0s autopkgtest [17:34:09]: starting date and time: 2024-03-16 17:34:09+0000 0s autopkgtest [17:34:09]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:34:09]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8879mrwr/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-gviz --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-4.secgroup --name adt-noble-arm64-r-bioc-gviz-20240316-173409-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 76s autopkgtest [17:35:25]: testbed dpkg architecture: arm64 76s autopkgtest [17:35:25]: testbed apt version: 2.7.12 76s autopkgtest [17:35:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 76s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 77s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 77s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 77s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 77s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 77s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 77s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 77s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 77s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 77s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 77s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 77s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 77s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 79s Fetched 9060 kB in 2s (5398 kB/s) 79s Reading package lists... 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 84s Calculating upgrade... 84s The following packages will be REMOVED: 85s libglib2.0-0 libssl3 85s The following NEW packages will be installed: 85s libglib2.0-0t64 libssl3t64 xdg-user-dirs 85s The following packages have been kept back: 85s curl 85s The following packages will be upgraded: 85s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 85s ubuntu-minimal ubuntu-standard 86s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 86s Need to get 4613 kB of archives. 86s After this operation, 211 kB of additional disk space will be used. 86s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 86s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 86s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 86s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 87s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 87s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 87s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 87s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 87s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 87s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 88s Fetched 4613 kB in 2s (2179 kB/s) 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 88s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 88s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 88s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 88s udisks2 depends on libglib2.0-0 (>= 2.77.0). 88s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 88s python3-gi depends on libglib2.0-0 (>= 2.77.0). 88s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 88s netplan.io depends on libglib2.0-0 (>= 2.70.0). 88s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 88s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 88s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 88s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 88s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 88s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 88s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 88s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 88s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 88s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 88s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 88s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 88s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 88s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 88s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 88s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 88s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 88s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 88s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 88s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 88s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 88s fwupd depends on libglib2.0-0 (>= 2.79.0). 88s bolt depends on libglib2.0-0 (>= 2.56.0). 88s 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 89s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 89s Selecting previously unselected package libglib2.0-0t64:arm64. 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 89s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 89s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 89s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 89s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 89s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 89s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 89s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 89s wget depends on libssl3 (>= 3.0.0). 89s u-boot-tools depends on libssl3 (>= 3.0.0). 89s tnftp depends on libssl3 (>= 3.0.0). 89s tcpdump depends on libssl3 (>= 3.0.0). 89s systemd-resolved depends on libssl3 (>= 3.0.0). 89s systemd depends on libssl3 (>= 3.0.0). 89s sudo depends on libssl3 (>= 3.0.0). 89s sbsigntool depends on libssl3 (>= 3.0.0). 89s rsync depends on libssl3 (>= 3.0.0). 89s python3-cryptography depends on libssl3 (>= 3.0.0). 89s openssh-server depends on libssl3 (>= 3.0.10). 89s openssh-client depends on libssl3 (>= 3.0.10). 89s mtd-utils depends on libssl3 (>= 3.0.0). 89s mokutil depends on libssl3 (>= 3.0.0). 89s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 89s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 89s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 89s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 89s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 89s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 89s libnvme1 depends on libssl3 (>= 3.0.0). 89s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 89s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 89s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 89s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 89s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 89s kmod depends on libssl3 (>= 3.0.0). 89s dhcpcd-base depends on libssl3 (>= 3.0.0). 89s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 89s 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 89s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 89s Selecting previously unselected package libssl3t64:arm64. 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 89s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 89s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 89s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 89s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 89s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 89s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 89s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 89s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 90s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 90s Unpacking ubuntu-minimal (1.536) over (1.535) ... 90s Selecting previously unselected package xdg-user-dirs. 90s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 90s Unpacking xdg-user-dirs (0.18-1) ... 90s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 90s Unpacking ubuntu-standard (1.536) over (1.535) ... 90s Setting up ubuntu-minimal (1.536) ... 90s Setting up xdg-user-dirs (0.18-1) ... 90s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 90s Setting up libtirpc-common (1.3.4+ds-1.1) ... 90s Setting up ubuntu-standard (1.536) ... 90s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 91s No schema files found: doing nothing. 91s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 91s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 91s Setting up openssl (3.0.13-0ubuntu1) ... 91s Setting up readline-common (8.2-3.1) ... 91s Processing triggers for man-db (2.12.0-3) ... 92s Processing triggers for install-info (7.1-3) ... 92s Processing triggers for libc-bin (2.39-0ubuntu2) ... 92s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 94s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 94s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 94s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 94s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 95s Reading package lists... 95s Reading package lists... 96s Building dependency tree... 96s Reading state information... 96s Calculating upgrade... 96s The following packages have been kept back: 96s curl 96s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 96s Reading package lists... 97s Building dependency tree... 97s Reading state information... 