0s autopkgtest [17:34:29]: starting date and time: 2024-03-16 17:34:29+0000
  0s autopkgtest [17:34:29]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data
  0s autopkgtest [17:34:29]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ldy_gooe/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-hypergraph --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-2.secgroup --name adt-noble-arm64-r-bioc-hypergraph-20240316-173429-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
102s autopkgtest [17:36:11]: testbed dpkg architecture: arm64
103s autopkgtest [17:36:12]: testbed apt version: 2.7.12
103s autopkgtest [17:36:12]: @@@@@@@@@@@@@@@@@@@@ test bed setup
103s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
104s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
105s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB]
105s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB]
105s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
105s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB]
105s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
105s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
105s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
105s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB]
105s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
105s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB]
105s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
109s Fetched 9060 kB in 3s (2915 kB/s)
109s Reading package lists...
113s Reading package lists...
114s Building dependency tree...
114s Reading state information...
115s Calculating upgrade...
115s The following packages will be REMOVED:
115s   libglib2.0-0 libssl3
115s The following NEW packages will be installed:
115s   libglib2.0-0t64 libssl3t64 xdg-user-dirs
115s The following packages have been kept back:
115s   curl
115s The following packages will be upgraded:
115s   gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common
115s   ubuntu-minimal ubuntu-standard
116s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded.
116s Need to get 4613 kB of archives.
116s After this operation, 211 kB of additional disk space will be used.
116s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB]
116s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB]
116s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB]
116s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB]
117s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB]
117s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B]
117s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
117s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB]
117s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB]
117s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB]
117s Fetched 4613 kB in 1s (4406 kB/s)
118s (Reading database ... 
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(Reading database ... 74758 files and directories currently installed.)
118s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ...
119s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
119s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested:
119s  udisks2 depends on libglib2.0-0 (>= 2.77.0).
119s  shared-mime-info depends on libglib2.0-0 (>= 2.75.3).
119s  python3-gi depends on libglib2.0-0 (>= 2.77.0).
119s  python3-dbus depends on libglib2.0-0 (>= 2.16.0).
119s  netplan.io depends on libglib2.0-0 (>= 2.70.0).
119s  netplan-generator depends on libglib2.0-0 (>= 2.70.0).
119s  libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0).
119s  libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0).
119s  libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
119s  libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56).
119s  libqmi-proxy depends on libglib2.0-0 (>= 2.30.0).
119s  libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0).
119s  libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
119s  libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
119s  libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3).
119s  libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0).
119s  libmbim-proxy depends on libglib2.0-0 (>= 2.56).
119s  libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56).
119s  libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3).
119s  libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3).
119s  libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3).
119s  libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0).
119s  libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0).
119s  libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0).
119s  libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3).
119s  libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2).
119s  fwupd depends on libglib2.0-0 (>= 2.79.0).
119s  bolt depends on libglib2.0-0 (>= 2.56.0).
119s 
119s (Reading database ... 
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119s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ...
119s Selecting previously unselected package libglib2.0-0t64:arm64.
119s (Reading database ... 
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(Reading database ... 74733 files and directories currently installed.)
119s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ...
119s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled...
119s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm'
119s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
119s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ...
119s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ...
120s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested:
120s  wget depends on libssl3 (>= 3.0.0).
120s  u-boot-tools depends on libssl3 (>= 3.0.0).
120s  tnftp depends on libssl3 (>= 3.0.0).
120s  tcpdump depends on libssl3 (>= 3.0.0).
120s  systemd-resolved depends on libssl3 (>= 3.0.0).
120s  systemd depends on libssl3 (>= 3.0.0).
120s  sudo depends on libssl3 (>= 3.0.0).
120s  sbsigntool depends on libssl3 (>= 3.0.0).
120s  rsync depends on libssl3 (>= 3.0.0).
120s  python3-cryptography depends on libssl3 (>= 3.0.0).
120s  openssh-server depends on libssl3 (>= 3.0.10).
120s  openssh-client depends on libssl3 (>= 3.0.10).
120s  mtd-utils depends on libssl3 (>= 3.0.0).
120s  mokutil depends on libssl3 (>= 3.0.0).
120s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
120s  libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0).
120s  libssh-4:arm64 depends on libssl3 (>= 3.0.0).
120s  libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0).
120s  libsasl2-2:arm64 depends on libssl3 (>= 3.0.0).
120s  libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0).
120s  libnvme1 depends on libssl3 (>= 3.0.0).
