0s autopkgtest [17:34:13]: starting date and time: 2024-03-16 17:34:13+0000 0s autopkgtest [17:34:13]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:34:13]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.khp52hik/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-hdf5array --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-13.secgroup --name adt-noble-arm64-r-bioc-hdf5array-20240316-173413-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 345s autopkgtest [17:39:58]: testbed dpkg architecture: arm64 346s autopkgtest [17:39:59]: testbed apt version: 2.7.12 346s autopkgtest [17:39:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 349s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 351s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 351s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 351s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 351s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 353s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 354s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 354s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 354s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 354s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 356s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 356s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 356s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 377s Fetched 9060 kB in 14s (669 kB/s) 378s Reading package lists... 392s Reading package lists... 394s Building dependency tree... 394s Reading state information... 399s Calculating upgrade... 401s The following packages will be REMOVED: 401s libglib2.0-0 libssl3 401s The following NEW packages will be installed: 401s libglib2.0-0t64 libssl3t64 xdg-user-dirs 401s The following packages have been kept back: 401s curl 401s The following packages will be upgraded: 401s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 401s 5 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 401s Need to get 4592 kB of archives. 401s After this operation, 211 kB of additional disk space will be used. 401s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 402s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 402s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 402s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 402s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 402s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 403s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 403s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 408s Fetched 4592 kB in 1s (3500 kB/s) 411s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 411s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 411s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 412s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 412s udisks2 depends on libglib2.0-0 (>= 2.77.0). 412s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 412s python3-gi depends on libglib2.0-0 (>= 2.77.0). 412s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 412s netplan.io depends on libglib2.0-0 (>= 2.70.0). 412s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 412s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 412s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 412s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 412s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 412s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 412s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 412s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 412s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 412s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 412s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 412s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 412s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 412s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 412s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 412s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 412s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 412s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 412s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 412s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 412s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 412s fwupd depends on libglib2.0-0 (>= 2.79.0). 412s bolt depends on libglib2.0-0 (>= 2.56.0). 412s 412s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 412s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 413s Selecting previously unselected package libglib2.0-0t64:arm64. 413s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75825 files and directories currently installed.) 414s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 414s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 414s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 414s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 414s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 414s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 415s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 415s wget depends on libssl3 (>= 3.0.0). 415s u-boot-tools depends on libssl3 (>= 3.0.0). 415s tnftp depends on libssl3 (>= 3.0.0). 415s tcpdump depends on libssl3 (>= 3.0.0). 415s systemd-resolved depends on libssl3 (>= 3.0.0). 415s systemd depends on libssl3 (>= 3.0.0). 415s sudo depends on libssl3 (>= 3.0.0). 415s sbsigntool depends on libssl3 (>= 3.0.0). 415s rsync depends on libssl3 (>= 3.0.0). 415s python3-cryptography depends on libssl3 (>= 3.0.0). 415s openssh-server depends on libssl3 (>= 3.0.10). 415s openssh-client depends on libssl3 (>= 3.0.10). 415s mtd-utils depends on libssl3 (>= 3.0.0). 415s mokutil depends on libssl3 (>= 3.0.0). 415s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 415s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 415s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 415s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 415s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 415s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 415s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 415s libnvme1 depends on libssl3 (>= 3.0.0). 415s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 415s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 415s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 415s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 415s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 415s kmod depends on libssl3 (>= 3.0.0). 415s dhcpcd-base depends on libssl3 (>= 3.0.0). 415s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 415s 415s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 415s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 415s Selecting previously unselected package libssl3t64:arm64. 416s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75839 files and directories currently installed.) 416s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 416s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 417s Preparing to unpack .../libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 417s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 417s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 417s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 417s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 417s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 417s Selecting previously unselected package xdg-user-dirs. 417s Preparing to unpack .../xdg-user-dirs_0.18-1_arm64.deb ... 417s Unpacking xdg-user-dirs (0.18-1) ... 418s Setting up xdg-user-dirs (0.18-1) ... 418s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 418s Setting up libtirpc-common (1.3.4+ds-1.1) ... 418s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 418s No schema files found: doing nothing. 418s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 418s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 418s Setting up openssl (3.0.13-0ubuntu1) ... 418s Setting up readline-common (8.2-3.1) ... 418s Processing triggers for man-db (2.12.0-3) ... 425s Processing triggers for install-info (7.1-3) ... 426s Processing triggers for libc-bin (2.39-0ubuntu2) ... 428s Reading package lists... 430s Building dependency tree... 430s Reading state information... 436s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 438s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 438s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 438s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 438s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 454s Reading package lists... 454s Reading package lists... 456s Building dependency tree... 456s Reading state information... 460s Calculating upgrade... 463s The following packages have been kept back: 463s curl 463s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 463s Reading package lists... 464s Building dependency tree... 464s Reading state information... 468s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 478s autopkgtest [17:42:11]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 479s autopkgtest [17:42:12]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-hdf5array 486s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-hdf5array 1.30.1-1 (dsc) [2312 B] 486s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-hdf5array 1.30.1-1 (tar) [8098 kB] 486s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-hdf5array 1.30.1-1 (diff) [6180 B] 487s gpgv: Signature made Tue Feb 20 13:31:09 2024 UTC 487s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 487s gpgv: issuer "tille@debian.org" 487s gpgv: Can't check signature: No public key 487s dpkg-source: warning: cannot verify inline signature for ./r-bioc-hdf5array_1.30.1-1.dsc: no acceptable signature found 489s autopkgtest [17:42:22]: testing package r-bioc-hdf5array version 1.30.1-1 491s autopkgtest [17:42:24]: build not needed 498s autopkgtest [17:42:31]: test pkg-r-autopkgtest: preparing testbed 504s Reading package lists... 505s Building dependency tree... 505s Reading state information... 507s Starting pkgProblemResolver with broken count: 0 508s Starting 2 pkgProblemResolver with broken count: 0 508s Done 512s The following additional packages will be installed: 512s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 512s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 512s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 512s fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 512s gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 512s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 512s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 512s libblas-dev libblas3 libblosc1 libboost-dev libboost1.83-dev libbz2-dev 512s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4-openssl-dev 512s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 512s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 512s libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 512s libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libhwasan0 libice6 512s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 512s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 512s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 512s libjs-jquery-datatables libjs-jquery-datatables-extensions 512s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 512s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 512s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 512s liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 512s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 512s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 512s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpsl5t64 512s libreadline-dev libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev 512s libstdc++-13-dev libsz2 libtcl8.6 libthai-data libthai0 libtiff6 512s libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 512s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 512s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 512s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 512s r-base-dev r-bioc-annotate r-bioc-annotationdbi r-bioc-annotationhub 512s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio 512s r-bioc-biocparallel r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 512s r-bioc-delayedarray r-bioc-delayedmatrixstats r-bioc-experimenthub 512s r-bioc-genefilter r-bioc-genomeinfodb r-bioc-genomeinfodbdata 512s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 512s r-bioc-hdf5array r-bioc-interactivedisplaybase r-bioc-iranges 512s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 512s r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 512s r-bioc-s4arrays r-bioc-s4vectors r-bioc-singlecellexperiment 512s r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment 512s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 512s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 512s r-cran-blob r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools 512s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 512s r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-dt 512s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-filelock 512s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 512s r-cran-futile.options r-cran-generics r-cran-glue r-cran-highr r-cran-hms 512s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 512s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 512s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 512s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 512s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 512s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 512s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr 512s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 512s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 512s r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr 512s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 512s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 512s unzip x11-common xdg-utils zip zlib1g-dev 512s Suggested packages: 512s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 512s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 512s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 512s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 