97s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 100s autopkgtest [17:35:49]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 100s autopkgtest [17:35:49]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-gviz 103s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-gviz 1.46.1+dfsg-1 (dsc) [2484 B] 103s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-gviz 1.46.1+dfsg-1 (tar) [3824 kB] 103s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-gviz 1.46.1+dfsg-1 (diff) [7136 B] 103s gpgv: Signature made Fri Dec 8 14:53:02 2023 UTC 103s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 103s gpgv: issuer "tille@debian.org" 103s gpgv: Can't check signature: No public key 103s dpkg-source: warning: cannot verify inline signature for ./r-bioc-gviz_1.46.1+dfsg-1.dsc: no acceptable signature found 104s autopkgtest [17:35:53]: testing package r-bioc-gviz version 1.46.1+dfsg-1 105s autopkgtest [17:35:54]: build not needed 108s autopkgtest [17:35:57]: test pkg-r-autopkgtest: preparing testbed 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 112s Starting pkgProblemResolver with broken count: 0 112s Starting 2 pkgProblemResolver with broken count: 0 112s Done 112s The following additional packages will be installed: 112s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 112s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 112s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 112s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 112s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 112s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 112s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 112s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libboost-dev 112s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 112s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 112s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 112s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 112s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 112s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 112s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 112s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 112s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 112s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 112s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 112s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 112s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 112s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 112s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 112s libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 112s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 112s libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 112s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 112s libzzip-0-13 linux-libc-dev node-bootstrap-sass node-html5shiv 112s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 112s pkgconf-bin r-base-core r-base-dev r-bioc-annotationdbi 112s r-bioc-annotationfilter r-bioc-biobase r-bioc-biocfilecache 112s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 112s r-bioc-biomart r-bioc-biostrings r-bioc-biovizbase r-bioc-bsgenome 112s r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 112s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 112s r-bioc-genomicranges r-bioc-gviz r-bioc-iranges r-bioc-keggrest 112s r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 112s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 112s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 112s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 112s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 112s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-bslib 112s r-cran-cachem r-cran-callr r-cran-checkmate r-cran-chron r-cran-cli 112s r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-commonmark 112s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi 112s r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj 112s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 112s r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 112s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 112s r-cran-futile.options r-cran-generics r-cran-ggplot2 r-cran-glue 112s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hmisc r-cran-hms 112s r-cran-htmltable r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv 112s r-cran-httr r-cran-interp r-cran-isoband r-cran-jpeg r-cran-jquerylib 112s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 112s r-cran-lattice r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle 112s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 112s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 112s r-cran-nnet r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 112s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 112s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 112s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 112s r-cran-rcppeigen r-cran-rcurl r-cran-rematch2 r-cran-restfulr r-cran-rjson 112s r-cran-rlang r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 112s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 112s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 112s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 112s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo 112s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 112s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 112s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 112s zlib1g-dev 112s Suggested packages: 112s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 112s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 112s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 112s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 112s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 112s libboost-context1.83-dev libboost-contract1.83-dev 112s libboost-coroutine1.83-dev libboost-date-time1.83-dev 112s libboost-exception1.83-dev libboost-fiber1.83-dev 112s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 112s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 112s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 112s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 112s libboost-numpy1.83-dev libboost-program-options1.83-dev 112s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 112s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 112s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 112s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 112s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 112s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 112s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 112s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 112s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 112s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 112s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 112s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 112s r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all 112s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 112s r-cran-doparallel r-bioc-shortread r-cran-batchtools r-cran-mockery 112s r-cran-webmockr r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 112s r-bioc-delayedmatrixstats r-bioc-ggbio r-bioc-annotationhub r-cran-r.utils 112s r-bioc-edger r-cran-markdown r-bioc-dexseq r-bioc-sparsematrixstats 112s r-bioc-limma r-bioc-rhdf5 r-bioc-snpstats r-cran-roxygen2 r-cran-ff 112s r-cran-covr r-cran-spelling r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm 112s r-cran-vcd r-cran-shinyjs r-cran-rmysql r-cran-polyclip r-cran-lubridate 112s r-cran-sp r-cran-scatterplot3d r-cran-magick r-cran-sf r-cran-getopt 112s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 112s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-bench 112s r-cran-here r-cran-plm r-cran-zoo debhelper ghostscript gv 112s | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 112s hintview texlive-latex-base-doc wp2latex 112s Recommended packages: 112s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 112s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 112s r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot 112s r-cran-covr r-cran-thematic r-cran-cliapp r-cran-mockery r-cran-fastmatch 112s r-cran-devtools r-cran-tinytest r-cran-whoami r-cran-bench r-cran-decor 112s r-cran-lobstr r-cran-spelling r-cran-webutils r-cran-r.utils r-cran-xts 112s r-cran-nanotime r-cran-zoo r-cran-rpostgresql r-cran-gh r-cran-broom 112s r-cran-rmysql r-cran-unitizer r-cran-rsvg r-cran-hexbin r-cran-mapproj 112s r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg 112s r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-cairo r-cran-markdown 112s r-cran-readr r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate 112s r-cran-rgl r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 112s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-mathjaxr r-cran-mockr 112s r-cran-webfakes r-cran-future r-cran-pingr r-cran-runit r-cran-usethis 112s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-rvest r-cran-formattable 112s r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 112s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 112s x11-xserver-utils 112s The following packages will be REMOVED: 112s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 112s The following NEW packages will be installed: 112s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 112s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 112s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 112s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 112s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 112s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 112s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 112s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 112s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 112s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 112s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 112s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 112s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 112s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 112s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 112s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 112s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 112s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 112s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 112s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 