0s autopkgtest [17:39:37]: starting date and time: 2024-03-16 17:39:37+0000 0s autopkgtest [17:39:37]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:39:37]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.663h8tbs/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-progeny --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-25.secgroup --name adt-noble-arm64-r-bioc-progeny-20240316-173937-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 141s autopkgtest [17:41:58]: testbed dpkg architecture: arm64 141s autopkgtest [17:41:58]: testbed apt version: 2.7.12 141s autopkgtest [17:41:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 141s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 142s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 142s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 142s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 142s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 142s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 142s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 142s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 142s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 142s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 142s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 142s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 142s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 145s Fetched 9060 kB in 2s (5634 kB/s) 145s Reading package lists... 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 149s Calculating upgrade... 149s The following packages will be REMOVED: 149s libglib2.0-0 libssl3 149s The following NEW packages will be installed: 149s libglib2.0-0t64 libssl3t64 xdg-user-dirs 149s The following packages have been kept back: 149s curl 149s The following packages will be upgraded: 149s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 149s ubuntu-minimal ubuntu-standard 150s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 150s Need to get 4613 kB of archives. 150s After this operation, 211 kB of additional disk space will be used. 150s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 150s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 150s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 150s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 150s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 150s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 150s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 150s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 150s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 150s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 151s Fetched 4613 kB in 1s (5920 kB/s) 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 151s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 151s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 151s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 151s udisks2 depends on libglib2.0-0 (>= 2.77.0). 151s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 151s python3-gi depends on libglib2.0-0 (>= 2.77.0). 151s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 151s netplan.io depends on libglib2.0-0 (>= 2.70.0). 151s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 151s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 151s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 151s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 151s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 151s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 151s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 151s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 151s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 151s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 151s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 151s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 151s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 151s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 151s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 151s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 151s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 151s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 151s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 151s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 151s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 151s fwupd depends on libglib2.0-0 (>= 2.79.0). 151s bolt depends on libglib2.0-0 (>= 2.56.0). 151s 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 151s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 151s Selecting previously unselected package libglib2.0-0t64:arm64. 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 151s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 151s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 151s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 151s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 151s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 151s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 151s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 151s wget depends on libssl3 (>= 3.0.0). 151s u-boot-tools depends on libssl3 (>= 3.0.0). 151s tnftp depends on libssl3 (>= 3.0.0). 151s tcpdump depends on libssl3 (>= 3.0.0). 151s systemd-resolved depends on libssl3 (>= 3.0.0). 151s systemd depends on libssl3 (>= 3.0.0). 151s sudo depends on libssl3 (>= 3.0.0). 151s sbsigntool depends on libssl3 (>= 3.0.0). 151s rsync depends on libssl3 (>= 3.0.0). 151s python3-cryptography depends on libssl3 (>= 3.0.0). 151s openssh-server depends on libssl3 (>= 3.0.10). 151s openssh-client depends on libssl3 (>= 3.0.10). 151s mtd-utils depends on libssl3 (>= 3.0.0). 151s mokutil depends on libssl3 (>= 3.0.0). 151s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 151s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 151s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 151s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 151s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 151s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 151s libnvme1 depends on libssl3 (>= 3.0.0). 151s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 151s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 151s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 151s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 151s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 151s kmod depends on libssl3 (>= 3.0.0). 151s dhcpcd-base depends on libssl3 (>= 3.0.0). 151s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 151s 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 151s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 151s Selecting previously unselected package libssl3t64:arm64. 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 152s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 152s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 152s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 152s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 152s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 152s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 152s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 152s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 152s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 152s Unpacking ubuntu-minimal (1.536) over (1.535) ... 152s Selecting previously unselected package xdg-user-dirs. 152s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 152s Unpacking xdg-user-dirs (0.18-1) ... 152s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 152s Unpacking ubuntu-standard (1.536) over (1.535) ... 152s Setting up ubuntu-minimal (1.536) ... 152s Setting up xdg-user-dirs (0.18-1) ... 152s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 152s Setting up libtirpc-common (1.3.4+ds-1.1) ... 152s Setting up ubuntu-standard (1.536) ... 152s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 152s No schema files found: doing nothing. 152s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 152s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 152s Setting up openssl (3.0.13-0ubuntu1) ... 152s Setting up readline-common (8.2-3.1) ... 152s Processing triggers for man-db (2.12.0-3) ... 153s Processing triggers for install-info (7.1-3) ... 153s Processing triggers for libc-bin (2.39-0ubuntu2) ... 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 154s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 155s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 155s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 155s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 155s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 156s Reading package lists... 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 157s Calculating upgrade... 157s The following packages have been kept back: 157s curl 157s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 157s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 161s autopkgtest [17:42:18]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 161s autopkgtest [17:42:18]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-progeny 163s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-progeny 1.24.0+ds-1 (dsc) [2213 B] 163s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-progeny 1.24.0+ds-1 (tar) [9768 kB] 163s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-progeny 1.24.0+ds-1 (diff) [3620 B] 164s gpgv: Signature made Thu Nov 30 07:58:53 2023 UTC 164s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 164s gpgv: issuer "tillea@rki.de" 164s gpgv: Can't check signature: No public key 164s dpkg-source: warning: cannot verify inline signature for ./r-bioc-progeny_1.24.0+ds-1.dsc: no acceptable signature found 164s autopkgtest [17:42:21]: testing package r-bioc-progeny version 1.24.0+ds-1 166s autopkgtest [17:42:23]: build not needed 169s autopkgtest [17:42:26]: test pkg-r-autopkgtest: preparing testbed 172s Reading package lists... 172s Building dependency tree... 172s Reading state information... 172s Starting pkgProblemResolver with broken count: 0 172s Starting 2 pkgProblemResolver with broken count: 0 172s Done 173s The following additional packages will be installed: 173s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 173s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 173s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 173s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 173s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 173s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 173s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 173s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libboost-dev 173s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 173s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 173s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 173s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 173s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 173s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 173s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 173s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 173s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 173s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 173s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 173s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 173s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 173s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 173s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 173s libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 173s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 173s libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 173s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 173s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 173s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 173s pkgconf-bin r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 173s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocparallel 173s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-decoupler 173s r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 173s r-bioc-genomeinfodbdata r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 173s r-bioc-matrixgenerics r-bioc-progeny r-bioc-s4arrays r-bioc-s4vectors 173s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 173s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-backports 173s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 173s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 173s r-cran-bslib r-cran-cachem r-cran-callr r-cran-catools r-cran-cellranger 173s r-cran-cli r-cran-clipr r-cran-cluster r-cran-codetools r-cran-colorspace 173s r-cran-colourpicker r-cran-commonmark r-cran-cowplot r-cran-cpp11 173s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table r-cran-dbi 173s r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-diffobj r-cran-digest 173s r-cran-dotcall64 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-evaluate 173s r-cran-fansi r-cran-farver r-cran-fastdummies r-cran-fastmap r-cran-filelock 173s r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-formatr r-cran-fs 173s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 173s r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges 173s r-cran-globals r-cran-glue r-cran-goftest r-cran-gplots r-cran-gridextra 173s r-cran-gtable r-cran-gtools r-cran-here r-cran-highr r-cran-hms 173s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 173s r-cran-igraph r-cran-irlba r-cran-isoband r-cran-jquerylib r-cran-jsonlite 173s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 173s r-cran-lattice r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 173s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-magrittr r-cran-mass 173s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 173s r-cran-miniui r-cran-munsell r-cran-nlme r-cran-openssl r-cran-parallelly 173s r-cran-patchwork r-cran-pbapply r-cran-pheatmap r-cran-pillar 173s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 173s r-cran-plogr r-cran-plotly r-cran-plyr r-cran-png r-cran-polyclip 173s r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 