512s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 512s libboost-context1.83-dev libboost-contract1.83-dev 512s libboost-coroutine1.83-dev libboost-date-time1.83-dev 512s libboost-exception1.83-dev libboost-fiber1.83-dev 512s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 512s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 512s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 512s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 512s libboost-numpy1.83-dev libboost-program-options1.83-dev 512s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 512s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 512s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 512s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 512s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 512s glibc-doc libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev 512s libssh2-1-dev libhdf5-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras 512s fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libssl-doc 512s libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex 512s texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf 512s librsvg2-bin groff ghc php python ruby libjs-katex 512s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 512s r-base-html texlive-base texlive-latex-base texlive-plain-generic 512s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 512s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-biocstyle 512s r-bioc-variantannotation r-bioc-ensembldb r-bioc-all r-cran-testthat 512s r-bioc-affy r-bioc-deseq2 r-cran-foreach r-cran-bbmisc r-cran-doparallel 512s r-bioc-shortread r-cran-batchtools r-cran-data.table r-cran-mockery 512s r-cran-webmockr r-bioc-bsgenome r-cran-lobstr r-cran-profmem r-cran-class 512s r-cran-rcolorbrewer r-cran-r.utils r-bioc-edger r-bioc-annotationfilter 512s r-cran-markdown r-bioc-gviz r-bioc-dexseq r-cran-bench r-cran-ggplot2 512s r-cran-tinytest r-bioc-limma r-bioc-scrnaseq r-cran-rtsne r-cran-roxygen2 512s r-cran-ff r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-lubridate 512s r-cran-getopt r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 512s r-cran-scales r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 512s r-cran-rlecuyer r-cran-spelling r-cran-brio r-cran-callr r-cran-here 512s r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo 512s Recommended packages: 512s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 512s r-recommended r-doc-html r-cran-testthat r-cran-remotes r-cran-ggplot2 512s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 512s r-cran-ps r-cran-rprojroot r-cran-rstudioapi r-cran-whoami r-cran-bench 512s r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales 512s r-cran-spelling r-cran-webutils r-cran-rpostgresql r-cran-broom 512s r-cran-rmysql r-cran-future r-cran-testit w3m | www-browser r-cran-unitizer 512s r-cran-rsvg r-cran-pkgload r-cran-waldo r-cran-cairo r-cran-markdown 512s r-cran-ragg r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf r-cran-gridsvg 512s r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-webshot 512s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 512s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-usethis 512s r-cran-dygraphs r-cran-rsconnect r-cran-downlit r-cran-dbitest r-cran-gert 512s r-cran-gh r-cran-rvest r-cran-data.table r-cran-mockr r-cran-formattable 512s r-cran-pkgdown r-cran-zeallot r-cran-renv libfile-mimeinfo-perl 512s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 513s The following packages will be REMOVED: 513s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 513s The following NEW packages will be installed: 513s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 513s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 513s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 513s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 513s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 513s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 513s gfortran-aarch64-linux-gnu hdf5-helpers icu-devtools javascript-common 513s libaec-dev libaec0 libasan8 libatomic1 libblas-dev libblas3 libblosc1 513s libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 513s libcc1-0 libcrypt-dev libcurl4-openssl-dev libcurl4t64 libdatrie1 513s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 513s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 513s libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 513s libhdf5-hl-fortran-100 libhwasan0 libice6 libicu-dev libisl23 libitm1 513s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 513s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 513s libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions 513s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 513s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 513s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 513s liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 513s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 513s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 513s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpsl5t64 513s libreadline-dev libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev 513s libstdc++-13-dev libsz2 libtcl8.6 libthai-data libthai0 libtiff6 513s libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 513s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 513s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 513s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 513s r-base-dev r-bioc-annotate r-bioc-annotationdbi r-bioc-annotationhub 513s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio 513s r-bioc-biocparallel r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 513s r-bioc-delayedarray r-bioc-delayedmatrixstats r-bioc-experimenthub 513s r-bioc-genefilter r-bioc-genomeinfodb r-bioc-genomeinfodbdata 513s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 513s r-bioc-hdf5array r-bioc-interactivedisplaybase r-bioc-iranges 513s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 513s r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 513s r-bioc-s4arrays r-bioc-s4vectors r-bioc-singlecellexperiment 513s r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment 513s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 513s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 513s r-cran-blob r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools 513s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 513s r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-dt 513s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-filelock 513s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 513s r-cran-futile.options r-cran-generics r-cran-glue r-cran-highr r-cran-hms 513s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 513s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 513s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 513s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 513s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 513s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 513s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr 513s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 513s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 513s r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr 513s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 513s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 513s unzip x11-common xdg-utils zip zlib1g-dev 513s The following packages will be upgraded: 513s curl 513s 1 upgraded, 290 newly installed, 5 to remove and 0 not upgraded. 513s Need to get 328 MB/328 MB of archives. 513s After this operation, 1129 MB of additional disk space will be used. 513s Get:1 /tmp/autopkgtest.oAlWzC/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [832 B] 514s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 514s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 514s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 514s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 514s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 514s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 514s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 514s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 515s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 515s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 515s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 515s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 515s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 515s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 515s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 515s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 517s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 517s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 517s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 517s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 517s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 517s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 517s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 517s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 517s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 518s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 518s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 518s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 518s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 519s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 521s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 521s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 521s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 521s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 521s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 523s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 523s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 523s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 523s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 523s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 523s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 523s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 523s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 523s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 523s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 523s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 523s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 523s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 523s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 523s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 524s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 525s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 525s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 525s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 525s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 hdf5-helpers arm64 1.10.10+repack-3ubuntu1 [15.5 kB] 525s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 525s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 525s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 525s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 525s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 525s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB] 525s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB] 525s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 527s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 527s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 527s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 527s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 527s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 527s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 527s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 528s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4-openssl-dev arm64 8.5.0-2ubuntu7 [454 kB] 528s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 528s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 528s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 528s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 528s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 528s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 528s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-cpp-103-1 arm64 1.10.10+repack-3ubuntu1 [120 kB] 528s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-fortran-102 arm64 1.10.10+repack-3ubuntu1 [86.3 kB] 528s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 528s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-fortran-100 arm64 1.10.10+repack-3ubuntu1 [30.7 kB] 528s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-cpp-100 arm64 1.10.10+repack-3ubuntu1 [10.7 kB] 528s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 528s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 528s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 528s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 528s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 528s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 528s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec-dev arm64 1.1.2-1 [18.8 kB] 528s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl-dev arm64 3.0.13-0ubuntu1 [2335 kB] 529s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-dev arm64 1.10.10+repack-3ubuntu1 [3036 kB] 529s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 529s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 529s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 531s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 531s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 531s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 531s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 531s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 531s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 531s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 531s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 531s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 532s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 532s Get:106 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 532s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 