0s autopkgtest [17:49:44]: starting date and time: 2024-03-16 17:49:44+0000 0s autopkgtest [17:49:44]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:49:44]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.izd8y65a/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-cran-alakazam --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-12.secgroup --name adt-noble-arm64-r-cran-alakazam-20240316-174944-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 114s autopkgtest [17:51:38]: testbed dpkg architecture: arm64 114s autopkgtest [17:51:38]: testbed apt version: 2.7.12 114s autopkgtest [17:51:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 114s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 115s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 115s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 115s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 115s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 115s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 115s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 115s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 115s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 115s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 115s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 115s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 115s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 117s Fetched 9060 kB in 2s (5401 kB/s) 117s Reading package lists... 120s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s Calculating upgrade... 121s The following packages will be REMOVED: 121s libglib2.0-0 libssl3 121s The following NEW packages will be installed: 121s libglib2.0-0t64 libssl3t64 xdg-user-dirs 121s The following packages have been kept back: 121s curl 121s The following packages will be upgraded: 121s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 121s ubuntu-minimal ubuntu-standard 121s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 121s Need to get 4613 kB of archives. 121s After this operation, 211 kB of additional disk space will be used. 121s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 121s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 121s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 121s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 121s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 121s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 121s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 121s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 121s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 121s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 122s Fetched 4613 kB in 1s (6746 kB/s) 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 122s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 122s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 122s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 122s udisks2 depends on libglib2.0-0 (>= 2.77.0). 122s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 122s python3-gi depends on libglib2.0-0 (>= 2.77.0). 122s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 122s netplan.io depends on libglib2.0-0 (>= 2.70.0). 122s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 122s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 122s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 122s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 122s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 122s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 122s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 122s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 122s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 122s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 122s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 122s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 122s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 122s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 122s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 122s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 122s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 122s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 122s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 122s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 122s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 122s fwupd depends on libglib2.0-0 (>= 2.79.0). 122s bolt depends on libglib2.0-0 (>= 2.56.0). 122s 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 122s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 123s Selecting previously unselected package libglib2.0-0t64:arm64. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 123s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 123s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 123s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 123s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 123s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 123s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 123s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 123s wget depends on libssl3 (>= 3.0.0). 123s u-boot-tools depends on libssl3 (>= 3.0.0). 123s tnftp depends on libssl3 (>= 3.0.0). 123s tcpdump depends on libssl3 (>= 3.0.0). 123s systemd-resolved depends on libssl3 (>= 3.0.0). 123s systemd depends on libssl3 (>= 3.0.0). 123s sudo depends on libssl3 (>= 3.0.0). 123s sbsigntool depends on libssl3 (>= 3.0.0). 123s rsync depends on libssl3 (>= 3.0.0). 123s python3-cryptography depends on libssl3 (>= 3.0.0). 123s openssh-server depends on libssl3 (>= 3.0.10). 123s openssh-client depends on libssl3 (>= 3.0.10). 123s mtd-utils depends on libssl3 (>= 3.0.0). 123s mokutil depends on libssl3 (>= 3.0.0). 123s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 123s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 123s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 123s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 123s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 123s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 123s libnvme1 depends on libssl3 (>= 3.0.0). 123s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 123s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 123s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 123s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 123s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 123s kmod depends on libssl3 (>= 3.0.0). 123s dhcpcd-base depends on libssl3 (>= 3.0.0). 123s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 123s 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 123s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 123s Selecting previously unselected package libssl3t64:arm64. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 123s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 123s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 123s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 123s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 123s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 123s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 123s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 123s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 123s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 123s Unpacking ubuntu-minimal (1.536) over (1.535) ... 123s Selecting previously unselected package xdg-user-dirs. 123s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 123s Unpacking xdg-user-dirs (0.18-1) ... 123s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 123s Unpacking ubuntu-standard (1.536) over (1.535) ... 123s Setting up ubuntu-minimal (1.536) ... 123s Setting up xdg-user-dirs (0.18-1) ... 123s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 123s Setting up libtirpc-common (1.3.4+ds-1.1) ... 123s Setting up ubuntu-standard (1.536) ... 123s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 123s No schema files found: doing nothing. 123s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 123s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 123s Setting up openssl (3.0.13-0ubuntu1) ... 123s Setting up readline-common (8.2-3.1) ... 123s Processing triggers for man-db (2.12.0-3) ... 124s Processing triggers for install-info (7.1-3) ... 124s Processing triggers for libc-bin (2.39-0ubuntu2) ... 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 127s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 127s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 127s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 127s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 128s Reading package lists... 128s Reading package lists... 129s Building dependency tree... 129s Reading state information... 129s Calculating upgrade... 129s The following packages have been kept back: 129s curl 129s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 130s Reading package lists... 130s Building dependency tree... 130s Reading state information... 130s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 133s autopkgtest [17:51:57]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 133s autopkgtest [17:51:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-alakazam 136s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-alakazam 1.3.0-1 (dsc) [2387 B] 136s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-alakazam 1.3.0-1 (tar) [2076 kB] 136s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-alakazam 1.3.0-1 (diff) [14.2 kB] 136s gpgv: Signature made Thu Oct 12 13:40:03 2023 UTC 136s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 136s gpgv: issuer "tille@debian.org" 136s gpgv: Can't check signature: No public key 136s dpkg-source: warning: cannot verify inline signature for ./r-cran-alakazam_1.3.0-1.dsc: no acceptable signature found 136s autopkgtest [17:52:00]: testing package r-cran-alakazam version 1.3.0-1 136s autopkgtest [17:52:00]: build not needed 138s autopkgtest [17:52:02]: test pkg-r-autopkgtest: preparing testbed 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 140s Starting pkgProblemResolver with broken count: 0 140s Starting 2 pkgProblemResolver with broken count: 0 140s Done 140s The following additional packages will be installed: 140s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 140s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 140s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 140s fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 140s gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 140s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 140s javascript-common libasan8 libatomic1 libblas-dev libblas3 libboost-dev 140s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 140s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 140s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 140s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 140s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 140s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 140s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 140s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 