173s r-cran-progressr r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 173s r-cran-rann r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy 173s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress 173s r-cran-rcpptoml r-cran-rcurl r-cran-readr r-cran-readxl r-cran-rematch 173s r-cran-rematch2 r-cran-reshape2 r-cran-reticulate r-cran-rlang 173s r-cran-rmarkdown r-cran-rocr r-cran-rprojroot r-cran-rspectra r-cran-rsqlite 173s r-cran-rtsne r-cran-sass r-cran-scales r-cran-scattermore r-cran-sctransform 173s r-cran-seurat r-cran-seuratobject r-cran-shiny r-cran-shinyjs r-cran-sitmo 173s r-cran-snow r-cran-sourcetools r-cran-sp r-cran-spam r-cran-spatstat.data 173s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 173s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stringi r-cran-stringr 173s r-cran-survival r-cran-sys r-cran-tensor r-cran-testthat r-cran-tibble 173s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 173s r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo 173s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 173s r-cran-zoo rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 173s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 173s zlib1g-dev 173s Suggested packages: 173s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 173s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 173s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 173s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 173s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 173s libboost-context1.83-dev libboost-contract1.83-dev 173s libboost-coroutine1.83-dev libboost-date-time1.83-dev 173s libboost-exception1.83-dev libboost-fiber1.83-dev 173s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 173s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 173s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 173s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 173s libboost-numpy1.83-dev libboost-program-options1.83-dev 173s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 173s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 173s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 173s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 173s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 173s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 173s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 173s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 173s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 173s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 173s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 173s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 173s r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all 173s r-bioc-rtracklayer r-bioc-rsamtools r-bioc-affy r-bioc-annotate 173s r-cran-foreach r-cran-bbmisc r-cran-doparallel r-bioc-variantannotation 173s r-bioc-genomicalignments r-bioc-shortread r-cran-batchtools r-cran-mockery 173s r-cran-webmockr r-bioc-bsgenome r-bioc-genomicfeatures r-cran-glmnet 173s r-bioc-gsva r-cran-rpart r-cran-ranger r-cran-covr r-cran-pkgdown 173s r-cran-roxygen2 r-cran-sessioninfo r-bioc-hdf5array r-bioc-genefilter 173s r-cran-lobstr r-bioc-delayedmatrixstats r-bioc-tximport r-bioc-tximeta 173s r-bioc-tximportdata r-bioc-glmgampoi r-cran-r.utils r-bioc-gviz 173s r-bioc-annotationhub r-bioc-dexseq r-bioc-edger r-cran-markdown 173s r-bioc-sparsematrixstats r-bioc-scrnaseq r-bioc-rhdf5 r-cran-ff r-cran-aer 173s r-cran-bbmle r-cran-boot r-cran-car r-cran-cardata r-cran-caret 173s r-cran-cmprsk r-cran-coda r-cran-e1071 r-cran-emmeans r-cran-epir r-cran-gam 173s r-cran-gee r-cran-geepack r-cran-gmm r-cran-hmisc r-cran-interp r-cran-ks 173s r-cran-lavaan r-cran-leaps r-cran-lme4 r-cran-lsmeans r-cran-maps 173s r-cran-mclust r-cran-metafor r-cran-modeldata r-cran-multcomp r-cran-network 173s r-cran-nnet r-cran-ordinal r-cran-plm r-cran-psych r-cran-quantreg 173s r-cran-robust r-cran-robustbase r-cran-rsample r-cran-sandwich r-cran-spdep 173s r-cran-spatialreg r-cran-spelling r-cran-survey r-cran-systemfit 173s r-cran-tseries r-cran-rstudioapi r-cran-kernlab r-cran-mvtnorm r-cran-vcd 173s r-cran-jpeg r-cran-viridis r-cran-rmysql r-cran-uuid r-cran-lubridate 173s r-cran-magick r-cran-sf r-cran-getopt r-cran-formattable r-cran-nanotime 173s r-cran-palmerpenguins r-cran-units r-cran-vdiffr r-cran-inline 173s r-cran-devtools r-cran-tinytest r-cran-rmpi r-cran-rlecuyer 173s r-cran-spatstat.model r-cran-spatstat.linnet r-cran-bench debhelper 173s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec 173s texlive-binaries-sse2 hintview texlive-latex-base-doc wp2latex 173s Recommended packages: 173s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 173s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 173s r-cran-rstudioapi r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot 173s r-cran-covr r-cran-thematic r-cran-cliapp r-cran-mockery r-cran-whoami 173s r-cran-cairo r-cran-forcats r-cran-gridgraphics r-cran-magick r-cran-maps 173s r-cran-ragg r-cran-vdiffr r-cran-venndiagram r-cran-bench r-cran-decor 173s r-cran-lobstr r-cran-spelling r-cran-webutils r-cran-r.utils r-cran-xts 173s r-cran-nanotime r-cran-rpostgresql r-cran-gh r-cran-rhpcblasctl 173s r-cran-roxygen2 r-cran-rmysql r-cran-mvtnorm libpcg-cpp-dev r-cran-unitizer 173s r-cran-rgenoud r-cran-actuar r-cran-rsvg r-cran-r.rsp r-cran-markdown 173s r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-multcomp r-cran-profvis 173s r-cran-quantreg r-cran-rpart r-cran-sf r-cran-svglite r-cran-devtools 173s r-cran-ggbeeswarm r-cran-jpeg r-cran-ape r-bioc-graph r-cran-rgl 173s r-cran-gridsvg r-cran-tikzdevice node-highlight.js r-cran-network 173s r-cran-qpdf r-cran-lintr r-cran-tidyverse r-cran-r.devices r-cran-sodium 173s r-cran-lubridate r-cran-mathjaxr r-cran-mockr r-cran-ggthemes r-cran-ggally 173s r-cran-ggalluvial r-cran-dendextend r-cran-irdisplay r-cran-palmerpenguins 173s r-cran-rversions r-cran-doparallel r-cran-foreach r-cran-iterators 173s r-cran-itertools r-cran-webfakes r-cran-pbmcapply r-cran-furrr r-cran-pingr 173s r-cran-tinytest r-cran-usethis r-cran-dygraphs r-cran-dbitest r-cran-gert 173s r-cran-rvest r-cran-dichromat r-cran-rsvd r-cran-hdf5r r-bioc-rtracklayer 173s r-bioc-monocle r-cran-vgam r-bioc-limma r-cran-metap r-cran-mixtools 173s r-cran-ggrastr r-cran-gstat r-cran-terra r-cran-raster r-cran-fields 173s r-cran-truncdist r-cran-sm r-cran-gsl r-cran-spatial r-cran-spatstat.linnet 173s r-cran-spatstat.model r-cran-spatstat r-cran-formattable r-cran-pkgdown 173s r-cran-zeallot r-cran-renv r-cran-runit lmodern dvisvgm 173s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 173s x11-xserver-utils 173s The following packages will be REMOVED: 173s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 173s The following NEW packages will be installed: 173s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 173s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 173s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 173s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 173s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 173s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 173s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 173s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 173s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 173s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 173s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 173s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 173s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 173s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 173s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 173s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 173s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 173s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 173s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 173s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 173s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 173s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 173s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpotrace0 libpsl5t64 173s libptexenc1 libreadline-dev libreadline8t64 libsharpyuv0 libsm6 173s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 173s libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 173s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 173s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 173s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 173s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 173s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 173s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings 173s r-bioc-decoupler r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 173s r-bioc-genomeinfodbdata r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 173s r-bioc-matrixgenerics r-bioc-progeny r-bioc-s4arrays r-bioc-s4vectors 173s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 173s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-backports 173s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 173s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 173s r-cran-bslib r-cran-cachem r-cran-callr r-cran-catools r-cran-cellranger 173s r-cran-cli r-cran-clipr r-cran-cluster r-cran-codetools r-cran-colorspace 173s r-cran-colourpicker r-cran-commonmark r-cran-cowplot r-cran-cpp11 173s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table r-cran-dbi 173s r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-diffobj r-cran-digest 173s r-cran-dotcall64 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-evaluate 173s r-cran-fansi r-cran-farver r-cran-fastdummies r-cran-fastmap r-cran-filelock 173s r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-formatr r-cran-fs 173s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 173s r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges 173s r-cran-globals r-cran-glue r-cran-goftest r-cran-gplots r-cran-gridextra 173s r-cran-gtable r-cran-gtools r-cran-here r-cran-highr r-cran-hms 173s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 173s r-cran-igraph r-cran-irlba r-cran-isoband r-cran-jquerylib r-cran-jsonlite 173s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 173s r-cran-lattice r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 173s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-magrittr r-cran-mass 173s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 173s r-cran-miniui r-cran-munsell r-cran-nlme r-cran-openssl r-cran-parallelly 173s r-cran-patchwork r-cran-pbapply r-cran-pheatmap r-cran-pillar 173s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 173s r-cran-plogr r-cran-plotly r-cran-plyr r-cran-png r-cran-polyclip 173s r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 173s r-cran-progressr r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 173s r-cran-rann r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy 173s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress 173s r-cran-rcpptoml r-cran-rcurl r-cran-readr r-cran-readxl r-cran-rematch 173s r-cran-rematch2 r-cran-reshape2 r-cran-reticulate r-cran-rlang 173s r-cran-rmarkdown r-cran-rocr r-cran-rprojroot r-cran-rspectra r-cran-rsqlite 173s r-cran-rtsne r-cran-sass r-cran-scales r-cran-scattermore r-cran-sctransform 173s r-cran-seurat r-cran-seuratobject r-cran-shiny r-cran-shinyjs r-cran-sitmo 173s r-cran-snow r-cran-sourcetools r-cran-sp r-cran-spam r-cran-spatstat.data 173s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 173s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stringi r-cran-stringr 173s r-cran-survival r-cran-sys r-cran-tensor r-cran-testthat r-cran-tibble 173s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 173s r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo 173s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 173s r-cran-zoo rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 173s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 173s zlib1g-dev 173s The following packages will be upgraded: 173s curl 173s 1 upgraded, 383 newly installed, 5 to remove and 0 not upgraded. 173s Need to get 505 MB/505 MB of archives. 