532s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 532s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 532s Get:110 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 532s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 532s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 533s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 533s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 533s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 533s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 533s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 533s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 533s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 533s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 533s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 533s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 533s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 533s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 533s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 534s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 534s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 534s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 534s Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 534s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 534s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 534s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 534s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 534s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 534s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 534s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 534s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 534s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 534s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 534s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 534s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 534s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 534s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 534s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 538s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 538s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 538s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 538s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 538s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 538s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 538s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 542s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 542s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 542s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 542s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 542s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 543s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 543s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 543s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 543s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 543s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 543s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 544s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 544s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 544s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 544s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 544s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 544s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 544s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 544s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 544s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 544s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 544s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 544s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 544s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 545s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 545s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 545s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 545s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 545s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 545s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 545s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 545s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 545s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 545s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 545s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 545s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 545s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 547s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 547s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 547s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 549s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 549s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 550s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 550s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 550s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotate all 1.80.0+dfsg-1 [1730 kB] 550s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 550s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 550s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 550s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 550s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 550s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 550s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 551s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 551s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 552s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 552s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 552s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 553s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 553s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 553s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 553s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 553s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 553s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocversion all 3.18.1-1 [11.0 kB] 553s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 553s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 553s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 554s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 554s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 554s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 554s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 554s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 554s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 554s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 554s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 554s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 554s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 554s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 554s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 554s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 554s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 555s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 555s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 555s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 555s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 556s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 556s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 556s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 556s Get:239 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 557s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 557s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 557s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 557s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 557s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 557s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 557s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 557s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dt all 0.31+dfsg-1 [265 kB] 557s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 557s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 557s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 557s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 557s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 557s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 557s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 557s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 557s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 557s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 557s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 557s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 557s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 557s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 557s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 558s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 558s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 558s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 558s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 558s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 558s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 558s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 558s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 558s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 558s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsematrixstats arm64 1.14.0+dfsg-1 [815 kB] 559s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedmatrixstats all 1.24.0+ds-1 [483 kB] 559s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-experimenthub all 2.10.0+ds-1 [79.9 kB] 559s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 559s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genefilter arm64 1.84.0-1 [1122 kB] 559s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 559s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 559s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 560s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 560s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 560s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 560s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 560s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 561s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 561s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5lib arm64 1.24.2+dfsg-1 [96.1 kB] 561s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5filters arm64 1.14.1+dfsg-3 [135 kB] 561s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5 arm64 2.46.1+dfsg-1 [805 kB] 561s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-hdf5array arm64 1.30.1-1 [8757 kB] 563s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-singlecellexperiment all 1.24.0+ds-1 [828 kB] 563s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB] 569s Preconfiguring packages ... 569s Fetched 328 MB in 50s (6614 kB/s) 569s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 569s wget depends on libpsl5 (>= 0.16.0). 569s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 569s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 569s 570s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75866 files and directories currently installed.) 570s Removing libpsl5:arm64 (0.21.2-1build1) ... 570s Selecting previously unselected package libpsl5t64:arm64. 570s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75861 files and directories currently installed.) 570s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 570s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 571s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 571s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 572s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75867 files and directories currently installed.) 572s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 572s Selecting previously unselected package libcurl4t64:arm64. 573s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75862 files and directories currently installed.) 573s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 573s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 573s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 573s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 573s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 573s 573s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75868 files and directories currently installed.) 573s Removing libpng16-16:arm64 (1.6.43-1) ... 574s Selecting previously unselected package libpng16-16t64:arm64. 574s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 574s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 574s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 575s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 575s parted depends on libreadline8 (>= 6.0). 575s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 575s libpython3.11-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 575s gpgsm depends on libreadline8 (>= 6.0). 575s gpgconf depends on libreadline8 (>= 6.0). 575s gpg depends on libreadline8 (>= 6.0). 575s gawk depends on libreadline8 (>= 6.0). 575s fdisk depends on libreadline8 (>= 6.0). 575s 575s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75869 files and directories currently installed.) 576s Removing libreadline8:arm64 (8.2-3) ... 576s Selecting previously unselected package libreadline8t64:arm64. 576s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75857 files and directories currently installed.) 576s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 576s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 576s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 576s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 576s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 576s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 577s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 577s lsof depends on libtirpc3 (>= 1.0.2). 577s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 577s libpython3.11-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 577s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 577s iproute2 depends on libtirpc3 (>= 1.0.2). 