0s autopkgtest [17:05:15]: starting date and time: 2024-03-16 17:05:15+0000 0s autopkgtest [17:05:15]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:05:15]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.oyi63j60/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:hdf5,src:curl,src:libpsl,src:mpich,src:openmpi,src:openssl,src:orthanc-python,src:pmix --apt-upgrade r-bioc-rhdf5lib --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=hdf5/1.10.10+repack-3.1ubuntu3 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 mpich/4.2.0-5build1 openmpi/4.1.6-6ubuntu1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 pmix/5.0.1-4.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-11.secgroup --name adt-noble-arm64-r-bioc-rhdf5lib-20240316-170515-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 154s autopkgtest [17:07:49]: testbed dpkg architecture: arm64 154s autopkgtest [17:07:49]: testbed apt version: 2.7.12 154s autopkgtest [17:07:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 156s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 157s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 157s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 157s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3673 kB] 158s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 158s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 158s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 158s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 158s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 158s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3994 kB] 158s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 158s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 158s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 170s Fetched 9063 kB in 5s (1671 kB/s) 171s Reading package lists... 179s Reading package lists... 180s Building dependency tree... 180s Reading state information... 183s Calculating upgrade... 184s The following packages will be REMOVED: 184s libssl3 184s The following NEW packages will be installed: 184s libssl3t64 184s The following packages have been kept back: 184s curl 184s The following packages will be upgraded: 184s openssl 185s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 185s Need to get 2753 kB of archives. 185s After this operation, 72.7 kB of additional disk space will be used. 185s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 185s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 188s Fetched 2753 kB in 1s (1948 kB/s) 189s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 189s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 189s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 190s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 190s wget depends on libssl3 (>= 3.0.0). 190s u-boot-tools depends on libssl3 (>= 3.0.0). 190s tnftp depends on libssl3 (>= 3.0.0). 190s tcpdump depends on libssl3 (>= 3.0.0). 190s systemd-resolved depends on libssl3 (>= 3.0.0). 190s systemd depends on libssl3 (>= 3.0.0). 190s sudo depends on libssl3 (>= 3.0.0). 190s sbsigntool depends on libssl3 (>= 3.0.0). 190s rsync depends on libssl3 (>= 3.0.0). 190s python3-cryptography depends on libssl3 (>= 3.0.0). 190s openssh-server depends on libssl3 (>= 3.0.10). 190s openssh-client depends on libssl3 (>= 3.0.10). 190s mtd-utils depends on libssl3 (>= 3.0.0). 190s mokutil depends on libssl3 (>= 3.0.0). 190s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 190s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 190s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 190s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 190s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 190s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 190s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 190s libnvme1 depends on libssl3 (>= 3.0.0). 190s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 190s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 190s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 190s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 190s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 190s kmod depends on libssl3 (>= 3.0.0). 190s dhcpcd-base depends on libssl3 (>= 3.0.0). 190s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 190s 190s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 190s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 190s Selecting previously unselected package libssl3t64:arm64. 190s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75839 files and directories currently installed.) 190s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 190s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 190s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 190s Setting up openssl (3.0.13-0ubuntu1) ... 190s Processing triggers for man-db (2.12.0-3) ... 193s Processing triggers for libc-bin (2.39-0ubuntu2) ... 195s Reading package lists... 196s Building dependency tree... 196s Reading state information... 199s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 200s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 200s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 200s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 200s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 207s Reading package lists... 207s Reading package lists... 208s Building dependency tree... 208s Reading state information... 210s Calculating upgrade... 211s The following packages have been kept back: 211s curl 211s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 211s Reading package lists... 212s Building dependency tree... 212s Reading state information... 214s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 218s autopkgtest [17:08:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 218s autopkgtest [17:08:53]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rhdf5lib 221s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rhdf5lib 1.24.2+dfsg-1 (dsc) [2120 B] 221s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rhdf5lib 1.24.2+dfsg-1 (tar) [113 kB] 221s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rhdf5lib 1.24.2+dfsg-1 (diff) [7540 B] 222s gpgv: Signature made Tue Feb 13 12:45:49 2024 UTC 222s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 222s gpgv: issuer "tille@debian.org" 222s gpgv: Can't check signature: No public key 222s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rhdf5lib_1.24.2+dfsg-1.dsc: no acceptable signature found 222s autopkgtest [17:08:57]: testing package r-bioc-rhdf5lib version 1.24.2+dfsg-1 223s autopkgtest [17:08:58]: build not needed 224s autopkgtest [17:08:59]: test pkg-r-autopkgtest: preparing testbed 226s Reading package lists... 227s Building dependency tree... 227s Reading state information... 228s Starting pkgProblemResolver with broken count: 0 229s Starting 2 pkgProblemResolver with broken count: 0 229s Done 231s The following additional packages will be installed: 231s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 231s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 231s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 231s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 231s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 231s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 231s gfortran-aarch64-linux-gnu hdf5-helpers icu-devtools javascript-common 231s libaec-dev libaec0 libasan8 libatomic1 libbibtex-parser-perl libblas-dev 231s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 231s libcurl4-openssl-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 231s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 231s libharfbuzz0b libhdf5-103-1t64 libhdf5-cpp-103-1t64 libhdf5-dev 231s libhdf5-fortran-102t64 libhdf5-hl-100t64 libhdf5-hl-cpp-100t64 231s libhdf5-hl-fortran-100t64 libhwasan0 libice6 libicu-dev libio-string-perl 231s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 231s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 231s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 231s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 231s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 231s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 231s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 231s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 231s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 231s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 231s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 libptexenc1 231s libreadline-dev libsharpyuv0 libsm6 libssl-dev libstdc++-13-dev libsynctex2 231s libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 231s libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 231s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 231s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 231s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 231s pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-biocstyle 231s r-bioc-rhdf5lib r-cran-base64enc r-cran-biocmanager r-cran-bookdown 231s r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli 231s r-cran-commonmark r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest 231s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 231s r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools 231s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 231s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise r-cran-mime 231s r-cran-mockery r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 231s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx 231s r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs r-cran-rcpp 231s r-cran-rematch2 r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-sass 231s r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr 231s r-cran-testthat r-cran-tibble r-cran-tinytest r-cran-tinytex r-cran-utf8 231s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml 231s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 231s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 