112s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 112s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 112s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpotrace0 libpsl5t64 112s libptexenc1 libreadline-dev libreadline8t64 libsharpyuv0 libsm6 112s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 112s libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 112s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 112s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev 112s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 112s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 112s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 112s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 112s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-biovizbase 112s r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 112s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 112s r-bioc-genomicranges r-bioc-gviz r-bioc-iranges r-bioc-keggrest 112s r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 112s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 112s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 112s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 112s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 112s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-bslib 112s r-cran-cachem r-cran-callr r-cran-checkmate r-cran-chron r-cran-cli 112s r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-commonmark 112s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi 112s r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj 112s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 112s r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 112s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 112s r-cran-futile.options r-cran-generics r-cran-ggplot2 r-cran-glue 112s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hmisc r-cran-hms 112s r-cran-htmltable r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv 112s r-cran-httr r-cran-interp r-cran-isoband r-cran-jpeg r-cran-jquerylib 112s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 112s r-cran-lattice r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle 112s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 112s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 112s r-cran-nnet r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 112s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 112s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 112s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 112s r-cran-rcppeigen r-cran-rcurl r-cran-rematch2 r-cran-restfulr r-cran-rjson 112s r-cran-rlang r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 112s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 112s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 112s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 112s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo 112s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 112s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 112s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 112s zlib1g-dev 112s The following packages will be upgraded: 112s curl 113s 1 upgraded, 336 newly installed, 5 to remove and 0 not upgraded. 113s Need to get 481 MB/481 MB of archives. 113s After this operation, 1434 MB of additional disk space will be used. 113s Get:1 /tmp/autopkgtest.8aXoIs/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [764 B] 113s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 113s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 113s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 113s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 113s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 113s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 113s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 113s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 114s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 114s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 114s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 114s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 114s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 114s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 114s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 114s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 115s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 115s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 115s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 115s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 115s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 115s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 115s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 115s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 115s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 115s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 116s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 116s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 116s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 116s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 117s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 117s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 117s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 117s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 117s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 117s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 117s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 117s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 117s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 117s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 117s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 117s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 117s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 117s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 117s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 117s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 117s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 117s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 117s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 117s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 117s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 117s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 117s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 117s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 117s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 117s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 117s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 117s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 117s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 117s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 117s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 117s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 117s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 118s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 118s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 118s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 118s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 118s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 118s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 118s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 118s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 118s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 118s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 118s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 118s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 118s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 118s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 118s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 118s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 118s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 118s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 118s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 118s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 118s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 118s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 118s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 118s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 118s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 118s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 118s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 118s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 118s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 118s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 118s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 118s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 118s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 118s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 118s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 118s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 118s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 118s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 119s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 119s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 119s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 119s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 119s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 119s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 119s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 119s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 