577s 577s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75877 files and directories currently installed.) 577s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 578s Selecting previously unselected package libtirpc3t64:arm64. 578s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75871 files and directories currently installed.) 578s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 578s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 578s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 578s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 578s Selecting previously unselected package libc-dev-bin. 578s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 578s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 578s Selecting previously unselected package linux-libc-dev:arm64. 578s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 578s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 581s Selecting previously unselected package libcrypt-dev:arm64. 581s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 581s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 581s Selecting previously unselected package libtirpc-dev:arm64. 581s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 581s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 582s Selecting previously unselected package libnsl-dev:arm64. 582s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 582s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 582s Selecting previously unselected package rpcsvc-proto. 582s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 582s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 582s Selecting previously unselected package libc6-dev:arm64. 582s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 582s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 583s Selecting previously unselected package libisl23:arm64. 584s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 584s Unpacking libisl23:arm64 (0.26-3) ... 584s Selecting previously unselected package libmpc3:arm64. 584s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 584s Unpacking libmpc3:arm64 (1.3.1-1) ... 584s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 584s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 584s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 586s Selecting previously unselected package cpp-13. 586s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 586s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 586s Selecting previously unselected package cpp-aarch64-linux-gnu. 586s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 586s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 587s Selecting previously unselected package cpp. 587s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 587s Unpacking cpp (4:13.2.0-7ubuntu1) ... 587s Selecting previously unselected package libcc1-0:arm64. 587s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 587s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 587s Selecting previously unselected package libgomp1:arm64. 587s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 587s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 587s Selecting previously unselected package libitm1:arm64. 587s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 587s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 588s Selecting previously unselected package libatomic1:arm64. 588s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 588s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 588s Selecting previously unselected package libasan8:arm64. 588s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 588s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 589s Selecting previously unselected package liblsan0:arm64. 589s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 589s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 590s Selecting previously unselected package libtsan2:arm64. 590s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 590s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 590s Selecting previously unselected package libubsan1:arm64. 590s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 590s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 591s Selecting previously unselected package libhwasan0:arm64. 591s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 591s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 591s Selecting previously unselected package libgcc-13-dev:arm64. 591s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 591s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 592s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 592s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 592s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 597s Selecting previously unselected package gcc-13. 597s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 597s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 597s Selecting previously unselected package gcc-aarch64-linux-gnu. 597s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 597s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 597s Selecting previously unselected package gcc. 597s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 597s Unpacking gcc (4:13.2.0-7ubuntu1) ... 597s Selecting previously unselected package libstdc++-13-dev:arm64. 597s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 597s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 599s Selecting previously unselected package g++-13-aarch64-linux-gnu. 599s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 599s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 600s Selecting previously unselected package g++-13. 600s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 600s Unpacking g++-13 (13.2.0-17ubuntu2) ... 600s Selecting previously unselected package g++-aarch64-linux-gnu. 600s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 600s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 600s Selecting previously unselected package g++. 600s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 600s Unpacking g++ (4:13.2.0-7ubuntu1) ... 600s Selecting previously unselected package build-essential. 600s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 600s Unpacking build-essential (12.10ubuntu1) ... 601s Selecting previously unselected package dctrl-tools. 601s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 601s Unpacking dctrl-tools (2.24-3build2) ... 601s Selecting previously unselected package fonts-dejavu-mono. 601s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 601s Unpacking fonts-dejavu-mono (2.37-8) ... 601s Selecting previously unselected package fonts-dejavu-core. 601s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 601s Unpacking fonts-dejavu-core (2.37-8) ... 601s Selecting previously unselected package fontconfig-config. 601s Preparing to unpack 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fonts-mathjax. 605s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 605s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 606s Selecting previously unselected package libgfortran5:arm64. 606s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 606s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 606s Selecting previously unselected package libgfortran-13-dev:arm64. 606s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 606s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 606s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 606s Preparing to unpack .../045-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 606s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 608s Selecting previously unselected package gfortran-13. 608s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 608s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 609s Selecting previously unselected package gfortran-aarch64-linux-gnu. 609s Preparing to unpack .../047-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 609s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 609s Selecting previously unselected package gfortran. 609s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 609s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 609s Selecting previously unselected package hdf5-helpers. 610s Preparing to unpack .../049-hdf5-helpers_1.10.10+repack-3ubuntu1_arm64.deb ... 610s Unpacking hdf5-helpers (1.10.10+repack-3ubuntu1) ... 610s Selecting previously unselected package icu-devtools. 610s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 610s Unpacking icu-devtools (74.2-1ubuntu1) ... 610s Selecting previously unselected package javascript-common. 610s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 610s Unpacking javascript-common (11+nmu1) ... 610s Selecting previously unselected package libaec0:arm64. 610s Preparing to unpack .../052-libaec0_1.1.2-1_arm64.deb ... 610s Unpacking libaec0:arm64 (1.1.2-1) ... 610s Selecting previously unselected package libblas3:arm64. 610s Preparing to unpack .../053-libblas3_3.12.0-3_arm64.deb ... 610s Unpacking libblas3:arm64 (3.12.0-3) ... 611s Selecting previously unselected package libblas-dev:arm64. 611s Preparing to unpack .../054-libblas-dev_3.12.0-3_arm64.deb ... 611s Unpacking libblas-dev:arm64 (3.12.0-3) ... 611s Selecting previously unselected package libsnappy1v5:arm64. 611s Preparing to unpack .../055-libsnappy1v5_1.1.10-1_arm64.deb ... 611s Unpacking libsnappy1v5:arm64 (1.1.10-1) ... 611s Selecting previously unselected package libblosc1:arm64. 611s Preparing to unpack .../056-libblosc1_1.21.5+ds-1_arm64.deb ... 611s Unpacking libblosc1:arm64 (1.21.5+ds-1) ... 611s Selecting previously unselected package libboost1.83-dev:arm64. 611s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 611s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 643s Selecting previously unselected package libboost-dev:arm64. 643s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 643s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 643s Selecting previously unselected package libbz2-dev:arm64. 643s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 643s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 643s Selecting previously unselected package libpixman-1-0:arm64. 643s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_arm64.deb ... 643s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 643s Selecting previously unselected package libxcb-render0:arm64. 644s Preparing to unpack .../061-libxcb-render0_1.15-1_arm64.deb ... 644s Unpacking libxcb-render0:arm64 (1.15-1) ... 644s Selecting previously unselected package libxcb-shm0:arm64. 644s Preparing to unpack .../062-libxcb-shm0_1.15-1_arm64.deb ... 644s Unpacking libxcb-shm0:arm64 (1.15-1) ... 644s Selecting previously unselected package libxrender1:arm64. 644s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 644s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 644s Selecting previously unselected package libcairo2:arm64. 644s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 644s Unpacking libcairo2:arm64 (1.18.0-1) ... 645s Selecting previously unselected package libcurl4-openssl-dev:arm64. 645s Preparing to unpack .../065-libcurl4-openssl-dev_8.5.0-2ubuntu7_arm64.deb ... 645s Unpacking libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 645s Selecting previously unselected package libdatrie1:arm64. 645s Preparing to unpack .../066-libdatrie1_0.2.13-3_arm64.deb ... 645s Unpacking libdatrie1:arm64 (0.2.13-3) ... 645s Selecting previously unselected package libdeflate0:arm64. 646s Preparing to unpack .../067-libdeflate0_1.19-1_arm64.deb ... 646s Unpacking libdeflate0:arm64 (1.19-1) ... 646s Selecting previously unselected package libgraphite2-3:arm64. 646s Preparing to unpack .../068-libgraphite2-3_1.3.14-2_arm64.deb ... 646s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 646s Selecting previously unselected package libharfbuzz0b:arm64. 646s Preparing to unpack .../069-libharfbuzz0b_8.3.0-2_arm64.deb ... 646s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 646s Selecting previously unselected package libsz2:arm64. 647s Preparing to unpack .../070-libsz2_1.1.2-1_arm64.deb ... 647s Unpacking libsz2:arm64 (1.1.2-1) ... 647s Selecting previously unselected package libhdf5-103-1:arm64. 647s Preparing to unpack .../071-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 647s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 648s Selecting previously unselected package libhdf5-cpp-103-1:arm64. 648s Preparing to unpack .../072-libhdf5-cpp-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 648s Unpacking libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 648s Selecting previously unselected package libhdf5-fortran-102:arm64. 648s Preparing to unpack .../073-libhdf5-fortran-102_1.10.10+repack-3ubuntu1_arm64.deb ... 648s Unpacking libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 648s Selecting previously unselected package libhdf5-hl-100:arm64. 648s Preparing to unpack .../074-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 648s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 649s Selecting previously unselected package libhdf5-hl-fortran-100:arm64. 649s Preparing to unpack .../075-libhdf5-hl-fortran-100_1.10.10+repack-3ubuntu1_arm64.deb ... 649s Unpacking libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 649s Selecting previously unselected package libhdf5-hl-cpp-100:arm64. 649s Preparing to unpack .../076-libhdf5-hl-cpp-100_1.10.10+repack-3ubuntu1_arm64.deb ... 649s Unpacking libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 650s Selecting previously unselected package zlib1g-dev:arm64. 650s Preparing to unpack .../077-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 650s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 650s Selecting previously unselected package libjpeg-turbo8:arm64. 650s Preparing to unpack .../078-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 650s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 651s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 651s Preparing to unpack .../079-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 651s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 651s Selecting previously unselected package libjpeg8:arm64. 651s Preparing to unpack .../080-libjpeg8_8c-2ubuntu11_arm64.deb ... 651s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 651s Selecting previously unselected package libjpeg8-dev:arm64. 