231s zlib1g-dev 231s Suggested packages: 231s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 231s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 231s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 231s | lighttpd | httpd liblapack-doc glibc-doc libcurl4-doc libidn-dev 231s libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libhdf5-doc icu-doc 231s libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc 231s liblzma-doc ncurses-doc readline-doc libssl-doc libstdc++-13-doc tcl8.6 231s tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 231s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 231s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 231s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 231s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 231s r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges 231s r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi 231s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-runit r-cran-covr 231s r-cran-spelling r-cran-rstudioapi r-cran-markdown r-cran-getopt r-cran-httr 231s r-cran-bit64 r-cran-dbi r-cran-dplyr r-cran-formattable r-cran-ggplot2 231s r-cran-nanotime r-cran-palmerpenguins r-cran-scales r-cran-survival 231s r-cran-units r-cran-vdiffr r-cran-roxygen2 r-cran-inline r-cran-bench 231s r-cran-blob r-cran-here r-cran-hms r-cran-purrr r-cran-tidyr r-cran-plm 231s r-cran-zoo debhelper ghostscript gv | postscript-viewer perl-tk xpdf 231s | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc 231s wp2latex 231s Recommended packages: 231s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 231s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-curl 231s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 231s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-xml2 r-cran-webshot 231s r-cran-covr r-cran-ggplot2 r-cran-thematic r-cran-cliapp r-cran-whoami 231s r-cran-gh r-cran-spelling r-cran-lattice r-cran-unitizer r-cran-dplyr 231s r-cran-rsvg r-cran-dbi r-cran-rsqlite r-cran-cairo r-cran-markdown 231s r-cran-ragg r-cran-httr r-cran-r.rsp r-cran-sf r-cran-codetools 231s r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick r-cran-png 231s r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-svglite 231s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-lubridate 231s r-cran-cpp11 r-cran-bitops r-cran-mathjaxr r-cran-mockr r-cran-webfakes 231s r-cran-future r-cran-purrr r-cran-pingr r-cran-usethis r-cran-dygraphs 231s r-cran-data.table r-cran-formattable r-cran-bit64 r-cran-generics 231s r-cran-pkgdown r-cran-zeallot r-cran-renv r-cran-runit lmodern dvisvgm 231s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 231s x11-xserver-utils 232s The following packages will be REMOVED: 232s libcurl4 libpsl5 232s The following NEW packages will be installed: 232s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 232s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 232s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 232s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 232s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 232s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 232s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 232s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 232s libbibtex-parser-perl libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev 232s libcairo2 libcc1-0 libcrypt-dev libcurl4-openssl-dev libcurl4t64 libdatrie1 232s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 232s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-cpp-103-1t64 232s libhdf5-dev libhdf5-fortran-102t64 libhdf5-hl-100t64 libhdf5-hl-cpp-100t64 232s libhdf5-hl-fortran-100t64 libhwasan0 libice6 libicu-dev libio-string-perl 232s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 232s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 232s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 232s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 232s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 232s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 232s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 232s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 232s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 232s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 232s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 libptexenc1 232s libreadline-dev libsharpyuv0 libsm6 libssl-dev libstdc++-13-dev libsynctex2 232s libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 232s libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 232s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 232s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 232s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 232s pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-biocstyle 232s r-bioc-rhdf5lib r-cran-base64enc r-cran-biocmanager r-cran-bookdown 232s r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli 232s r-cran-commonmark r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest 232s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 232s r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools 232s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 232s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise r-cran-mime 232s r-cran-mockery r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 232s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx 232s r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs r-cran-rcpp 232s r-cran-rematch2 r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-sass 232s r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr 232s r-cran-testthat r-cran-tibble r-cran-tinytest r-cran-tinytex r-cran-utf8 232s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml 232s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 232s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 232s zlib1g-dev 232s The following packages will be upgraded: 232s curl 232s 1 upgraded, 239 newly installed, 2 to remove and 0 not upgraded. 232s Need to get 328 MB/328 MB of archives. 232s After this operation, 1084 MB of additional disk space will be used. 232s Get:1 /tmp/autopkgtest.YhCWbV/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [768 B] 232s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 232s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 233s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 233s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 233s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 233s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 233s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 233s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 233s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 233s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 233s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 234s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 234s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 236s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 236s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 236s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 236s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 236s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 236s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 236s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 236s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 236s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 236s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 236s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 236s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 236s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 236s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 237s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 237s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 237s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 237s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 237s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 238s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 238s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 238s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 238s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 238s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 238s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 238s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 238s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 238s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 238s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 238s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 238s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 238s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 238s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 239s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 239s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 239s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 239s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 239s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 239s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 239s Get:54 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 hdf5-helpers arm64 1.10.10+repack-3.1ubuntu3 [15.8 kB] 239s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 239s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 240s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 240s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 240s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 240s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 240s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 240s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 240s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 240s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 240s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 240s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 