc.
183s Preparing to unpack .../25-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ...
183s Unpacking gcc (4:13.2.0-7ubuntu1) ...
183s Selecting previously unselected package libstdc++-13-dev:arm64.
183s Preparing to unpack .../26-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ...
183s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
183s Selecting previously unselected package g++-13-aarch64-linux-gnu.
183s Preparing to unpack .../27-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
183s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
184s Selecting previously unselected package g++-13.
184s Preparing to unpack .../28-g++-13_13.2.0-17ubuntu2_arm64.deb ...
184s Unpacking g++-13 (13.2.0-17ubuntu2) ...
184s Selecting previously unselected package g++-aarch64-linux-gnu.
184s Preparing to unpack .../29-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
184s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
184s Selecting previously unselected package g++.
184s Preparing to unpack .../30-g++_4%3a13.2.0-7ubuntu1_arm64.deb ...
184s Unpacking g++ (4:13.2.0-7ubuntu1) ...
184s Selecting previously unselected package build-essential.
184s Preparing to unpack .../31-build-essential_12.10ubuntu1_arm64.deb ...
184s Unpacking build-essential (12.10ubuntu1) ...
184s Selecting previously unselected package dctrl-tools.
184s Preparing to unpack .../32-dctrl-tools_2.24-3build2_arm64.deb ...
184s Unpacking dctrl-tools (2.24-3build2) ...
184s Selecting previously unselected package libgfortran-13-dev:arm64.
184s Preparing to unpack .../33-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ...
184s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ...
184s Selecting previously unselected package gfortran-13-aarch64-linux-gnu.
184s Preparing to unpack .../34-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
184s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
185s Selecting previously unselected package gfortran-13.
185s Preparing to unpack .../35-gfortran-13_13.2.0-17ubuntu2_arm64.deb ...
185s Unpacking gfortran-13 (13.2.0-17ubuntu2) ...
185s Selecting previously unselected package gfortran-aarch64-linux-gnu.
185s Preparing to unpack .../36-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
185s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
185s Selecting previously unselected package gfortran.
185s Preparing to unpack .../37-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ...
185s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
185s Selecting previously unselected package icu-devtools.
185s Preparing to unpack .../38-icu-devtools_74.2-1ubuntu1_arm64.deb ...
185s Unpacking icu-devtools (74.2-1ubuntu1) ...
185s Selecting previously unselected package libblas-dev:arm64.
185s Preparing to unpack .../39-libblas-dev_3.12.0-3_arm64.deb ...
185s Unpacking libblas-dev:arm64 (3.12.0-3) ...
185s Selecting previously unselected package libbz2-dev:arm64.
185s Preparing to unpack .../40-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ...
185s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ...
185s Selecting previously unselected package libicu-dev:arm64.
185s Preparing to unpack .../41-libicu-dev_74.2-1ubuntu1_arm64.deb ...
185s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ...
185s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
186s Preparing to unpack .../42-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ...
186s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
186s Selecting previously unselected package libjpeg8-dev:arm64.
186s Preparing to unpack .../43-libjpeg8-dev_8c-2ubuntu11_arm64.deb ...
186s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ...
186s Selecting previously unselected package libjpeg-dev:arm64.
186s Preparing to unpack .../44-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
186s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
186s Selecting previously unselected package liblapack-dev:arm64.
186s Preparing to unpack .../45-liblapack-dev_3.12.0-3_arm64.deb ...
186s Unpacking liblapack-dev:arm64 (3.12.0-3) ...
186s Selecting previously unselected package libncurses-dev:arm64.
186s Preparing to unpack .../46-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ...
186s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ...
186s Selecting previously unselected package libpcre2-16-0:arm64.
187s Preparing to unpack .../47-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ...
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187s Selecting previously unselected package libpcre2-32-0:arm64.
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187s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
187s Selecting previously unselected package libpcre2-posix3:arm64.
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187s Selecting previously unselected package libpcre2-dev:arm64.
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187s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ...
187s Selecting previously unselected package libpkgconf3:arm64.
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187s Unpacking libpkgconf3:arm64 (1.8.1-2) ...
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187s Selecting previously unselected package libpng-dev:arm64.
187s Preparing to unpack .../53-libpng-dev_1.6.43-1_arm64.deb ...
187s Unpacking libpng-dev:arm64 (1.6.43-1) ...
187s Selecting previously unselected package libreadline-dev:arm64.
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188s Selecting previously unselected package pkgconf:arm64.
188s Preparing to unpack .../56-pkgconf_1.8.1-2_arm64.deb ...
188s Unpacking pkgconf:arm64 (1.8.1-2) ...
188s Selecting previously unselected package pkg-config:arm64.
188s Preparing to unpack .../57-pkg-config_1.8.1-2_arm64.deb ...