140s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 140s liblapack-dev liblapack3 liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 140s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 140s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 140s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 140s libpng16-16t64 libpsl5t64 libreadline-dev libreadline8t64 libsharpyuv0 140s libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6 140s libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 140s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 140s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 140s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 140s r-base-core r-base-dev r-bioc-biobase r-bioc-biocgenerics 140s r-bioc-biocparallel r-bioc-biostrings r-bioc-delayedarray 140s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 140s r-bioc-genomicranges r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib 140s r-bioc-rsamtools r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 140s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 140s r-cran-ade4 r-cran-airr r-cran-alakazam r-cran-ape r-cran-base64enc 140s r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib 140s r-cran-cachem r-cran-callr r-cran-cli r-cran-clipr r-cran-codetools 140s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-desc 140s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate 140s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-formatr 140s r-cran-fs r-cran-futile.logger r-cran-futile.options r-cran-generics 140s r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr r-cran-hms 140s r-cran-htmltools r-cran-httpuv r-cran-igraph r-cran-isoband r-cran-jquerylib 140s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 140s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 140s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 140s r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pixmap r-cran-pkgbuild 140s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-praise 140s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 140s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 140s r-cran-rcpparmadillo r-cran-rcurl r-cran-readr r-cran-rematch2 r-cran-rlang 140s r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-scales r-cran-segmented 140s r-cran-seqinr r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-sp 140s r-cran-stringi r-cran-stringr r-cran-testthat r-cran-tibble r-cran-tidyr 140s r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-vctrs 140s r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun 140s r-cran-xtable r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip 140s zlib1g-dev 140s Suggested packages: 140s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 140s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 140s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 140s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 140s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 140s libboost-context1.83-dev libboost-contract1.83-dev 140s libboost-coroutine1.83-dev libboost-date-time1.83-dev 140s libboost-exception1.83-dev libboost-fiber1.83-dev 140s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 140s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 140s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 140s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 140s libboost-numpy1.83-dev libboost-program-options1.83-dev 140s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 140s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 140s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 140s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 140s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 140s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 140s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 140s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 140s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 140s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 140s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 140s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 140s texlive-extra-utils texinfo r-bioc-all r-cran-runit r-bioc-biocstyle 140s r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate 140s r-cran-foreach r-cran-bbmisc r-cran-doparallel r-bioc-variantannotation 140s r-bioc-shortread r-cran-batchtools r-cran-data.table r-bioc-bsgenome 140s r-bioc-genomicfeatures r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 140s r-bioc-delayedmatrixstats r-cran-r.utils r-bioc-rtracklayer r-bioc-edger 140s r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq r-bioc-keggrest 140s r-bioc-sparsematrixstats r-bioc-graph r-bioc-rhdf5 r-cran-adegraphics 140s r-cran-adephylo r-cran-deldir r-cran-spdep r-cran-waveslim r-cran-iterators 140s r-cran-gee r-cran-expm clustalw muscle phyml t-coffee r-cran-roxygen2 140s r-cran-ff r-cran-covr r-cran-spelling r-cran-rstudioapi r-cran-kernsmooth 140s r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-png 140s r-cran-jpeg r-cran-viridis r-cran-markdown r-cran-lubridate r-cran-magick 140s r-cran-sf r-cran-getopt r-cran-httr r-cran-dbi r-cran-formattable 140s r-cran-nanotime r-cran-palmerpenguins r-cran-survival r-cran-units 140s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-bench 140s r-cran-blob r-cran-here r-cran-plm r-cran-zoo 140s Recommended packages: 140s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 140s r-recommended r-doc-html r-cran-phangorn r-cran-covr r-cran-curl 140s r-cran-thematic r-cran-cliapp r-cran-mockery r-cran-htmlwidgets 140s r-cran-rstudioapi r-cran-whoami r-cran-xml2 r-cran-bench r-cran-decor 140s r-cran-lobstr r-cran-gh r-cran-spelling r-cran-broom r-cran-dbi 140s r-cran-dbplyr r-cran-rmysql r-cran-rpostgresql r-cran-rsqlite 140s r-cran-unitizer r-cran-rsvg r-cran-testit r-cran-survival r-cran-hexbin 140s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 140s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 140s r-cran-vdiffr r-cran-cairo r-cran-markdown r-bioc-graph r-cran-rgl 140s r-cran-httr r-cran-r.rsp r-cran-gridsvg r-cran-jpeg r-cran-magick r-cran-png 140s r-cran-reticulate r-cran-tikzdevice r-cran-webshot node-highlight.js 140s r-cran-lintr r-cran-tidyverse r-cran-r.devices r-cran-lubridate 140s r-cran-mathjaxr r-cran-mockr r-cran-remotes r-cran-webfakes r-cran-future 140s r-cran-pingr r-cran-xml r-cran-usethis r-cran-dygraphs r-cran-rsconnect 140s r-cran-downlit r-cran-dichromat r-cran-gstat r-cran-deldir r-cran-terra 140s r-cran-raster r-cran-data.table r-cran-formattable r-cran-pkgdown 140s r-cran-zeallot r-cran-renv r-cran-runit libfile-mimeinfo-perl 140s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 140s The following packages will be REMOVED: 140s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 140s The following NEW packages will be installed: 140s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 140s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 140s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 140s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 140s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 140s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 140s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 140s libatomic1 libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev 140s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 140s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 140s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 140s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 140s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 140s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 140s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 140s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 140s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 140s liblapack-dev liblapack3 liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 140s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 140s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 140s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 140s libpng16-16t64 libpsl5t64 libreadline-dev libreadline8t64 libsharpyuv0 140s libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6 140s libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 140s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 140s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 140s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 140s r-base-core r-base-dev r-bioc-biobase r-bioc-biocgenerics 140s r-bioc-biocparallel r-bioc-biostrings r-bioc-delayedarray 140s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 140s r-bioc-genomicranges r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib 140s r-bioc-rsamtools r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 140s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 140s r-cran-ade4 r-cran-airr r-cran-alakazam r-cran-ape r-cran-base64enc 140s r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib 140s r-cran-cachem r-cran-callr r-cran-cli r-cran-clipr r-cran-codetools 140s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-desc 140s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate 140s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-formatr 140s r-cran-fs r-cran-futile.logger r-cran-futile.options r-cran-generics 140s r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr r-cran-hms 140s r-cran-htmltools r-cran-httpuv r-cran-igraph r-cran-isoband r-cran-jquerylib 140s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 140s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 140s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 140s r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pixmap r-cran-pkgbuild 140s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-praise 140s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 140s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 140s r-cran-rcpparmadillo r-cran-rcurl r-cran-readr r-cran-rematch2 r-cran-rlang 140s r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-scales r-cran-segmented 140s r-cran-seqinr r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-sp 140s r-cran-stringi r-cran-stringr r-cran-testthat r-cran-tibble r-cran-tidyr 140s r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-vctrs 140s r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun 140s r-cran-xtable r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip 140s zlib1g-dev 140s The following packages will be upgraded: 140s curl 140s 1 upgraded, 272 newly installed, 5 to remove and 0 not upgraded. 140s Need to get 324 MB/324 MB of archives. 