240s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 240s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 240s Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4-openssl-dev arm64 8.5.0-2ubuntu7 [454 kB] 240s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 240s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 240s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 240s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 240s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 240s Get:75 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.1ubuntu3 [1192 kB] 240s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-3.1ubuntu3 [120 kB] 240s Get:77 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-3.1ubuntu3 [86.3 kB] 240s Get:78 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.1ubuntu3 [55.8 kB] 240s Get:79 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-3.1ubuntu3 [31.0 kB] 240s Get:80 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-3.1ubuntu3 [11.0 kB] 240s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 240s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 240s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 240s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 240s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 240s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 240s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec-dev arm64 1.1.2-1 [18.8 kB] 240s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl-dev arm64 3.0.13-0ubuntu1 [2335 kB] 240s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-dev arm64 1.10.10+repack-3.1ubuntu3 [3038 kB] 240s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 240s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 240s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 242s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 242s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 242s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 242s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 242s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 242s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 242s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 242s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 242s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 242s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 242s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 242s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 242s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 242s Get:106 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 242s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 242s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 242s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 242s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 243s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 243s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 243s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 243s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 243s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 243s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 243s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 243s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 243s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 243s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 243s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 243s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 243s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 243s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 243s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 243s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 243s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 243s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 243s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 243s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 243s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 243s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 243s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 243s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 243s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 243s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 243s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 243s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 243s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 243s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 243s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 243s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 243s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 243s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 243s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 243s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 243s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 243s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 243s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 243s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 243s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 245s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 245s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 245s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 245s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 245s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 245s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 245s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 246s Get:159 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 246s Get:160 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 246s Get:161 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 246s Get:162 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 246s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 246s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 246s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 246s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 246s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 246s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 246s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 246s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 246s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 246s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 246s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 246s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 246s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 246s Get:176 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 247s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 247s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 247s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 247s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 247s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 247s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 247s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 247s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 247s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 247s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 247s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 247s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 247s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 247s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 247s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 247s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 247s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 247s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 247s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 247s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 247s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 247s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 247s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 247s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 247s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 247s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 248s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 248s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 248s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 248s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 248s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 248s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 248s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 249s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 249s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 250s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 250s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 250s Get:214 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 250s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 251s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 252s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 252s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 258s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 258s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5lib arm64 1.24.2+dfsg-1 [96.1 kB] 258s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 258s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 258s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 258s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 258s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 258s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 258s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 258s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 258s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 258s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 258s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 258s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 258s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 258s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 258s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 258s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 258s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 258s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 258s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mockery all 0.4.4+dfsg-1 [41.3 kB] 258s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytest all 1.4.1-1 [674 kB] 261s Preconfiguring packages ... 