652s Preparing to unpack .../081-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 652s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 652s Selecting previously unselected package libjpeg-dev:arm64. 652s Preparing to unpack .../082-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 652s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 652s Selecting previously unselected package libaec-dev:arm64. 652s Preparing to unpack .../083-libaec-dev_1.1.2-1_arm64.deb ... 652s Unpacking libaec-dev:arm64 (1.1.2-1) ... 653s Selecting previously unselected package libssl-dev:arm64. 653s Preparing to unpack .../084-libssl-dev_3.0.13-0ubuntu1_arm64.deb ... 653s Unpacking libssl-dev:arm64 (3.0.13-0ubuntu1) ... 654s Selecting previously unselected package libhdf5-dev. 654s Preparing to unpack .../085-libhdf5-dev_1.10.10+repack-3ubuntu1_arm64.deb ... 654s Unpacking libhdf5-dev (1.10.10+repack-3ubuntu1) ... 654s Selecting previously unselected package x11-common. 655s Preparing to unpack .../086-x11-common_1%3a7.7+23ubuntu2_all.deb ... 655s Unpacking x11-common (1:7.7+23ubuntu2) ... 655s Selecting previously unselected package libice6:arm64. 655s Preparing to unpack .../087-libice6_2%3a1.0.10-1build2_arm64.deb ... 655s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 655s Selecting previously unselected package libicu-dev:arm64. 655s Preparing to unpack .../088-libicu-dev_74.2-1ubuntu1_arm64.deb ... 655s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 661s Selecting previously unselected package libjs-bootstrap. 661s Preparing to unpack .../089-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 661s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 662s Selecting previously unselected package libjs-popper.js. 662s Preparing to unpack .../090-libjs-popper.js_1.16.1+ds-6_all.deb ... 662s Unpacking libjs-popper.js (1.16.1+ds-6) ... 662s Selecting previously unselected package libjs-bootstrap4. 662s Preparing to unpack .../091-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 663s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 664s Selecting previously unselected package libjs-d3. 665s Preparing to unpack .../092-libjs-d3_3.5.17-4_all.deb ... 665s Unpacking libjs-d3 (3.5.17-4) ... 665s Selecting previously unselected package libjs-es5-shim. 665s Preparing to unpack .../093-libjs-es5-shim_4.6.7-2_all.deb ... 665s Unpacking libjs-es5-shim (4.6.7-2) ... 666s Selecting previously unselected package libjs-highlight.js. 666s Preparing to unpack .../094-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 666s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 666s Selecting previously unselected package libjs-jquery. 666s Preparing to unpack .../095-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 666s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 666s Selecting previously unselected package libjs-jquery-datatables. 666s Preparing to unpack .../096-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 666s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 667s Selecting previously unselected package libjs-jquery-datatables-extensions. 667s Preparing to unpack .../097-libjs-jquery-datatables-extensions_0.0+git20150910.28fd64e+dfsg-5_all.deb ... 667s Unpacking libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 667s Selecting previously unselected package libjs-sifter.js. 667s Preparing to unpack .../098-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 667s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 667s Selecting previously unselected package libjs-microplugin.js. 667s Preparing to unpack .../099-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 668s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 668s Selecting previously unselected package libjs-jquery-selectize.js. 668s Preparing to unpack .../100-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 668s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 668s Selecting previously unselected package libjs-jquery-ui. 668s Preparing to unpack .../101-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 668s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 669s Selecting previously unselected package libjs-json. 669s Preparing to unpack .../102-libjs-json_0~20221030+~1.0.8-1_all.deb ... 669s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 669s Selecting previously unselected package libjs-prettify. 669s Preparing to unpack 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Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 672s Selecting previously unselected package libthai-data. 672s Preparing to unpack .../109-libthai-data_0.1.29-2_all.deb ... 672s Unpacking libthai-data (0.1.29-2) ... 672s Selecting previously unselected package libthai0:arm64. 673s Preparing to unpack .../110-libthai0_0.1.29-2_arm64.deb ... 673s Unpacking libthai0:arm64 (0.1.29-2) ... 673s Selecting previously unselected package libpango-1.0-0:arm64. 673s Preparing to unpack .../111-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 673s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 673s Selecting previously unselected package libpangoft2-1.0-0:arm64. 673s Preparing to unpack .../112-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 673s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 673s Selecting previously unselected package libpangocairo-1.0-0:arm64. 673s Preparing to unpack .../113-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 673s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 673s Selecting previously unselected package libpaper1:arm64. 673s Preparing to unpack .../114-libpaper1_1.1.29_arm64.deb ... 673s Unpacking libpaper1:arm64 (1.1.29) ... 674s Selecting previously unselected package libpaper-utils. 674s Preparing to unpack .../115-libpaper-utils_1.1.29_arm64.deb ... 674s Unpacking libpaper-utils (1.1.29) ... 674s Selecting previously unselected package libpcre2-16-0:arm64. 674s Preparing to unpack .../116-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 674s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 674s Selecting previously unselected package libpcre2-32-0:arm64. 674s Preparing to unpack .../117-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 674s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 675s Selecting previously unselected package libpcre2-posix3:arm64. 675s Preparing to unpack .../118-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 675s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 675s Selecting previously unselected package libpcre2-dev:arm64. 675s Preparing to unpack .../119-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 675s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 676s Selecting previously unselected package libpkgconf3:arm64. 676s Preparing to unpack .../120-libpkgconf3_1.8.1-2_arm64.deb ... 676s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 676s Selecting previously unselected package libpng-dev:arm64. 676s Preparing to unpack .../121-libpng-dev_1.6.43-3_arm64.deb ... 676s Unpacking libpng-dev:arm64 (1.6.43-3) ... 676s Selecting previously unselected package libreadline-dev:arm64. 676s Preparing to unpack .../122-libreadline-dev_8.2-3.1_arm64.deb ... 676s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 676s Selecting previously unselected package libsharpyuv0:arm64. 676s Preparing to unpack .../123-libsharpyuv0_1.3.2-0.4_arm64.deb ... 676s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 677s Selecting previously unselected package libsm6:arm64. 677s Preparing to unpack .../124-libsm6_2%3a1.2.3-1build2_arm64.deb ... 677s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 677s Selecting previously unselected package libtcl8.6:arm64. 677s Preparing to unpack .../125-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 677s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 677s Selecting previously unselected package libjbig0:arm64. 677s Preparing to unpack .../126-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 677s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 677s Selecting previously unselected package libwebp7:arm64. 677s Preparing to unpack .../127-libwebp7_1.3.2-0.4_arm64.deb ... 677s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 678s Selecting previously unselected package libtiff6:arm64. 678s Preparing to unpack .../128-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 678s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 678s Selecting previously unselected package libxft2:arm64. 678s Preparing to unpack .../129-libxft2_2.3.6-1_arm64.deb ... 678s Unpacking libxft2:arm64 (2.3.6-1) ... 678s Selecting previously unselected package libxss1:arm64. 678s Preparing to unpack .../130-libxss1_1%3a1.2.3-1build2_arm64.deb ... 678s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 678s Selecting previously unselected package libtk8.6:arm64. 678s Preparing to unpack .../131-libtk8.6_8.6.13-2_arm64.deb ... 678s Unpacking libtk8.6:arm64 (8.6.13-2) ... 678s Selecting previously unselected package libxt6t64:arm64. 679s Preparing to unpack .../132-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 679s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 679s Selecting previously unselected package node-bootstrap-sass. 679s Preparing to unpack .../133-node-bootstrap-sass_3.4.3-2_all.deb ... 679s Unpacking node-bootstrap-sass (3.4.3-2) ... 679s Selecting previously unselected package node-html5shiv. 679s Preparing to unpack .../134-node-html5shiv_3.7.3+dfsg-5_all.deb ... 679s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 679s Selecting previously unselected package node-normalize.css. 679s Preparing to unpack .../135-node-normalize.css_8.0.1-5_all.deb ... 679s Unpacking node-normalize.css (8.0.1-5) ... 679s Selecting previously unselected package pandoc-data. 679s Preparing to unpack .../136-pandoc-data_3.1.3-1_all.deb ... 679s Unpacking pandoc-data (3.1.3-1) ... 680s Selecting previously unselected package pandoc. 680s Preparing to unpack .../137-pandoc_3.1.3+ds-2_arm64.deb ... 680s Unpacking pandoc (3.1.3+ds-2) ... 689s Selecting previously unselected package pkgconf-bin. 689s Preparing to unpack .../138-pkgconf-bin_1.8.1-2_arm64.deb ... 689s Unpacking pkgconf-bin (1.8.1-2) ... 689s Selecting previously unselected package pkgconf:arm64. 689s Preparing to unpack .../139-pkgconf_1.8.1-2_arm64.deb ... 689s Unpacking pkgconf:arm64 (1.8.1-2) ... 689s Selecting previously unselected package pkg-config:arm64. 689s Preparing to unpack .../140-pkg-config_1.8.1-2_arm64.deb ... 689s Unpacking pkg-config:arm64 (1.8.1-2) ... 689s Selecting previously unselected package zip. 689s Preparing to unpack .../141-zip_3.0-13_arm64.deb ... 689s Unpacking zip (3.0-13) ... 689s Selecting previously unselected package unzip. 689s Preparing to unpack .../142-unzip_6.0-28ubuntu3_arm64.deb ... 689s Unpacking unzip (6.0-28ubuntu3) ... 690s Selecting previously unselected package xdg-utils. 690s Preparing to unpack .../143-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 690s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 690s Selecting previously unselected package r-base-core. 690s Preparing to unpack .../144-r-base-core_4.3.3-2build1_arm64.deb ... 690s Unpacking r-base-core (4.3.3-2build1) ... 693s Selecting previously unselected package liblzma-dev:arm64. 693s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_arm64.deb ... 693s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 693s Selecting previously unselected package r-base-dev. 693s Preparing to unpack .../146-r-base-dev_4.3.3-2build1_all.deb ... 693s Unpacking r-base-dev (4.3.3-2build1) ... 693s Selecting previously unselected package pkg-r-autopkgtest. 693s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 693s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 693s Selecting previously unselected package r-bioc-biocgenerics. 693s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 693s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 694s Selecting previously unselected package r-bioc-biobase. 694s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_arm64.deb ... 694s Unpacking r-bioc-biobase (2.62.0-1) ... 694s Selecting previously unselected package r-bioc-s4vectors. 694s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 694s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 694s Selecting previously unselected package r-bioc-iranges. 694s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_arm64.deb ... 694s Unpacking r-bioc-iranges (2.36.0-1) ... 695s Selecting previously unselected package r-cran-dbi. 695s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 695s Unpacking r-cran-dbi (1.2.2-1) ... 695s Selecting previously unselected package r-cran-bit. 695s Preparing to unpack .../153-r-cran-bit_4.0.5-1_arm64.deb ... 695s Unpacking r-cran-bit (4.0.5-1) ... 695s Selecting previously unselected package r-cran-bit64. 695s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_arm64.deb ... 695s Unpacking r-cran-bit64 (4.0.5-1) ... 696s Selecting previously unselected package r-cran-rlang. 696s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_arm64.deb ... 696s Unpacking r-cran-rlang (1.1.3-1) ... 696s Selecting previously unselected package r-cran-cli. 696s Preparing to unpack .../156-r-cran-cli_3.6.2-1_arm64.deb ... 696s Unpacking r-cran-cli (3.6.2-1) ... 697s Selecting previously unselected package r-cran-glue. 697s Preparing to unpack .../157-r-cran-glue_1.7.0-1_arm64.deb ... 697s Unpacking r-cran-glue (1.7.0-1) ... 698s Selecting previously unselected package r-cran-lifecycle. 698s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 698s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 698s Selecting previously unselected package r-cran-vctrs. 698s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_arm64.deb ... 698s Unpacking r-cran-vctrs (0.6.5-1) ... 699s Selecting previously unselected package r-cran-blob. 699s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 699s Unpacking r-cran-blob (1.2.4-1) ... 699s Selecting previously unselected package r-cran-fastmap. 699s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_arm64.deb ... 699s Unpacking r-cran-fastmap (1.1.1-1) ... 699s Selecting previously unselected package r-cran-cachem. 699s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_arm64.deb ... 699s Unpacking r-cran-cachem (1.0.8-1) ... 