140s After this operation, 1100 MB of additional disk space will be used. 140s Get:1 /tmp/autopkgtest.5BTtpj/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [744 B] 141s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 141s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 141s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 141s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 141s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 141s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 141s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 141s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 141s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 141s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 141s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 141s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 141s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 141s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 141s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 141s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 141s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 141s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 141s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 141s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 141s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 141s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 141s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 141s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 141s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 141s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 142s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 142s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 142s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 142s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 142s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 142s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 142s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 142s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 142s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 143s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 143s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 143s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 143s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 143s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 143s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 143s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 143s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 143s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 143s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 143s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 143s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 143s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 143s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 143s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 143s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 143s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 143s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 143s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 143s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 143s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 143s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 143s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 143s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 143s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 143s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 143s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 143s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 143s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 143s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 143s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 143s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 143s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 143s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 143s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 143s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 143s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 143s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 144s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 144s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 144s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 144s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 144s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 144s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 144s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 144s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 144s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 144s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 144s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 144s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 144s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 144s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 144s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 144s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 144s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 144s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 144s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 144s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 144s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 144s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 144s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 144s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 144s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 144s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 144s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 144s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 144s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 144s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 144s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 144s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 144s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 144s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 144s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 145s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 145s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 145s Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 145s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 145s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 145s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 145s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 145s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 145s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 145s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 145s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 145s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 145s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 146s Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 146s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 146s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 146s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 146s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 148s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 148s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 148s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 148s Get:131 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 148s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 148s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 148s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 149s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 149s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 149s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 149s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 149s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 149s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 149s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 149s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 149s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 149s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 149s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 149s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 149s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 149s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 149s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 149s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 149s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 149s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 149s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 149s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 149s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 149s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 149s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 149s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 149s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 149s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 149s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 150s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 150s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 150s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 150s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 150s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 150s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 150s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 150s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 150s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 150s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 150s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 150s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 151s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 151s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 151s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pixmap all 0.4-12-1 [201 kB] 151s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sp arm64 1:2.1-2+dfsg-1 [1448 kB] 151s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 151s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 151s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpparmadillo arm64 0.12.8.0.0-1 [859 kB] 151s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ade4 arm64 1.7-22-1 [5324 kB] 151s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 151s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 151s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-clipr all 0.8.0-1 [53.5 kB] 151s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 151s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 151s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 151s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 151s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 151s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 151s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 151s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 151s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 151s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 151s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 151s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 151s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 151s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 