120s  libkrb5-3:arm64 depends on libssl3 (>= 3.0.0).
120s  libkmod2:arm64 depends on libssl3 (>= 3.0.0).
120s  libfido2-1:arm64 depends on libssl3 (>= 3.0.0).
120s  libcurl4:arm64 depends on libssl3 (>= 3.0.0).
120s  libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0).
120s  kmod depends on libssl3 (>= 3.0.0).
120s  dhcpcd-base depends on libssl3 (>= 3.0.0).
120s  bind9-libs:arm64 depends on libssl3 (>= 3.0.0).
120s 
120s (Reading database ... 
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120s Removing libssl3:arm64 (3.0.10-1ubuntu4) ...
120s Selecting previously unselected package libssl3t64:arm64.
120s (Reading database ... 
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(Reading database ... 74747 files and directories currently installed.)
120s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ...
120s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ...
120s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ...
120s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
120s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ...
120s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ...
120s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ...
120s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
120s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ...
120s Unpacking ubuntu-minimal (1.536) over (1.535) ...
120s Selecting previously unselected package xdg-user-dirs.
120s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ...
120s Unpacking xdg-user-dirs (0.18-1) ...
120s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ...
120s Unpacking ubuntu-standard (1.536) over (1.535) ...
120s Setting up ubuntu-minimal (1.536) ...
120s Setting up xdg-user-dirs (0.18-1) ...
120s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ...
120s Setting up libtirpc-common (1.3.4+ds-1.1) ...
120s Setting up ubuntu-standard (1.536) ...
120s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ...
120s No schema files found: doing nothing.
120s Setting up libglib2.0-data (2.79.3-3ubuntu5) ...
120s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ...
120s Setting up openssl (3.0.13-0ubuntu1) ...
120s Setting up readline-common (8.2-3.1) ...
120s Processing triggers for man-db (2.12.0-3) ...
121s Processing triggers for install-info (7.1-3) ...
121s Processing triggers for libc-bin (2.39-0ubuntu2) ...
122s Reading package lists...
122s Building dependency tree...
122s Reading state information...
123s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
124s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
124s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
124s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
124s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
127s Reading package lists...
127s Reading package lists...
127s Building dependency tree...
127s Reading state information...
128s Calculating upgrade...
128s The following packages have been kept back:
128s   curl
128s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
128s Reading package lists...
128s Building dependency tree...
128s Reading state information...
129s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
136s autopkgtest [17:36:45]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
136s autopkgtest [17:36:45]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-hypergraph
138s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-hypergraph 1.74.0-1 (dsc) [2104 B]
138s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-hypergraph 1.74.0-1 (tar) [8444 B]
138s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-hypergraph 1.74.0-1 (diff) [4296 B]
138s gpgv: Signature made Thu Nov 30 07:44:01 2023 UTC
138s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
138s gpgv:                issuer "tille@debian.org"
138s gpgv: Can't check signature: No public key
138s dpkg-source: warning: cannot verify inline signature for ./r-bioc-hypergraph_1.74.0-1.dsc: no acceptable signature found
138s autopkgtest [17:36:47]: testing package r-bioc-hypergraph version 1.74.0-1
139s autopkgtest [17:36:48]: build not needed
139s autopkgtest [17:36:48]: test pkg-r-autopkgtest: preparing testbed
141s Reading package lists...
141s Building dependency tree...
141s Reading state information...
142s Starting pkgProblemResolver with broken count: 0
142s Starting 2 pkgProblemResolver with broken count: 0
142s Done
143s The following additional packages will be installed:
143s   build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu
143s   curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core
143s   fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu
143s   gcc gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran
143s   gfortran-13 gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu
143s   icu-devtools libasan8 libatomic1 libblas-dev libblas3 libbz2-dev
143s   libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64
143s   libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev
143s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6
143s   libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8
143s   libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblerc4
143s   liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0
143s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0
143s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
143s   libpng-dev libpng16-16t64 libpsl5t64 libreadline-dev libreadline8t64
143s   libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0
143s   libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7
143s   libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64
143s   linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core
143s   r-base-dev r-bioc-biocgenerics r-bioc-graph r-bioc-hypergraph r-cran-runit
143s   rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev
143s Suggested packages:
143s   cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib
143s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
143s   gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev
143s   liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc
143s   libstdc++-13-doc tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib
143s   r-base-html texlive-base texlive-latex-base texlive-plain-generic
143s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
143s   texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase
143s   r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray
143s   r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy
143s   r-bioc-deseq2 r-bioc-annotate r-cran-sparsem r-cran-xml r-bioc-rbgl
143s   r-cran-cluster r-bioc-biocstyle r-cran-knitr
143s Recommended packages:
143s   bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended
143s   r-doc-html libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
143s   x11-utils x11-xserver-utils
143s The following packages will be REMOVED:
143s   libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3
143s The following NEW packages will be installed:
143s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu
143s   cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config
143s   fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu
143s   g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu
143s   gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu
143s   gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev
143s   libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev
143s   libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev
143s   libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b
143s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
143s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev
143s   liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev
143s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
143s   libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
143s   libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpsl5t64
143s   libreadline-dev libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev
143s   libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6
143s   libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1
143s   libxss1 libxt6t64 linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf
143s   pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-graph
143s   r-bioc-hypergraph r-cran-runit rpcsvc-proto unzip x11-common xdg-utils zip
143s   zlib1g-dev
143s The following packages will be upgraded:
143s   curl
143s 1 upgraded, 115 newly installed, 5 to remove and 0 not upgraded.