188s Unpacking pkg-config:arm64 (1.8.1-2) ...
188s Selecting previously unselected package liblzma-dev:arm64.
188s Preparing to unpack .../58-liblzma-dev_5.4.5-0.3_arm64.deb ...
188s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ...
188s Selecting previously unselected package r-base-dev.
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188s Unpacking r-base-dev (4.3.2-1build1) ...
188s Selecting previously unselected package pkg-r-autopkgtest.
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188s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
188s Selecting previously unselected package autopkgtest-satdep.
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188s Unpacking autopkgtest-satdep (0) ...
188s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ...
188s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ...
188s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
188s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ...
188s Setting up libpkgconf3:arm64 (1.8.1-2) ...
188s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
188s Setting up libmpc3:arm64 (1.3.1-1) ...
188s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ...
188s Setting up icu-devtools (74.2-1ubuntu1) ...
188s Setting up pkgconf-bin (1.8.1-2) ...
188s Setting up liblzma-dev:arm64 (5.4.5-0.3) ...
188s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ...
188s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ...
188s Setting up libnsl-dev:arm64 (1.3.0-3) ...
188s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ...
188s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ...
188s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ...
188s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ...
188s Setting up libisl23:arm64 (0.26-3) ...
188s Setting up libc-dev-bin (2.39-0ubuntu2) ...
188s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ...
188s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ...
188s Setting up libblas-dev:arm64 (3.12.0-3) ...
188s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
188s Setting up dctrl-tools (2.24-3build2) ...
188s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ...
188s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
188s Setting up pkgconf:arm64 (1.8.1-2) ...
188s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
188s Setting up liblapack-dev:arm64 (3.12.0-3) ...
188s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
188s Setting up pkg-config:arm64 (1.8.1-2) ...
188s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
188s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ...
188s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ...
188s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ...
188s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
188s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ...
188s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
188s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ...
188s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ...
188s Setting up cpp-13 (13.2.0-17ubuntu2) ...
188s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
188s Setting up libreadline-dev:arm64 (8.2-3) ...
188s Setting up gcc-13 (13.2.0-17ubuntu2) ...
188s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ...
188s Setting up cpp (4:13.2.0-7ubuntu1) ...
188s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
188s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
188s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
188s Setting up g++-13 (13.2.0-17ubuntu2) ...
188s Setting up libpng-dev:arm64 (1.6.43-1) ...
188s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
188s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
188s Setting up gcc (4:13.2.0-7ubuntu1) ...
188s Setting up gfortran-13 (13.2.0-17ubuntu2) ...
188s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
188s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
188s Setting up gfortran (4:13.2.0-7ubuntu1) ...
188s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
188s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
188s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
188s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
188s Setting up g++ (4:13.2.0-7ubuntu1) ...
188s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
188s Setting up build-essential (12.10ubuntu1) ...
188s Setting up r-base-dev (4.3.2-1build1) ...
188s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
188s Setting up autopkgtest-satdep (0) ...
188s Processing triggers for man-db (2.12.0-3) ...
189s Processing triggers for install-info (7.1-3) ...
190s Processing triggers for libc-bin (2.39-0ubuntu2) ...
193s (Reading database ... 79974 files and directories currently installed.)
193s Removing autopkgtest-satdep (0) ...
194s autopkgtest [18:33:51]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
194s autopkgtest [18:33:51]: test pkg-r-autopkgtest: [-----------------------
194s Test: Try to load the R library fingerprint
194s 
194s R version 4.3.2 (2023-10-31) -- "Eye Holes"
194s Copyright (C) 2023 The R Foundation for Statistical Computing
194s Platform: aarch64-unknown-linux-gnu (64-bit)
194s 
194s R is free software and comes with ABSOLUTELY NO WARRANTY.
194s You are welcome to redistribute it under certain conditions.
194s Type 'license()' or 'licence()' for distribution details.
194s 
194s R is a collaborative project with many contributors.
194s Type 'contributors()' for more information and
194s 'citation()' on how to cite R or R packages in publications.
194s 
194s Type 'demo()' for some demos, 'help()' for on-line help, or
194s 'help.start()' for an HTML browser interface to help.
194s Type 'q()' to quit R.
194s 
195s > library('fingerprint')
195s > 
195s > 
195s Other tests are currently unsupported!
195s They will be progressively added.
195s autopkgtest [18:33:52]: test pkg-r-autopkgtest: -----------------------]
195s pkg-r-autopkgtest    PASS
195s autopkgtest [18:33:52]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
196s autopkgtest [18:33:53]: @@@@@@@@@@@@@@@@@@@@ summary
196s run-unit-test        PASS
196s pkg-r-autopkgtest    PASS
207s Creating nova instance adt-noble-arm64-r-cran-fingerprint-20240316-183037-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...