151s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 151s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 151s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 151s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 151s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 151s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vroom arm64 1.6.5-1 [832 kB] 152s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-readr arm64 2.1.5-1 [756 kB] 152s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 152s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 152s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-airr all 1.5.0+dfsg-1 [329 kB] 152s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 152s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 152s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB] 152s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 152s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-farver arm64 2.1.1-1 [1336 kB] 152s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 152s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 152s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-munsell all 0.5.0-2build1 [208 kB] 152s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 152s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 153s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 153s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 153s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 153s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ape arm64 5.7-1-1 [2879 kB] 153s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 153s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 153s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-igraph arm64 1.6.0-1 [4329 kB] 153s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-segmented all 2.0-3-1 [1252 kB] 153s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-seqinr arm64 4.2-36-1 [4013 kB] 153s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 153s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 153s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 153s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-alakazam arm64 1.3.0-1 [2407 kB] 153s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 153s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 153s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 153s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 153s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 153s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 153s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 153s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 153s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 153s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 153s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 153s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 153s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 153s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 153s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 153s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 153s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 153s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 153s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 153s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 154s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 154s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 154s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 154s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 154s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 154s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 154s Get:258 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 154s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 154s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 154s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 154s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 154s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 154s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 154s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 154s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 154s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 154s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 154s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 154s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 154s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 154s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 154s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 155s Preconfiguring packages ... 155s Fetched 324 MB in 13s (24.0 MB/s) 155s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 155s wget depends on libpsl5 (>= 0.16.0). 155s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 155s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 155s 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 156s Removing libpsl5:arm64 (0.21.2-1build1) ... 156s Selecting previously unselected package libpsl5t64:arm64. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 156s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 156s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 156s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 156s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 156s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 156s Selecting previously unselected package libcurl4t64:arm64. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 156s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 156s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 156s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 156s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 156s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 156s 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 156s Removing libpng16-16:arm64 (1.6.43-1) ... 156s Selecting previously unselected package libpng16-16t64:arm64. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 156s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 156s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 156s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 156s parted depends on libreadline8 (>= 6.0). 156s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 156s gpgsm depends on libreadline8 (>= 6.0). 156s gpgconf depends on libreadline8 (>= 6.0). 156s gpg depends on libreadline8 (>= 6.0). 156s gawk depends on libreadline8 (>= 6.0). 156s fdisk depends on libreadline8 (>= 6.0). 156s 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 156s Removing libreadline8:arm64 (8.2-3) ... 156s Selecting previously unselected package libreadline8t64:arm64. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 156s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 156s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 156s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 156s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 156s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 156s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 156s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 156s lsof depends on libtirpc3 (>= 1.0.2). 156s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 156s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 156s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 156s iproute2 depends on libtirpc3 (>= 1.0.2). 156s 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 156s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 156s Selecting previously unselected package libtirpc3t64:arm64. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 156s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 156s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 156s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 156s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 156s Selecting previously unselected package libc-dev-bin. 156s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 156s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 156s Selecting previously unselected package linux-libc-dev:arm64. 157s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 157s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 157s Selecting previously unselected package libcrypt-dev:arm64. 157s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 157s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 157s Selecting previously unselected package libtirpc-dev:arm64. 157s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 157s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 157s Selecting previously unselected package libnsl-dev:arm64. 157s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 157s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 157s Selecting previously unselected package rpcsvc-proto. 157s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 157s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 157s Selecting previously unselected package libc6-dev:arm64. 157s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 157s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 157s Selecting previously unselected package libisl23:arm64. 157s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 157s Unpacking libisl23:arm64 (0.26-3) ... 157s Selecting previously unselected package libmpc3:arm64. 157s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 157s Unpacking libmpc3:arm64 (1.3.1-1) ... 157s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 157s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 157s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 158s Selecting previously unselected package cpp-13. 158s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 158s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 158s Selecting previously unselected package cpp-aarch64-linux-gnu. 158s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 158s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 158s Selecting previously unselected package cpp. 158s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 158s Unpacking cpp (4:13.2.0-7ubuntu1) ... 158s Selecting previously unselected package libcc1-0:arm64. 158s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libgomp1:arm64. 158s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libitm1:arm64. 158s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libatomic1:arm64. 158s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libasan8:arm64. 158s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package liblsan0:arm64. 158s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libtsan2:arm64. 158s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libubsan1:arm64. 158s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libhwasan0:arm64. 158s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 158s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 158s Selecting previously unselected package libgcc-13-dev:arm64. 