261s Fetched 328 MB in 27s (12.3 MB/s) 261s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 261s wget depends on libpsl5 (>= 0.16.0). 261s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 261s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 261s 262s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75852 files and directories currently installed.) 262s Removing libpsl5:arm64 (0.21.2-1build1) ... 262s Selecting previously unselected package libpsl5t64:arm64. 262s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75847 files and directories currently installed.) 262s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 262s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 262s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 262s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 262s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75853 files and directories currently installed.) 262s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 263s Selecting previously unselected package libcurl4t64:arm64. 263s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75848 files and directories currently installed.) 263s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 263s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 263s Selecting previously unselected package libc-dev-bin. 263s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 263s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 263s Selecting previously unselected package linux-libc-dev:arm64. 263s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 263s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 264s Selecting previously unselected package libcrypt-dev:arm64. 264s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 264s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 264s Selecting previously unselected package libtirpc-dev:arm64. 264s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 264s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 264s Selecting previously unselected package libnsl-dev:arm64. 265s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 265s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 265s Selecting previously unselected package rpcsvc-proto. 265s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 265s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 265s Selecting previously unselected package libc6-dev:arm64. 265s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 265s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 265s Selecting previously unselected package libisl23:arm64. 266s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 266s Unpacking libisl23:arm64 (0.26-3) ... 266s Selecting previously unselected package libmpc3:arm64. 266s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 266s Unpacking libmpc3:arm64 (1.3.1-1) ... 266s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 266s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 266s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 267s Selecting previously unselected package cpp-13. 267s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 267s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 267s Selecting previously unselected package cpp-aarch64-linux-gnu. 267s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 267s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 267s Selecting previously unselected package cpp. 267s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 267s Unpacking cpp (4:13.2.0-7ubuntu1) ... 267s Selecting previously unselected package libcc1-0:arm64. 267s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 267s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 267s Selecting previously unselected package libgomp1:arm64. 267s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 267s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 267s Selecting previously unselected package libitm1:arm64. 267s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 267s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 267s Selecting previously unselected package libatomic1:arm64. 267s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 267s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 267s Selecting previously unselected package libasan8:arm64. 267s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package liblsan0:arm64. 268s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libtsan2:arm64. 268s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libubsan1:arm64. 268s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 268s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 268s Selecting previously unselected package libhwasan0:arm64. 269s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 269s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 269s Selecting previously unselected package libgcc-13-dev:arm64. 269s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 269s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 269s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 269s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 269s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 271s Selecting previously unselected package gcc-13. 271s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 271s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 271s Selecting previously unselected package gcc-aarch64-linux-gnu. 271s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 271s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 272s Selecting previously unselected package gcc. 272s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 272s Unpacking gcc (4:13.2.0-7ubuntu1) ... 272s Selecting previously unselected package libstdc++-13-dev:arm64. 272s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 272s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 273s Selecting previously unselected package g++-13-aarch64-linux-gnu. 273s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 273s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 274s Selecting previously unselected package g++-13. 274s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 274s Unpacking g++-13 (13.2.0-17ubuntu2) ... 274s Selecting previously unselected package g++-aarch64-linux-gnu. 274s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 274s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 274s Selecting previously unselected package g++. 274s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 274s Unpacking g++ (4:13.2.0-7ubuntu1) ... 274s Selecting previously unselected package build-essential. 274s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 274s Unpacking build-essential (12.10ubuntu1) ... 274s Selecting previously unselected package dctrl-tools. 274s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 274s Unpacking dctrl-tools (2.24-3build2) ... 275s Selecting previously unselected package fonts-dejavu-mono. 275s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 275s Unpacking fonts-dejavu-mono (2.37-8) ... 275s Selecting previously unselected package fonts-dejavu-core. 275s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 275s Unpacking fonts-dejavu-core (2.37-8) ... 275s Selecting previously unselected package fontconfig-config. 275s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 276s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 276s Selecting previously unselected package libfontconfig1:arm64. 276s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 276s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 276s Selecting previously unselected package fontconfig. 277s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 277s Unpacking fontconfig (2.15.0-1ubuntu1) ... 277s Selecting previously unselected package fonts-font-awesome. 277s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 277s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 277s Selecting previously unselected package fonts-glyphicons-halflings. 277s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 277s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 277s Selecting previously unselected package fonts-lmodern. 277s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 277s Unpacking fonts-lmodern (2.005-1) ... 278s Selecting previously unselected package fonts-mathjax. 278s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 278s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 278s Selecting previously unselected package libgfortran5:arm64. 278s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 278s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libgfortran-13-dev:arm64. 278s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 278s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 279s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 279s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 279s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 280s Selecting previously unselected package gfortran-13. 281s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 281s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 281s Selecting previously unselected package gfortran-aarch64-linux-gnu. 281s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 281s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 281s Selecting previously unselected package gfortran. 281s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 281s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 281s Selecting previously unselected package hdf5-helpers. 