699s Selecting previously unselected package r-cran-memoise. 699s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 699s Unpacking r-cran-memoise (2.0.1-1) ... 700s Selecting previously unselected package r-cran-pkgconfig. 700s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 700s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 700s Selecting previously unselected package r-cran-plogr. 700s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 700s Unpacking r-cran-plogr (0.2.0-3build1) ... 700s Selecting previously unselected package r-cran-cpp11. 700s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 700s Unpacking r-cran-cpp11 (0.4.7-1) ... 701s Selecting previously unselected package r-cran-rsqlite. 701s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_arm64.deb ... 701s Unpacking r-cran-rsqlite (2.3.4-1) ... 702s Selecting previously unselected package r-cran-curl. 703s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 703s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 703s Selecting previously unselected package r-cran-jsonlite. 703s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 703s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 704s Selecting previously unselected package r-cran-mime. 704s Preparing to unpack .../170-r-cran-mime_0.12-1_arm64.deb ... 704s Unpacking r-cran-mime (0.12-1) ... 704s Selecting previously unselected package r-cran-sys. 704s Preparing to unpack .../171-r-cran-sys_3.4.2-1_arm64.deb ... 704s Unpacking r-cran-sys (3.4.2-1) ... 705s Selecting previously unselected package r-cran-askpass. 705s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_arm64.deb ... 705s Unpacking r-cran-askpass (1.2.0-1) ... 705s Selecting previously unselected package r-cran-openssl. 705s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 705s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 705s Selecting previously unselected package r-cran-r6. 705s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 705s Unpacking r-cran-r6 (2.5.1-1) ... 705s Selecting previously unselected package r-cran-httr. 705s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 705s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 705s Selecting previously unselected package r-cran-png. 706s Preparing to unpack .../176-r-cran-png_0.1-8-1_arm64.deb ... 706s Unpacking r-cran-png (0.1-8-1) ... 706s Selecting previously unselected package r-bioc-zlibbioc. 706s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 706s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 706s Selecting previously unselected package r-bioc-xvector. 706s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_arm64.deb ... 706s Unpacking r-bioc-xvector (0.42.0-1) ... 706s Selecting previously unselected package r-cran-bitops. 707s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_arm64.deb ... 707s Unpacking r-cran-bitops (1.0-7-1) ... 707s Selecting previously unselected package r-cran-rcurl. 707s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 707s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 707s Selecting previously unselected package r-bioc-genomeinfodbdata. 707s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 707s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 708s Selecting previously unselected package r-bioc-genomeinfodb. 708s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 708s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 708s Selecting previously unselected package r-cran-crayon. 708s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 708s Unpacking r-cran-crayon (1.5.2-1) ... 709s Selecting previously unselected package r-bioc-biostrings. 709s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 709s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 709s Selecting previously unselected package r-bioc-keggrest. 709s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 709s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 710s Selecting previously unselected package r-bioc-annotationdbi. 710s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 710s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 711s Selecting previously unselected package r-cran-xml. 711s Preparing to unpack .../187-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 711s Unpacking r-cran-xml (3.99-0.16.1-1) ... 712s Selecting previously unselected package r-cran-xtable. 712s Preparing to unpack .../188-r-cran-xtable_1%3a1.8-4-2_all.deb ... 712s Unpacking r-cran-xtable (1:1.8-4-2) ... 712s Selecting previously unselected package r-bioc-annotate. 712s Preparing to unpack .../189-r-bioc-annotate_1.80.0+dfsg-1_all.deb ... 712s Unpacking r-bioc-annotate (1.80.0+dfsg-1) ... 712s Selecting previously unselected package r-cran-generics. 713s Preparing to unpack .../190-r-cran-generics_0.1.3-1_all.deb ... 713s Unpacking r-cran-generics (0.1.3-1) ... 713s Selecting previously unselected package r-cran-magrittr. 713s Preparing to unpack .../191-r-cran-magrittr_2.0.3-1_arm64.deb ... 713s Unpacking r-cran-magrittr (2.0.3-1) ... 713s Selecting previously unselected package r-cran-fansi. 713s Preparing to unpack .../192-r-cran-fansi_1.0.5-1_arm64.deb ... 713s Unpacking r-cran-fansi (1.0.5-1) ... 713s Selecting previously unselected package r-cran-utf8. 713s Preparing to unpack .../193-r-cran-utf8_1.2.4-1_arm64.deb ... 713s Unpacking r-cran-utf8 (1.2.4-1) ... 713s Selecting previously unselected package r-cran-pillar. 713s Preparing to unpack .../194-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 713s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 714s Selecting previously unselected package r-cran-tibble. 714s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 714s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 714s Selecting previously unselected package r-cran-withr. 714s Preparing to unpack .../196-r-cran-withr_2.5.0-1_all.deb ... 714s Unpacking r-cran-withr (2.5.0-1) ... 714s Selecting previously unselected package r-cran-tidyselect. 714s Preparing to unpack .../197-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 714s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 715s Selecting previously unselected package r-cran-dplyr. 715s Preparing to unpack .../198-r-cran-dplyr_1.1.4-1_arm64.deb ... 715s Unpacking r-cran-dplyr (1.1.4-1) ... 715s Selecting previously unselected package r-cran-purrr. 715s Preparing to unpack .../199-r-cran-purrr_1.0.2-1_arm64.deb ... 715s Unpacking r-cran-purrr (1.0.2-1) ... 715s Selecting previously unselected package r-cran-stringi. 715s Preparing to unpack .../200-r-cran-stringi_1.8.3-1_arm64.deb ... 715s Unpacking r-cran-stringi (1.8.3-1) ... 715s Selecting previously unselected package r-cran-stringr. 716s Preparing to unpack .../201-r-cran-stringr_1.5.1-1_all.deb ... 716s Unpacking r-cran-stringr (1.5.1-1) ... 716s Selecting previously unselected package r-cran-tidyr. 716s Preparing to unpack .../202-r-cran-tidyr_1.3.1-1_arm64.deb ... 716s Unpacking r-cran-tidyr (1.3.1-1) ... 716s Selecting previously unselected package r-cran-dbplyr. 716s Preparing to unpack .../203-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 716s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 716s Selecting previously unselected package r-cran-filelock. 716s Preparing to unpack .../204-r-cran-filelock_1.0.3-1_arm64.deb ... 716s Unpacking r-cran-filelock (1.0.3-1) ... 717s Selecting previously unselected package r-bioc-biocfilecache. 717s Preparing to unpack .../205-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 717s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 717s Selecting previously unselected package r-cran-biocmanager. 717s Preparing to unpack .../206-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 717s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 717s Selecting previously unselected package r-bioc-biocversion. 717s Preparing to unpack .../207-r-bioc-biocversion_3.18.1-1_all.deb ... 717s Unpacking r-bioc-biocversion (3.18.1-1) ... 717s Selecting previously unselected package r-cran-rappdirs. 717s Preparing to unpack .../208-r-cran-rappdirs_0.3.3-1_arm64.deb ... 717s Unpacking r-cran-rappdirs (0.3.3-1) ... 717s Selecting previously unselected package r-cran-yaml. 717s Preparing to unpack .../209-r-cran-yaml_2.3.8-1_arm64.deb ... 717s Unpacking r-cran-yaml (2.3.8-1) ... 717s Selecting previously unselected package r-cran-littler. 718s Preparing to unpack .../210-r-cran-littler_0.3.19-1_arm64.deb ... 718s Unpacking r-cran-littler (0.3.19-1) ... 718s Selecting previously unselected package r-cran-pkgkitten. 718s Preparing to unpack .../211-r-cran-pkgkitten_0.2.3-1_all.deb ... 718s Unpacking r-cran-pkgkitten (0.2.3-1) ... 718s Selecting previously unselected package r-cran-rcpp. 718s Preparing to unpack .../212-r-cran-rcpp_1.0.12-1_arm64.deb ... 718s Unpacking r-cran-rcpp (1.0.12-1) ... 720s Selecting previously unselected package r-cran-later. 720s Preparing to unpack .../213-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 720s Unpacking r-cran-later (1.3.2+dfsg-1) ... 720s Selecting previously unselected package r-cran-promises. 721s Preparing to unpack .../214-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 721s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 721s Selecting previously unselected package r-cran-httpuv. 721s Preparing to unpack .../215-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 721s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 721s Selecting previously unselected package r-cran-base64enc. 721s Preparing to unpack .../216-r-cran-base64enc_0.1-3-3_arm64.deb ... 721s Unpacking r-cran-base64enc (0.1-3-3) ... 721s Selecting previously unselected package r-cran-digest. 721s Preparing to unpack .../217-r-cran-digest_0.6.34-1_arm64.deb ... 721s Unpacking r-cran-digest (0.6.34-1) ... 721s Selecting previously unselected package r-cran-ellipsis. 721s Preparing to unpack .../218-r-cran-ellipsis_0.3.2-2_arm64.deb ... 721s Unpacking r-cran-ellipsis (0.3.2-2) ... 722s Selecting previously unselected package r-cran-htmltools. 722s Preparing to unpack .../219-r-cran-htmltools_0.5.7-1_arm64.deb ... 722s Unpacking r-cran-htmltools (0.5.7-1) ... 722s Selecting previously unselected package r-cran-fontawesome. 722s Preparing to unpack .../220-r-cran-fontawesome_0.5.2-1_all.deb ... 722s Unpacking r-cran-fontawesome (0.5.2-1) ... 722s Selecting previously unselected package r-cran-sourcetools. 722s Preparing to unpack .../221-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 722s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 723s Selecting previously unselected package r-cran-commonmark. 723s Preparing to unpack .../222-r-cran-commonmark_1.9.1-1_arm64.deb ... 723s Unpacking r-cran-commonmark (1.9.1-1) ... 723s Selecting previously unselected package r-cran-jquerylib. 723s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 723s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 723s Selecting previously unselected package r-cran-fs. 723s Preparing to unpack .../224-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 723s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 723s Selecting previously unselected package r-cran-sass. 724s Preparing to unpack .../225-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 724s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 724s Selecting previously unselected package r-cran-bslib. 724s Preparing to unpack .../226-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 724s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 725s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 725s Preparing to unpack .../227-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 725s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 725s Selecting previously unselected package r-cran-shiny. 725s Preparing to unpack .../228-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 725s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 727s Selecting previously unselected package r-cran-evaluate. 727s Preparing to unpack .../229-r-cran-evaluate_0.23-1_all.deb ... 727s Unpacking r-cran-evaluate (0.23-1) ... 728s Selecting previously unselected package r-cran-xfun. 728s Preparing to unpack .../230-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 728s Unpacking r-cran-xfun (0.41+dfsg-1) ... 728s Selecting previously unselected package r-cran-highr. 728s Preparing to unpack .../231-r-cran-highr_0.10+dfsg-1_all.deb ... 728s Unpacking r-cran-highr (0.10+dfsg-1) ... 729s Selecting previously unselected package libjs-mathjax. 729s Preparing to unpack .../232-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 729s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 734s Selecting previously unselected package r-cran-knitr. 734s Preparing to unpack .../233-r-cran-knitr_1.45+dfsg-1_all.deb ... 734s Unpacking r-cran-knitr (1.45+dfsg-1) ... 735s Selecting previously unselected package r-cran-tinytex. 735s Preparing to unpack .../234-r-cran-tinytex_0.49-1_all.deb ... 735s Unpacking r-cran-tinytex (0.49-1) ... 735s Selecting previously unselected package libjs-modernizr. 735s Preparing to unpack .../235-libjs-modernizr_2.6.2+ds1-5_all.deb ... 735s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 736s Selecting previously unselected package r-cran-rmarkdown. 736s Preparing to unpack .../236-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 736s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 736s Selecting previously unselected package r-cran-htmlwidgets. 736s Preparing to unpack .../237-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 736s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 736s Selecting previously unselected package r-cran-lazyeval. 737s Preparing to unpack .../238-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 737s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 737s Selecting previously unselected package r-cran-crosstalk. 737s Preparing to unpack .../239-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 737s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 737s Selecting previously unselected package r-cran-dt. 737s Preparing to unpack .../240-r-cran-dt_0.31+dfsg-1_all.deb ... 737s Unpacking r-cran-dt (0.31+dfsg-1) ... 737s Selecting previously unselected package r-bioc-interactivedisplaybase. 737s Preparing to unpack .../241-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 737s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 738s Selecting previously unselected package r-bioc-annotationhub. 