158s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 158s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 158s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 158s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 158s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package gcc-13. 159s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 159s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package gcc-aarch64-linux-gnu. 159s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 159s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 159s Selecting previously unselected package gcc. 159s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 159s Unpacking gcc (4:13.2.0-7ubuntu1) ... 159s Selecting previously unselected package libstdc++-13-dev:arm64. 159s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 159s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package g++-13-aarch64-linux-gnu. 159s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 159s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package g++-13. 159s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 159s Unpacking g++-13 (13.2.0-17ubuntu2) ... 159s Selecting previously unselected package g++-aarch64-linux-gnu. 159s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 159s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 159s Selecting previously unselected package g++. 159s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 159s Unpacking g++ (4:13.2.0-7ubuntu1) ... 159s Selecting previously unselected package build-essential. 159s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 159s Unpacking build-essential (12.10ubuntu1) ... 159s Selecting previously unselected package dctrl-tools. 160s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 160s Unpacking dctrl-tools (2.24-3build2) ... 160s Selecting previously unselected package fonts-dejavu-mono. 160s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 160s Unpacking fonts-dejavu-mono (2.37-8) ... 160s Selecting previously unselected package fonts-dejavu-core. 160s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 160s Unpacking fonts-dejavu-core (2.37-8) ... 160s Selecting previously unselected package fontconfig-config. 160s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 160s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 160s Selecting previously unselected package libfontconfig1:arm64. 160s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 160s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 160s Selecting previously unselected package fontconfig. 160s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 160s Unpacking fontconfig (2.15.0-1ubuntu1) ... 160s Selecting previously unselected package fonts-font-awesome. 160s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 160s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 160s Selecting previously unselected package fonts-glyphicons-halflings. 160s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 160s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 160s Selecting previously unselected package fonts-mathjax. 160s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 160s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 160s Selecting previously unselected package libgfortran5:arm64. 160s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 160s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 160s Selecting previously unselected package libgfortran-13-dev:arm64. 160s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 160s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 160s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 160s Preparing to unpack .../045-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 160s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 161s Selecting previously unselected package gfortran-13. 161s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 161s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 161s Selecting previously unselected package gfortran-aarch64-linux-gnu. 161s Preparing to unpack .../047-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 161s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 161s Selecting previously unselected package gfortran. 161s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 161s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 161s Selecting previously unselected package icu-devtools. 161s Preparing to unpack .../049-icu-devtools_74.2-1ubuntu1_arm64.deb ... 161s Unpacking icu-devtools (74.2-1ubuntu1) ... 161s Selecting previously unselected package javascript-common. 161s Preparing to unpack .../050-javascript-common_11+nmu1_all.deb ... 161s Unpacking javascript-common (11+nmu1) ... 161s Selecting previously unselected package libblas3:arm64. 161s Preparing to unpack .../051-libblas3_3.12.0-3_arm64.deb ... 161s Unpacking libblas3:arm64 (3.12.0-3) ... 161s Selecting previously unselected package libblas-dev:arm64. 161s 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.../057-libxcb-render0_1.15-1_arm64.deb ... 163s Unpacking libxcb-render0:arm64 (1.15-1) ... 164s Selecting previously unselected package libxcb-shm0:arm64. 164s Preparing to unpack .../058-libxcb-shm0_1.15-1_arm64.deb ... 164s Unpacking libxcb-shm0:arm64 (1.15-1) ... 164s Selecting previously unselected package libxrender1:arm64. 164s Preparing to unpack .../059-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 164s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 164s Selecting previously unselected package libcairo2:arm64. 164s Preparing to unpack .../060-libcairo2_1.18.0-1_arm64.deb ... 164s Unpacking libcairo2:arm64 (1.18.0-1) ... 164s Selecting previously unselected package libdatrie1:arm64. 164s Preparing to unpack .../061-libdatrie1_0.2.13-3_arm64.deb ... 164s Unpacking libdatrie1:arm64 (0.2.13-3) ... 164s Selecting previously unselected package libdeflate0:arm64. 164s Preparing to unpack .../062-libdeflate0_1.19-1_arm64.deb ... 164s Unpacking libdeflate0:arm64 (1.19-1) ... 164s Selecting previously unselected package libgraphite2-3:arm64. 164s Preparing to unpack .../063-libgraphite2-3_1.3.14-2_arm64.deb ... 164s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 164s Selecting previously unselected package libharfbuzz0b:arm64. 164s Preparing to unpack .../064-libharfbuzz0b_8.3.0-2_arm64.deb ... 164s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 164s Selecting previously unselected package x11-common. 164s Preparing to unpack .../065-x11-common_1%3a7.7+23ubuntu2_all.deb ... 164s Unpacking x11-common (1:7.7+23ubuntu2) ... 164s Selecting previously unselected package libice6:arm64. 164s Preparing to unpack .../066-libice6_2%3a1.0.10-1build2_arm64.deb ... 164s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 164s Selecting previously unselected package libicu-dev:arm64. 164s Preparing to unpack .../067-libicu-dev_74.2-1ubuntu1_arm64.deb ... 164s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 164s Selecting previously unselected package libjpeg-turbo8:arm64. 164s Preparing to unpack .../068-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 164s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 164s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 164s Preparing to unpack .../069-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 164s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 164s Selecting previously unselected package libjpeg8:arm64. 164s Preparing to unpack .../070-libjpeg8_8c-2ubuntu11_arm64.deb ... 164s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 164s Selecting previously unselected package libjpeg8-dev:arm64. 164s Preparing to unpack .../071-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 164s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 164s Selecting previously unselected package libjpeg-dev:arm64. 164s Preparing to unpack .../072-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 164s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 164s Selecting previously unselected package libjs-bootstrap. 164s Preparing to unpack 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(0.12.6+dfsg-1.1) ... 165s Selecting previously unselected package libjs-jquery-ui. 165s Preparing to unpack .../084-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 165s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 165s Selecting previously unselected package libjs-json. 165s Preparing to unpack .../085-libjs-json_0~20221030+~1.0.8-1_all.deb ... 165s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 165s Selecting previously unselected package libjs-prettify. 165s Preparing to unpack .../086-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 165s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 165s Selecting previously unselected package liblapack3:arm64. 165s Preparing to unpack .../087-liblapack3_3.12.0-3_arm64.deb ... 165s Unpacking liblapack3:arm64 (3.12.0-3) ... 166s Selecting previously unselected package liblapack-dev:arm64. 166s Preparing to unpack .../088-liblapack-dev_3.12.0-3_arm64.deb ... 166s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 166s Selecting previously unselected package liblerc4:arm64. 166s Preparing to unpack .../089-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 166s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 166s Selecting previously unselected package liblua5.4-0:arm64. 166s Preparing to unpack .../090-liblua5.4-0_5.4.6-3_arm64.deb ... 166s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 166s Selecting previously unselected package libncurses-dev:arm64. 166s Preparing to unpack .../091-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 166s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 166s Selecting previously unselected package libthai-data. 166s Preparing to unpack .../092-libthai-data_0.1.29-2_all.deb ... 166s Unpacking libthai-data (0.1.29-2) ... 166s Selecting previously unselected package libthai0:arm64. 166s Preparing to unpack .../093-libthai0_0.1.29-2_arm64.deb ... 166s Unpacking libthai0:arm64 (0.1.29-2) ... 166s Selecting previously unselected package libpango-1.0-0:arm64. 166s Preparing to unpack .../094-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 166s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 166s Selecting previously unselected package libpangoft2-1.0-0:arm64. 166s Preparing to unpack .../095-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 166s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 166s Selecting previously unselected package libpangocairo-1.0-0:arm64. 166s Preparing to unpack .../096-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 166s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 166s Selecting previously unselected package libpaper1:arm64. 166s Preparing to unpack .../097-libpaper1_1.1.29_arm64.deb ... 166s Unpacking libpaper1:arm64 (1.1.29) ... 166s Selecting previously unselected package libpaper-utils. 166s Preparing to unpack .../098-libpaper-utils_1.1.29_arm64.deb ... 166s Unpacking libpaper-utils (1.1.29) ... 166s Selecting previously unselected package libpcre2-16-0:arm64. 166s Preparing to unpack .../099-libpcre2-16-0_10.42-4ubuntu1_arm64.deb 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zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 167s Selecting previously unselected package libpng-dev:arm64. 