173s After this operation, 1488 MB of additional disk space will be used. 173s Get:1 /tmp/autopkgtest.ZqTlXI/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [836 B] 173s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 174s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 174s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 174s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 174s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 174s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 174s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 174s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 174s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 174s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 174s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 174s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 174s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 174s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 174s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 174s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 174s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 174s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 174s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 174s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 174s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 174s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 174s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 174s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 174s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 174s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 174s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 174s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 174s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 175s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 175s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 175s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 175s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 175s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 175s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 175s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 175s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 175s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 175s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 175s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 175s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 175s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 175s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 175s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 175s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 175s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 175s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 175s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 175s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 176s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 176s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 176s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 176s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 176s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 176s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 176s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 176s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 176s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 176s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 176s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 176s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 176s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 176s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 176s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 176s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 176s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 176s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 176s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 176s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 176s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 176s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 176s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 176s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 176s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 176s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 176s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 176s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 177s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 177s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 177s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 177s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 177s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 177s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 177s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 177s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 177s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 177s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 177s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 177s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 177s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 177s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 177s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 177s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 177s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 177s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 177s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 177s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 177s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 177s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 177s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 177s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 177s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 177s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 177s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 177s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 177s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 177s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 177s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 177s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 177s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 177s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 177s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 178s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 178s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 178s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 178s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 178s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 178s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 178s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 178s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 178s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 178s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 178s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 178s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 178s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 178s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 178s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 178s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 178s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 178s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 178s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 178s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 178s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 178s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 178s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 178s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 178s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 178s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 178s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 178s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 178s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 178s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 179s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 179s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 179s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 179s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 179s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 179s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 179s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 180s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 180s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 180s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 180s Get:154 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 180s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 180s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 180s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 180s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 180s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 180s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 180s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 180s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 180s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 180s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 180s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 180s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 180s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 180s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 180s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 180s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 180s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 180s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 180s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 180s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 180s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 180s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 180s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 180s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 180s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 180s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 180s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 180s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 180s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 180s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 180s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 180s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 180s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 180s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 180s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 180s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 181s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 181s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 181s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 182s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 182s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 183s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 183s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 183s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 183s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 183s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 183s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 183s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 183s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 183s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 183s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 183s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 183s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 183s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 183s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 183s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 183s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 183s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 183s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 183s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 183s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 183s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 183s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 183s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 183s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 183s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 183s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 183s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 183s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 184s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 184s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 184s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 184s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 184s Get:228 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 184s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 184s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 184s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 184s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 184s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 184s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 184s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 184s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 184s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 184s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 184s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 184s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 184s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 184s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 184s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 184s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 184s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 184s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 184s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 184s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 184s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 184s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 184s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 184s Get:252 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 184s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 185s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 185s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 185s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 188s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 188s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 188s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 188s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 188s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 188s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 188s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 188s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-backports arm64 1.4.1-1 [101 kB] 188s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 188s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 188s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 189s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-decoupler all 2.8.0+dfsg-2 [2029 kB] 189s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 189s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 189s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 189s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 189s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 189s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 189s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 189s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 189s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-locfit arm64 1.5-9.8-1 [507 kB] 189s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 189s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 