143s Need to get 133 MB/133 MB of archives.
143s After this operation, 425 MB of additional disk space will be used.
143s Get:1 /tmp/autopkgtest.TFbEgU/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [744 B]
143s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB]
143s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB]
143s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB]
143s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB]
144s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
144s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB]
144s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB]
144s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB]
144s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB]
144s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB]
144s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB]
144s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB]
144s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB]
144s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB]
144s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB]
144s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB]
145s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B]
145s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B]
145s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB]
145s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB]
145s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
145s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB]
145s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
145s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB]
145s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB]
145s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB]
145s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB]
145s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB]
145s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB]
145s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB]
146s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB]
146s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B]
146s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B]
146s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB]
146s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB]
146s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB]
146s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B]
146s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B]
146s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
146s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
146s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
146s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
146s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
146s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
146s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB]
146s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
146s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB]
146s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB]
147s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB]
147s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B]
147s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B]
147s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB]
147s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB]
147s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB]
147s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB]
147s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
147s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
147s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
147s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
147s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
147s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB]
147s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
147s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
147s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
147s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
147s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB]
147s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB]
147s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
147s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB]
147s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
147s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
147s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
147s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB]
147s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB]
147s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
147s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB]
147s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB]
147s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB]
147s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB]
147s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB]
147s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB]
147s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB]
147s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B]
147s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB]
147s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB]
147s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B]
147s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB]
147s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB]
147s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB]
147s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB]
147s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB]
147s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
147s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB]
147s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB]
147s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
147s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
147s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
147s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
147s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B]
147s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB]
147s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB]
148s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB]
148s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB]
148s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B]
148s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB]
148s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB]
148s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
148s Get:109 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB]
149s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB]
149s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B]
149s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
149s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB]
149s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-graph arm64 1.80.0-1 [1289 kB]
149s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-hypergraph all 1.74.0-1 [172 kB]
149s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB]
150s Preconfiguring packages ...
150s Fetched 133 MB in 6s (22.4 MB/s)
150s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested:
150s  wget depends on libpsl5 (>= 0.16.0).
150s  libcurl4:arm64 depends on libpsl5 (>= 0.16.0).
150s  libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0).
150s 
150s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74774 files and directories currently installed.)
150s Removing libpsl5:arm64 (0.21.2-1build1) ...
150s Selecting previously unselected package libpsl5t64:arm64.
150s (Reading database ... 
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74769 files and directories currently installed.)
150s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ...
150s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ...
151s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ...
151s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ...
151s (Reading database ... 
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(Reading database ... 45%
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74775 files and directories currently installed.)
151s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ...
151s Selecting previously unselected package libcurl4t64:arm64.
151s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74770 files and directories currently installed.)
151s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ...
151s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ...
151s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested:
151s  libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2).
151s  libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1).
151s 
151s (Reading database ... 
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(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74776 files and directories currently installed.)
151s Removing libpng16-16:arm64 (1.6.43-1) ...
151s Selecting previously unselected package libpng16-16t64:arm64.
151s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74766 files and directories currently installed.)
151s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ...
151s Unpacking libpng16-16t64:arm64 (1.6.43-3) ...
151s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
151s  parted depends on libreadline8 (>= 6.0).
151s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
151s  gpgsm depends on libreadline8 (>= 6.0).
151s  gpgconf depends on libreadline8 (>= 6.0).
151s  gpg depends on libreadline8 (>= 6.0).
151s  gawk depends on libreadline8 (>= 6.0).