167s Preparing to unpack .../105-libpng-dev_1.6.43-3_arm64.deb ... 167s Unpacking libpng-dev:arm64 (1.6.43-3) ... 167s Selecting previously unselected package libreadline-dev:arm64. 167s Preparing to unpack .../106-libreadline-dev_8.2-3.1_arm64.deb ... 167s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 167s Selecting previously unselected package libsharpyuv0:arm64. 167s Preparing to unpack .../107-libsharpyuv0_1.3.2-0.4_arm64.deb ... 167s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 167s Selecting previously unselected package libsm6:arm64. 167s Preparing to unpack .../108-libsm6_2%3a1.2.3-1build2_arm64.deb ... 167s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 167s Selecting previously unselected package libtcl8.6:arm64. 167s Preparing to unpack .../109-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 167s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 167s Selecting previously unselected package libjbig0:arm64. 167s Preparing to unpack .../110-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 167s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 167s Selecting previously unselected package libwebp7:arm64. 167s Preparing to unpack .../111-libwebp7_1.3.2-0.4_arm64.deb ... 167s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 167s Selecting previously unselected package libtiff6:arm64. 167s Preparing to unpack .../112-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 167s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 167s Selecting previously unselected package libxft2:arm64. 167s Preparing to unpack .../113-libxft2_2.3.6-1_arm64.deb ... 167s Unpacking libxft2:arm64 (2.3.6-1) ... 167s Selecting previously unselected package libxss1:arm64. 167s Preparing to unpack .../114-libxss1_1%3a1.2.3-1build2_arm64.deb ... 167s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 167s Selecting previously unselected package libtk8.6:arm64. 167s Preparing to unpack .../115-libtk8.6_8.6.13-2_arm64.deb ... 167s Unpacking libtk8.6:arm64 (8.6.13-2) ... 167s Selecting previously unselected package libxt6t64:arm64. 167s Preparing to unpack .../116-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 167s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 167s Selecting previously unselected package zip. 167s Preparing to unpack .../117-zip_3.0-13_arm64.deb ... 167s Unpacking zip (3.0-13) ... 167s Selecting previously unselected package unzip. 167s Preparing to unpack .../118-unzip_6.0-28ubuntu3_arm64.deb ... 167s Unpacking unzip (6.0-28ubuntu3) ... 167s Selecting previously unselected package xdg-utils. 167s Preparing to unpack .../119-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 167s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 167s Selecting previously unselected package r-base-core. 167s Preparing to unpack .../120-r-base-core_4.3.3-2build1_arm64.deb ... 167s Unpacking r-base-core (4.3.3-2build1) ... 168s Selecting previously unselected package r-cran-littler. 168s Preparing to unpack .../121-r-cran-littler_0.3.19-1_arm64.deb ... 168s Unpacking r-cran-littler (0.3.19-1) ... 168s Selecting previously unselected package littler. 168s Preparing to unpack .../122-littler_0.3.19-1_all.deb ... 168s Unpacking littler (0.3.19-1) ... 168s Selecting previously unselected package node-bootstrap-sass. 168s Preparing to unpack .../123-node-bootstrap-sass_3.4.3-2_all.deb ... 168s Unpacking node-bootstrap-sass (3.4.3-2) ... 168s Selecting previously unselected package node-html5shiv. 168s Preparing to unpack .../124-node-html5shiv_3.7.3+dfsg-5_all.deb ... 168s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 168s Selecting previously unselected package node-normalize.css. 168s Preparing to unpack .../125-node-normalize.css_8.0.1-5_all.deb ... 168s Unpacking node-normalize.css (8.0.1-5) ... 168s Selecting previously unselected package pandoc-data. 168s Preparing to unpack .../126-pandoc-data_3.1.3-1_all.deb ... 168s Unpacking pandoc-data (3.1.3-1) ... 168s Selecting previously unselected package pandoc. 168s Preparing to unpack .../127-pandoc_3.1.3+ds-2_arm64.deb ... 168s Unpacking pandoc (3.1.3+ds-2) ... 169s Selecting previously unselected package pkgconf-bin. 169s Preparing to unpack .../128-pkgconf-bin_1.8.1-2_arm64.deb ... 169s Unpacking pkgconf-bin (1.8.1-2) ... 169s Selecting previously unselected package pkgconf:arm64. 169s Preparing to unpack .../129-pkgconf_1.8.1-2_arm64.deb ... 169s Unpacking pkgconf:arm64 (1.8.1-2) ... 169s Selecting previously unselected package pkg-config:arm64. 169s Preparing to unpack .../130-pkg-config_1.8.1-2_arm64.deb ... 169s Unpacking pkg-config:arm64 (1.8.1-2) ... 169s Selecting previously unselected package liblzma-dev:arm64. 169s Preparing to unpack .../131-liblzma-dev_5.4.5-0.3_arm64.deb ... 169s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 169s Selecting previously unselected package r-base-dev. 169s Preparing to unpack .../132-r-base-dev_4.3.3-2build1_all.deb ... 169s Unpacking r-base-dev (4.3.3-2build1) ... 169s Selecting previously unselected package pkg-r-autopkgtest. 169s Preparing to unpack .../133-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 169s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 169s Selecting previously unselected package r-bioc-biocgenerics. 169s Preparing to unpack .../134-r-bioc-biocgenerics_0.48.1-2_all.deb ... 169s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 169s Selecting previously unselected package r-bioc-biobase. 169s Preparing to unpack .../135-r-bioc-biobase_2.62.0-1_arm64.deb ... 169s Unpacking r-bioc-biobase (2.62.0-1) ... 169s Selecting previously unselected package r-cran-formatr. 169s Preparing to unpack .../136-r-cran-formatr_1.14-1_all.deb ... 169s Unpacking r-cran-formatr (1.14-1) ... 169s Selecting previously unselected package r-cran-lambda.r. 169s Preparing to unpack .../137-r-cran-lambda.r_1.2.4-2build1_all.deb ... 169s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 169s Selecting previously unselected package r-cran-futile.options. 170s Preparing to unpack .../138-r-cran-futile.options_1.0.1-3build1_all.deb ... 170s Unpacking r-cran-futile.options (1.0.1-3build1) ... 170s Selecting previously unselected package r-cran-futile.logger. 170s Preparing to unpack .../139-r-cran-futile.logger_1.4.3-4build1_all.deb ... 170s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 170s Selecting previously unselected package r-cran-snow. 170s Preparing to unpack .../140-r-cran-snow_1%3a0.4.4-2_all.deb ... 170s Unpacking r-cran-snow (1:0.4.4-2) ... 170s Selecting previously unselected package r-cran-codetools. 170s Preparing to unpack .../141-r-cran-codetools_0.2-19-1_all.deb ... 170s Unpacking r-cran-codetools (0.2-19-1) ... 170s Selecting previously unselected package r-cran-bh. 170s Preparing to unpack .../142-r-cran-bh_1.84.0-1_all.deb ... 170s Unpacking r-cran-bh (1.84.0-1) ... 170s Selecting previously unselected package r-cran-cpp11. 170s Preparing to unpack .../143-r-cran-cpp11_0.4.7-1_all.deb ... 170s Unpacking r-cran-cpp11 (0.4.7-1) ... 170s Selecting previously unselected package r-bioc-biocparallel. 170s Preparing to unpack .../144-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 170s Unpacking r-bioc-biocparallel (1.36.0-1) ... 170s Selecting previously unselected package r-bioc-s4vectors. 170s Preparing to unpack .../145-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 170s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 170s Selecting previously unselected package r-bioc-iranges. 170s Preparing to unpack .../146-r-bioc-iranges_2.36.0-1_arm64.deb ... 170s Unpacking r-bioc-iranges (2.36.0-1) ... 170s Selecting previously unselected package r-bioc-zlibbioc. 170s Preparing to unpack .../147-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 170s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 170s Selecting previously unselected package r-bioc-xvector. 170s Preparing to unpack .../148-r-bioc-xvector_0.42.0-1_arm64.deb ... 170s Unpacking r-bioc-xvector (0.42.0-1) ... 170s Selecting previously unselected package r-cran-bitops. 170s Preparing to unpack .../149-r-cran-bitops_1.0-7-1_arm64.deb ... 170s Unpacking r-cran-bitops (1.0-7-1) ... 170s Selecting previously unselected package r-cran-rcurl. 170s Preparing to unpack .../150-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 170s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 170s Selecting previously unselected package r-bioc-genomeinfodbdata. 170s Preparing to unpack .../151-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 170s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 170s Selecting previously unselected package r-bioc-genomeinfodb. 170s Preparing to unpack .../152-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 170s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 170s Selecting previously unselected package r-cran-crayon. 170s Preparing to unpack .../153-r-cran-crayon_1.5.2-1_all.deb ... 170s Unpacking r-cran-crayon (1.5.2-1) ... 170s Selecting previously unselected package r-bioc-biostrings. 170s Preparing to unpack .../154-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 170s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 171s Selecting previously unselected package r-cran-lattice. 171s Preparing to unpack .../155-r-cran-lattice_0.22-5-1_arm64.deb ... 171s Unpacking r-cran-lattice (0.22-5-1) ... 171s Selecting previously unselected package r-cran-matrix. 171s Preparing to unpack .../156-r-cran-matrix_1.6-5-1_arm64.deb ... 171s Unpacking r-cran-matrix (1.6-5-1) ... 171s Selecting previously unselected package r-cran-matrixstats. 171s Preparing to unpack .../157-r-cran-matrixstats_1.2.0-1_arm64.deb ... 171s Unpacking r-cran-matrixstats (1.2.0-1) ... 171s Selecting previously unselected package r-bioc-matrixgenerics. 171s Preparing to unpack .../158-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 171s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 171s Selecting previously unselected package r-cran-abind. 171s Preparing to unpack .../159-r-cran-abind_1.4-5-2_all.deb ... 171s Unpacking r-cran-abind (1.4-5-2) ... 171s Selecting previously unselected package r-bioc-s4arrays. 171s Preparing to unpack .../160-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 171s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 171s Selecting previously unselected package r-bioc-sparsearray. 171s Preparing to unpack .../161-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 171s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 171s Selecting previously unselected package r-bioc-delayedarray. 171s Preparing to unpack .../162-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 171s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 171s Selecting previously unselected package r-bioc-genomicranges. 171s Preparing to unpack .../163-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 171s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 171s Selecting previously unselected package r-bioc-summarizedexperiment. 171s Preparing to unpack .../164-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 171s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 171s Selecting previously unselected package r-bioc-rhtslib. 