281s Preparing to unpack .../050-hdf5-helpers_1.10.10+repack-3.1ubuntu3_arm64.deb ... 281s Unpacking hdf5-helpers (1.10.10+repack-3.1ubuntu3) ... 281s Selecting previously unselected package icu-devtools. 281s Preparing to unpack .../051-icu-devtools_74.2-1ubuntu1_arm64.deb ... 281s Unpacking icu-devtools (74.2-1ubuntu1) ... 282s Selecting previously unselected package javascript-common. 282s Preparing to unpack .../052-javascript-common_11+nmu1_all.deb ... 282s Unpacking javascript-common (11+nmu1) ... 282s Selecting previously unselected package libaec0:arm64. 282s Preparing to unpack .../053-libaec0_1.1.2-1_arm64.deb ... 282s Unpacking libaec0:arm64 (1.1.2-1) ... 282s Selecting previously unselected package libio-string-perl. 282s Preparing to unpack .../054-libio-string-perl_1.08-4_all.deb ... 282s Unpacking libio-string-perl (1.08-4) ... 282s Selecting previously unselected package liblatex-tounicode-perl. 282s Preparing to unpack .../055-liblatex-tounicode-perl_0.54-2_all.deb ... 282s Unpacking liblatex-tounicode-perl (0.54-2) ... 283s Selecting previously unselected package libbibtex-parser-perl. 283s Preparing to unpack .../056-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 283s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 283s Selecting previously unselected package libblas3:arm64. 283s Preparing to unpack .../057-libblas3_3.12.0-3_arm64.deb ... 283s Unpacking libblas3:arm64 (3.12.0-3) ... 283s Selecting previously unselected package libblas-dev:arm64. 283s Preparing to unpack .../058-libblas-dev_3.12.0-3_arm64.deb ... 283s Unpacking libblas-dev:arm64 (3.12.0-3) ... 283s Selecting previously unselected package libbz2-dev:arm64. 283s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 283s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 283s Selecting previously unselected package libpixman-1-0:arm64. 283s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_arm64.deb ... 283s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 283s Selecting previously unselected package libxcb-render0:arm64. 283s Preparing to unpack .../061-libxcb-render0_1.15-1_arm64.deb ... 283s Unpacking libxcb-render0:arm64 (1.15-1) ... 283s Selecting previously unselected package libxcb-shm0:arm64. 283s Preparing to unpack .../062-libxcb-shm0_1.15-1_arm64.deb ... 283s Unpacking libxcb-shm0:arm64 (1.15-1) ... 284s Selecting previously unselected package libxrender1:arm64. 284s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 284s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 284s Selecting previously unselected package libcairo2:arm64. 284s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 284s Unpacking libcairo2:arm64 (1.18.0-1) ... 284s Selecting previously unselected package libcurl4-openssl-dev:arm64. 284s Preparing to unpack .../065-libcurl4-openssl-dev_8.5.0-2ubuntu7_arm64.deb ... 284s Unpacking libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 284s Selecting previously unselected package libdatrie1:arm64. 284s Preparing to unpack .../066-libdatrie1_0.2.13-3_arm64.deb ... 284s Unpacking libdatrie1:arm64 (0.2.13-3) ... 284s Selecting previously unselected package libdeflate0:arm64. 284s Preparing to unpack .../067-libdeflate0_1.19-1_arm64.deb ... 284s Unpacking libdeflate0:arm64 (1.19-1) ... 284s Selecting previously unselected package libgraphite2-3:arm64. 284s Preparing to unpack .../068-libgraphite2-3_1.3.14-2_arm64.deb ... 284s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 284s Selecting previously unselected package libharfbuzz0b:arm64. 284s Preparing to unpack .../069-libharfbuzz0b_8.3.0-2_arm64.deb ... 284s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 285s Selecting previously unselected package libsz2:arm64. 285s Preparing to unpack .../070-libsz2_1.1.2-1_arm64.deb ... 285s Unpacking libsz2:arm64 (1.1.2-1) ... 285s Selecting previously unselected package libhdf5-103-1t64:arm64. 285s Preparing to unpack .../071-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu3_arm64.deb ... 285s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-3.1ubuntu3) ... 285s Selecting previously unselected package libhdf5-cpp-103-1t64:arm64. 285s Preparing to unpack .../072-libhdf5-cpp-103-1t64_1.10.10+repack-3.1ubuntu3_arm64.deb ... 285s Unpacking libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-3.1ubuntu3) ... 285s Selecting previously unselected package libhdf5-fortran-102t64:arm64. 285s Preparing to unpack .../073-libhdf5-fortran-102t64_1.10.10+repack-3.1ubuntu3_arm64.deb ... 285s Unpacking libhdf5-fortran-102t64:arm64 (1.10.10+repack-3.1ubuntu3) ... 285s Selecting previously unselected package libhdf5-hl-100t64:arm64. 285s Preparing to unpack .../074-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu3_arm64.deb ... 285s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-3.1ubuntu3) ... 285s Selecting previously unselected package libhdf5-hl-fortran-100t64:arm64. 285s Preparing to unpack .../075-libhdf5-hl-fortran-100t64_1.10.10+repack-3.1ubuntu3_arm64.deb ... 285s Unpacking libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-3.1ubuntu3) ... 286s Selecting previously unselected package libhdf5-hl-cpp-100t64:arm64. 286s Preparing to unpack .../076-libhdf5-hl-cpp-100t64_1.10.10+repack-3.1ubuntu3_arm64.deb ... 286s Unpacking libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-3.1ubuntu3) ... 286s Selecting previously unselected package zlib1g-dev:arm64. 286s Preparing to unpack .../077-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 286s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 286s Selecting previously unselected package libjpeg-turbo8:arm64. 286s Preparing to unpack .../078-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 286s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 286s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 286s Preparing to unpack .../079-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 286s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 286s Selecting previously unselected package libjpeg8:arm64. 286s Preparing to unpack .../080-libjpeg8_8c-2ubuntu11_arm64.deb ... 286s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 286s Selecting previously unselected package libjpeg8-dev:arm64. 286s Preparing to unpack .../081-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 286s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 286s Selecting previously unselected package libjpeg-dev:arm64. 287s Preparing to unpack .../082-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 287s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 287s Selecting previously unselected package libaec-dev:arm64. 287s Preparing to unpack .../083-libaec-dev_1.1.2-1_arm64.deb ... 287s Unpacking libaec-dev:arm64 (1.1.2-1) ... 287s Selecting previously unselected package libssl-dev:arm64. 287s Preparing to unpack .../084-libssl-dev_3.0.13-0ubuntu1_arm64.deb ... 287s Unpacking libssl-dev:arm64 (3.0.13-0ubuntu1) ... 287s Selecting previously unselected package libhdf5-dev. 287s Preparing to unpack .../085-libhdf5-dev_1.10.10+repack-3.1ubuntu3_arm64.deb ... 287s Unpacking libhdf5-dev (1.10.10+repack-3.1ubuntu3) ... 288s Selecting previously unselected package x11-common. 288s Preparing to unpack .../086-x11-common_1%3a7.7+23ubuntu2_all.deb ... 288s Unpacking x11-common (1:7.7+23ubuntu2) ... 288s Selecting previously unselected package libice6:arm64. 288s Preparing to unpack .../087-libice6_2%3a1.0.10-1build2_arm64.deb ... 288s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 288s Selecting previously unselected package libicu-dev:arm64. 288s Preparing to unpack .../088-libicu-dev_74.2-1ubuntu1_arm64.deb ... 288s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 290s Selecting previously unselected package libjs-bootstrap. 290s Preparing to unpack .../089-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 290s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 290s Selecting previously unselected package libjs-popper.js. 290s Preparing to unpack .../090-libjs-popper.js_1.16.1+ds-6_all.deb ... 290s Unpacking libjs-popper.js (1.16.1+ds-6) ... 290s Selecting previously unselected package libjs-bootstrap4. 290s Preparing to unpack .../091-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 290s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 290s Selecting previously unselected package libjs-d3. 290s Preparing to unpack .../092-libjs-d3_3.5.17-4_all.deb ... 290s Unpacking libjs-d3 (3.5.17-4) ... 291s Selecting previously unselected package libjs-es5-shim. 291s Preparing to unpack .../093-libjs-es5-shim_4.6.7-2_all.deb ... 291s Unpacking libjs-es5-shim (4.6.7-2) ... 291s Selecting previously unselected package libjs-highlight.js. 291s Preparing to unpack .../094-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 291s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 291s Selecting previously unselected package libjs-jquery. 291s Preparing to unpack .../095-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 291s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 291s Selecting previously unselected package libjs-jquery-datatables. 291s Preparing to unpack .../096-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 291s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 291s Selecting previously unselected package libjs-sifter.js. 291s Preparing to unpack .../097-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 291s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 292s Selecting previously unselected package libjs-microplugin.js. 292s Preparing to unpack .../098-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 292s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 292s Selecting previously unselected package libjs-jquery-selectize.js. 292s Preparing to unpack .../099-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb 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(2023.20230311.66589-9) ... 293s Selecting previously unselected package liblapack3:arm64. 293s Preparing to unpack .../105-liblapack3_3.12.0-3_arm64.deb ... 