151s  fdisk depends on libreadline8 (>= 6.0).
151s 
151s (Reading database ... 
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(Reading database ... 10%
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(Reading database ... 20%
(Reading database ... 25%
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(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74777 files and directories currently installed.)
151s Removing libreadline8:arm64 (8.2-3) ...
151s Selecting previously unselected package libreadline8t64:arm64.
151s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74765 files and directories currently installed.)
151s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ...
151s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
151s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
151s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
151s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
151s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
151s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested:
151s  lsof depends on libtirpc3 (>= 1.0.2).
151s  libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2).
151s  libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2).
151s  libnsl2:arm64 depends on libtirpc3 (>= 1.0.2).
151s  iproute2 depends on libtirpc3 (>= 1.0.2).
151s 
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151s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ...
151s Selecting previously unselected package libtirpc3t64:arm64.
151s (Reading database ... 
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151s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ...
151s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
151s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
151s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ...
151s Selecting previously unselected package libc-dev-bin.
151s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ...
151s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
151s Selecting previously unselected package linux-libc-dev:arm64.
151s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ...
151s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ...
152s Selecting previously unselected package libcrypt-dev:arm64.
152s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ...
152s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ...
152s Selecting previously unselected package libtirpc-dev:arm64.
152s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ...
152s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ...
152s Selecting previously unselected package libnsl-dev:arm64.
152s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ...
152s Unpacking libnsl-dev:arm64 (1.3.0-3) ...
152s Selecting previously unselected package rpcsvc-proto.
152s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ...
152s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
152s Selecting previously unselected package libc6-dev:arm64.
152s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ...
152s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ...
152s Selecting previously unselected package libisl23:arm64.
152s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ...
152s Unpacking libisl23:arm64 (0.26-3) ...
152s Selecting previously unselected package libmpc3:arm64.
152s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ...
152s Unpacking libmpc3:arm64 (1.3.1-1) ...
152s Selecting previously unselected package cpp-13-aarch64-linux-gnu.
152s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
152s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
152s Selecting previously unselected package cpp-13.
152s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ...
152s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
152s Selecting previously unselected package cpp-aarch64-linux-gnu.
152s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
152s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
152s Selecting previously unselected package cpp.
152s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ...
152s Unpacking cpp (4:13.2.0-7ubuntu1) ...
152s Selecting previously unselected package libcc1-0:arm64.
152s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ...
152s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ...
152s Selecting previously unselected package libgomp1:arm64.
152s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
152s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
152s Selecting previously unselected package libitm1:arm64.
152s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ...
152s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package libatomic1:arm64.
153s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
153s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package libasan8:arm64.
153s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ...
153s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package liblsan0:arm64.
153s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ...
153s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package libtsan2:arm64.
153s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ...
153s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package libubsan1:arm64.
153s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ...
153s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package libhwasan0:arm64.
153s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ...
153s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ...
153s Selecting previously unselected package libgcc-13-dev:arm64.
153s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ...
153s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
153s Selecting previously unselected package gcc-13-aarch64-linux-gnu.
153s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
153s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
153s Selecting previously unselected package gcc-13.
154s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ...
154s Unpacking gcc-13 (13.2.0-17ubuntu2) ...
154s Selecting previously unselected package gcc-aarch64-linux-gnu.
154s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
154s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
154s Selecting previously unselected package gcc.
154s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ...
154s Unpacking gcc (4:13.2.0-7ubuntu1) ...
154s Selecting previously unselected package libstdc++-13-dev:arm64.
154s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ...
154s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
154s Selecting previously unselected package g++-13-aarch64-linux-gnu.
154s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
154s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
154s Selecting previously unselected package g++-13.
154s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ...
154s Unpacking g++-13 (13.2.0-17ubuntu2) ...
154s Selecting previously unselected package g++-aarch64-linux-gnu.
154s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
154s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
154s Selecting previously unselected package g++.
154s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ...
154s Unpacking g++ (4:13.2.0-7ubuntu1) ...
154s Selecting previously unselected package build-essential.
154s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ...
154s Unpacking build-essential (12.10ubuntu1) ...
154s Selecting previously unselected package dctrl-tools.
154s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ...
154s Unpacking dctrl-tools (2.24-3build2) ...
154s Selecting previously unselected package fonts-dejavu-mono.
154s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ...
154s Unpacking fonts-dejavu-mono (2.37-8) ...
154s Selecting previously unselected package fonts-dejavu-core.
154s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ...
154s Unpacking fonts-dejavu-core (2.37-8) ...
154s Selecting previously unselected package fontconfig-config.