189s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 189s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB] 189s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 189s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-farver arm64 2.1.1-1 [1336 kB] 189s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 189s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 189s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-munsell all 0.5.0-2build1 [208 kB] 189s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 189s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 189s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 189s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 189s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpparmadillo arm64 0.12.8.0.0-1 [859 kB] 189s Get:292 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-deseq2 arm64 1.42.0+dfsg-1 [1218 kB] 189s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggrepel arm64 0.9.5-1 [250 kB] 189s Get:294 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 190s Get:295 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 190s Get:296 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB] 190s Get:297 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-progeny all 1.24.0+ds-1 [8872 kB] 190s Get:298 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-singlecellexperiment all 1.24.0+ds-1 [828 kB] 190s Get:299 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 190s Get:300 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 190s Get:301 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 190s Get:302 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 190s Get:303 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-catools arm64 1.18.2-1 [200 kB] 190s Get:304 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch all 2.0.0-1 [18.3 kB] 190s Get:305 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cellranger all 1.1.0-3 [102 kB] 190s Get:306 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-clipr all 0.8.0-1 [53.5 kB] 190s Get:307 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cluster arm64 2.1.6-1 [552 kB] 191s Get:308 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 191s Get:309 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 191s Get:310 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shinyjs all 2.1.0-1 [967 kB] 191s Get:311 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 191s Get:312 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 191s Get:313 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 191s Get:314 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 191s Get:315 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-data.table arm64 1.14.10+dfsg-1 [1844 kB] 191s Get:316 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-deldir arm64 2.0-4-1 [270 kB] 191s Get:317 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 191s Get:318 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 191s Get:319 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dotcall64 arm64 1.1-1-1 [38.5 kB] 191s Get:320 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sitmo arm64 2.0.2-1 [129 kB] 191s Get:321 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dqrng arm64 0.3.2+dfsg-1 [157 kB] 191s Get:322 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastdummies all 1.7.3-2 [49.9 kB] 191s Get:323 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 191s Get:324 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fitdistrplus all 1.1-11-1 [1902 kB] 191s Get:325 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fnn arm64 1.1.4-1 [121 kB] 191s Get:326 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-globals all 0.16.2-1 [117 kB] 191s Get:327 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 191s Get:328 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-parallelly arm64 1.37.1-1 [364 kB] 191s Get:329 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-future all 1.33.1+dfsg-1 [634 kB] 191s Get:330 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-future.apply all 1.11.1+dfsg-1 [171 kB] 191s Get:331 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtools arm64 3.9.5-1 [340 kB] 191s Get:332 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gdata all 3.0.0-1 [483 kB] 191s Get:333 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggridges all 0.5.6-1 [2195 kB] 191s Get:334 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB] 191s Get:335 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-kernsmooth arm64 2.23-22-1 [91.1 kB] 191s Get:336 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gplots all 3.1.3.1-1 [589 kB] 191s Get:337 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 191s Get:338 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-here all 1.0.1-2 [50.3 kB] 191s Get:339 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ica all 1.0-3-1 [85.4 kB] 191s Get:340 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-igraph arm64 1.6.0-1 [4329 kB] 192s Get:341 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-irlba arm64 2.3.5.1-2 [293 kB] 192s Get:342 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpptoml arm64 0.2.2+dfsg-1 [106 kB] 192s Get:343 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-reticulate arm64 1.35.0+dfsg-1 [1183 kB] 192s Get:344 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 192s Get:345 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB] 192s Get:346 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB] 192s Get:347 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-patchwork all 1.2.0-1 [3161 kB] 192s Get:348 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 192s Get:349 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 192s Get:350 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 192s Get:351 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 192s Get:352 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 192s Get:353 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-polyclip arm64 1.10-6-1 [110 kB] 192s Get:354 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 192s Get:355 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progressr all 0.14.0-1 [338 kB] 192s Get:356 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rann arm64 2.6.1-1build2 [39.8 kB] 192s Get:357 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcppannoy arm64 0.0.22-1 [231 kB] 192s Get:358 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcppeigen arm64 0.3.3.9.4-1 [1180 kB] 192s Get:359 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpphnsw arm64 0.5.0+ds-1 [168 kB] 192s Get:360 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 192s Get:361 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 192s Get:362 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vroom arm64 1.6.5-1 [832 kB] 192s Get:363 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-readr arm64 2.1.5-1 [756 kB] 192s Get:364 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-readxl arm64 1.4.3-1 [726 kB] 192s Get:365 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 192s Get:366 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rocr all 1.0-11-2build1 [446 kB] 192s Get:367 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rspectra arm64 0.16-1-1 [391 kB] 192s Get:368 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rtsne arm64 0.17-1 [105 kB] 192s Get:369 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scattermore arm64 1.2-1 [329 kB] 192s Get:370 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sctransform arm64 0.4.1-1 [496 kB] 192s Get:371 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sp arm64 1:2.1-2+dfsg-1 [1448 kB] 192s Get:372 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spam arm64 2.10-0-1 [2759 kB] 192s Get:373 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-seuratobject arm64 5.0.1-1 [1731 kB] 192s Get:374 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.utils arm64 3.0-4-1 [360 kB] 192s Get:375 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.data all 3.0-4-1 [4090 kB] 192s Get:376 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.geom arm64 3.2-8-1 [3805 kB] 193s Get:377 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.random arm64 3.2-2-1 [1127 kB] 193s Get:378 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB] 193s Get:379 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.sparse arm64 3.0-3-1 [214 kB] 193s Get:380 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-spatstat.explore arm64 3.2-5-1 [3264 kB] 193s Get:381 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-uwot arm64 0.1.16-2 [596 kB] 193s Get:382 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-seurat arm64 5.0.1-1 [3530 kB] 193s Get:383 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 193s Get:384 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 196s Preconfiguring packages ... 196s Fetched 505 MB in 20s (25.5 MB/s) 196s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 196s wget depends on libpsl5 (>= 0.16.0). 196s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 196s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 196s 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 196s Removing libpsl5:arm64 (0.21.2-1build1) ... 196s Selecting previously unselected package libpsl5t64:arm64. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 196s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 196s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 196s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 196s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 196s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 196s Selecting previously unselected package libcurl4t64:arm64. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 196s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 196s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 196s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 196s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 196s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 196s 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 196s Removing libpng16-16:arm64 (1.6.43-1) ... 196s Selecting previously unselected package libpng16-16t64:arm64. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 196s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 196s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 196s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 196s parted depends on libreadline8 (>= 6.0). 196s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 196s gpgsm depends on libreadline8 (>= 6.0). 196s gpgconf depends on libreadline8 (>= 6.0). 196s gpg depends on libreadline8 (>= 6.0). 196s gawk depends on libreadline8 (>= 6.0). 196s fdisk depends on libreadline8 (>= 6.0). 196s 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 196s Removing libreadline8:arm64 (8.2-3) ... 196s Selecting previously unselected package libreadline8t64:arm64. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 196s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 197s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 197s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 197s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 197s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 197s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 197s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 197s lsof depends on libtirpc3 (>= 1.0.2). 197s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 197s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 197s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 197s iproute2 depends on libtirpc3 (>= 1.0.2). 197s 197s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 197s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 197s Selecting previously unselected package libtirpc3t64:arm64. 197s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 197s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 197s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 197s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 197s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 197s Selecting previously unselected package libc-dev-bin. 197s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 197s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 197s Selecting previously unselected package linux-libc-dev:arm64. 197s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 197s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 197s Selecting previously unselected package libcrypt-dev:arm64. 197s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 197s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 197s Selecting previously unselected package libtirpc-dev:arm64. 197s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 197s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 197s Selecting previously unselected package libnsl-dev:arm64. 197s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 197s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 197s Selecting previously unselected package rpcsvc-proto. 197s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 197s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 197s Selecting previously unselected package libc6-dev:arm64. 197s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 197s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 198s Selecting previously unselected package libisl23:arm64. 198s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 198s Unpacking libisl23:arm64 (0.26-3) ... 198s Selecting previously unselected package libmpc3:arm64. 198s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 198s Unpacking libmpc3:arm64 (1.3.1-1) ... 198s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 198s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 198s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 198s Selecting previously unselected package cpp-13. 198s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 198s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 198s Selecting previously unselected package cpp-aarch64-linux-gnu. 198s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 198s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 199s Selecting previously unselected package cpp. 199s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 199s Unpacking cpp (4:13.2.0-7ubuntu1) ... 