293s Unpacking liblapack3:arm64 (3.12.0-3) ... 293s Selecting previously unselected package liblapack-dev:arm64. 293s Preparing to unpack .../106-liblapack-dev_3.12.0-3_arm64.deb ... 293s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 294s Selecting previously unselected package liblerc4:arm64. 294s Preparing to unpack .../107-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 294s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 294s Selecting previously unselected package liblua5.4-0:arm64. 294s Preparing to unpack .../108-liblua5.4-0_5.4.6-3_arm64.deb ... 294s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 295s Selecting previously unselected package libncurses-dev:arm64. 295s Preparing to unpack .../109-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 295s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 295s Selecting previously unselected package libthai-data. 295s Preparing to unpack .../110-libthai-data_0.1.29-2_all.deb ... 295s Unpacking libthai-data (0.1.29-2) ... 295s Selecting previously unselected package libthai0:arm64. 295s Preparing to unpack .../111-libthai0_0.1.29-2_arm64.deb ... 295s Unpacking libthai0:arm64 (0.1.29-2) ... 295s Selecting previously unselected package libpango-1.0-0:arm64. 295s Preparing to unpack .../112-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 295s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 295s Selecting previously unselected package libpangoft2-1.0-0:arm64. 296s Preparing to unpack .../113-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 296s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 296s Selecting previously unselected package libpangocairo-1.0-0:arm64. 296s Preparing to unpack .../114-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 296s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 296s Selecting previously unselected package libpaper1:arm64. 296s Preparing to unpack .../115-libpaper1_1.1.29_arm64.deb ... 296s Unpacking libpaper1:arm64 (1.1.29) ... 296s Selecting previously unselected package libpaper-utils. 296s Preparing to unpack .../116-libpaper-utils_1.1.29_arm64.deb ... 296s Unpacking libpaper-utils (1.1.29) ... 296s Selecting previously unselected package libpcre2-16-0:arm64. 296s Preparing to unpack .../117-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 296s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 296s Selecting previously unselected package libpcre2-32-0:arm64. 296s Preparing to unpack .../118-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 296s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 296s Selecting previously unselected package libpcre2-posix3:arm64. 296s Preparing to unpack .../119-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 296s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 296s Selecting previously unselected package libpcre2-dev:arm64. 296s Preparing to unpack .../120-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 296s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 297s Selecting previously unselected package libpkgconf3:arm64. 297s Preparing to unpack .../121-libpkgconf3_1.8.1-2_arm64.deb ... 297s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 297s Selecting previously unselected package libpng-dev:arm64. 297s Preparing to unpack .../122-libpng-dev_1.6.43-1_arm64.deb ... 297s Unpacking libpng-dev:arm64 (1.6.43-1) ... 297s Selecting previously unselected package libpotrace0:arm64. 297s Preparing to unpack .../123-libpotrace0_1.16-2_arm64.deb ... 297s Unpacking libpotrace0:arm64 (1.16-2) ... 297s Selecting previously unselected package libptexenc1:arm64. 297s Preparing to unpack .../124-libptexenc1_2023.20230311.66589-9_arm64.deb ... 297s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 297s Selecting previously unselected package libreadline-dev:arm64. 297s Preparing to unpack .../125-libreadline-dev_8.2-3_arm64.deb ... 297s Unpacking libreadline-dev:arm64 (8.2-3) ... 298s Selecting previously unselected package libsharpyuv0:arm64. 298s Preparing to unpack .../126-libsharpyuv0_1.3.2-0.4_arm64.deb ... 298s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 298s Selecting previously unselected package libsm6:arm64. 298s Preparing to unpack .../127-libsm6_2%3a1.2.3-1build2_arm64.deb ... 298s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 298s Selecting previously unselected package libsynctex2:arm64. 298s Preparing to unpack .../128-libsynctex2_2023.20230311.66589-9_arm64.deb ... 298s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 299s Selecting previously unselected package libtcl8.6:arm64. 299s Preparing to unpack .../129-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 299s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 299s Selecting previously unselected package libteckit0:arm64. 299s Preparing to unpack .../130-libteckit0_2.5.12+ds1-1_arm64.deb ... 299s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 299s Selecting previously unselected package libtexlua53-5:arm64. 299s Preparing to unpack .../131-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 299s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 299s Selecting previously unselected package libjbig0:arm64. 299s Preparing to unpack .../132-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 299s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 299s Selecting previously unselected package libwebp7:arm64. 299s Preparing to unpack .../133-libwebp7_1.3.2-0.4_arm64.deb ... 299s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 299s Selecting previously unselected package libtiff6:arm64. 299s Preparing to unpack .../134-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 299s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 299s Selecting previously unselected package libxft2:arm64. 299s Preparing to unpack .../135-libxft2_2.3.6-1_arm64.deb ... 299s Unpacking libxft2:arm64 (2.3.6-1) ... 300s Selecting previously unselected package libxss1:arm64. 300s Preparing to unpack .../136-libxss1_1%3a1.2.3-1build2_arm64.deb ... 300s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 300s Selecting previously unselected package libtk8.6:arm64. 300s Preparing to unpack .../137-libtk8.6_8.6.13-2_arm64.deb ... 300s Unpacking libtk8.6:arm64 (8.6.13-2) ... 300s Selecting previously unselected package libxt6:arm64. 300s Preparing to unpack .../138-libxt6_1%3a1.2.1-1.1_arm64.deb ... 300s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 300s Selecting previously unselected package libxmu6:arm64. 300s Preparing to unpack .../139-libxmu6_2%3a1.1.3-3_arm64.deb ... 300s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 300s Selecting previously unselected package libxpm4:arm64. 300s Preparing to unpack .../140-libxpm4_1%3a3.5.17-1_arm64.deb ... 300s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 300s Selecting previously unselected package libxaw7:arm64. 300s Preparing to unpack .../141-libxaw7_2%3a1.0.14-1_arm64.deb ... 300s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 301s Selecting previously unselected package libxi6:arm64. 301s Preparing to unpack .../142-libxi6_2%3a1.8.1-1_arm64.deb ... 301s Unpacking libxi6:arm64 (2:1.8.1-1) ... 301s Selecting previously unselected package libzzip-0-13:arm64. 301s Preparing to unpack .../143-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 301s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 301s Selecting previously unselected package zip. 301s Preparing to unpack .../144-zip_3.0-13_arm64.deb ... 301s Unpacking zip (3.0-13) ... 301s Selecting previously unselected package unzip. 302s Preparing to unpack .../145-unzip_6.0-28ubuntu3_arm64.deb ... 302s Unpacking unzip (6.0-28ubuntu3) ... 302s Selecting previously unselected package xdg-utils. 302s Preparing to unpack .../146-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 302s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 302s Selecting previously unselected package r-base-core. 302s Preparing to unpack .../147-r-base-core_4.3.2-1build1_arm64.deb ... 302s Unpacking r-base-core (4.3.2-1build1) ... 304s Selecting previously unselected package r-cran-littler. 304s Preparing to unpack .../148-r-cran-littler_0.3.19-1_arm64.deb ... 304s Unpacking r-cran-littler (0.3.19-1) ... 304s Selecting previously unselected package littler. 304s Preparing to unpack .../149-littler_0.3.19-1_all.deb ... 304s Unpacking littler (0.3.19-1) ... 304s Selecting previously unselected package node-bootstrap-sass. 304s Preparing to unpack .../150-node-bootstrap-sass_3.4.3-2_all.deb ... 304s Unpacking node-bootstrap-sass (3.4.3-2) ... 305s Selecting previously unselected package node-html5shiv. 305s Preparing to unpack .../151-node-html5shiv_3.7.3+dfsg-5_all.deb ... 305s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 305s Selecting previously unselected package node-normalize.css. 305s Preparing to unpack .../152-node-normalize.css_8.0.1-5_all.deb ... 305s Unpacking node-normalize.css (8.0.1-5) ... 305s Selecting previously unselected package pandoc-data. 305s Preparing to unpack .../153-pandoc-data_3.1.3-1_all.deb ... 305s Unpacking pandoc-data (3.1.3-1) ... 305s Selecting previously unselected package pandoc. 305s Preparing to unpack .../154-pandoc_3.1.3+ds-2_arm64.deb ... 305s Unpacking pandoc (3.1.3+ds-2) ... 314s Selecting previously unselected package pkgconf-bin. 314s Preparing to unpack .../155-pkgconf-bin_1.8.1-2_arm64.deb ... 314s Unpacking pkgconf-bin (1.8.1-2) ... 314s Selecting previously unselected package pkgconf:arm64. 314s Preparing to unpack .../156-pkgconf_1.8.1-2_arm64.deb ... 314s Unpacking pkgconf:arm64 (1.8.1-2) ... 314s Selecting previously unselected package pkg-config:arm64. 314s Preparing to unpack .../157-pkg-config_1.8.1-2_arm64.deb ... 314s Unpacking pkg-config:arm64 (1.8.1-2) ... 314s Selecting previously unselected package liblzma-dev:arm64. 315s Preparing to unpack .../158-liblzma-dev_5.4.5-0.3_arm64.deb ... 315s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 315s Selecting previously unselected package r-base-dev. 315s Preparing to unpack .../159-r-base-dev_4.3.2-1build1_all.deb ... 