154s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
155s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
155s Selecting previously unselected package libfontconfig1:arm64.
155s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
155s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
155s Selecting previously unselected package fontconfig.
155s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ...
155s Unpacking fontconfig (2.15.0-1ubuntu1) ...
155s Selecting previously unselected package libgfortran5:arm64.
155s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
155s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
155s Selecting previously unselected package libgfortran-13-dev:arm64.
155s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ...
155s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ...
155s Selecting previously unselected package gfortran-13-aarch64-linux-gnu.
155s Preparing to unpack .../042-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
155s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
155s Selecting previously unselected package gfortran-13.
155s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_arm64.deb ...
155s Unpacking gfortran-13 (13.2.0-17ubuntu2) ...
155s Selecting previously unselected package gfortran-aarch64-linux-gnu.
155s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
155s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
155s Selecting previously unselected package gfortran.
155s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ...
155s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
155s Selecting previously unselected package icu-devtools.
155s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu1_arm64.deb ...
155s Unpacking icu-devtools (74.2-1ubuntu1) ...
155s Selecting previously unselected package libblas3:arm64.
155s Preparing to unpack .../047-libblas3_3.12.0-3_arm64.deb ...
155s Unpacking libblas3:arm64 (3.12.0-3) ...
155s Selecting previously unselected package libblas-dev:arm64.
155s Preparing to unpack .../048-libblas-dev_3.12.0-3_arm64.deb ...
155s Unpacking libblas-dev:arm64 (3.12.0-3) ...
155s Selecting previously unselected package libbz2-dev:arm64.
155s Preparing to unpack .../049-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ...
155s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ...
155s Selecting previously unselected package libpixman-1-0:arm64.
155s Preparing to unpack .../050-libpixman-1-0_0.42.2-1_arm64.deb ...
155s Unpacking libpixman-1-0:arm64 (0.42.2-1) ...
155s Selecting previously unselected package libxcb-render0:arm64.
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155s Unpacking libxcb-render0:arm64 (1.15-1) ...
155s Selecting previously unselected package libxcb-shm0:arm64.
155s Preparing to unpack .../052-libxcb-shm0_1.15-1_arm64.deb ...
155s Unpacking libxcb-shm0:arm64 (1.15-1) ...
156s Selecting previously unselected package libxrender1:arm64.
156s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
156s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
156s Selecting previously unselected package libcairo2:arm64.
156s Preparing to unpack .../054-libcairo2_1.18.0-1_arm64.deb ...
156s Unpacking libcairo2:arm64 (1.18.0-1) ...
156s Selecting previously unselected package libdatrie1:arm64.
156s Preparing to unpack .../055-libdatrie1_0.2.13-3_arm64.deb ...
156s Unpacking libdatrie1:arm64 (0.2.13-3) ...
156s Selecting previously unselected package libdeflate0:arm64.
156s Preparing to unpack .../056-libdeflate0_1.19-1_arm64.deb ...
156s Unpacking libdeflate0:arm64 (1.19-1) ...
156s Selecting previously unselected package libgraphite2-3:arm64.
156s Preparing to unpack .../057-libgraphite2-3_1.3.14-2_arm64.deb ...
156s Unpacking libgraphite2-3:arm64 (1.3.14-2) ...
156s Selecting previously unselected package libharfbuzz0b:arm64.
156s Preparing to unpack .../058-libharfbuzz0b_8.3.0-2_arm64.deb ...
156s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ...
156s Selecting previously unselected package x11-common.
156s Preparing to unpack .../059-x11-common_1%3a7.7+23ubuntu2_all.deb ...
156s Unpacking x11-common (1:7.7+23ubuntu2) ...
156s Selecting previously unselected package libice6:arm64.
156s Preparing to unpack .../060-libice6_2%3a1.0.10-1build2_arm64.deb ...
156s Unpacking libice6:arm64 (2:1.0.10-1build2) ...
156s Selecting previously unselected package libicu-dev:arm64.
156s Preparing to unpack .../061-libicu-dev_74.2-1ubuntu1_arm64.deb ...
156s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ...
157s Selecting previously unselected package libjpeg-turbo8:arm64.
157s Preparing to unpack .../062-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
157s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
157s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
157s Preparing to unpack .../063-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ...
157s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
157s Selecting previously unselected package libjpeg8:arm64.
157s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_arm64.deb ...
157s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
157s Selecting previously unselected package libjpeg8-dev:arm64.
157s Preparing to unpack .../065-libjpeg8-dev_8c-2ubuntu11_arm64.deb ...
157s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ...
157s Selecting previously unselected package libjpeg-dev:arm64.