119s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 119s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 119s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 119s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 119s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 119s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 119s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 119s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 119s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 119s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 119s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 119s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 119s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 119s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 119s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 119s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 119s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 119s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 119s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 119s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 119s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 119s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 119s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 119s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 119s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 119s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 119s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 119s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 119s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 119s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 120s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 120s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 120s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 120s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 121s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 121s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 121s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 121s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 121s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 121s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 121s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 122s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 122s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 122s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 122s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 122s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 122s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 122s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 122s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 122s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 122s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 122s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 122s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 122s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 122s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 122s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 122s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 122s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 122s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 122s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 122s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 122s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 122s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 122s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 122s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 122s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 122s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 122s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 122s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 122s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 122s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 122s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 122s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 122s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 122s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 122s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 122s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 122s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 123s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 123s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 123s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 123s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 123s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 123s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 124s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 124s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 124s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 124s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 124s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 124s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 124s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 124s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 124s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 124s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 124s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 124s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 124s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 124s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 124s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 124s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 124s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 124s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 125s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 125s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 125s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 125s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 125s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 125s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 125s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 125s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 125s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 125s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 125s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 125s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 125s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 125s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 125s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 125s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 125s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 125s Get:230 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 125s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 125s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 125s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 125s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 125s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 125s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 125s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 125s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 125s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 125s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 125s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 125s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 125s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 125s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 125s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 125s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 125s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 125s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 125s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 125s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 126s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 126s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 126s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 126s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 126s Get:255 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 126s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 126s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 127s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 127s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 130s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 130s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 130s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 130s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 130s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 130s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 130s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 130s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-farver arm64 2.1.1-1 [1336 kB] 130s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 130s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 130s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-munsell all 0.5.0-2build1 [208 kB] 130s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 130s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 130s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 130s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 130s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 130s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 130s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 