199s Selecting previously unselected package libcc1-0:arm64. 199s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libgomp1:arm64. 199s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libitm1:arm64. 199s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libatomic1:arm64. 199s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libasan8:arm64. 199s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package liblsan0:arm64. 199s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libtsan2:arm64. 199s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libubsan1:arm64. 199s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libhwasan0:arm64. 199s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 199s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 199s Selecting previously unselected package libgcc-13-dev:arm64. 199s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 199s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 199s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 199s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 199s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 200s Selecting previously unselected package gcc-13. 200s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 200s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 200s Selecting previously unselected package gcc-aarch64-linux-gnu. 200s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 200s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 200s Selecting previously unselected package gcc. 200s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 200s Unpacking gcc (4:13.2.0-7ubuntu1) ... 200s Selecting previously unselected package libstdc++-13-dev:arm64. 200s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 200s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 200s Selecting previously unselected package g++-13-aarch64-linux-gnu. 200s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 200s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 201s Selecting previously unselected package g++-13. 201s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 201s Unpacking g++-13 (13.2.0-17ubuntu2) ... 201s Selecting previously unselected package g++-aarch64-linux-gnu. 201s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 201s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 201s Selecting previously unselected package g++. 201s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 201s Unpacking g++ (4:13.2.0-7ubuntu1) ... 201s Selecting previously unselected package build-essential. 201s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 201s Unpacking build-essential (12.10ubuntu1) ... 201s Selecting previously unselected package dctrl-tools. 201s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 201s Unpacking dctrl-tools (2.24-3build2) ... 201s Selecting previously unselected package fonts-dejavu-mono. 201s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 201s Unpacking fonts-dejavu-mono (2.37-8) ... 201s Selecting previously unselected package fonts-dejavu-core. 201s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 201s Unpacking fonts-dejavu-core (2.37-8) ... 201s Selecting previously unselected package fontconfig-config. 201s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 201s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 201s Selecting previously unselected package libfontconfig1:arm64. 201s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 201s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 201s Selecting previously unselected package fontconfig. 201s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 201s Unpacking fontconfig (2.15.0-1ubuntu1) ... 201s Selecting previously unselected package fonts-font-awesome. 202s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 202s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 202s Selecting previously unselected package fonts-glyphicons-halflings. 202s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 202s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 202s Selecting previously unselected package fonts-lmodern. 202s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 202s Unpacking fonts-lmodern (2.005-1) ... 202s Selecting previously unselected package fonts-mathjax. 202s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 202s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 202s Selecting previously unselected package libgfortran5:arm64. 202s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 202s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 202s Selecting previously unselected package libgfortran-13-dev:arm64. 202s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 202s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 202s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 202s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 202s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 203s Selecting previously unselected package gfortran-13. 203s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 203s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 203s Selecting previously unselected package gfortran-aarch64-linux-gnu. 203s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 203s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 203s Selecting previously unselected package gfortran. 203s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 203s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 203s Selecting previously unselected package icu-devtools. 203s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 203s Unpacking icu-devtools (74.2-1ubuntu1) ... 203s Selecting previously unselected package javascript-common. 203s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 203s Unpacking javascript-common (11+nmu1) ... 203s Selecting previously unselected package libio-string-perl. 203s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 203s Unpacking libio-string-perl (1.08-4) ... 203s Selecting previously unselected package liblatex-tounicode-perl. 203s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 203s Unpacking liblatex-tounicode-perl (0.54-2) ... 203s Selecting previously unselected package libbibtex-parser-perl. 203s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 203s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 203s Selecting previously unselected package libblas3:arm64. 203s Preparing to unpack .../055-libblas3_3.12.0-3_arm64.deb ... 203s Unpacking libblas3:arm64 (3.12.0-3) ... 204s Selecting previously unselected package libblas-dev:arm64. 204s Preparing to unpack .../056-libblas-dev_3.12.0-3_arm64.deb ... 204s Unpacking libblas-dev:arm64 (3.12.0-3) ... 204s Selecting previously unselected package libboost1.83-dev:arm64. 205s Preparing to unpack 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... 208s Unpacking libxcb-shm0:arm64 (1.15-1) ... 208s Selecting previously unselected package libxrender1:arm64. 208s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 208s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 209s Selecting previously unselected package libcairo2:arm64. 209s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 209s Unpacking libcairo2:arm64 (1.18.0-1) ... 209s Selecting previously unselected package libdatrie1:arm64. 209s Preparing to unpack .../065-libdatrie1_0.2.13-3_arm64.deb ... 209s Unpacking libdatrie1:arm64 (0.2.13-3) ... 209s Selecting previously unselected package libdeflate0:arm64. 209s Preparing to unpack .../066-libdeflate0_1.19-1_arm64.deb ... 209s Unpacking libdeflate0:arm64 (1.19-1) ... 209s Selecting previously unselected package libgraphite2-3:arm64. 209s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_arm64.deb ... 209s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 209s Selecting previously unselected package libharfbuzz0b:arm64. 209s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_arm64.deb ... 209s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 209s Selecting previously unselected package x11-common. 209s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 209s Unpacking x11-common (1:7.7+23ubuntu2) ... 209s Selecting previously unselected package libice6:arm64. 209s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_arm64.deb ... 209s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 210s Selecting previously unselected package libicu-dev:arm64. 210s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_arm64.deb ... 210s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 211s Selecting previously unselected package libjpeg-turbo8:arm64. 211s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 211s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 211s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 211s Preparing to unpack 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package libjs-jquery-datatables. 212s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 212s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 212s Selecting previously unselected package libjs-sifter.js. 212s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 212s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 212s Selecting previously unselected package libjs-microplugin.js. 212s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 212s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 212s Selecting previously unselected package libjs-jquery-selectize.js. 212s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 212s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 212s Selecting previously unselected package libjs-jquery-ui. 213s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 213s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 213s Selecting previously unselected package libjs-json. 213s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 213s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 213s Selecting previously unselected package libjs-lunr. 213s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 213s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 213s Selecting previously unselected package libjs-prettify. 213s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 213s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 213s Selecting previously unselected package libkpathsea6:arm64. 213s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 213s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 213s Selecting previously unselected package liblapack3:arm64. 213s Preparing to unpack .../093-liblapack3_3.12.0-3_arm64.deb ... 213s Unpacking liblapack3:arm64 (3.12.0-3) ... 213s Selecting previously unselected package liblapack-dev:arm64. 213s Preparing to unpack .../094-liblapack-dev_3.12.0-3_arm64.deb ... 213s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 213s Selecting previously unselected package liblerc4:arm64. 213s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 213s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 213s Selecting previously unselected package liblua5.4-0:arm64. 213s Preparing to unpack .../096-liblua5.4-0_5.4.6-3_arm64.deb ... 213s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 213s Selecting previously unselected package libncurses-dev:arm64. 213s Preparing to unpack .../097-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 213s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 213s Selecting previously unselected package libthai-data. 213s Preparing to unpack .../098-libthai-data_0.1.29-2_all.deb ... 213s Unpacking libthai-data (0.1.29-2) ... 213s Selecting previously unselected package libthai0:arm64. 213s Preparing to unpack .../099-libthai0_0.1.29-2_arm64.deb ... 213s Unpacking libthai0:arm64 (0.1.29-2) ... 213s Selecting previously unselected package libpango-1.0-0:arm64. 213s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 213s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 213s Selecting previously unselected package libpangoft2-1.0-0:arm64. 213s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 213s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 213s Selecting previously unselected package libpangocairo-1.0-0:arm64. 213s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 213s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 213s Selecting previously unselected package libpaper1:arm64. 214s Preparing to unpack .../103-libpaper1_1.1.29_arm64.deb ... 214s Unpacking libpaper1:arm64 (1.1.29) ... 214s Selecting previously unselected package libpaper-utils. 214s Preparing to unpack .../104-libpaper-utils_1.1.29_arm64.deb ... 214s Unpacking libpaper-utils (1.1.29) ... 214s 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unselected package zlib1g-dev:arm64. 214s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 214s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 214s Selecting previously unselected package libpng-dev:arm64. 214s Preparing to unpack .../111-libpng-dev_1.6.43-3_arm64.deb ... 214s Unpacking libpng-dev:arm64 (1.6.43-3) ... 214s Selecting previously unselected package libpotrace0:arm64. 214s Preparing to unpack .../112-libpotrace0_1.16-2_arm64.deb ... 214s Unpacking libpotrace0:arm64 (1.16-2) ... 214s Selecting previously unselected package libptexenc1:arm64. 214s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_arm64.deb ... 214s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 214s Selecting previously unselected package libreadline-dev:arm64. 214s Preparing to unpack .../114-libreadline-dev_8.2-3.1_arm64.deb ... 214s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 214s Selecting previously unselected package libsharpyuv0:arm64. 214s Preparing to unpack .../115-libsharpyuv0_1.3.2-0.4_arm64.deb ... 214s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 214s Selecting previously unselected package libsm6:arm64. 215s Preparing to unpack .../116-libsm6_2%3a1.2.3-1build2_arm64.deb ... 215s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 215s Selecting previously unselected package libsynctex2:arm64. 215s Preparing to unpack .../117-libsynctex2_2023.20230311.66589-9_arm64.deb ... 215s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 215s Selecting previously unselected package libtcl8.6:arm64. 