315s Unpacking r-base-dev (4.3.2-1build1) ... 315s Selecting previously unselected package pkg-r-autopkgtest. 315s Preparing to unpack .../160-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 315s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 315s Selecting previously unselected package r-bioc-biocgenerics. 315s Preparing to unpack .../161-r-bioc-biocgenerics_0.48.1-2_all.deb ... 315s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 315s Selecting previously unselected package r-cran-base64enc. 315s Preparing to unpack .../162-r-cran-base64enc_0.1-3-3_arm64.deb ... 315s Unpacking r-cran-base64enc (0.1-3-3) ... 315s Selecting previously unselected package r-cran-digest. 315s Preparing to unpack .../163-r-cran-digest_0.6.34-1_arm64.deb ... 315s Unpacking r-cran-digest (0.6.34-1) ... 315s Selecting previously unselected package r-cran-rlang. 316s Preparing to unpack .../164-r-cran-rlang_1.1.3-1_arm64.deb ... 316s Unpacking r-cran-rlang (1.1.3-1) ... 316s Selecting previously unselected package r-cran-ellipsis. 316s Preparing to unpack .../165-r-cran-ellipsis_0.3.2-2_arm64.deb ... 316s Unpacking r-cran-ellipsis (0.3.2-2) ... 316s Selecting previously unselected package r-cran-fastmap. 316s Preparing to unpack .../166-r-cran-fastmap_1.1.1-1_arm64.deb ... 316s Unpacking r-cran-fastmap (1.1.1-1) ... 316s Selecting previously unselected package r-cran-htmltools. 316s Preparing to unpack .../167-r-cran-htmltools_0.5.7-1_arm64.deb ... 316s Unpacking r-cran-htmltools (0.5.7-1) ... 317s Selecting previously unselected package r-cran-evaluate. 317s Preparing to unpack .../168-r-cran-evaluate_0.23-1_all.deb ... 317s Unpacking r-cran-evaluate (0.23-1) ... 317s Selecting previously unselected package r-cran-xfun. 317s Preparing to unpack .../169-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 317s Unpacking r-cran-xfun (0.41+dfsg-1) ... 317s Selecting previously unselected package r-cran-highr. 317s Preparing to unpack .../170-r-cran-highr_0.10+dfsg-1_all.deb ... 317s Unpacking r-cran-highr (0.10+dfsg-1) ... 317s Selecting previously unselected package r-cran-yaml. 317s Preparing to unpack .../171-r-cran-yaml_2.3.8-1_arm64.deb ... 317s Unpacking r-cran-yaml (2.3.8-1) ... 318s Selecting previously unselected package libjs-mathjax. 318s Preparing to unpack .../172-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 318s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 325s Selecting previously unselected package r-cran-knitr. 325s Preparing to unpack .../173-r-cran-knitr_1.45+dfsg-1_all.deb ... 325s Unpacking r-cran-knitr (1.45+dfsg-1) ... 325s Selecting previously unselected package r-cran-cachem. 325s Preparing to unpack .../174-r-cran-cachem_1.0.8-1_arm64.deb ... 325s Unpacking r-cran-cachem (1.0.8-1) ... 325s Selecting previously unselected package r-cran-jquerylib. 325s Preparing to unpack .../175-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 325s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 325s Selecting previously unselected package r-cran-jsonlite. 325s Preparing to unpack .../176-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 325s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 326s Selecting previously unselected package r-cran-cli. 326s Preparing to unpack .../177-r-cran-cli_3.6.2-1_arm64.deb ... 326s Unpacking r-cran-cli (3.6.2-1) ... 326s Selecting previously unselected package r-cran-glue. 326s Preparing to unpack .../178-r-cran-glue_1.7.0-1_arm64.deb ... 326s Unpacking r-cran-glue (1.7.0-1) ... 326s Selecting previously unselected package r-cran-lifecycle. 326s Preparing to unpack .../179-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 326s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 326s Selecting previously unselected package r-cran-memoise. 326s Preparing to unpack .../180-r-cran-memoise_2.0.1-1_all.deb ... 326s Unpacking r-cran-memoise (2.0.1-1) ... 326s Selecting previously unselected package r-cran-mime. 327s Preparing to unpack .../181-r-cran-mime_0.12-1_arm64.deb ... 327s Unpacking r-cran-mime (0.12-1) ... 327s Selecting previously unselected package r-cran-fs. 327s Preparing to unpack .../182-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 327s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 327s Selecting previously unselected package r-cran-r6. 327s Preparing to unpack .../183-r-cran-r6_2.5.1-1_all.deb ... 327s Unpacking r-cran-r6 (2.5.1-1) ... 327s Selecting previously unselected package r-cran-rappdirs. 327s Preparing to unpack .../184-r-cran-rappdirs_0.3.3-1_arm64.deb ... 327s Unpacking r-cran-rappdirs (0.3.3-1) ... 327s Selecting previously unselected package r-cran-sass. 327s Preparing to unpack .../185-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 327s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 328s Selecting previously unselected package r-cran-bslib. 328s Preparing to unpack .../186-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 328s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 330s Selecting previously unselected package r-cran-fontawesome. 331s Preparing to unpack .../187-r-cran-fontawesome_0.5.2-1_all.deb ... 331s Unpacking r-cran-fontawesome (0.5.2-1) ... 331s Selecting previously unselected package r-cran-magrittr. 331s Preparing to unpack .../188-r-cran-magrittr_2.0.3-1_arm64.deb ... 331s Unpacking r-cran-magrittr (2.0.3-1) ... 331s Selecting previously unselected package r-cran-stringi. 331s Preparing to unpack .../189-r-cran-stringi_1.8.3-1_arm64.deb ... 331s Unpacking r-cran-stringi (1.8.3-1) ... 331s Selecting previously unselected package r-cran-vctrs. 331s Preparing to unpack .../190-r-cran-vctrs_0.6.5-1_arm64.deb ... 331s Unpacking r-cran-vctrs (0.6.5-1) ... 332s Selecting previously unselected package r-cran-stringr. 332s Preparing to unpack .../191-r-cran-stringr_1.5.1-1_all.deb ... 332s Unpacking r-cran-stringr (1.5.1-1) ... 332s Selecting previously unselected package r-cran-tinytex. 332s Preparing to unpack .../192-r-cran-tinytex_0.49-1_all.deb ... 332s Unpacking r-cran-tinytex (0.49-1) ... 332s Selecting previously unselected package libjs-modernizr. 332s Preparing to unpack .../193-libjs-modernizr_2.6.2+ds1-5_all.deb ... 332s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 332s Selecting previously unselected package r-cran-pkgkitten. 332s Preparing to unpack .../194-r-cran-pkgkitten_0.2.3-1_all.deb ... 332s Unpacking r-cran-pkgkitten (0.2.3-1) ... 333s Selecting previously unselected package r-cran-rcpp. 333s Preparing to unpack .../195-r-cran-rcpp_1.0.12-1_arm64.deb ... 333s Unpacking r-cran-rcpp (1.0.12-1) ... 334s Selecting previously unselected package r-cran-later. 334s Preparing to unpack .../196-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 334s Unpacking r-cran-later (1.3.2+dfsg-1) ... 335s Selecting previously unselected package r-cran-promises. 335s Preparing to unpack .../197-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 335s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 335s Selecting previously unselected package r-cran-httpuv. 335s Preparing to unpack .../198-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 335s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 335s Selecting previously unselected package r-cran-xtable. 335s Preparing to unpack .../199-r-cran-xtable_1%3a1.8-4-2_all.deb ... 335s Unpacking r-cran-xtable (1:1.8-4-2) ... 335s Selecting previously unselected package r-cran-sourcetools. 335s Preparing to unpack .../200-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 335s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 336s Selecting previously unselected package r-cran-crayon. 336s Preparing to unpack .../201-r-cran-crayon_1.5.2-1_all.deb ... 336s Unpacking r-cran-crayon (1.5.2-1) ... 336s Selecting previously unselected package r-cran-withr. 336s Preparing to unpack .../202-r-cran-withr_2.5.0-1_all.deb ... 336s Unpacking r-cran-withr (2.5.0-1) ... 336s Selecting previously unselected package r-cran-commonmark. 336s Preparing to unpack .../203-r-cran-commonmark_1.9.1-1_arm64.deb ... 336s Unpacking r-cran-commonmark (1.9.1-1) ... 336s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 336s Preparing to unpack .../204-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 336s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 337s Selecting previously unselected package r-cran-shiny. 337s Preparing to unpack .../205-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 337s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 337s Selecting previously unselected package r-cran-rmarkdown. 337s Preparing to unpack .../206-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 337s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 338s Selecting previously unselected package r-cran-bookdown. 338s Preparing to unpack .../207-r-cran-bookdown_0.37+dfsg-1_all.deb ... 338s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 338s Selecting previously unselected package r-cran-biocmanager. 338s Preparing to unpack .../208-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 338s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 339s Selecting previously unselected package tex-common. 339s Preparing to unpack .../209-tex-common_6.18_all.deb ... 339s Unpacking tex-common (6.18) ... 339s Selecting previously unselected package t1utils. 339s Preparing to unpack .../210-t1utils_1.41-4build2_arm64.deb ... 339s Unpacking t1utils (1.41-4build2) ... 339s Selecting previously unselected package texlive-binaries. 339s Preparing to unpack .../211-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 339s Unpacking texlive-binaries (2023.20230311.66589-9) ... 341s Selecting previously unselected package texlive-base. 341s Preparing to unpack .../212-texlive-base_2023.20240207-1_all.deb ... 341s Unpacking texlive-base (2023.20240207-1) ... 348s Selecting previously unselected package texlive-latex-base. 348s Preparing to unpack .../213-texlive-latex-base_2023.20240207-1_all.deb ... 348s Unpacking texlive-latex-base (2023.20240207-1) ... 