130s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB] 130s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 131s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 131s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 131s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cluster arm64 2.1.6-1 [552 kB] 131s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 131s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rpart arm64 4.1.23-1 [660 kB] 131s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nnet arm64 7.3-19-2 [111 kB] 131s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-foreign arm64 0.8.86-1 [240 kB] 131s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 131s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-data.table arm64 1.14.10+dfsg-1 [1844 kB] 131s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-backports arm64 1.4.1-1 [101 kB] 131s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-checkmate arm64 2.3.1-1 [711 kB] 131s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 131s Get:292 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rstudioapi all 0.15.0-1 [277 kB] 131s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltable all 2.4.2-1 [381 kB] 131s Get:294 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 131s Get:295 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 131s Get:296 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-chron arm64 2.3-61-2 [186 kB] 131s Get:297 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jpeg arm64 0.1-10-1 [30.8 kB] 131s Get:298 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-deldir arm64 2.0-4-1 [270 kB] 131s Get:299 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcppeigen arm64 0.3.3.9.4-1 [1180 kB] 131s Get:300 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-interp arm64 1.1-6-1 [1433 kB] 131s Get:301 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-latticeextra all 0.6-30-1 [2198 kB] 131s Get:302 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-acepack arm64 1.4.2-1 [60.5 kB] 131s Get:303 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hmisc arm64 5.1-1-1 [3486 kB] 132s Get:304 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dichromat all 1:2.0-0.1-1 [148 kB] 132s Get:305 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 132s Get:306 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 132s Get:307 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 132s Get:308 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 132s Get:309 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 132s Get:310 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 132s Get:311 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 132s Get:312 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 133s Get:313 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 133s Get:314 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 133s Get:315 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 133s Get:316 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 133s Get:317 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 133s Get:318 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 133s Get:319 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-bsgenome all 1.70.2-1 [6975 kB] 134s Get:320 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-variantannotation arm64 1.48.1-1 [3526 kB] 134s Get:321 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-protgenerics all 1.34.0-1 [225 kB] 134s Get:322 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 134s Get:323 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biovizbase arm64 1.50.0-1 [2665 kB] 134s Get:324 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-gviz all 1.46.1+dfsg-1 [4855 kB] 134s Get:325 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 134s Get:326 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 134s Get:327 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 134s Get:328 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 134s Get:329 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 134s Get:330 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 134s Get:331 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 134s Get:332 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 134s Get:333 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 134s Get:334 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 134s Get:335 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 134s Get:336 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 134s Get:337 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 137s Preconfiguring packages ... 137s Fetched 481 MB in 22s (22.3 MB/s) 137s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 137s wget depends on libpsl5 (>= 0.16.0). 137s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 137s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 137s 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 137s Removing libpsl5:arm64 (0.21.2-1build1) ... 137s Selecting previously unselected package libpsl5t64:arm64. 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 137s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 137s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 137s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 137s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 137s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 137s Selecting previously unselected package libcurl4t64:arm64. 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 137s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 137s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 137s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 137s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 137s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 137s 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 137s Removing libpng16-16:arm64 (1.6.43-1) ... 138s Selecting previously unselected package libpng16-16t64:arm64. 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 138s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 138s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 138s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 138s parted depends on libreadline8 (>= 6.0). 138s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 138s gpgsm depends on libreadline8 (>= 6.0). 138s gpgconf depends on libreadline8 (>= 6.0). 138s gpg depends on libreadline8 (>= 6.0). 138s gawk depends on libreadline8 (>= 6.0). 138s fdisk depends on libreadline8 (>= 6.0). 138s 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 138s Removing libreadline8:arm64 (8.2-3) ... 138s Selecting previously unselected package libreadline8t64:arm64. 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 138s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 138s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 138s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 138s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 138s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 138s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 138s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 138s lsof depends on libtirpc3 (>= 1.0.2). 138s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 138s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 138s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 138s iproute2 depends on libtirpc3 (>= 1.0.2). 138s 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 138s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 138s Selecting previously unselected package libtirpc3t64:arm64. 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 138s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 138s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 138s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 138s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 138s Selecting previously unselected package libc-dev-bin. 138s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 138s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 138s Selecting previously unselected package linux-libc-dev:arm64. 138s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 138s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 138s Selecting previously unselected package libcrypt-dev:arm64. 138s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 138s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 138s Selecting previously unselected package libtirpc-dev:arm64. 138s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 138s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 138s Selecting previously unselected package libnsl-dev:arm64. 138s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 138s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 138s Selecting previously unselected package rpcsvc-proto. 138s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 138s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 138s Selecting previously unselected package libc6-dev:arm64. 139s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 139s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 139s Selecting previously unselected package libisl23:arm64. 139s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 139s Unpacking libisl23:arm64 (0.26-3) ... 139s Selecting previously unselected package libmpc3:arm64. 139s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 139s Unpacking libmpc3:arm64 (1.3.1-1) ... 139s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 139s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 139s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package cpp-13. 