172s Preparing to unpack .../165-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 172s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 172s Selecting previously unselected package r-bioc-rsamtools. 172s Preparing to unpack .../166-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 172s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 172s Selecting previously unselected package r-bioc-genomicalignments. 172s Preparing to unpack .../167-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 172s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 172s Selecting previously unselected package r-cran-mass. 172s Preparing to unpack .../168-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 172s Unpacking r-cran-mass (7.3-60.0.1-1) ... 172s Selecting previously unselected package r-cran-pixmap. 172s Preparing to unpack .../169-r-cran-pixmap_0.4-12-1_all.deb ... 172s Unpacking r-cran-pixmap (0.4-12-1) ... 172s Selecting previously unselected package r-cran-sp. 172s Preparing to unpack .../170-r-cran-sp_1%3a2.1-2+dfsg-1_arm64.deb ... 172s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 172s Selecting previously unselected package r-cran-pkgkitten. 172s Preparing to unpack .../171-r-cran-pkgkitten_0.2.3-1_all.deb ... 172s Unpacking r-cran-pkgkitten (0.2.3-1) ... 173s Selecting previously unselected package r-cran-rcpp. 173s Preparing to unpack .../172-r-cran-rcpp_1.0.12-1_arm64.deb ... 173s Unpacking r-cran-rcpp (1.0.12-1) ... 173s Selecting previously unselected package r-cran-rcpparmadillo. 173s Preparing to unpack .../173-r-cran-rcpparmadillo_0.12.8.0.0-1_arm64.deb ... 173s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 173s Selecting previously unselected package r-cran-ade4. 173s Preparing to unpack .../174-r-cran-ade4_1.7-22-1_arm64.deb ... 173s Unpacking r-cran-ade4 (1.7-22-1) ... 173s Selecting previously unselected package r-cran-jsonlite. 173s Preparing to unpack .../175-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 173s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 173s Selecting previously unselected package r-cran-cli. 173s Preparing to unpack .../176-r-cran-cli_3.6.2-1_arm64.deb ... 173s Unpacking r-cran-cli (3.6.2-1) ... 173s Selecting previously unselected package r-cran-clipr. 173s Preparing to unpack .../177-r-cran-clipr_0.8.0-1_all.deb ... 173s Unpacking r-cran-clipr (0.8.0-1) ... 173s Selecting previously unselected package r-cran-glue. 173s Preparing to unpack .../178-r-cran-glue_1.7.0-1_arm64.deb ... 173s Unpacking r-cran-glue (1.7.0-1) ... 173s Selecting previously unselected package r-cran-rlang. 173s Preparing to unpack .../179-r-cran-rlang_1.1.3-1_arm64.deb ... 173s Unpacking r-cran-rlang (1.1.3-1) ... 173s Selecting previously unselected package r-cran-lifecycle. 173s Preparing to unpack .../180-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 173s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 173s Selecting previously unselected package r-cran-pkgconfig. 173s Preparing to unpack .../181-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 173s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 173s Selecting previously unselected package r-cran-vctrs. 173s Preparing to unpack .../182-r-cran-vctrs_0.6.5-1_arm64.deb ... 173s Unpacking r-cran-vctrs (0.6.5-1) ... 173s Selecting previously unselected package r-cran-hms. 173s Preparing to unpack .../183-r-cran-hms_1.1.3-1_all.deb ... 173s Unpacking r-cran-hms (1.1.3-1) ... 173s Selecting previously unselected package r-cran-r6. 173s Preparing to unpack .../184-r-cran-r6_2.5.1-1_all.deb ... 173s Unpacking r-cran-r6 (2.5.1-1) ... 173s Selecting previously unselected package r-cran-fansi. 173s Preparing to unpack .../185-r-cran-fansi_1.0.5-1_arm64.deb ... 173s Unpacking r-cran-fansi (1.0.5-1) ... 173s Selecting previously unselected package r-cran-magrittr. 174s Preparing to unpack .../186-r-cran-magrittr_2.0.3-1_arm64.deb ... 174s Unpacking r-cran-magrittr (2.0.3-1) ... 174s Selecting previously unselected package r-cran-utf8. 174s Preparing to unpack .../187-r-cran-utf8_1.2.4-1_arm64.deb ... 174s Unpacking r-cran-utf8 (1.2.4-1) ... 174s Selecting previously unselected package r-cran-pillar. 174s Preparing to unpack .../188-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 174s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 174s Selecting previously unselected package r-cran-tibble. 174s Preparing to unpack .../189-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 174s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 175s Selecting previously unselected package r-cran-bit. 175s Preparing to unpack .../190-r-cran-bit_4.0.5-1_arm64.deb ... 175s Unpacking r-cran-bit (4.0.5-1) ... 175s Selecting previously unselected package r-cran-bit64. 175s Preparing to unpack .../191-r-cran-bit64_4.0.5-1_arm64.deb ... 175s Unpacking r-cran-bit64 (4.0.5-1) ... 175s Selecting previously unselected package r-cran-withr. 175s Preparing to unpack .../192-r-cran-withr_2.5.0-1_all.deb ... 175s Unpacking r-cran-withr (2.5.0-1) ... 175s Selecting previously unselected package r-cran-tidyselect. 175s Preparing to unpack .../193-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 175s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 175s Selecting previously unselected package r-cran-tzdb. 175s Preparing to unpack .../194-r-cran-tzdb_0.4.0-2_arm64.deb ... 175s Unpacking r-cran-tzdb (0.4.0-2) ... 175s Selecting previously unselected package r-cran-prettyunits. 175s Preparing to unpack .../195-r-cran-prettyunits_1.2.0-1_all.deb ... 175s Unpacking r-cran-prettyunits (1.2.0-1) ... 175s Selecting previously unselected package r-cran-progress. 175s Preparing to unpack .../196-r-cran-progress_1.2.3-1_all.deb ... 175s Unpacking r-cran-progress (1.2.3-1) ... 175s Selecting previously unselected package r-cran-vroom. 175s Preparing to unpack .../197-r-cran-vroom_1.6.5-1_arm64.deb ... 175s Unpacking r-cran-vroom (1.6.5-1) ... 176s Selecting previously unselected package r-cran-readr. 176s Preparing to unpack .../198-r-cran-readr_2.1.5-1_arm64.deb ... 176s Unpacking r-cran-readr (2.1.5-1) ... 176s Selecting previously unselected package r-cran-stringi. 176s Preparing to unpack .../199-r-cran-stringi_1.8.3-1_arm64.deb ... 176s Unpacking r-cran-stringi (1.8.3-1) ... 176s Selecting previously unselected package r-cran-yaml. 176s Preparing to unpack .../200-r-cran-yaml_2.3.8-1_arm64.deb ... 176s Unpacking r-cran-yaml (2.3.8-1) ... 176s Selecting previously unselected package r-cran-airr. 176s Preparing to unpack .../201-r-cran-airr_1.5.0+dfsg-1_all.deb ... 176s Unpacking r-cran-airr (1.5.0+dfsg-1) ... 176s Selecting previously unselected package r-cran-gtable. 176s Preparing to unpack .../202-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 176s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 176s Selecting previously unselected package r-cran-isoband. 176s Preparing to unpack .../203-r-cran-isoband_0.2.7-1_arm64.deb ... 176s Unpacking r-cran-isoband (0.2.7-1) ... 176s Selecting previously unselected package r-cran-nlme. 176s Preparing to unpack .../204-r-cran-nlme_3.1.164-1_arm64.deb ... 176s Unpacking r-cran-nlme (3.1.164-1) ... 176s Selecting previously unselected package r-cran-mgcv. 176s Preparing to unpack .../205-r-cran-mgcv_1.9-1-1_arm64.deb ... 176s Unpacking r-cran-mgcv (1.9-1-1) ... 176s Selecting previously unselected package r-cran-farver. 176s Preparing to unpack .../206-r-cran-farver_2.1.1-1_arm64.deb ... 176s Unpacking r-cran-farver (2.1.1-1) ... 176s Selecting previously unselected package r-cran-labeling. 176s Preparing to unpack .../207-r-cran-labeling_0.4.3-1_all.deb ... 176s Unpacking r-cran-labeling (0.4.3-1) ... 176s Selecting previously unselected package r-cran-colorspace. 176s Preparing to unpack .../208-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 176s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 176s Selecting previously unselected package r-cran-munsell. 176s Preparing to unpack .../209-r-cran-munsell_0.5.0-2build1_all.deb ... 176s Unpacking r-cran-munsell (0.5.0-2build1) ... 176s Selecting previously unselected package r-cran-rcolorbrewer. 176s Preparing to unpack .../210-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 176s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 176s Selecting previously unselected package r-cran-viridislite. 176s Preparing to unpack .../211-r-cran-viridislite_0.4.2-2_all.deb ... 176s Unpacking r-cran-viridislite (0.4.2-2) ... 177s Selecting previously unselected package r-cran-scales. 177s Preparing to unpack .../212-r-cran-scales_1.3.0-1_all.deb ... 177s Unpacking r-cran-scales (1.3.0-1) ... 177s Selecting previously unselected package r-cran-ggplot2. 177s Preparing to unpack .../213-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 177s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 177s Selecting previously unselected package r-cran-digest. 177s Preparing to unpack .../214-r-cran-digest_0.6.34-1_arm64.deb ... 177s Unpacking r-cran-digest (0.6.34-1) ... 177s Selecting previously unselected package r-cran-ape. 177s Preparing to unpack .../215-r-cran-ape_5.7-1-1_arm64.deb ... 177s Unpacking r-cran-ape (5.7-1-1) ... 177s Selecting previously unselected package r-cran-generics. 177s Preparing to unpack .../216-r-cran-generics_0.1.3-1_all.deb ... 177s Unpacking r-cran-generics (0.1.3-1) ... 177s Selecting previously unselected package r-cran-dplyr. 177s Preparing to unpack .../217-r-cran-dplyr_1.1.4-1_arm64.deb ... 177s Unpacking r-cran-dplyr (1.1.4-1) ... 177s Selecting previously unselected package r-cran-igraph. 177s Preparing to unpack .../218-r-cran-igraph_1.6.0-1_arm64.deb ... 177s Unpacking r-cran-igraph (1.6.0-1) ... 177s Selecting previously unselected package r-cran-segmented. 177s Preparing to unpack .../219-r-cran-segmented_2.0-3-1_all.deb ... 177s Unpacking r-cran-segmented (2.0-3-1) ... 177s Selecting previously unselected package r-cran-seqinr. 177s Preparing to unpack .../220-r-cran-seqinr_4.2-36-1_arm64.deb ... 177s Unpacking r-cran-seqinr (4.2-36-1) ... 178s Selecting previously unselected package r-cran-purrr. 178s Preparing to unpack .../221-r-cran-purrr_1.0.2-1_arm64.deb ... 178s Unpacking r-cran-purrr (1.0.2-1) ... 178s Selecting previously unselected package r-cran-stringr. 178s Preparing to unpack .../222-r-cran-stringr_1.5.1-1_all.deb ... 178s Unpacking r-cran-stringr (1.5.1-1) ... 178s Selecting previously unselected package r-cran-tidyr. 178s Preparing to unpack .../223-r-cran-tidyr_1.3.1-1_arm64.deb ... 178s Unpacking r-cran-tidyr (1.3.1-1) ... 178s Selecting previously unselected package r-cran-alakazam. 178s Preparing to unpack .../224-r-cran-alakazam_1.3.0-1_arm64.deb ... 178s Unpacking r-cran-alakazam (1.3.0-1) ... 178s Selecting previously unselected package r-cran-base64enc. 178s Preparing to unpack .../225-r-cran-base64enc_0.1-3-3_arm64.deb ... 178s Unpacking r-cran-base64enc (0.1-3-3) ... 178s Selecting previously unselected package r-cran-brio. 178s Preparing to unpack .../226-r-cran-brio_1.1.4-1_arm64.deb ... 178s Unpacking r-cran-brio (1.1.4-1) ... 178s Selecting previously unselected package r-cran-fastmap. 178s Preparing to unpack .../227-r-cran-fastmap_1.1.1-1_arm64.deb ... 