738s Preparing to unpack .../242-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 738s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 738s Selecting previously unselected package r-bioc-biocio. 738s Preparing to unpack .../243-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 738s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 738s Selecting previously unselected package r-cran-formatr. 738s Preparing to unpack .../244-r-cran-formatr_1.14-1_all.deb ... 738s Unpacking r-cran-formatr (1.14-1) ... 738s Selecting previously unselected package r-cran-lambda.r. 738s Preparing to unpack .../245-r-cran-lambda.r_1.2.4-2build1_all.deb ... 738s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 739s Selecting previously unselected package r-cran-futile.options. 739s Preparing to unpack .../246-r-cran-futile.options_1.0.1-3build1_all.deb ... 739s Unpacking r-cran-futile.options (1.0.1-3build1) ... 739s Selecting previously unselected package r-cran-futile.logger. 739s Preparing to unpack .../247-r-cran-futile.logger_1.4.3-4build1_all.deb ... 739s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 740s Selecting previously unselected package r-cran-snow. 740s Preparing to unpack .../248-r-cran-snow_1%3a0.4.4-2_all.deb ... 740s Unpacking r-cran-snow (1:0.4.4-2) ... 740s Selecting previously unselected package r-cran-codetools. 740s Preparing to unpack .../249-r-cran-codetools_0.2-19-1_all.deb ... 740s Unpacking r-cran-codetools (0.2-19-1) ... 741s Selecting previously unselected package r-cran-bh. 741s Preparing to unpack .../250-r-cran-bh_1.84.0-1_all.deb ... 741s Unpacking r-cran-bh (1.84.0-1) ... 741s Selecting previously unselected package r-bioc-biocparallel. 741s Preparing to unpack .../251-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 741s Unpacking r-bioc-biocparallel (1.36.0-1) ... 741s Selecting previously unselected package r-cran-hms. 741s Preparing to unpack .../252-r-cran-hms_1.1.3-1_all.deb ... 741s Unpacking r-cran-hms (1.1.3-1) ... 741s Selecting previously unselected package r-cran-prettyunits. 741s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 741s Unpacking r-cran-prettyunits (1.2.0-1) ... 742s Selecting previously unselected package r-cran-progress. 742s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 742s Unpacking r-cran-progress (1.2.3-1) ... 742s Selecting previously unselected package r-cran-xml2. 742s Preparing to unpack .../255-r-cran-xml2_1.3.6-1_arm64.deb ... 742s Unpacking r-cran-xml2 (1.3.6-1) ... 742s Selecting previously unselected package r-bioc-biomart. 742s Preparing to unpack .../256-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 742s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 742s Selecting previously unselected package r-cran-lattice. 742s Preparing to unpack .../257-r-cran-lattice_0.22-5-1_arm64.deb ... 742s Unpacking r-cran-lattice (0.22-5-1) ... 743s Selecting previously unselected package r-cran-matrix. 743s Preparing to unpack .../258-r-cran-matrix_1.6-5-1_arm64.deb ... 743s Unpacking r-cran-matrix (1.6-5-1) ... 743s Selecting previously unselected package r-cran-matrixstats. 743s Preparing to unpack .../259-r-cran-matrixstats_1.2.0-1_arm64.deb ... 743s Unpacking r-cran-matrixstats (1.2.0-1) ... 743s Selecting previously unselected package r-bioc-matrixgenerics. 743s Preparing to unpack .../260-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 743s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 744s Selecting previously unselected package r-cran-abind. 744s Preparing to unpack .../261-r-cran-abind_1.4-5-2_all.deb ... 744s Unpacking r-cran-abind (1.4-5-2) ... 744s Selecting previously unselected package r-bioc-s4arrays. 744s Preparing to unpack .../262-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 744s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 744s Selecting previously unselected package r-bioc-sparsearray. 744s Preparing to unpack .../263-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 744s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 745s Selecting previously unselected package r-bioc-delayedarray. 745s Preparing to unpack .../264-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 745s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 745s Selecting previously unselected package r-bioc-sparsematrixstats. 745s Preparing to unpack .../265-r-bioc-sparsematrixstats_1.14.0+dfsg-1_arm64.deb ... 745s Unpacking r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 745s Selecting previously unselected package r-bioc-delayedmatrixstats. 745s Preparing to unpack .../266-r-bioc-delayedmatrixstats_1.24.0+ds-1_all.deb ... 745s Unpacking r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 746s Selecting previously unselected package r-bioc-experimenthub. 746s Preparing to unpack .../267-r-bioc-experimenthub_2.10.0+ds-1_all.deb ... 746s Unpacking r-bioc-experimenthub (2.10.0+ds-1) ... 746s Selecting previously unselected package r-cran-survival. 746s Preparing to unpack .../268-r-cran-survival_3.5-8-1_arm64.deb ... 746s Unpacking r-cran-survival (3.5-8-1) ... 746s Selecting previously unselected package r-bioc-genefilter. 746s Preparing to unpack .../269-r-bioc-genefilter_1.84.0-1_arm64.deb ... 746s Unpacking r-bioc-genefilter (1.84.0-1) ... 746s Selecting previously unselected package r-bioc-genomicranges. 746s Preparing to unpack .../270-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 747s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 747s Selecting previously unselected package r-bioc-summarizedexperiment. 747s Preparing to unpack .../271-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 747s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 747s Selecting previously unselected package r-bioc-rhtslib. 747s Preparing to unpack .../272-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 747s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 748s Selecting previously unselected package r-bioc-rsamtools. 748s Preparing to unpack .../273-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 748s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 749s Selecting previously unselected package r-bioc-genomicalignments. 749s Preparing to unpack .../274-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 749s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 749s Selecting previously unselected package r-cran-rjson. 749s Preparing to unpack .../275-r-cran-rjson_0.2.21-1_arm64.deb ... 749s Unpacking r-cran-rjson (0.2.21-1) ... 749s Selecting previously unselected package r-cran-restfulr. 749s Preparing to unpack .../276-r-cran-restfulr_0.0.15-1_arm64.deb ... 749s Unpacking r-cran-restfulr (0.0.15-1) ... 749s Selecting previously unselected package r-bioc-rtracklayer. 749s Preparing to unpack .../277-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 749s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 750s Selecting previously unselected package r-bioc-genomicfeatures. 751s Preparing to unpack .../278-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 751s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 751s Selecting previously unselected package r-bioc-rhdf5lib. 751s Preparing to unpack .../279-r-bioc-rhdf5lib_1.24.2+dfsg-1_arm64.deb ... 751s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 751s Selecting previously unselected package r-bioc-rhdf5filters. 751s Preparing to unpack .../280-r-bioc-rhdf5filters_1.14.1+dfsg-3_arm64.deb ... 751s Unpacking r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 752s Selecting previously unselected package r-bioc-rhdf5. 752s Preparing to unpack .../281-r-bioc-rhdf5_2.46.1+dfsg-1_arm64.deb ... 752s Unpacking r-bioc-rhdf5 (2.46.1+dfsg-1) ... 752s Selecting previously unselected package r-bioc-hdf5array. 752s Preparing to unpack .../282-r-bioc-hdf5array_1.30.1-1_arm64.deb ... 752s Unpacking r-bioc-hdf5array (1.30.1-1) ... 752s Selecting previously unselected package r-bioc-singlecellexperiment. 752s Preparing to unpack .../283-r-bioc-singlecellexperiment_1.24.0+ds-1_all.deb ... 752s Unpacking r-bioc-singlecellexperiment (1.24.0+ds-1) ... 753s Selecting previously unselected package r-cran-runit. 753s Preparing to unpack .../284-r-cran-runit_0.4.32-3_all.deb ... 753s Unpacking r-cran-runit (0.4.32-3) ... 753s Selecting previously unselected package autopkgtest-satdep. 753s Preparing to unpack .../285-1-autopkgtest-satdep.deb ... 753s Unpacking autopkgtest-satdep (0) ... 753s Setting up libjs-json (0~20221030+~1.0.8-1) ... 753s Setting up javascript-common (11+nmu1) ... 753s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 753s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 753s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 753s Setting up libpaper1:arm64 (1.1.29) ... 754s 754s Creating config file /etc/papersize with new version 755s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 755s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 755s Setting up hdf5-helpers (1.10.10+repack-3ubuntu1) ... 755s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 755s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 755s Setting up libdatrie1:arm64 (0.2.13-3) ... 755s Setting up libjs-popper.js (1.16.1+ds-6) ... 755s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 755s Setting up libxcb-render0:arm64 (1.15-1) ... 755s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 755s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 755s Setting up unzip (6.0-28ubuntu3) ... 755s Setting up x11-common (1:7.7+23ubuntu2) ... 759s Setting up node-html5shiv (3.7.3+dfsg-5) ... 759s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 759s Setting up libdeflate0:arm64 (1.19-1) ... 759s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 759s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 759s Setting up libxcb-shm0:arm64 (1.15-1) ... 759s Setting up libpaper-utils (1.1.29) ... 759s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 759s Setting up libjs-modernizr (2.6.2+ds1-5) ... 759s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 759s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 759s Setting up libaec0:arm64 (1.1.2-1) ... 759s Setting up libsnappy1v5:arm64 (1.1.10-1) ... 759s Setting up libjs-es5-shim (4.6.7-2) ... 759s Setting up zip (3.0-13) ... 759s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 759s Setting up libblas3:arm64 (3.12.0-3) ... 759s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 759s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 759s Setting up libpkgconf3:arm64 (1.8.1-2) ... 759s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 759s Setting up libjs-d3 (3.5.17-4) ... 759s Setting up fonts-dejavu-mono (2.37-8) ... 759s Setting up libssl-dev:arm64 (3.0.13-0ubuntu1) ... 759s Setting up libpng16-16t64:arm64 (1.6.43-3) ... 759s Setting up libmpc3:arm64 (1.3.1-1) ... 759s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 759s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 759s Setting up icu-devtools (74.2-1ubuntu1) ... 759s Setting up fonts-dejavu-core (2.37-8) ... 760s Setting up pkgconf-bin (1.8.1-2) ... 760s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 760s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libwebp7:arm64 (1.3.2-0.4) ... 760s Setting up libreadline8t64:arm64 (8.2-3.1) ... 760s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 760s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 760s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 760s Setting up libnsl-dev:arm64 (1.3.0-3) ... 760s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 760s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libblosc1:arm64 (1.21.5+ds-1) ... 760s Setting up liblua5.4-0:arm64 (5.4.6-3) ... 760s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 760s Setting up libthai-data (0.1.29-2) ... 760s Setting up node-bootstrap-sass (3.4.3-2) ... 760s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 760s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 760s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 760s Setting up pandoc-data (3.1.3-1) ... 760s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 760s Setting up libisl23:arm64 (0.26-3) ... 760s Setting up libc-dev-bin (2.39-0ubuntu2) ... 760s Setting up node-normalize.css (8.0.1-5) ... 760s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 760s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 760s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 760s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 760s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libblas-dev:arm64 (3.12.0-3) ... 760s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 760s Setting up libsz2:arm64 (1.1.2-1) ... 760s Setting up dctrl-tools (2.24-3build2) ... 760s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 760s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 760s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 760s Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 760s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 760s Setting up libice6:arm64 (2:1.0.10-1build2) ... 761s Setting up liblapack3:arm64 (3.12.0-3) ... 761s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 761s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 761s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 761s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 762s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 762s Setting up libaec-dev:arm64 (1.1.2-1) ... 762s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 762s Setting up pkgconf:arm64 (1.8.1-2) ... 762s Setting up libthai0:arm64 (0.1.29-2) ... 762s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 762s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 762s Setting up pandoc (3.1.3+ds-2) ... 762s Setting up libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 762s Setting up liblapack-dev:arm64 (3.12.0-3) ... 762s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 762s Setting up pkg-config:arm64 (1.8.1-2) ... 762s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 762s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 762s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 762s Setting up libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 762s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 762s Setting up curl (8.5.0-2ubuntu7) ... 