215s Preparing to unpack .../118-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 215s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 215s Selecting previously unselected package libteckit0:arm64. 215s Preparing to unpack .../119-libteckit0_2.5.12+ds1-1_arm64.deb ... 215s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 215s Selecting previously unselected package libtexlua53-5:arm64. 215s Preparing to unpack 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libxss1:arm64 (1:1.2.3-1build2) ... 215s Selecting previously unselected package libtk8.6:arm64. 215s Preparing to unpack .../126-libtk8.6_8.6.13-2_arm64.deb ... 215s Unpacking libtk8.6:arm64 (8.6.13-2) ... 215s Selecting previously unselected package libxt6t64:arm64. 215s Preparing to unpack .../127-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 215s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 215s Selecting previously unselected package libxmu6:arm64. 215s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_arm64.deb ... 215s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 215s Selecting previously unselected package libxpm4:arm64. 216s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_arm64.deb ... 216s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 216s Selecting previously unselected package libxaw7:arm64. 216s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_arm64.deb ... 216s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 216s Selecting previously unselected package libxi6:arm64. 216s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_arm64.deb ... 216s Unpacking libxi6:arm64 (2:1.8.1-1) ... 216s Selecting previously unselected package libzzip-0-13:arm64. 216s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 216s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 216s Selecting previously unselected package zip. 216s Preparing to unpack .../133-zip_3.0-13_arm64.deb ... 216s Unpacking zip (3.0-13) ... 216s Selecting previously unselected package unzip. 216s Preparing to unpack .../134-unzip_6.0-28ubuntu3_arm64.deb ... 216s Unpacking unzip (6.0-28ubuntu3) ... 216s Selecting previously unselected package xdg-utils. 216s Preparing to unpack .../135-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 216s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 216s Selecting previously unselected package r-base-core. 216s Preparing to unpack .../136-r-base-core_4.3.3-2build1_arm64.deb ... 216s Unpacking r-base-core (4.3.3-2build1) ... 216s Selecting previously unselected package r-cran-littler. 216s Preparing to unpack .../137-r-cran-littler_0.3.19-1_arm64.deb ... 216s Unpacking r-cran-littler (0.3.19-1) ... 217s Selecting previously unselected package littler. 217s Preparing to unpack .../138-littler_0.3.19-1_all.deb ... 217s Unpacking littler (0.3.19-1) ... 217s Selecting previously unselected package node-bootstrap-sass. 217s Preparing to unpack .../139-node-bootstrap-sass_3.4.3-2_all.deb ... 217s Unpacking node-bootstrap-sass (3.4.3-2) ... 217s Selecting previously unselected package node-html5shiv. 217s Preparing to unpack .../140-node-html5shiv_3.7.3+dfsg-5_all.deb ... 217s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 217s Selecting previously unselected package node-normalize.css. 217s Preparing to unpack .../141-node-normalize.css_8.0.1-5_all.deb ... 217s Unpacking node-normalize.css (8.0.1-5) ... 217s Selecting previously unselected package pandoc-data. 217s Preparing to unpack .../142-pandoc-data_3.1.3-1_all.deb ... 217s Unpacking pandoc-data (3.1.3-1) ... 217s Selecting previously unselected package pandoc. 217s Preparing to unpack .../143-pandoc_3.1.3+ds-2_arm64.deb ... 217s Unpacking pandoc (3.1.3+ds-2) ... 218s Selecting previously unselected package pkgconf-bin. 218s Preparing to unpack .../144-pkgconf-bin_1.8.1-2_arm64.deb ... 218s Unpacking pkgconf-bin (1.8.1-2) ... 218s Selecting previously unselected package pkgconf:arm64. 218s Preparing to unpack .../145-pkgconf_1.8.1-2_arm64.deb ... 218s Unpacking pkgconf:arm64 (1.8.1-2) ... 218s Selecting previously unselected package pkg-config:arm64. 218s Preparing to unpack .../146-pkg-config_1.8.1-2_arm64.deb ... 218s Unpacking pkg-config:arm64 (1.8.1-2) ... 218s Selecting previously unselected package liblzma-dev:arm64. 218s Preparing to unpack .../147-liblzma-dev_5.4.5-0.3_arm64.deb ... 218s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 218s Selecting previously unselected package r-base-dev. 218s Preparing to unpack .../148-r-base-dev_4.3.3-2build1_all.deb ... 218s Unpacking r-base-dev (4.3.3-2build1) ... 218s Selecting previously unselected package pkg-r-autopkgtest. 218s Preparing to unpack .../149-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 218s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 218s Selecting previously unselected package r-bioc-biocgenerics. 218s Preparing to unpack .../150-r-bioc-biocgenerics_0.48.1-2_all.deb ... 218s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 218s Selecting previously unselected package r-bioc-biobase. 218s Preparing to unpack .../151-r-bioc-biobase_2.62.0-1_arm64.deb ... 218s Unpacking r-bioc-biobase (2.62.0-1) ... 218s Selecting previously unselected package r-bioc-s4vectors. 219s Preparing to unpack .../152-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 219s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 219s Selecting previously unselected package r-bioc-iranges. 219s Preparing to unpack .../153-r-bioc-iranges_2.36.0-1_arm64.deb ... 219s Unpacking r-bioc-iranges (2.36.0-1) ... 219s Selecting previously unselected package r-cran-dbi. 219s Preparing to unpack .../154-r-cran-dbi_1.2.2-1_all.deb ... 219s Unpacking r-cran-dbi (1.2.2-1) ... 219s Selecting previously unselected package r-cran-bit. 219s Preparing to unpack .../155-r-cran-bit_4.0.5-1_arm64.deb ... 219s Unpacking r-cran-bit (4.0.5-1) ... 219s Selecting previously unselected package r-cran-bit64. 219s Preparing to unpack .../156-r-cran-bit64_4.0.5-1_arm64.deb ... 219s Unpacking r-cran-bit64 (4.0.5-1) ... 219s Selecting previously unselected package r-cran-rlang. 219s Preparing to unpack .../157-r-cran-rlang_1.1.3-1_arm64.deb ... 219s Unpacking r-cran-rlang (1.1.3-1) ... 219s Selecting previously unselected package r-cran-cli. 219s Preparing to unpack .../158-r-cran-cli_3.6.2-1_arm64.deb ... 219s Unpacking r-cran-cli (3.6.2-1) ... 219s Selecting previously unselected package r-cran-glue. 219s Preparing to unpack .../159-r-cran-glue_1.7.0-1_arm64.deb ... 219s Unpacking r-cran-glue (1.7.0-1) ... 219s Selecting previously unselected package r-cran-lifecycle. 219s Preparing to unpack .../160-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 219s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 219s Selecting previously unselected package r-cran-vctrs. 219s Preparing to unpack .../161-r-cran-vctrs_0.6.5-1_arm64.deb ... 219s Unpacking r-cran-vctrs (0.6.5-1) ... 220s Selecting previously unselected package r-cran-blob. 220s Preparing to unpack .../162-r-cran-blob_1.2.4-1_all.deb ... 220s Unpacking r-cran-blob (1.2.4-1) ... 220s Selecting previously unselected package r-cran-fastmap. 220s Preparing to unpack .../163-r-cran-fastmap_1.1.1-1_arm64.deb ... 220s Unpacking r-cran-fastmap (1.1.1-1) ... 220s Selecting previously unselected package r-cran-cachem. 220s Preparing to unpack .../164-r-cran-cachem_1.0.8-1_arm64.deb ... 220s Unpacking r-cran-cachem (1.0.8-1) ... 220s Selecting previously unselected package r-cran-memoise. 220s Preparing to unpack .../165-r-cran-memoise_2.0.1-1_all.deb ... 220s Unpacking r-cran-memoise (2.0.1-1) ... 220s Selecting previously unselected package r-cran-pkgconfig. 220s Preparing to unpack .../166-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 220s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 220s Selecting previously unselected package r-cran-plogr. 220s Preparing to unpack .../167-r-cran-plogr_0.2.0-3build1_all.deb ... 220s Unpacking r-cran-plogr (0.2.0-3build1) ... 220s Selecting previously unselected package r-cran-cpp11. 220s Preparing to unpack .../168-r-cran-cpp11_0.4.7-1_all.deb ... 220s Unpacking r-cran-cpp11 (0.4.7-1) ... 220s Selecting previously unselected package r-cran-rsqlite. 220s Preparing to unpack .../169-r-cran-rsqlite_2.3.4-1_arm64.deb ... 220s Unpacking r-cran-rsqlite (2.3.4-1) ... 220s Selecting previously unselected package r-cran-curl. 220s Preparing to unpack .../170-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 220s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 220s Selecting previously unselected package r-cran-jsonlite. 220s Preparing to unpack .../171-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 220s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 220s Selecting previously unselected package r-cran-mime. 220s Preparing to unpack .../172-r-cran-mime_0.12-1_arm64.deb ... 220s Unpacking r-cran-mime (0.12-1) ... 220s Selecting previously unselected package r-cran-sys. 220s Preparing to unpack .../173-r-cran-sys_3.4.2-1_arm64.deb ... 220s Unpacking r-cran-sys (3.4.2-1) ... 221s Selecting previously unselected package r-cran-askpass. 221s Preparing to unpack .../174-r-cran-askpass_1.2.0-1_arm64.deb ... 221s Unpacking r-cran-askpass (1.2.0-1) ... 221s Selecting previously unselected package r-cran-openssl. 221s Preparing to unpack .../175-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 221s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 221s Selecting previously unselected package r-cran-r6. 221s Preparing to unpack .../176-r-cran-r6_2.5.1-1_all.deb ... 221s Unpacking r-cran-r6 (2.5.1-1) ... 221s Selecting previously unselected package r-cran-httr. 221s Preparing to unpack .../177-r-cran-httr_1.4.7+dfsg-1_all.deb ... 221s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 221s Selecting previously unselected package r-cran-png. 221s Preparing to unpack .../178-r-cran-png_0.1-8-1_arm64.deb ... 221s Unpacking r-cran-png (0.1-8-1) ... 221s Selecting previously unselected package r-bioc-zlibbioc. 221s Preparing to unpack .../179-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 221s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 221s Selecting previously unselected package r-bioc-xvector. 221s Preparing to unpack .../180-r-bioc-xvector_0.42.0-1_arm64.deb ... 221s Unpacking r-bioc-xvector (0.42.0-1) ... 221s Selecting previously unselected package r-cran-bitops. 222s Preparing to unpack .../181-r-cran-bitops_1.0-7-1_arm64.deb ... 222s Unpacking r-cran-bitops (1.0-7-1) ... 222s Selecting previously unselected package r-cran-rcurl. 222s Preparing to unpack .../182-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 222s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 222s Selecting previously unselected package r-bioc-genomeinfodbdata. 222s Preparing to unpack .../183-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 222s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 222s Selecting previously unselected package r-bioc-genomeinfodb. 222s Preparing to unpack .../184-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 222s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 222s Selecting previously unselected package r-cran-crayon. 222s Preparing to unpack .../185-r-cran-crayon_1.5.2-1_all.deb ... 222s Unpacking r-cran-crayon (1.5.2-1) ... 222s Selecting previously unselected package r-bioc-biostrings. 222s Preparing to unpack .../186-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 222s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 222s Selecting previously unselected package r-bioc-keggrest. 223s Preparing to unpack .../187-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 223s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 223s Selecting previously unselected package r-bioc-annotationdbi. 223s Preparing to unpack .../188-r-bioc-annotationdbi_1.64.1-1_all.deb ... 223s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 223s Selecting previously unselected package r-cran-generics. 223s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 223s Unpacking r-cran-generics (0.1.3-1) ... 223s Selecting previously unselected package r-cran-magrittr. 223s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_arm64.deb ... 223s Unpacking r-cran-magrittr (2.0.3-1) ... 223s Selecting previously unselected package r-cran-fansi. 223s Preparing to unpack .../191-r-cran-fansi_1.0.5-1_arm64.deb ... 223s Unpacking r-cran-fansi (1.0.5-1) ... 223s Selecting previously unselected package r-cran-utf8. 223s Preparing to unpack .../192-r-cran-utf8_1.2.4-1_arm64.deb ... 223s Unpacking r-cran-utf8 (1.2.4-1) ... 223s Selecting previously unselected package r-cran-pillar. 223s Preparing to unpack .../193-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 223s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 223s Selecting previously unselected package r-cran-tibble. 223s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 223s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 223s Selecting previously unselected package r-cran-withr. 223s Preparing to unpack .../195-r-cran-withr_2.5.0-1_all.deb ... 223s Unpacking r-cran-withr (2.5.0-1) ... 223s Selecting previously unselected package r-cran-tidyselect. 223s Preparing to unpack .../196-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 223s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 223s Selecting previously unselected package r-cran-dplyr. 223s Preparing to unpack .../197-r-cran-dplyr_1.1.4-1_arm64.deb ... 223s Unpacking r-cran-dplyr (1.1.4-1) ... 223s Selecting previously unselected package r-cran-purrr. 223s Preparing to unpack .../198-r-cran-purrr_1.0.2-1_arm64.deb ... 223s Unpacking r-cran-purrr (1.0.2-1) ... 223s Selecting previously unselected package r-cran-stringi. 224s Preparing to unpack .../199-r-cran-stringi_1.8.3-1_arm64.deb ... 224s Unpacking r-cran-stringi (1.8.3-1) ... 224s Selecting previously unselected package r-cran-stringr. 224s Preparing to unpack .../200-r-cran-stringr_1.5.1-1_all.deb ... 224s Unpacking r-cran-stringr (1.5.1-1) ... 224s Selecting previously unselected package r-cran-tidyr. 224s Preparing to unpack .../201-r-cran-tidyr_1.3.1-1_arm64.deb ... 224s Unpacking r-cran-tidyr (1.3.1-1) ... 224s Selecting previously unselected package r-cran-dbplyr. 