157s Preparing to unpack .../066-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
157s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
157s Selecting previously unselected package liblapack3:arm64.
157s Preparing to unpack .../067-liblapack3_3.12.0-3_arm64.deb ...
157s Unpacking liblapack3:arm64 (3.12.0-3) ...
157s Selecting previously unselected package liblapack-dev:arm64.
157s Preparing to unpack .../068-liblapack-dev_3.12.0-3_arm64.deb ...
157s Unpacking liblapack-dev:arm64 (3.12.0-3) ...
157s Selecting previously unselected package liblerc4:arm64.
157s Preparing to unpack .../069-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
157s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
157s Selecting previously unselected package libncurses-dev:arm64.
157s Preparing to unpack .../070-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ...
157s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ...
157s Selecting previously unselected package libthai-data.
157s Preparing to unpack .../071-libthai-data_0.1.29-2_all.deb ...
157s Unpacking libthai-data (0.1.29-2) ...
157s Selecting previously unselected package libthai0:arm64.
157s Preparing to unpack .../072-libthai0_0.1.29-2_arm64.deb ...
157s Unpacking libthai0:arm64 (0.1.29-2) ...
157s Selecting previously unselected package libpango-1.0-0:arm64.
157s Preparing to unpack .../073-libpango-1.0-0_1.51.0+ds-4_arm64.deb ...
157s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ...
157s Selecting previously unselected package libpangoft2-1.0-0:arm64.
157s Preparing to unpack .../074-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ...
157s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
157s Selecting previously unselected package libpangocairo-1.0-0:arm64.
157s Preparing to unpack .../075-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ...
157s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
157s Selecting previously unselected package libpaper1:arm64.
157s Preparing to unpack .../076-libpaper1_1.1.29_arm64.deb ...
157s Unpacking libpaper1:arm64 (1.1.29) ...
157s Selecting previously unselected package libpaper-utils.
157s Preparing to unpack .../077-libpaper-utils_1.1.29_arm64.deb ...
157s Unpacking libpaper-utils (1.1.29) ...
157s Selecting previously unselected package libpcre2-16-0:arm64.
158s Preparing to unpack .../078-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ...
158s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ...
158s Selecting previously unselected package libpcre2-32-0:arm64.
158s Preparing to unpack .../079-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ...
158s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
158s Selecting previously unselected package libpcre2-posix3:arm64.
158s Preparing to unpack .../080-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ...
158s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ...
158s Selecting previously unselected package libpcre2-dev:arm64.
158s Preparing to unpack .../081-libpcre2-dev_10.42-4ubuntu1_arm64.deb ...
158s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ...
158s Selecting previously unselected package libpkgconf3:arm64.
158s Preparing to unpack .../082-libpkgconf3_1.8.1-2_arm64.deb ...
158s Unpacking libpkgconf3:arm64 (1.8.1-2) ...
158s Selecting previously unselected package zlib1g-dev:arm64.
158s Preparing to unpack .../083-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ...
158s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ...
158s Selecting previously unselected package libpng-dev:arm64.
158s Preparing to unpack .../084-libpng-dev_1.6.43-3_arm64.deb ...
158s Unpacking libpng-dev:arm64 (1.6.43-3) ...
158s Selecting previously unselected package libreadline-dev:arm64.
158s Preparing to unpack .../085-libreadline-dev_8.2-3.1_arm64.deb ...
158s Unpacking libreadline-dev:arm64 (8.2-3.1) ...
158s Selecting previously unselected package libsharpyuv0:arm64.
158s Preparing to unpack .../086-libsharpyuv0_1.3.2-0.4_arm64.deb ...
158s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ...
158s Selecting previously unselected package libsm6:arm64.
158s Preparing to unpack .../087-libsm6_2%3a1.2.3-1build2_arm64.deb ...
158s Unpacking libsm6:arm64 (2:1.2.3-1build2) ...
158s Selecting previously unselected package libtcl8.6:arm64.
158s Preparing to unpack .../088-libtcl8.6_8.6.13+dfsg-2_arm64.deb ...
158s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ...
158s Selecting previously unselected package libjbig0:arm64.
158s Preparing to unpack .../089-libjbig0_2.1-6.1ubuntu1_arm64.deb ...
158s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
158s Selecting previously unselected package libwebp7:arm64.
158s Preparing to unpack .../090-libwebp7_1.3.2-0.4_arm64.deb ...
158s Unpacking libwebp7:arm64 (1.3.2-0.4) ...
158s Selecting previously unselected package libtiff6:arm64.