762s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 762s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 762s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 762s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 762s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 762s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 762s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 762s Setting up fontconfig (2.15.0-1ubuntu1) ... 765s Regenerating fonts cache... done. 765s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 765s Setting up libxft2:arm64 (2.3.6-1) ... 765s Setting up libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 765s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 765s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 765s Setting up cpp-13 (13.2.0-17ubuntu2) ... 765s Setting up libtk8.6:arm64 (8.6.13-2) ... 765s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 765s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 765s Setting up libreadline-dev:arm64 (8.2-3.1) ... 765s Setting up libcairo2:arm64 (1.18.0-1) ... 765s Setting up libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 765s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... 765s Setting up gcc-13 (13.2.0-17ubuntu2) ... 765s Setting up libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 765s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 765s Setting up cpp (4:13.2.0-7ubuntu1) ... 766s Setting up libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 766s Setting up libboost-dev:arm64 (1.83.0.1ubuntu2) ... 766s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 766s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 766s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 766s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 766s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 766s Setting up g++-13 (13.2.0-17ubuntu2) ... 766s Setting up libpng-dev:arm64 (1.6.43-3) ... 766s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 766s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 766s Setting up gcc (4:13.2.0-7ubuntu1) ... 766s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 766s Setting up r-base-core (4.3.3-2build1) ... 767s 767s Creating config file /etc/R/Renviron with new version 768s Setting up r-cran-crayon (1.5.2-1) ... 768s Setting up libhdf5-dev (1.10.10+repack-3ubuntu1) ... 768s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 768s Setting up r-cran-sourcetools (0.1.7-1-1) ... 768s Setting up r-cran-futile.options (1.0.1-3build1) ... 768s Setting up r-cran-lattice (0.22-5-1) ... 768s Setting up r-cran-formatr (1.14-1) ... 768s Setting up r-cran-xml (3.99-0.16.1-1) ... 768s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 768s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 768s Setting up r-cran-lazyeval (0.2.2-1build1) ... 768s Setting up r-cran-commonmark (1.9.1-1) ... 768s Setting up r-cran-r6 (2.5.1-1) ... 768s Setting up r-cran-pkgkitten (0.2.3-1) ... 768s Setting up r-cran-magrittr (2.0.3-1) ... 768s Setting up r-cran-rappdirs (0.3.3-1) ... 768s Setting up r-cran-filelock (1.0.3-1) ... 768s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 768s Setting up r-cran-littler (0.3.19-1) ... 768s Setting up r-cran-bh (1.84.0-1) ... 768s Setting up r-cran-fs (1.6.3+dfsg-1) ... 768s Setting up r-cran-rcpp (1.0.12-1) ... 768s Setting up r-cran-curl (5.2.0+dfsg-1) ... 768s Setting up r-cran-codetools (0.2-19-1) ... 768s Setting up r-bioc-biocgenerics (0.48.1-2) ... 768s Setting up r-cran-rlang (1.1.3-1) ... 768s Setting up r-cran-matrixstats (1.2.0-1) ... 768s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 768s Setting up r-cran-xfun (0.41+dfsg-1) ... 768s Setting up r-cran-sys (3.4.2-1) ... 768s Setting up r-cran-plogr (0.2.0-3build1) ... 768s Setting up r-cran-withr (2.5.0-1) ... 768s Setting up r-cran-mime (0.12-1) ... 768s Setting up r-cran-generics (0.1.3-1) ... 768s Setting up r-cran-base64enc (0.1-3-3) ... 768s Setting up r-cran-abind (1.4-5-2) ... 768s Setting up r-cran-digest (0.6.34-1) ... 768s Setting up r-cran-yaml (2.3.8-1) ... 768s Setting up r-cran-lambda.r (1.2.4-2build1) ... 768s Setting up r-cran-evaluate (0.23-1) ... 768s Setting up r-cran-dbi (1.2.2-1) ... 768s Setting up r-cran-highr (0.10+dfsg-1) ... 768s Setting up r-cran-prettyunits (1.2.0-1) ... 768s Setting up r-cran-fansi (1.0.5-1) ... 768s Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 768s Setting up r-cran-snow (1:0.4.4-2) ... 768s Setting up r-cran-glue (1.7.0-1) ... 768s Setting up r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 768s Setting up r-cran-bit (4.0.5-1) ... 768s Setting up r-cran-xtable (1:1.8-4-2) ... 768s Setting up r-cran-cli (3.6.2-1) ... 768s Setting up gfortran (4:13.2.0-7ubuntu1) ... 768s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 768s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 768s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 768s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 768s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 769s Setting up r-cran-bitops (1.0-7-1) ... 769s Setting up r-bioc-biocversion (3.18.1-1) ... 769s Setting up r-cran-bit64 (4.0.5-1) ... 769s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 769s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 769s Setting up r-cran-askpass (1.2.0-1) ... 769s Setting up r-cran-fastmap (1.1.1-1) ... 769s Setting up r-cran-png (0.1-8-1) ... 769s Setting up r-bioc-biobase (2.62.0-1) ... 769s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 769s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 769s Setting up r-cran-utf8 (1.2.4-1) ... 769s Setting up r-cran-stringi (1.8.3-1) ... 769s Setting up r-cran-cpp11 (0.4.7-1) ... 769s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 769s Setting up r-cran-runit (0.4.32-3) ... 769s Setting up r-cran-futile.logger (1.4.3-4build1) ... 769s Setting up r-cran-later (1.3.2+dfsg-1) ... 769s Setting up r-cran-matrix (1.6-5-1) ... 769s Setting up r-cran-tinytex (0.49-1) ... 769s Setting up r-cran-knitr (1.45+dfsg-1) ... 769s Setting up g++ (4:13.2.0-7ubuntu1) ... 769s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 769s Setting up r-cran-cachem (1.0.8-1) ... 769s Setting up build-essential (12.10ubuntu1) ... 769s Setting up r-bioc-iranges (2.36.0-1) ... 769s Setting up r-cran-rjson (0.2.21-1) ... 769s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 769s Setting up r-cran-restfulr (0.0.15-1) ... 769s Setting up r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 769s Setting up r-cran-vctrs (0.6.5-1) ... 769s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 769s Setting up r-cran-ellipsis (0.3.2-2) ... 769s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 769s Setting up r-base-dev (4.3.3-2build1) ... 769s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 769s Setting up r-cran-stringr (1.5.1-1) ... 769s Setting up r-bioc-biocparallel (1.36.0-1) ... 769s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 769s Setting up r-cran-xml2 (1.3.6-1) ... 769s Setting up r-bioc-rhdf5 (2.46.1+dfsg-1) ... 769s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 769s Setting up r-cran-survival (3.5-8-1) ... 769s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 769s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 769s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 769s Setting up r-cran-httr (1.4.7+dfsg-1) ... 769s Setting up r-cran-hms (1.1.3-1) ... 769s Setting up r-cran-memoise (2.0.1-1) ... 769s Setting up r-cran-promises (1.2.1+dfsg-1) ... 769s Setting up r-cran-purrr (1.0.2-1) ... 769s Setting up r-cran-blob (1.2.4-1) ... 769s Setting up r-cran-htmltools (0.5.7-1) ... 769s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 769s Setting up r-bioc-xvector (0.42.0-1) ... 769s Setting up r-cran-sass (0.4.8+dfsg-1) ... 769s Setting up r-cran-dplyr (1.1.4-1) ... 769s Setting up r-cran-rsqlite (2.3.4-1) ... 769s Setting up r-cran-progress (1.2.3-1) ... 769s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 769s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 769s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 769s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 769s Setting up r-cran-fontawesome (0.5.2-1) ... 769s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 769s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 769s Setting up r-cran-tidyr (1.3.1-1) ... 769s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 769s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 769s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 769s Setting up r-bioc-hdf5array (1.30.1-1) ... 769s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 769s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 769s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 769s Setting up r-bioc-annotationdbi (1.64.1-1) ... 769s Setting up r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 769s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 769s Setting up r-bioc-annotate (1.80.0+dfsg-1) ... 769s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 769s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 769s Setting up r-bioc-genefilter (1.84.0-1) ... 769s Setting up r-bioc-genomicalignments (1.38.2-1) ... 769s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 769s Setting up r-bioc-rtracklayer (1.62.0-1) ... 769s Setting up r-bioc-singlecellexperiment (1.24.0+ds-1) ... 769s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 769s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 769s Setting up r-cran-dt (0.31+dfsg-1) ... 769s Setting up r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 769s Setting up r-bioc-annotationhub (3.10.0+dfsg-1) ... 769s Setting up r-bioc-experimenthub (2.10.0+ds-1) ... 769s Setting up autopkgtest-satdep (0) ... 769s Processing triggers for man-db (2.12.0-3) ... 775s Processing triggers for install-info (7.1-3) ... 775s Processing triggers for libc-bin (2.39-0ubuntu2) ... 834s (Reading database ... 117020 files and directories currently installed.) 834s Removing autopkgtest-satdep (0) ... 836s autopkgtest [17:48:09]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 836s autopkgtest [17:48:09]: test pkg-r-autopkgtest: [----------------------- 836s Test: Try to load the R library HDF5Array 837s 837s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 837s Copyright (C) 2024 The R Foundation for Statistical Computing 837s Platform: aarch64-unknown-linux-gnu (64-bit) 837s 837s R is free software and comes with ABSOLUTELY NO WARRANTY. 837s You are welcome to redistribute it under certain conditions. 837s Type 'license()' or 'licence()' for distribution details. 837s 837s R is a collaborative project with many contributors. 837s Type 'contributors()' for more information and 837s 'citation()' on how to cite R or R packages in publications. 837s 837s Type 'demo()' for some demos, 'help()' for on-line help, or 837s 'help.start()' for an HTML browser interface to help. 837s Type 'q()' to quit R. 837s 838s > library('HDF5Array') 838s Loading required package: DelayedArray 838s Loading required package: stats4 838s Loading required package: Matrix 844s Loading required package: BiocGenerics 844s 844s Attaching package: ‘BiocGenerics’ 844s 844s The following objects are masked from ‘package:stats’: 844s 844s IQR, mad, sd, var, xtabs 844s 844s The following objects are masked from ‘package:base’: 844s 844s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 844s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 844s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 844s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 844s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 844s table, tapply, union, unique, unsplit, which.max, which.min 844s 844s Loading required package: MatrixGenerics 844s Loading required package: matrixStats 845s 845s Attaching package: ‘MatrixGenerics’ 845s 845s The following objects are masked from ‘package:matrixStats’: 845s 845s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 845s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 845s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 845s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 845s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 845s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 845s colWeightedMeans, colWeightedMedians, colWeightedSds, 845s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 845s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 845s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 845s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 845s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 845s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 845s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 845s rowWeightedSds, rowWeightedVars 845s 845s Loading required package: S4Vectors 849s 849s Attaching package: ‘S4Vectors’ 849s 849s The following objects are masked from ‘package:Matrix’: 849s 849s expand, unname 849s 849s The following object is masked from ‘package:utils’: 849s 849s findMatches 849s 849s The following objects are masked from ‘package:base’: 849s 849s expand.grid, I, unname 849s 849s Loading required package: IRanges 854s Loading required package: S4Arrays 854s Loading required package: abind 855s 855s Attaching package: ‘S4Arrays’ 855s 855s The following object is masked from ‘package:abind’: 855s 855s abind 855s 855s The following object is masked from ‘package:base’: 855s 855s rowsum 855s 855s Loading required package: SparseArray 865s 865s Attaching package: ‘DelayedArray’ 865s 865s The following objects are masked from ‘package:base’: 865s 865s apply, scale, sweep 865s 865s Loading required package: rhdf5 867s 867s Attaching package: ‘HDF5Array’ 867s 867s The following object is masked from ‘package:rhdf5’: 867s 867s h5ls 867s 867s > 867s > 868s Other tests are currently unsupported! 868s They will be progressively added. 868s autopkgtest [17:48:41]: test pkg-r-autopkgtest: -----------------------] 869s pkg-r-autopkgtest PASS 869s autopkgtest [17:48:42]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 870s autopkgtest [17:48:43]: @@@@@@@@@@@@@@@@@@@@ summary 870s pkg-r-autopkgtest PASS 888s Creating nova instance adt-noble-arm64-r-bioc-hdf5array-20240316-173413-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240316.img (UUID 9d2e92bf-2787-45c2-ae22-99fb4bcc175e)...