139s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 139s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package cpp-aarch64-linux-gnu. 139s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 139s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package cpp. 139s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 139s Unpacking cpp (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package libcc1-0:arm64. 139s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 139s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 139s Selecting previously unselected package libgomp1:arm64. 139s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 139s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 139s Selecting previously unselected package libitm1:arm64. 139s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 139s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 139s Selecting previously unselected package libatomic1:arm64. 140s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 140s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package libasan8:arm64. 140s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 140s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package liblsan0:arm64. 140s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 140s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package libtsan2:arm64. 140s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 140s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package libubsan1:arm64. 140s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 140s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package libhwasan0:arm64. 140s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 140s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package libgcc-13-dev:arm64. 140s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 140s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 140s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 140s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 140s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 141s Selecting previously unselected package gcc-13. 141s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 141s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 141s Selecting previously unselected package gcc-aarch64-linux-gnu. 141s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 141s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 141s Selecting previously unselected package gcc. 141s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 141s Unpacking gcc (4:13.2.0-7ubuntu1) ... 141s Selecting previously unselected package libstdc++-13-dev:arm64. 141s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 141s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 142s Selecting previously unselected package g++-13-aarch64-linux-gnu. 142s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 142s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 142s Selecting previously unselected package g++-13. 142s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 142s Unpacking g++-13 (13.2.0-17ubuntu2) ... 142s Selecting previously unselected package g++-aarch64-linux-gnu. 142s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 142s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 142s Selecting previously unselected package g++. 142s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 142s Unpacking g++ (4:13.2.0-7ubuntu1) ... 142s Selecting previously unselected package build-essential. 142s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 142s Unpacking build-essential (12.10ubuntu1) ... 142s Selecting previously unselected package dctrl-tools. 142s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 142s Unpacking dctrl-tools (2.24-3build2) ... 142s Selecting previously unselected package fonts-dejavu-mono. 142s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 142s Unpacking fonts-dejavu-mono (2.37-8) ... 142s Selecting previously unselected package fonts-dejavu-core. 142s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 143s Unpacking fonts-dejavu-core (2.37-8) ... 143s Selecting previously unselected package fontconfig-config. 143s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 143s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 143s Selecting previously unselected package libfontconfig1:arm64. 143s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 143s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 143s Selecting previously unselected package fontconfig. 143s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 143s Unpacking fontconfig (2.15.0-1ubuntu1) ... 143s Selecting previously unselected package fonts-font-awesome. 144s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 144s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 144s Selecting previously unselected package fonts-glyphicons-halflings. 144s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 144s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 144s Selecting previously unselected package fonts-lmodern. 144s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 144s Unpacking fonts-lmodern (2.005-1) ... 144s Selecting previously unselected package fonts-mathjax. 144s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 144s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 144s Selecting previously unselected package libgfortran5:arm64. 144s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 144s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 144s Selecting previously unselected package libgfortran-13-dev:arm64. 144s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 144s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 144s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 144s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 144s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 145s Selecting previously unselected package gfortran-13. 145s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 145s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 145s Selecting previously unselected package gfortran-aarch64-linux-gnu. 145s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 145s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 145s Selecting previously unselected package gfortran. 145s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 145s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 145s Selecting previously unselected package icu-devtools. 145s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 145s Unpacking icu-devtools (74.2-1ubuntu1) ... 145s Selecting previously unselected package javascript-common. 145s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 145s Unpacking javascript-common (11+nmu1) ... 145s Selecting previously unselected package libio-string-perl. 145s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 145s Unpacking libio-string-perl (1.08-4) ... 145s Selecting previously unselected package liblatex-tounicode-perl. 145s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 145s Unpacking liblatex-tounicode-perl (0.54-2) ... 145s Selecting previously unselected package libbibtex-parser-perl. 145s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 145s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 145s Selecting previously unselected package libblas3:arm64. 145s Preparing to unpack .../055-libblas3_3.12.0-3_arm64.deb ... 145s Unpacking libblas3:arm64 (3.12.0-3) ... 145s Selecting previously unselected package libblas-dev:arm64. 145s Preparing to unpack .../056-libblas-dev_3.12.0-3_arm64.deb ... 145s Unpacking libblas-dev:arm64 (3.12.0-3) ... 145s Selecting previously unselected package libboost1.83-dev:arm64. 145s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 145s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 147s Selecting previously unselected package libboost-dev:arm64. 147s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 147s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 147s Selecting previously unselected package libbz2-dev:arm64. 147s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 147s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 147s Selecting previously unselected package libpixman-1-0:arm64. 147s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_arm64.deb ... 147s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 147s Selecting previously unselected package libxcb-render0:arm64. 147s Preparing to unpack .../061-libxcb-render0_1.15-1_arm64.deb ... 147s Unpacking libxcb-render0:arm64 (1.15-1) ... 147s Selecting previously unselected package libxcb-shm0:arm64. 147s Preparing to unpack .../062-libxcb-shm0_1.15-1_arm64.deb ... 147s Unpacking libxcb-shm0:arm64 (1.15-1) ... 147s Selecting previously unselected package libxrender1:arm64. 147s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 147s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 147s Selecting previously unselected package libcairo2:arm64. 147s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 147s Unpacking libcairo2:arm64 (1.18.0-1) ... 147s Selecting previously unselected package libdatrie1:arm64. 147s Preparing to unpack .../065-libdatrie1_0.2.13-3_arm64.deb ... 147s Unpacking libdatrie1:arm64 (0.2.13-3) ... 147s Selecting previously unselected package libdeflate0:arm64. 147s Preparing to unpack .../066-libdeflate0_1.19-1_arm64.deb ... 147s Unpacking libdeflate0:arm64 (1.19-1) ... 147s Selecting previously unselected package libgraphite2-3:arm64. 148s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_arm64.deb ... 148s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 148s Selecting previously unselected package libharfbuzz0b:arm64. 148s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_arm64.deb ... 148s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 148s Selecting previously unselected package x11-common. 