158s Preparing to unpack .../091-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
158s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
158s Selecting previously unselected package libxft2:arm64.
158s Preparing to unpack .../092-libxft2_2.3.6-1_arm64.deb ...
158s Unpacking libxft2:arm64 (2.3.6-1) ...
158s Selecting previously unselected package libxss1:arm64.
158s Preparing to unpack .../093-libxss1_1%3a1.2.3-1build2_arm64.deb ...
158s Unpacking libxss1:arm64 (1:1.2.3-1build2) ...
158s Selecting previously unselected package libtk8.6:arm64.
158s Preparing to unpack .../094-libtk8.6_8.6.13-2_arm64.deb ...
158s Unpacking libtk8.6:arm64 (8.6.13-2) ...
158s Selecting previously unselected package libxt6t64:arm64.
158s Preparing to unpack .../095-libxt6t64_1%3a1.2.1-1.2_arm64.deb ...
158s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ...
158s Selecting previously unselected package pkgconf-bin.
158s Preparing to unpack .../096-pkgconf-bin_1.8.1-2_arm64.deb ...
158s Unpacking pkgconf-bin (1.8.1-2) ...
158s Selecting previously unselected package pkgconf:arm64.
158s Preparing to unpack .../097-pkgconf_1.8.1-2_arm64.deb ...
158s Unpacking pkgconf:arm64 (1.8.1-2) ...
158s Selecting previously unselected package pkg-config:arm64.
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158s Unpacking pkg-config:arm64 (1.8.1-2) ...
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158s Unpacking unzip (6.0-28ubuntu3) ...
159s Selecting previously unselected package xdg-utils.
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159s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ...
159s Selecting previously unselected package r-base-core.
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159s Unpacking r-base-core (4.3.3-2build1) ...
159s Selecting previously unselected package liblzma-dev:arm64.
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159s Selecting previously unselected package r-bioc-biocgenerics.
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159s Unpacking r-bioc-graph (1.80.0-1) ...
159s Selecting previously unselected package r-bioc-hypergraph.
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159s Setting up libgraphite2-3:arm64 (1.3.14-2) ...
159s Setting up libpixman-1-0:arm64 (0.42.2-1) ...
159s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
159s Setting up libpaper1:arm64 (1.1.29) ...
160s 
160s Creating config file /etc/papersize with new version
160s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
160s Setting up libxrender1:arm64 (1:0.9.10-1.1) ...
160s Setting up libdatrie1:arm64 (0.2.13-3) ...
160s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ...
160s Setting up libxcb-render0:arm64 (1.15-1) ...
160s Setting up unzip (6.0-28ubuntu3) ...
160s Setting up x11-common (1:7.7+23ubuntu2) ...
160s Setting up libpsl5t64:arm64 (0.21.2-1.1) ...
160s Setting up libdeflate0:arm64 (1.19-1) ...
160s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ...
160s Setting up libxcb-shm0:arm64 (1.15-1) ...
160s Setting up libpaper-utils (1.1.29) ...
160s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
160s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ...
160s Setting up zip (3.0-13) ...
160s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
160s Setting up libblas3:arm64 (3.12.0-3) ...
160s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
160s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ...
160s Setting up libpkgconf3:arm64 (1.8.1-2) ...
160s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
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160s Setting up libpng16-16t64:arm64 (1.6.43-3) ...
160s Setting up libmpc3:arm64 (1.3.1-1) ...
160s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ...
160s Setting up icu-devtools (74.2-1ubuntu1) ...
160s Setting up fonts-dejavu-core (2.37-8) ...
160s Setting up pkgconf-bin (1.8.1-2) ...
160s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
160s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libwebp7:arm64 (1.3.2-0.4) ...
160s Setting up libreadline8t64:arm64 (8.2-3.1) ...
160s Setting up liblzma-dev:arm64 (5.4.5-0.3) ...
160s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ...
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160s Setting up libxss1:arm64 (1:1.2.3-1build2) ...
160s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libisl23:arm64 (0.26-3) ...
160s Setting up libc-dev-bin (2.39-0ubuntu2) ...
160s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
160s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
160s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ...
160s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libblas-dev:arm64 (3.12.0-3) ...
160s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
160s Setting up dctrl-tools (2.24-3build2) ...
160s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ...
160s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
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160s Setting up liblapack3:arm64 (3.12.0-3) ...
160s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
160s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
160s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ...
160s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
160s Setting up pkgconf:arm64 (1.8.1-2) ...
160s Setting up libthai0:arm64 (0.1.29-2) ...