224s Preparing to unpack .../202-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 224s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 224s Selecting previously unselected package r-cran-filelock. 224s Preparing to unpack .../203-r-cran-filelock_1.0.3-1_arm64.deb ... 224s Unpacking r-cran-filelock (1.0.3-1) ... 224s Selecting previously unselected package r-bioc-biocfilecache. 224s Preparing to unpack .../204-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 224s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 224s Selecting previously unselected package r-cran-formatr. 225s Preparing to unpack .../205-r-cran-formatr_1.14-1_all.deb ... 225s Unpacking r-cran-formatr (1.14-1) ... 225s Selecting previously unselected package r-cran-lambda.r. 225s Preparing to unpack .../206-r-cran-lambda.r_1.2.4-2build1_all.deb ... 225s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 225s Selecting previously unselected package r-cran-futile.options. 225s Preparing to unpack .../207-r-cran-futile.options_1.0.1-3build1_all.deb ... 225s Unpacking r-cran-futile.options (1.0.1-3build1) ... 225s Selecting previously unselected package r-cran-futile.logger. 225s Preparing to unpack .../208-r-cran-futile.logger_1.4.3-4build1_all.deb ... 225s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 225s Selecting previously unselected package r-cran-snow. 225s Preparing to unpack .../209-r-cran-snow_1%3a0.4.4-2_all.deb ... 225s Unpacking r-cran-snow (1:0.4.4-2) ... 225s Selecting previously unselected package r-cran-codetools. 225s Preparing to unpack .../210-r-cran-codetools_0.2-19-1_all.deb ... 225s Unpacking r-cran-codetools (0.2-19-1) ... 225s Selecting previously unselected package r-cran-bh. 225s Preparing to unpack .../211-r-cran-bh_1.84.0-1_all.deb ... 225s Unpacking r-cran-bh (1.84.0-1) ... 225s Selecting previously unselected package r-bioc-biocparallel. 225s Preparing to unpack .../212-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 225s Unpacking r-bioc-biocparallel (1.36.0-1) ... 225s Selecting previously unselected package r-cran-base64enc. 226s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3_arm64.deb ... 226s Unpacking r-cran-base64enc (0.1-3-3) ... 226s Selecting previously unselected package r-cran-digest. 226s Preparing to unpack .../214-r-cran-digest_0.6.34-1_arm64.deb ... 226s Unpacking r-cran-digest (0.6.34-1) ... 226s Selecting previously unselected package r-cran-ellipsis. 226s Preparing to unpack .../215-r-cran-ellipsis_0.3.2-2_arm64.deb ... 226s Unpacking r-cran-ellipsis (0.3.2-2) ... 226s Selecting previously unselected package r-cran-htmltools. 226s Preparing to unpack .../216-r-cran-htmltools_0.5.7-1_arm64.deb ... 226s Unpacking r-cran-htmltools (0.5.7-1) ... 226s Selecting previously unselected package r-cran-evaluate. 226s Preparing to unpack .../217-r-cran-evaluate_0.23-1_all.deb ... 226s Unpacking r-cran-evaluate (0.23-1) ... 226s Selecting previously unselected package r-cran-xfun. 226s Preparing to unpack .../218-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 226s Unpacking r-cran-xfun (0.41+dfsg-1) ... 226s Selecting previously unselected package r-cran-highr. 226s Preparing to unpack .../219-r-cran-highr_0.10+dfsg-1_all.deb ... 226s Unpacking r-cran-highr (0.10+dfsg-1) ... 226s Selecting previously unselected package r-cran-yaml. 226s Preparing to unpack .../220-r-cran-yaml_2.3.8-1_arm64.deb ... 226s Unpacking r-cran-yaml (2.3.8-1) ... 226s Selecting previously unselected package libjs-mathjax. 226s Preparing to unpack .../221-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 226s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 227s Selecting previously unselected package r-cran-knitr. 227s Preparing to unpack .../222-r-cran-knitr_1.45+dfsg-1_all.deb ... 227s Unpacking r-cran-knitr (1.45+dfsg-1) ... 227s Selecting previously unselected package r-cran-jquerylib. 227s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 227s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 227s Selecting previously unselected package r-cran-fs. 228s Preparing to unpack .../224-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 228s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 228s Selecting previously unselected package r-cran-rappdirs. 228s Preparing to unpack .../225-r-cran-rappdirs_0.3.3-1_arm64.deb ... 228s Unpacking r-cran-rappdirs (0.3.3-1) ... 228s Selecting previously unselected package r-cran-sass. 229s Preparing to unpack .../226-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 229s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 229s Selecting previously unselected package r-cran-bslib. 229s Preparing to unpack .../227-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 229s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 230s Selecting previously unselected package r-cran-fontawesome. 230s Preparing to unpack .../228-r-cran-fontawesome_0.5.2-1_all.deb ... 230s Unpacking r-cran-fontawesome (0.5.2-1) ... 230s Selecting previously unselected package r-cran-tinytex. 231s Preparing to unpack .../229-r-cran-tinytex_0.49-1_all.deb ... 231s Unpacking r-cran-tinytex (0.49-1) ... 231s Selecting previously unselected package libjs-modernizr. 231s Preparing to unpack .../230-libjs-modernizr_2.6.2+ds1-5_all.deb ... 231s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 231s Selecting previously unselected package r-cran-pkgkitten. 231s Preparing to unpack .../231-r-cran-pkgkitten_0.2.3-1_all.deb ... 231s Unpacking r-cran-pkgkitten (0.2.3-1) ... 231s Selecting previously unselected package r-cran-rcpp. 231s Preparing to unpack .../232-r-cran-rcpp_1.0.12-1_arm64.deb ... 231s Unpacking r-cran-rcpp (1.0.12-1) ... 231s Selecting previously unselected package r-cran-later. 231s Preparing to unpack .../233-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 231s Unpacking r-cran-later (1.3.2+dfsg-1) ... 231s Selecting previously unselected package r-cran-promises. 231s Preparing to unpack .../234-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 231s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 231s Selecting previously unselected package r-cran-httpuv. 232s Preparing to unpack .../235-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 232s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 232s Selecting previously unselected package r-cran-xtable. 232s Preparing to unpack .../236-r-cran-xtable_1%3a1.8-4-2_all.deb ... 232s Unpacking r-cran-xtable (1:1.8-4-2) ... 232s Selecting previously unselected package r-cran-sourcetools. 232s Preparing to unpack .../237-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 232s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 232s Selecting previously unselected package r-cran-commonmark. 232s Preparing to unpack .../238-r-cran-commonmark_1.9.1-1_arm64.deb ... 232s Unpacking r-cran-commonmark (1.9.1-1) ... 232s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 232s Preparing to unpack .../239-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 232s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 232s Selecting previously unselected package r-cran-shiny. 232s Preparing to unpack .../240-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 232s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 232s Selecting previously unselected package r-cran-rmarkdown. 233s Preparing to unpack .../241-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 233s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 233s Selecting previously unselected package r-cran-bookdown. 233s Preparing to unpack .../242-r-cran-bookdown_0.37+dfsg-1_all.deb ... 233s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 233s Selecting previously unselected package r-cran-biocmanager. 233s Preparing to unpack .../243-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 233s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 233s Selecting previously unselected package tex-common. 233s Preparing to unpack .../244-tex-common_6.18_all.deb ... 233s Unpacking tex-common (6.18) ... 233s Selecting previously unselected package t1utils. 233s Preparing to unpack .../245-t1utils_1.41-4build2_arm64.deb ... 233s Unpacking t1utils (1.41-4build2) ... 233s Selecting previously unselected package texlive-binaries. 233s Preparing to unpack .../246-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 233s Unpacking texlive-binaries (2023.20230311.66589-9) ... 234s Selecting previously unselected package texlive-base. 234s Preparing to unpack .../247-texlive-base_2023.20240207-1_all.deb ... 234s Unpacking texlive-base (2023.20240207-1) ... 236s Selecting previously unselected package texlive-latex-base. 236s Preparing to unpack .../248-texlive-latex-base_2023.20240207-1_all.deb ... 236s Unpacking texlive-latex-base (2023.20240207-1) ... 237s Selecting previously unselected package texlive-bibtex-extra. 237s Preparing to unpack .../249-texlive-bibtex-extra_2023.20240207-1_all.deb ... 237s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 239s Selecting previously unselected package r-bioc-biocstyle. 239s Preparing to unpack .../250-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 239s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 240s Selecting previously unselected package r-cran-xml. 240s Preparing to unpack .../251-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 240s Unpacking r-cran-xml (3.99-0.16.1-1) ... 240s Selecting previously unselected package r-cran-hms. 240s Preparing to unpack .../252-r-cran-hms_1.1.3-1_all.deb ... 240s Unpacking r-cran-hms (1.1.3-1) ... 240s Selecting previously unselected package r-cran-prettyunits. 240s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 240s Unpacking r-cran-prettyunits (1.2.0-1) ... 240s Selecting previously unselected package r-cran-progress. 240s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 240s Unpacking r-cran-progress (1.2.3-1) ... 240s Selecting previously unselected package r-cran-xml2. 240s Preparing to unpack .../255-r-cran-xml2_1.3.6-1_arm64.deb ... 240s Unpacking r-cran-xml2 (1.3.6-1) ... 240s Selecting previously unselected package r-bioc-biomart. 240s Preparing to unpack .../256-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 240s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 241s Selecting previously unselected package r-cran-backports. 241s Preparing to unpack .../257-r-cran-backports_1.4.1-1_arm64.deb ... 241s Unpacking r-cran-backports (1.4.1-1) ... 241s Selecting previously unselected package r-cran-broom. 241s Preparing to unpack .../258-r-cran-broom_1.0.5+dfsg-1_all.deb ... 241s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 241s Selecting previously unselected package r-cran-lattice. 241s Preparing to unpack .../259-r-cran-lattice_0.22-5-1_arm64.deb ... 241s Unpacking r-cran-lattice (0.22-5-1) ... 241s Selecting previously unselected package r-cran-matrix. 241s Preparing to unpack .../260-r-cran-matrix_1.6-5-1_arm64.deb ... 241s Unpacking r-cran-matrix (1.6-5-1) ... 241s Selecting previously unselected package r-bioc-decoupler. 241s Preparing to unpack .../261-r-bioc-decoupler_2.8.0+dfsg-2_all.deb ... 241s Unpacking r-bioc-decoupler (2.8.0+dfsg-2) ... 241s Selecting previously unselected package r-cran-matrixstats. 241s Preparing to unpack .../262-r-cran-matrixstats_1.2.0-1_arm64.deb ... 241s Unpacking r-cran-matrixstats (1.2.0-1) ... 241s Selecting previously unselected package r-bioc-matrixgenerics. 241s Preparing to unpack .../263-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 241s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 241s Selecting previously unselected package r-cran-abind. 241s Preparing to unpack .../264-r-cran-abind_1.4-5-2_all.deb ... 241s Unpacking r-cran-abind (1.4-5-2) ... 241s Selecting previously unselected package r-bioc-s4arrays. 241s Preparing to unpack .../265-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 241s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 241s Selecting previously unselected package r-bioc-sparsearray. 241s Preparing to unpack .../266-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 241s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 241s Selecting previously unselected package r-bioc-delayedarray. 241s Preparing to unpack .../267-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 241s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 241s Selecting previously unselected package r-bioc-genomicranges. 241s Preparing to unpack .../268-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 241s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 241s Selecting previously unselected package r-bioc-summarizedexperiment. 242s Preparing to unpack .../269-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 242s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 242s Selecting previously unselected package r-cran-locfit. 242s Preparing to unpack .../270-r-cran-locfit_1.5-9.8-1_arm64.deb ... 242s Unpacking r-cran-locfit (1.5-9.8-1) ... 242s Selecting previously unselected package r-cran-gtable. 242s Preparing to unpack .../271-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 242s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 242s Selecting previously unselected package r-cran-isoband. 242s Preparing to unpack .../272-r-cran-isoband_0.2.7-1_arm64.deb ... 242s Unpacking r-cran-isoband (0.2.7-1) ... 242s Selecting previously unselected package r-cran-mass. 242s Preparing to unpack .../273-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 242s Unpacking r-cran-mass (7.3-60.0.1-1) ... 242s Selecting previously unselected package r-cran-nlme. 242s Preparing to unpack .../274-r-cran-nlme_3.1.164-1_arm64.deb ... 242s Unpacking r-cran-nlme (3.1.164-1) ... 242s Selecting previously unselected package r-cran-mgcv. 242s Preparing to unpack .../275-r-cran-mgcv_1.9-1-1_arm64.deb ... 242s Unpacking r-cran-mgcv (1.9-1-1) ... 242s Selecting previously unselected package r-cran-farver. 242s Preparing to unpack .../276-r-cran-farver_2.1.1-1_arm64.deb ... 242s Unpacking r-cran-farver (2.1.1-1) ... 242s Selecting previously unselected package r-cran-labeling. 242s Preparing to unpack .../277-r-cran-labeling_0.4.3-1_all.deb ... 242s Unpacking r-cran-labeling (0.4.3-1) ... 242s Selecting previously unselected package r-cran-colorspace. 