148s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 148s Unpacking x11-common (1:7.7+23ubuntu2) ... 148s Selecting previously unselected package libice6:arm64. 148s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_arm64.deb ... 148s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 148s Selecting previously unselected package libicu-dev:arm64. 148s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_arm64.deb ... 148s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 148s Selecting previously unselected package libjpeg-turbo8:arm64. 148s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 148s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 148s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 148s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 148s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 148s Selecting previously unselected package libjpeg8:arm64. 148s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_arm64.deb ... 148s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 148s Selecting previously unselected package libjpeg8-dev:arm64. 148s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 148s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 148s Selecting previously unselected package libjpeg-dev:arm64. 148s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 148s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 148s Selecting previously unselected package libjs-bootstrap. 148s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 148s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 148s Selecting previously unselected package libjs-popper.js. 148s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 148s Unpacking libjs-popper.js (1.16.1+ds-6) ... 148s Selecting previously unselected package libjs-bootstrap4. 148s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 149s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 149s Selecting previously unselected package libjs-d3. 149s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 149s Unpacking libjs-d3 (3.5.17-4) ... 149s Selecting previously unselected package libjs-es5-shim. 149s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 149s Unpacking libjs-es5-shim (4.6.7-2) ... 149s Selecting previously unselected package libjs-highlight.js. 149s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 149s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 149s Selecting previously unselected package libjs-jquery. 149s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 149s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 149s Selecting previously unselected package libjs-jquery-datatables. 149s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 149s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 149s Selecting previously unselected package libjs-sifter.js. 149s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 149s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 149s Selecting previously unselected package libjs-microplugin.js. 149s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 149s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 149s Selecting previously unselected package libjs-jquery-selectize.js. 149s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 149s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 149s Selecting previously unselected package libjs-jquery-ui. 149s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 149s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 149s Selecting previously unselected package libjs-json. 149s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 149s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 149s Selecting previously unselected package libjs-lunr. 149s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 149s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 149s Selecting previously unselected package libjs-prettify. 149s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 149s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 149s Selecting previously unselected package libkpathsea6:arm64. 149s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 149s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 149s Selecting previously unselected package liblapack3:arm64. 149s Preparing to unpack .../093-liblapack3_3.12.0-3_arm64.deb ... 149s Unpacking liblapack3:arm64 (3.12.0-3) ... 150s Selecting previously unselected package liblapack-dev:arm64. 150s Preparing to unpack .../094-liblapack-dev_3.12.0-3_arm64.deb ... 150s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 150s Selecting previously unselected package liblerc4:arm64. 150s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 150s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 150s Selecting previously unselected package liblua5.4-0:arm64. 150s Preparing to unpack .../096-liblua5.4-0_5.4.6-3_arm64.deb ... 150s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 150s Selecting previously unselected package libncurses-dev:arm64. 150s Preparing to unpack .../097-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 150s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 150s Selecting previously unselected package libthai-data. 151s Preparing to unpack .../098-libthai-data_0.1.29-2_all.deb ... 151s Unpacking libthai-data (0.1.29-2) ... 151s Selecting previously unselected package libthai0:arm64. 151s Preparing to unpack .../099-libthai0_0.1.29-2_arm64.deb ... 151s Unpacking libthai0:arm64 (0.1.29-2) ... 151s Selecting previously unselected package libpango-1.0-0:arm64. 151s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 151s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 151s Selecting previously unselected package libpangoft2-1.0-0:arm64. 151s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 151s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 151s Selecting previously unselected package libpangocairo-1.0-0:arm64. 151s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 151s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 151s Selecting previously unselected package libpaper1:arm64. 151s Preparing to unpack .../103-libpaper1_1.1.29_arm64.deb ... 151s Unpacking libpaper1:arm64 (1.1.29) ... 151s Selecting previously unselected package libpaper-utils. 151s Preparing to unpack .../104-libpaper-utils_1.1.29_arm64.deb ... 151s Unpacking libpaper-utils (1.1.29) ... 151s Selecting previously unselected package libpcre2-16-0:arm64. 151s Preparing to unpack .../105-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 151s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 151s Selecting previously unselected package libpcre2-32-0:arm64. 151s Preparing to unpack .../106-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 151s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 151s Selecting previously unselected package libpcre2-posix3:arm64. 151s Preparing to unpack .../107-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 151s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 151s Selecting previously unselected package libpcre2-dev:arm64. 151s Preparing to unpack .../108-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 151s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 151s Selecting previously unselected package libpkgconf3:arm64. 151s Preparing to unpack .../109-libpkgconf3_1.8.1-2_arm64.deb ... 151s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 151s Selecting previously unselected package zlib1g-dev:arm64. 151s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 151s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 151s Selecting previously unselected package libpng-dev:arm64. 151s Preparing to unpack .../111-libpng-dev_1.6.43-3_arm64.deb ... 151s Unpacking libpng-dev:arm64 (1.6.43-3) ... 151s Selecting previously unselected package libpotrace0:arm64. 151s Preparing to unpack .../112-libpotrace0_1.16-2_arm64.deb ... 151s Unpacking libpotrace0:arm64 (1.16-2) ... 151s Selecting previously unselected package libptexenc1:arm64. 151s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_arm64.deb ... 151s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 151s Selecting previously unselected package libreadline-dev:arm64. 151s Preparing to unpack .../114-libreadline-dev_8.2-3.1_arm64.deb ... 151s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 151s Selecting previously unselected package libsharpyuv0:arm64. 152s Preparing to unpack .../115-libsharpyuv0_1.3.2-0.4_arm64.deb ... 152s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 152s Selecting previously unselected package libsm6:arm64. 152s Preparing to unpack .../116-libsm6_2%3a1.2.3-1build2_arm64.deb ... 152s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 152s Selecting previously unselected package libsynctex2:arm64. 152s Preparing to unpack .../117-libsynctex2_2023.20230311.66589-9_arm64.deb ... 152s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 152s Selecting previously unselected package libtcl8.6:arm64. 152s Preparing to unpack .../118-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 152s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 152s Selecting previously unselected package libteckit0:arm64. 152s Preparing to unpack .../119-libteckit0_2.5.12+ds1-1_arm64.deb ... 152s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 152s Selecting previously unselected package libtexlua53-5:arm64. 152s Preparing to unpack .../120-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 152s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 152s Selecting previously unselected package libjbig0:arm64. 152s Preparing to unpack .../121-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 152s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 152s Selecting previously unselected package libwebp7:arm64. 