160s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
160s Setting up liblapack-dev:arm64 (3.12.0-3) ...
160s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
160s Setting up pkg-config:arm64 (1.8.1-2) ...
160s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
160s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
160s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ...
160s Setting up curl (8.5.0-2ubuntu7) ...
160s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
160s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ...
160s Setting up libsm6:arm64 (2:1.2.3-1build2) ...
160s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ...
160s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
160s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ...
160s Setting up fontconfig (2.15.0-1ubuntu1) ...
163s Regenerating fonts cache... done.
163s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ...
163s Setting up libxft2:arm64 (2.3.6-1) ...
163s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ...
163s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ...
163s Setting up cpp-13 (13.2.0-17ubuntu2) ...
163s Setting up libtk8.6:arm64 (8.6.13-2) ...
163s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ...
163s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
163s Setting up libreadline-dev:arm64 (8.2-3.1) ...
163s Setting up libcairo2:arm64 (1.18.0-1) ...
163s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ...
163s Setting up gcc-13 (13.2.0-17ubuntu2) ...
163s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ...
163s Setting up cpp (4:13.2.0-7ubuntu1) ...
163s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
163s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
163s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
163s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
163s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
163s Setting up g++-13 (13.2.0-17ubuntu2) ...
163s Setting up libpng-dev:arm64 (1.6.43-3) ...
163s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
163s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
163s Setting up gcc (4:13.2.0-7ubuntu1) ...
163s Setting up gfortran-13 (13.2.0-17ubuntu2) ...
163s Setting up r-base-core (4.3.3-2build1) ...
163s 
163s Creating config file /etc/R/Renviron with new version
163s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
163s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
163s Setting up r-bioc-biocgenerics (0.48.1-2) ...
163s Setting up gfortran (4:13.2.0-7ubuntu1) ...
163s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
163s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
163s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
163s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
163s Setting up r-cran-runit (0.4.32-3) ...
163s Setting up g++ (4:13.2.0-7ubuntu1) ...
163s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
163s Setting up build-essential (12.10ubuntu1) ...
163s Setting up r-bioc-graph (1.80.0-1) ...
163s Setting up r-base-dev (4.3.3-2build1) ...
163s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
163s Setting up r-bioc-hypergraph (1.74.0-1) ...
163s Setting up autopkgtest-satdep (0) ...
163s Processing triggers for man-db (2.12.0-3) ...
164s Processing triggers for install-info (7.1-3) ...
164s Processing triggers for libc-bin (2.39-0ubuntu2) ...
170s (Reading database ... 80572 files and directories currently installed.)
170s Removing autopkgtest-satdep (0) ...
171s autopkgtest [17:37:20]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
171s autopkgtest [17:37:20]: test pkg-r-autopkgtest: [-----------------------
171s Test: Try to load the R library hypergraph
171s 
171s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
171s Copyright (C) 2024 The R Foundation for Statistical Computing
171s Platform: aarch64-unknown-linux-gnu (64-bit)
171s 
171s R is free software and comes with ABSOLUTELY NO WARRANTY.
171s You are welcome to redistribute it under certain conditions.
171s Type 'license()' or 'licence()' for distribution details.
171s 
171s R is a collaborative project with many contributors.
171s Type 'contributors()' for more information and
171s 'citation()' on how to cite R or R packages in publications.
171s 
171s Type 'demo()' for some demos, 'help()' for on-line help, or
171s 'help.start()' for an HTML browser interface to help.
171s Type 'q()' to quit R.
171s 
171s > library('hypergraph')
171s Loading required package: graph
171s Loading required package: BiocGenerics
172s 
172s Attaching package: ‘BiocGenerics’
172s 
172s The following objects are masked from ‘package:stats’:
172s 
172s     IQR, mad, sd, var, xtabs
172s 
172s The following objects are masked from ‘package:base’:
172s 
172s     anyDuplicated, aperm, append, as.data.frame, basename, cbind,
172s     colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
172s     get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
172s     match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
172s     Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort,
172s     table, tapply, union, unique, unsplit, which.max, which.min
172s 
172s > 
172s > 
172s Other tests are currently unsupported!
172s They will be progressively added.
172s autopkgtest [17:37:21]: test pkg-r-autopkgtest: -----------------------]
173s pkg-r-autopkgtest    PASS
173s autopkgtest [17:37:22]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
173s autopkgtest [17:37:22]: @@@@@@@@@@@@@@@@@@@@ summary
173s pkg-r-autopkgtest    PASS
186s Creating nova instance adt-noble-arm64-r-bioc-hypergraph-20240316-173429-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...