178s Unpacking r-cran-fastmap (1.1.1-1) ... 178s Selecting previously unselected package r-cran-cachem. 178s Preparing to unpack .../228-r-cran-cachem_1.0.8-1_arm64.deb ... 178s Unpacking r-cran-cachem (1.0.8-1) ... 178s Selecting previously unselected package r-cran-ellipsis. 178s Preparing to unpack .../229-r-cran-ellipsis_0.3.2-2_arm64.deb ... 178s Unpacking r-cran-ellipsis (0.3.2-2) ... 178s Selecting previously unselected package r-cran-htmltools. 178s Preparing to unpack .../230-r-cran-htmltools_0.5.7-1_arm64.deb ... 178s Unpacking r-cran-htmltools (0.5.7-1) ... 178s Selecting previously unselected package r-cran-jquerylib. 178s Preparing to unpack .../231-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 178s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 178s Selecting previously unselected package r-cran-memoise. 178s Preparing to unpack .../232-r-cran-memoise_2.0.1-1_all.deb ... 178s Unpacking r-cran-memoise (2.0.1-1) ... 178s Selecting previously unselected package r-cran-mime. 178s Preparing to unpack .../233-r-cran-mime_0.12-1_arm64.deb ... 178s Unpacking r-cran-mime (0.12-1) ... 178s Selecting previously unselected package r-cran-fs. 178s Preparing to unpack .../234-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 178s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 178s Selecting previously unselected package r-cran-rappdirs. 178s Preparing to unpack .../235-r-cran-rappdirs_0.3.3-1_arm64.deb ... 178s Unpacking r-cran-rappdirs (0.3.3-1) ... 178s Selecting previously unselected package r-cran-sass. 178s Preparing to unpack .../236-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 178s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 178s Selecting previously unselected package r-cran-bslib. 178s Preparing to unpack .../237-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 178s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 178s Selecting previously unselected package r-cran-ps. 178s Preparing to unpack .../238-r-cran-ps_1.7.6-1_arm64.deb ... 178s Unpacking r-cran-ps (1.7.6-1) ... 178s Selecting previously unselected package r-cran-processx. 178s Preparing to unpack .../239-r-cran-processx_3.8.3-1_arm64.deb ... 178s Unpacking r-cran-processx (3.8.3-1) ... 178s Selecting previously unselected package r-cran-callr. 179s Preparing to unpack .../240-r-cran-callr_3.7.3-2_all.deb ... 179s Unpacking r-cran-callr (3.7.3-2) ... 179s Selecting previously unselected package r-cran-commonmark. 179s Preparing to unpack .../241-r-cran-commonmark_1.9.1-1_arm64.deb ... 179s Unpacking r-cran-commonmark (1.9.1-1) ... 179s Selecting previously unselected package r-cran-desc. 179s Preparing to unpack .../242-r-cran-desc_1.4.3-1_all.deb ... 179s Unpacking r-cran-desc (1.4.3-1) ... 179s Selecting previously unselected package r-cran-diffobj. 179s Preparing to unpack .../243-r-cran-diffobj_0.3.5-1_arm64.deb ... 179s Unpacking r-cran-diffobj (0.3.5-1) ... 179s Selecting previously unselected package r-cran-evaluate. 179s Preparing to unpack .../244-r-cran-evaluate_0.23-1_all.deb ... 179s Unpacking r-cran-evaluate (0.23-1) ... 179s Selecting previously unselected package r-cran-fontawesome. 179s Preparing to unpack .../245-r-cran-fontawesome_0.5.2-1_all.deb ... 179s Unpacking r-cran-fontawesome (0.5.2-1) ... 179s Selecting previously unselected package r-cran-xfun. 179s Preparing to unpack .../246-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 179s Unpacking r-cran-xfun (0.41+dfsg-1) ... 179s Selecting previously unselected package r-cran-highr. 179s Preparing to unpack .../247-r-cran-highr_0.10+dfsg-1_all.deb ... 179s Unpacking r-cran-highr (0.10+dfsg-1) ... 179s Selecting previously unselected package r-cran-later. 179s Preparing to unpack .../248-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 179s Unpacking r-cran-later (1.3.2+dfsg-1) ... 179s Selecting previously unselected package r-cran-promises. 179s Preparing to unpack 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using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 185s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 185s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 185s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 185s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 185s Setting up r-cran-bitops (1.0-7-1) ... 185s Setting up r-cran-rprojroot (2.0.4-1) ... 185s Setting up r-cran-bit64 (4.0.5-1) ... 185s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 185s Setting up r-cran-fastmap (1.1.1-1) ... 185s Setting up r-bioc-biobase (2.62.0-1) ... 185s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 185s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 185s Setting up r-cran-sp (1:2.1-2+dfsg-1) ... 185s Setting up r-cran-utf8 (1.2.4-1) ... 185s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 185s Setting up r-cran-stringi (1.8.3-1) ... 185s Setting up r-cran-cpp11 (0.4.7-1) ... 185s Setting up r-cran-segmented (2.0-3-1) ... 185s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 185s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 185s Setting up r-cran-isoband (0.2.7-1) ... 185s Setting up r-cran-futile.logger (1.4.3-4build1) ... 185s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 185s Setting up r-cran-later (1.3.2+dfsg-1) ... 185s Setting up r-cran-matrix (1.6-5-1) ... 185s Setting up r-cran-tinytex (0.49-1) ... 185s Setting up r-cran-knitr (1.45+dfsg-1) ... 185s Setting up r-cran-mgcv (1.9-1-1) ... 185s Setting up g++ (4:13.2.0-7ubuntu1) ... 185s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 185s Setting up r-cran-cachem (1.0.8-1) ... 185s Setting up build-essential (12.10ubuntu1) ... 185s Setting up r-cran-rcpparmadillo (0.12.8.0.0-1) ... 185s Setting up r-bioc-iranges (2.36.0-1) ... 185s Setting up r-cran-tzdb (0.4.0-2) ... 185s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 185s Setting up r-cran-vctrs (0.6.5-1) ... 185s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 185s Setting up r-cran-ellipsis (0.3.2-2) ... 185s Setting up r-base-dev (4.3.3-2build1) ... 185s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 185s Setting up r-cran-stringr (1.5.1-1) ... 185s Setting up r-bioc-biocparallel (1.36.0-1) ... 185s Setting up r-cran-callr (3.7.3-2) ... 185s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 185s Setting up r-cran-desc (1.4.3-1) ... 185s Setting up r-cran-munsell (0.5.0-2build1) ... 185s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 185s Setting up r-cran-igraph (1.6.0-1) ... 185s Setting up r-cran-ade4 (1.7-22-1) ... 185s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 185s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 185s Setting up r-cran-hms (1.1.3-1) ... 185s Setting up r-cran-scales (1.3.0-1) ... 185s Setting up r-cran-memoise (2.0.1-1) ... 185s Setting up r-cran-promises (1.2.1+dfsg-1) ... 185s Setting up r-cran-purrr (1.0.2-1) ... 185s Setting up r-cran-htmltools (0.5.7-1) ... 185s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 185s Setting up r-bioc-xvector (0.42.0-1) ... 185s Setting up r-cran-pkgbuild (1.4.3-1) ... 185s Setting up r-cran-sass (0.4.8+dfsg-1) ... 185s Setting up r-cran-dplyr (1.1.4-1) ... 185s Setting up r-cran-progress (1.2.3-1) ... 185s Setting up r-cran-pkgload (1.3.4-1) ... 185s Setting up r-cran-vroom (1.6.5-1) ... 185s Setting up r-cran-seqinr (4.2-36-1) ... 185s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 185s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 185s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 185s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 185s Setting up r-cran-rematch2 (2.1.2-2build1) ... 185s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 185s Setting up r-cran-fontawesome (0.5.2-1) ... 185s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 185s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 185s Setting up r-cran-readr (2.1.5-1) ... 185s Setting up r-cran-waldo (0.5.2-1build1) ... 185s Setting up r-cran-tidyr (1.3.1-1) ... 185s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 185s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 185s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 185s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 185s Setting up r-cran-airr (1.5.0+dfsg-1) ... 185s Setting up r-cran-testthat (3.2.1-1) ... 185s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 185s Setting up r-bioc-genomicalignments (1.38.2-1) ... 185s Setting up r-cran-alakazam (1.3.0-1) ... 185s Setting up autopkgtest-satdep (0) ... 185s Processing triggers for man-db (2.12.0-3) ... 186s Processing triggers for install-info (7.1-3) ... 186s Processing triggers for libc-bin (2.39-0ubuntu2) ... 200s (Reading database ... 117254 files and directories currently installed.) 200s Removing autopkgtest-satdep (0) ... 201s autopkgtest [17:53:05]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 201s autopkgtest [17:53:05]: test pkg-r-autopkgtest: [----------------------- 201s Test: Try to load the R library alakazam 204s 204s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 204s Copyright (C) 2024 The R Foundation for Statistical Computing 204s Platform: aarch64-unknown-linux-gnu (64-bit) 204s 204s R is free software and comes with ABSOLUTELY NO WARRANTY. 204s You are welcome to redistribute it under certain conditions. 204s Type 'license()' or 'licence()' for distribution details. 204s 204s R is a collaborative project with many contributors. 204s Type 'contributors()' for more information and 204s 'citation()' on how to cite R or R packages in publications. 204s 204s Type 'demo()' for some demos, 'help()' for on-line help, or 204s 'help.start()' for an HTML browser interface to help. 204s Type 'q()' to quit R. 204s 204s > library('alakazam') 204s Loading required package: ggplot2 214s 214s 214s To cite the alakazam package in publications, please use: 214s 214s Gupta N, Vander Heiden J, Uduman M, Gadala-Maria D, Yaari G, 214s Kleinstein S (2015). “Change-O: a toolkit for analyzing large-scale B 214s cell immunoglobulin repertoire sequencing data.” _Bioinformatics_, 214s 1-3. doi:10.1093/bioinformatics/btv359 214s . 214s 214s To cite the Ig-specific lineage reconstruction and diversity methods, 214s please use: 214s 214s Stern J, Yaari G, Vander Heiden J, Church G, Donahue W, Hintzen R, 214s Huttner A, Laman J, Nagra R, Nylander A, Pitt D, Ramanan S, Siddiqui 214s B, Vigneault F, Kleinstein S, Hafler D, O'Connor K (2014). “B cells 214s populating the multiple sclerosis brain mature in the draining 214s cervical lymph nodes.” _Science Translational Medicine_, *6*(248), 214s 248ra107. doi:10.1126/scitranslmed.3008879 214s . 214s 214s To see these entries in BibTeX format, use 'format(, 214s bibtex=TRUE)', or 'toBibtex(.)'. 214s > 214s > 214s Other tests are currently unsupported! 214s They will be progressively added. 215s autopkgtest [17:53:19]: test pkg-r-autopkgtest: -----------------------] 215s pkg-r-autopkgtest PASS 215s autopkgtest [17:53:19]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 216s autopkgtest [17:53:20]: @@@@@@@@@@@@@@@@@@@@ summary 216s pkg-r-autopkgtest PASS 227s Creating nova instance adt-noble-arm64-r-cran-alakazam-20240316-174944-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...