242s Preparing to unpack .../278-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 242s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 242s Selecting previously unselected package r-cran-munsell. 242s Preparing to unpack .../279-r-cran-munsell_0.5.0-2build1_all.deb ... 242s Unpacking r-cran-munsell (0.5.0-2build1) ... 242s Selecting previously unselected package r-cran-rcolorbrewer. 242s Preparing to unpack .../280-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 242s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 242s Selecting previously unselected package r-cran-viridislite. 242s Preparing to unpack .../281-r-cran-viridislite_0.4.2-2_all.deb ... 242s Unpacking r-cran-viridislite (0.4.2-2) ... 242s Selecting previously unselected package r-cran-scales. 242s Preparing to unpack .../282-r-cran-scales_1.3.0-1_all.deb ... 242s Unpacking r-cran-scales (1.3.0-1) ... 242s Selecting previously unselected package r-cran-ggplot2. 242s Preparing to unpack .../283-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 242s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 242s Selecting previously unselected package r-cran-rcpparmadillo. 243s Preparing to unpack .../284-r-cran-rcpparmadillo_0.12.8.0.0-1_arm64.deb ... 243s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 243s Selecting previously unselected package r-bioc-deseq2. 243s Preparing to unpack .../285-r-bioc-deseq2_1.42.0+dfsg-1_arm64.deb ... 243s Unpacking r-bioc-deseq2 (1.42.0+dfsg-1) ... 243s Selecting previously unselected package r-cran-ggrepel. 243s Preparing to unpack .../286-r-cran-ggrepel_0.9.5-1_arm64.deb ... 243s Unpacking r-cran-ggrepel (0.9.5-1) ... 243s Selecting previously unselected package r-cran-gridextra. 243s Preparing to unpack .../287-r-cran-gridextra_2.3-3build1_all.deb ... 243s Unpacking r-cran-gridextra (2.3-3build1) ... 243s Selecting previously unselected package r-cran-plyr. 243s Preparing to unpack .../288-r-cran-plyr_1.8.9-1_arm64.deb ... 243s Unpacking r-cran-plyr (1.8.9-1) ... 243s Selecting previously unselected package r-cran-reshape2. 243s Preparing to unpack .../289-r-cran-reshape2_1.4.4-2build1_arm64.deb ... 243s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 244s Selecting previously unselected package r-bioc-progeny. 244s Preparing to unpack .../290-r-bioc-progeny_1.24.0+ds-1_all.deb ... 244s Unpacking r-bioc-progeny (1.24.0+ds-1) ... 244s Selecting previously unselected package r-bioc-singlecellexperiment. 244s Preparing to unpack .../291-r-bioc-singlecellexperiment_1.24.0+ds-1_all.deb ... 244s Unpacking r-bioc-singlecellexperiment (1.24.0+ds-1) ... 244s Selecting previously unselected package r-cran-brio. 244s Preparing to unpack .../292-r-cran-brio_1.1.4-1_arm64.deb ... 244s Unpacking r-cran-brio (1.1.4-1) ... 244s Selecting previously unselected package r-cran-ps. 244s Preparing to unpack .../293-r-cran-ps_1.7.6-1_arm64.deb ... 244s Unpacking r-cran-ps (1.7.6-1) ... 244s Selecting previously unselected package r-cran-processx. 244s Preparing to unpack .../294-r-cran-processx_3.8.3-1_arm64.deb ... 244s Unpacking r-cran-processx (3.8.3-1) ... 244s Selecting previously unselected package r-cran-callr. 244s Preparing to unpack .../295-r-cran-callr_3.7.3-2_all.deb ... 244s Unpacking r-cran-callr (3.7.3-2) ... 245s Selecting previously unselected package r-cran-catools. 245s Preparing to unpack .../296-r-cran-catools_1.18.2-1_arm64.deb ... 245s Unpacking r-cran-catools (1.18.2-1) ... 245s Selecting previously unselected package r-cran-rematch. 245s Preparing to unpack .../297-r-cran-rematch_2.0.0-1_all.deb ... 245s Unpacking r-cran-rematch (2.0.0-1) ... 245s Selecting previously unselected package r-cran-cellranger. 245s Preparing to unpack .../298-r-cran-cellranger_1.1.0-3_all.deb ... 245s Unpacking r-cran-cellranger (1.1.0-3) ... 245s Selecting previously unselected package r-cran-clipr. 245s Preparing to unpack .../299-r-cran-clipr_0.8.0-1_all.deb ... 245s Unpacking r-cran-clipr (0.8.0-1) ... 245s Selecting previously unselected package r-cran-cluster. 245s Preparing to unpack .../300-r-cran-cluster_2.1.6-1_arm64.deb ... 245s Unpacking r-cran-cluster (2.1.6-1) ... 245s Selecting previously unselected package r-cran-htmlwidgets. 245s Preparing to unpack .../301-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 245s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 245s Selecting previously unselected package r-cran-miniui. 245s Preparing to unpack .../302-r-cran-miniui_0.1.1.1-3build1_all.deb ... 245s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 245s Selecting previously unselected package r-cran-shinyjs. 245s Preparing to unpack .../303-r-cran-shinyjs_2.1.0-1_all.deb ... 245s Unpacking r-cran-shinyjs (2.1.0-1) ... 245s Selecting previously unselected package r-cran-colourpicker. 245s Preparing to unpack .../304-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 245s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 245s Selecting previously unselected package r-cran-cowplot. 245s Preparing to unpack .../305-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 245s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 245s Selecting previously unselected package r-cran-lazyeval. 246s Preparing to unpack .../306-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 246s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 246s Selecting previously unselected package r-cran-crosstalk. 246s Preparing to unpack .../307-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 246s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 246s Selecting previously unselected package r-cran-data.table. 246s Preparing to unpack .../308-r-cran-data.table_1.14.10+dfsg-1_arm64.deb ... 246s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 246s Selecting previously unselected package r-cran-deldir. 246s Preparing to unpack .../309-r-cran-deldir_2.0-4-1_arm64.deb ... 246s Unpacking r-cran-deldir (2.0-4-1) ... 246s Selecting previously unselected package r-cran-desc. 246s Preparing to unpack .../310-r-cran-desc_1.4.3-1_all.deb ... 246s Unpacking r-cran-desc (1.4.3-1) ... 247s Selecting previously unselected package r-cran-diffobj. 247s Preparing to unpack .../311-r-cran-diffobj_0.3.5-1_arm64.deb ... 247s Unpacking r-cran-diffobj (0.3.5-1) ... 247s Selecting previously unselected package r-cran-dotcall64. 247s Preparing to unpack .../312-r-cran-dotcall64_1.1-1-1_arm64.deb ... 247s Unpacking r-cran-dotcall64 (1.1-1-1) ... 247s Selecting previously unselected package r-cran-sitmo. 247s Preparing to unpack .../313-r-cran-sitmo_2.0.2-1_arm64.deb ... 247s Unpacking r-cran-sitmo (2.0.2-1) ... 247s Selecting previously unselected package r-cran-dqrng. 247s Preparing to unpack .../314-r-cran-dqrng_0.3.2+dfsg-1_arm64.deb ... 247s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 247s Selecting previously unselected package r-cran-fastdummies. 247s Preparing to unpack .../315-r-cran-fastdummies_1.7.3-2_all.deb ... 247s Unpacking r-cran-fastdummies (1.7.3-2) ... 247s Selecting previously unselected package r-cran-survival. 247s Preparing to unpack .../316-r-cran-survival_3.5-8-1_arm64.deb ... 247s Unpacking r-cran-survival (3.5-8-1) ... 247s Selecting previously unselected package r-cran-fitdistrplus. 247s Preparing to unpack .../317-r-cran-fitdistrplus_1.1-11-1_all.deb ... 247s Unpacking r-cran-fitdistrplus (1.1-11-1) ... 247s Selecting previously unselected package r-cran-fnn. 247s Preparing to unpack .../318-r-cran-fnn_1.1.4-1_arm64.deb ... 247s Unpacking r-cran-fnn (1.1.4-1) ... 247s Selecting previously unselected package r-cran-globals. 247s Preparing to unpack .../319-r-cran-globals_0.16.2-1_all.deb ... 247s Unpacking r-cran-globals (0.16.2-1) ... 247s Selecting previously unselected package r-cran-listenv. 247s Preparing to unpack .../320-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 247s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 247s Selecting previously unselected package r-cran-parallelly. 247s Preparing to unpack .../321-r-cran-parallelly_1.37.1-1_arm64.deb ... 247s Unpacking r-cran-parallelly (1.37.1-1) ... 247s Selecting previously unselected package r-cran-future. 247s Preparing to unpack .../322-r-cran-future_1.33.1+dfsg-1_all.deb ... 247s Unpacking r-cran-future (1.33.1+dfsg-1) ... 247s Selecting previously unselected package r-cran-future.apply. 247s Preparing to unpack .../323-r-cran-future.apply_1.11.1+dfsg-1_all.deb ... 247s Unpacking r-cran-future.apply (1.11.1+dfsg-1) ... 247s Selecting previously unselected package r-cran-gtools. 248s Preparing to unpack .../324-r-cran-gtools_3.9.5-1_arm64.deb ... 248s Unpacking r-cran-gtools (3.9.5-1) ... 248s Selecting previously unselected package r-cran-gdata. 248s Preparing to unpack .../325-r-cran-gdata_3.0.0-1_all.deb ... 248s Unpacking r-cran-gdata (3.0.0-1) ... 248s Selecting previously unselected package r-cran-ggridges. 248s Preparing to unpack .../326-r-cran-ggridges_0.5.6-1_all.deb ... 248s Unpacking r-cran-ggridges (0.5.6-1) ... 248s Selecting previously unselected package r-cran-goftest. 248s Preparing to unpack .../327-r-cran-goftest_1.2-3-1_arm64.deb ... 248s Unpacking r-cran-goftest (1.2-3-1) ... 248s Selecting previously unselected package r-cran-kernsmooth. 248s Preparing to unpack .../328-r-cran-kernsmooth_2.23-22-1_arm64.deb ... 248s Unpacking r-cran-kernsmooth (2.23-22-1) ... 248s Selecting previously unselected package r-cran-gplots. 248s Preparing to unpack .../329-r-cran-gplots_3.1.3.1-1_all.deb ... 248s Unpacking r-cran-gplots (3.1.3.1-1) ... 248s Selecting previously unselected package r-cran-rprojroot. 248s Preparing to unpack .../330-r-cran-rprojroot_2.0.4-1_all.deb ... 248s Unpacking r-cran-rprojroot (2.0.4-1) ... 248s Selecting previously unselected package r-cran-here. 248s Preparing to unpack .../331-r-cran-here_1.0.1-2_all.deb ... 248s Unpacking r-cran-here (1.0.1-2) ... 248s Selecting previously unselected package r-cran-ica. 248s Preparing to unpack .../332-r-cran-ica_1.0-3-1_all.deb ... 248s Unpacking r-cran-ica (1.0-3-1) ... 248s Selecting previously unselected package r-cran-igraph. 248s Preparing to unpack .../333-r-cran-igraph_1.6.0-1_arm64.deb ... 248s Unpacking r-cran-igraph (1.6.0-1) ... 248s Selecting previously unselected package r-cran-irlba. 248s Preparing to unpack .../334-r-cran-irlba_2.3.5.1-2_arm64.deb ... 248s Unpacking r-cran-irlba (2.3.5.1-2) ... 248s Selecting previously unselected package r-cran-rcpptoml. 248s Preparing to unpack .../335-r-cran-rcpptoml_0.2.2+dfsg-1_arm64.deb ... 248s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 248s Selecting previously unselected package r-cran-reticulate. 248s Preparing to unpack .../336-r-cran-reticulate_1.35.0+dfsg-1_arm64.deb ... 248s Unpacking r-cran-reticulate (1.35.0+dfsg-1) ... 248s Selecting previously unselected package r-cran-leiden. 248s Preparing to unpack .../337-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 248s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 248s Selecting previously unselected package r-cran-zoo. 248s Preparing to unpack .../338-r-cran-zoo_1.8-12-2_arm64.deb ... 248s Unpacking r-cran-zoo (1.8-12-2) ... 248s Selecting previously unselected package r-cran-lmtest. 248s Preparing to unpack .../339-r-cran-lmtest_0.9.40-1_arm64.deb ... 248s Unpacking r-cran-lmtest (0.9.40-1) ... 248s Selecting previously unselected package r-cran-patchwork. 248s Preparing to unpack .../340-r-cran-patchwork_1.2.0-1_all.deb ... 248s Unpacking r-cran-patchwork (1.2.0-1) ... 248s Selecting previously unselected package r-cran-pbapply. 248s Preparing to unpack .../341-r-cran-pbapply_1.7-2-1_all.deb ... 248s Unpacking r-cran-pbapply (1.7-2-1) ... 249s Selecting previously unselected package r-cran-pheatmap. 249s Preparing to unpack .../342-r-cran-pheatmap_1.0.12-2build1_all.deb ... 249s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 249s Selecting previously unselected package r-cran-pkgbuild. 249s Preparing to unpack .../343-r-cran-pkgbuild_1.4.3-1_all.deb ... 249s Unpacking r-cran-pkgbuild (1.4.3-1) ... 249s Selecting previously unselected package r-cran-pkgload. 249s Preparing to unpack .../344-r-cran-pkgload_1.3.4-1_all.deb ... 249s Unpacking r-cran-pkgload (1.3.4-1) ... 249s Selecting previously unselected package r-cran-plotly. 249s Preparing to unpack .../345-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 249s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 249s Selecting previously unselected package r-cran-polyclip. 249s Preparing to unpack .../346-r-cran-polyclip_1.10-6-1_arm64.deb ... 249s Unpacking r-cran-polyclip (1.10-6-1) ... 249s 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This may take some time... done. 258s Running mktexlsr /var/lib/texmf ... done. 258s Building format(s) --all. 296s This may take some time... done. 314s (Reading database ... 133495 files and directories currently installed.) 314s Removing autopkgtest-satdep (0) ... 315s autopkgtest [17:44:52]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 315s autopkgtest [17:44:52]: test pkg-r-autopkgtest: [----------------------- 315s Test: Try to load the R library progeny 315s 315s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 315s Copyright (C) 2024 The R Foundation for Statistical Computing 315s Platform: aarch64-unknown-linux-gnu (64-bit) 315s 315s R is free software and comes with ABSOLUTELY NO WARRANTY. 315s You are welcome to redistribute it under certain conditions. 315s Type 'license()' or 'licence()' for distribution details. 315s 315s R is a collaborative project with many contributors. 315s Type 'contributors()' for more information and 315s 'citation()' on how to cite R or R packages in publications. 315s 315s Type 'demo()' for some demos, 'help()' for on-line help, or 315s 'help.start()' for an HTML browser interface to help. 315s Type 'q()' to quit R. 315s 315s > library('progeny') 316s > 316s > 316s Other tests are currently unsupported! 316s They will be progressively added. 317s autopkgtest [17:44:54]: test pkg-r-autopkgtest: -----------------------] 317s autopkgtest [17:44:54]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 317s pkg-r-autopkgtest PASS 318s autopkgtest [17:44:55]: @@@@@@@@@@@@@@@@@@@@ summary 318s pkg-r-autopkgtest PASS 329s Creating nova instance adt-noble-arm64-r-bioc-progeny-20240316-173937-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...