350s Selecting previously unselected package texlive-bibtex-extra. 350s Preparing to unpack .../214-texlive-bibtex-extra_2023.20240207-1_all.deb ... 350s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 365s Selecting previously unselected package r-bioc-biocstyle. 365s Preparing to unpack .../215-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 365s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 366s Selecting previously unselected package r-bioc-rhdf5lib. 366s Preparing to unpack .../216-r-bioc-rhdf5lib_1.24.2+dfsg-1_arm64.deb ... 366s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 366s Selecting previously unselected package r-cran-brio. 366s Preparing to unpack .../217-r-cran-brio_1.1.4-1_arm64.deb ... 366s Unpacking r-cran-brio (1.1.4-1) ... 366s Selecting previously unselected package r-cran-ps. 366s Preparing to unpack .../218-r-cran-ps_1.7.6-1_arm64.deb ... 366s Unpacking r-cran-ps (1.7.6-1) ... 366s Selecting previously unselected package r-cran-processx. 366s Preparing to unpack .../219-r-cran-processx_3.8.3-1_arm64.deb ... 366s Unpacking r-cran-processx (3.8.3-1) ... 366s Selecting previously unselected package r-cran-callr. 366s Preparing to unpack .../220-r-cran-callr_3.7.3-2_all.deb ... 366s Unpacking r-cran-callr (3.7.3-2) ... 367s Selecting previously unselected package r-cran-desc. 367s Preparing to unpack .../221-r-cran-desc_1.4.3-1_all.deb ... 367s Unpacking r-cran-desc (1.4.3-1) ... 367s Selecting previously unselected package r-cran-diffobj. 367s Preparing to unpack .../222-r-cran-diffobj_0.3.5-1_arm64.deb ... 367s Unpacking r-cran-diffobj (0.3.5-1) ... 367s Selecting previously unselected package r-cran-fansi. 367s Preparing to unpack .../223-r-cran-fansi_1.0.5-1_arm64.deb ... 367s Unpacking r-cran-fansi (1.0.5-1) ... 367s Selecting previously unselected package r-cran-pkgbuild. 368s Preparing to unpack .../224-r-cran-pkgbuild_1.4.3-1_all.deb ... 368s Unpacking r-cran-pkgbuild (1.4.3-1) ... 368s Selecting previously unselected package r-cran-rprojroot. 368s Preparing to unpack .../225-r-cran-rprojroot_2.0.4-1_all.deb ... 368s Unpacking r-cran-rprojroot (2.0.4-1) ... 368s Selecting previously unselected package r-cran-pkgload. 368s Preparing to unpack .../226-r-cran-pkgload_1.3.4-1_all.deb ... 368s Unpacking r-cran-pkgload (1.3.4-1) ... 368s Selecting previously unselected package r-cran-praise. 368s Preparing to unpack .../227-r-cran-praise_1.0.0-4build1_all.deb ... 368s Unpacking r-cran-praise (1.0.0-4build1) ... 368s Selecting previously unselected package r-cran-utf8. 369s Preparing to unpack .../228-r-cran-utf8_1.2.4-1_arm64.deb ... 369s Unpacking r-cran-utf8 (1.2.4-1) ... 369s Selecting previously unselected package r-cran-pillar. 369s Preparing to unpack .../229-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 369s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 369s Selecting previously unselected package r-cran-pkgconfig. 369s Preparing to unpack .../230-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 369s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 369s Selecting previously unselected package r-cran-tibble. 369s Preparing to unpack .../231-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 369s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 370s Selecting previously unselected package r-cran-rematch2. 370s Preparing to unpack .../232-r-cran-rematch2_2.1.2-2build1_all.deb ... 370s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 370s Selecting previously unselected package r-cran-waldo. 370s Preparing to unpack .../233-r-cran-waldo_0.5.2-1build1_all.deb ... 370s Unpacking r-cran-waldo (0.5.2-1build1) ... 371s Selecting previously unselected package r-cran-testthat. 371s Preparing to unpack .../234-r-cran-testthat_3.2.1-1_arm64.deb ... 371s Unpacking r-cran-testthat (3.2.1-1) ... 371s Selecting previously unselected package r-cran-mockery. 371s Preparing to unpack .../235-r-cran-mockery_0.4.4+dfsg-1_all.deb ... 371s Unpacking r-cran-mockery (0.4.4+dfsg-1) ... 371s Selecting previously unselected package r-cran-tinytest. 371s Preparing to unpack .../236-r-cran-tinytest_1.4.1-1_all.deb ... 371s Unpacking r-cran-tinytest (1.4.1-1) ... 371s Selecting previously unselected package autopkgtest-satdep. 371s Preparing to unpack .../237-1-autopkgtest-satdep.deb ... 371s Unpacking autopkgtest-satdep (0) ... 372s Setting up libjs-json (0~20221030+~1.0.8-1) ... 372s Setting up javascript-common (11+nmu1) ... 372s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 372s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 372s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 372s Setting up libpaper1:arm64 (1.1.29) ... 373s 373s Creating config file /etc/papersize with new version 373s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 373s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 373s Setting up libxpm4:arm64 (1:3.5.17-1) ... 373s Setting up hdf5-helpers (1.10.10+repack-3.1ubuntu3) ... 373s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 373s Setting up libxi6:arm64 (2:1.8.1-1) ... 373s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 373s Setting up libdatrie1:arm64 (0.2.13-3) ... 373s Setting up libjs-popper.js (1.16.1+ds-6) 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/var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 392s Setting up r-cran-magrittr (2.0.3-1) ... 392s Setting up r-cran-rappdirs (0.3.3-1) ... 392s Setting up r-cran-littler (0.3.19-1) ... 392s Setting up r-cran-fs (1.6.3+dfsg-1) ... 392s Setting up r-cran-rcpp (1.0.12-1) ... 392s Setting up r-cran-brio (1.1.4-1) ... 392s Setting up r-cran-diffobj (0.3.5-1) ... 392s Setting up r-bioc-biocgenerics (0.48.1-2) ... 392s Setting up r-cran-rlang (1.1.3-1) ... 392s Setting up littler (0.3.19-1) ... 392s Setting up r-cran-xfun (0.41+dfsg-1) ... 392s Setting up r-cran-withr (2.5.0-1) ... 392s Setting up r-cran-processx (3.8.3-1) ... 392s Setting up r-cran-mime (0.12-1) ... 392s Setting up r-cran-praise (1.0.0-4build1) ... 392s Setting up r-cran-base64enc (0.1-3-3) ... 392s Setting up r-cran-digest (0.6.34-1) ... 392s Setting up r-cran-yaml (2.3.8-1) ... 392s Setting up r-cran-evaluate (0.23-1) ... 392s Setting up r-cran-highr (0.10+dfsg-1) ... 392s Setting up r-cran-fansi (1.0.5-1) ... 392s Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 392s Setting up r-cran-glue (1.7.0-1) ... 392s Setting up r-cran-xtable (1:1.8-4-2) ... 392s Setting up r-cran-cli (3.6.2-1) ... 392s Setting up gfortran (4:13.2.0-7ubuntu1) ... 392s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 392s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 392s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 392s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 392s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 392s Setting up r-cran-rprojroot (2.0.4-1) ... 392s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 392s Setting up r-cran-fastmap (1.1.1-1) ... 392s Setting up r-cran-jsonlite 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... 392s Setting up r-cran-memoise (2.0.1-1) ... 392s Setting up r-cran-promises (1.2.1+dfsg-1) ... 392s Setting up r-cran-htmltools (0.5.7-1) ... 392s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 392s Setting up r-cran-pkgbuild (1.4.3-1) ... 392s Setting up r-cran-sass (0.4.8+dfsg-1) ... 392s Setting up r-cran-pkgload (1.3.4-1) ... 392s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 392s Setting up r-cran-rematch2 (2.1.2-2build1) ... 392s Setting up r-cran-fontawesome (0.5.2-1) ... 392s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 392s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 392s Setting up r-cran-waldo (0.5.2-1build1) ... 392s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 392s Setting up r-cran-testthat (3.2.1-1) ... 392s Setting up r-cran-mockery (0.4.4+dfsg-1) ... 392s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 392s Setting up r-cran-bookdown (0.37+dfsg-1) ... 392s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 392s Setting up autopkgtest-satdep (0) ... 392s Processing triggers for man-db (2.12.0-3) ... 397s Processing triggers for install-info (7.1-3) ... 398s Processing triggers for libc-bin (2.39-0ubuntu2) ... 398s Processing triggers for tex-common (6.18) ... 400s Running updmap-sys. This may take some time... done. 400s Running mktexlsr /var/lib/texmf ... done. 400s Building format(s) --all. 528s This may take some time... done. 564s (Reading database ... 104998 files and directories currently installed.) 564s Removing autopkgtest-satdep (0) ... 565s autopkgtest [17:14:40]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 565s autopkgtest [17:14:40]: test pkg-r-autopkgtest: [----------------------- 566s Test: Try to load the R library Rhdf5lib 567s 567s R version 4.3.2 (2023-10-31) -- "Eye Holes" 567s Copyright (C) 2023 The R Foundation for Statistical Computing 567s Platform: aarch64-unknown-linux-gnu (64-bit) 567s 567s R is free software and comes with ABSOLUTELY NO WARRANTY. 567s You are welcome to redistribute it under certain conditions. 567s Type 'license()' or 'licence()' for distribution details. 567s 567s R is a collaborative project with many contributors. 567s Type 'contributors()' for more information and 567s 'citation()' on how to cite R or R packages in publications. 567s 567s Type 'demo()' for some demos, 'help()' for on-line help, or 567s 'help.start()' for an HTML browser interface to help. 567s Type 'q()' to quit R. 567s 567s > library('Rhdf5lib') 567s > 567s > 567s Other tests are currently unsupported! 567s They will be progressively added. 568s autopkgtest [17:14:43]: test pkg-r-autopkgtest: -----------------------] 569s pkg-r-autopkgtest PASS 569s autopkgtest [17:14:44]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 570s autopkgtest [17:14:45]: @@@@@@@@@@@@@@@@@@@@ summary 570s pkg-r-autopkgtest PASS 588s Creating nova instance adt-noble-arm64-r-bioc-rhdf5lib-20240316-170515-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240316.img (UUID 9d2e92bf-2787-45c2-ae22-99fb4bcc175e)...