152s Preparing to unpack .../122-libwebp7_1.3.2-0.4_arm64.deb ... 152s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 152s Selecting previously unselected package libtiff6:arm64. 152s Preparing to unpack .../123-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 152s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 152s Selecting previously unselected package libxft2:arm64. 152s Preparing to unpack .../124-libxft2_2.3.6-1_arm64.deb ... 152s Unpacking libxft2:arm64 (2.3.6-1) ... 152s Selecting previously unselected package libxss1:arm64. 153s Preparing to unpack .../125-libxss1_1%3a1.2.3-1build2_arm64.deb ... 153s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 153s Selecting previously unselected package libtk8.6:arm64. 153s Preparing to unpack .../126-libtk8.6_8.6.13-2_arm64.deb ... 153s Unpacking libtk8.6:arm64 (8.6.13-2) ... 153s Selecting previously unselected package libxt6t64:arm64. 153s Preparing to unpack .../127-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 153s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 153s Selecting previously unselected package libxmu6:arm64. 153s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_arm64.deb ... 153s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 153s Selecting previously unselected package libxpm4:arm64. 154s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_arm64.deb ... 154s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 154s Selecting previously unselected package libxaw7:arm64. 154s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_arm64.deb ... 154s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 154s Selecting previously unselected package libxi6:arm64. 154s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_arm64.deb ... 154s Unpacking libxi6:arm64 (2:1.8.1-1) ... 154s Selecting previously unselected package libzzip-0-13:arm64. 154s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 154s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 154s Selecting previously unselected package node-bootstrap-sass. 154s Preparing to unpack .../133-node-bootstrap-sass_3.4.3-2_all.deb ... 154s Unpacking node-bootstrap-sass (3.4.3-2) ... 154s Selecting previously unselected package node-html5shiv. 154s Preparing to unpack .../134-node-html5shiv_3.7.3+dfsg-5_all.deb ... 154s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 154s Selecting previously unselected package node-normalize.css. 154s Preparing to unpack .../135-node-normalize.css_8.0.1-5_all.deb ... 154s Unpacking node-normalize.css (8.0.1-5) ... 154s Selecting previously unselected package pandoc-data. 154s Preparing to unpack .../136-pandoc-data_3.1.3-1_all.deb ... 154s Unpacking pandoc-data (3.1.3-1) ... 154s Selecting previously unselected package pandoc. 154s Preparing to unpack .../137-pandoc_3.1.3+ds-2_arm64.deb ... 154s Unpacking pandoc (3.1.3+ds-2) ... 155s Selecting previously unselected package pkgconf-bin. 155s Preparing to unpack .../138-pkgconf-bin_1.8.1-2_arm64.deb ... 155s Unpacking pkgconf-bin (1.8.1-2) ... 155s Selecting previously unselected package pkgconf:arm64. 155s Preparing to unpack .../139-pkgconf_1.8.1-2_arm64.deb ... 155s Unpacking pkgconf:arm64 (1.8.1-2) ... 155s Selecting previously unselected package pkg-config:arm64. 155s Preparing to unpack .../140-pkg-config_1.8.1-2_arm64.deb ... 155s Unpacking pkg-config:arm64 (1.8.1-2) ... 155s Selecting previously unselected package zip. 155s Preparing to unpack .../141-zip_3.0-13_arm64.deb ... 155s Unpacking zip (3.0-13) ... 155s Selecting previously unselected package unzip. 155s Preparing to unpack .../142-unzip_6.0-28ubuntu3_arm64.deb ... 155s Unpacking unzip (6.0-28ubuntu3) ... 156s Selecting previously unselected package xdg-utils. 156s Preparing to unpack .../143-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 156s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 156s Selecting previously unselected package r-base-core. 156s Preparing to unpack .../144-r-base-core_4.3.3-2build1_arm64.deb ... 156s Unpacking r-base-core (4.3.3-2build1) ... 156s Selecting previously unselected package liblzma-dev:arm64. 156s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_arm64.deb ... 156s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 156s Selecting previously unselected package r-base-dev. 156s Preparing to unpack .../146-r-base-dev_4.3.3-2build1_all.deb ... 156s Unpacking r-base-dev (4.3.3-2build1) ... 156s Selecting previously unselected package pkg-r-autopkgtest. 156s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 156s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 156s Selecting previously unselected package r-bioc-biocgenerics. 156s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 156s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 156s Selecting previously unselected package r-bioc-biobase. 156s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_arm64.deb ... 156s Unpacking r-bioc-biobase (2.62.0-1) ... 156s Selecting previously unselected package r-bioc-s4vectors. 156s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 156s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 156s Selecting previously unselected package r-bioc-iranges. 157s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_arm64.deb ... 157s Unpacking r-bioc-iranges (2.36.0-1) ... 157s Selecting previously unselected package r-cran-dbi. 157s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 157s Unpacking r-cran-dbi (1.2.2-1) ... 157s Selecting previously unselected package r-cran-bit. 157s Preparing to unpack .../153-r-cran-bit_4.0.5-1_arm64.deb ... 157s Unpacking r-cran-bit (4.0.5-1) ... 157s Selecting previously unselected package r-cran-bit64. 157s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_arm64.deb ... 157s Unpacking r-cran-bit64 (4.0.5-1) ... 157s Selecting previously unselected package r-cran-rlang. 157s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_arm64.deb ... 157s Unpacking r-cran-rlang (1.1.3-1) ... 157s Selecting previously unselected package r-cran-cli. 157s Preparing to unpack .../156-r-cran-cli_3.6.2-1_arm64.deb ... 157s Unpacking r-cran-cli (3.6.2-1) ... 157s Selecting previously unselected package r-cran-glue. 157s Preparing to unpack .../157-r-cran-glue_1.7.0-1_arm64.deb ... 157s Unpacking r-cran-glue (1.7.0-1) ... 157s Selecting previously unselected package r-cran-lifecycle. 157s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 157s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 157s Selecting previously unselected package r-cran-vctrs. 157s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_arm64.deb ... 157s Unpacking r-cran-vctrs (0.6.5-1) ... 157s Selecting previously unselected package r-cran-blob. 157s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 157s Unpacking r-cran-blob (1.2.4-1) ... 157s Selecting previously unselected package r-cran-fastmap. 157s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_arm64.deb ... 157s Unpacking r-cran-fastmap (1.1.1-1) ... 157s Selecting previously unselected package r-cran-cachem. 157s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_arm64.deb ... 157s Unpacking r-cran-cachem (1.0.8-1) ... 158s Selecting previously unselected package r-cran-memoise. 158s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 158s Unpacking r-cran-memoise (2.0.1-1) ... 158s Selecting previously unselected package r-cran-pkgconfig. 158s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 158s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 158s Selecting previously unselected package r-cran-plogr. 158s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 158s Unpacking r-cran-plogr (0.2.0-3build1) ... 158s Selecting previously unselected package r-cran-cpp11. 158s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 158s Unpacking r-cran-cpp11 (0.4.7-1) ... 158s Selecting previously unselected package r-cran-rsqlite. 158s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_arm64.deb ... 158s Unpacking r-cran-rsqlite (2.3.4-1) ... 158s Selecting previously unselected package r-cran-curl. 158s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 158s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 158s Selecting previously unselected package r-cran-jsonlite. 158s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 158s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 158s Selecting previously unselected package r-cran-mime. 158s Preparing to unpack .../170-r-cran-mime_0.12-1_arm64.deb ... 158s Unpacking r-cran-mime (0.12-1) ... 158s Selecting previously unselected package r-cran-sys. 158s Preparing to unpack .../171-r-cran-sys_3.4.2-1_arm64.deb ... 158s Unpacking r-cran-sys (3.4.2-1) ... 158s Selecting previously unselected package r-cran-askpass. 158s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_arm64.deb ... 158s Unpacking r-cran-askpass (1.2.0-1) ... 158s Selecting previously unselected package r-cran-openssl. 158s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 158s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 158s Selecting previously unselected package r-cran-r6. 158s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 158s Unpacking r-cran-r6 (2.5.1-1) ... 158s Selecting previously unselected package r-cran-httr. 158s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 158s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 158s Selecting previously unselected package r-cran-png. 158s Preparing to unpack .../176-r-cran-png_0.1-8-1_arm64.deb ... 158s Unpacking r-cran-png (0.1-8-1) ... 158s Selecting previously unselected package r-bioc-zlibbioc. 158s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 158s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 158s Selecting previously unselected package r-bioc-xvector. 158s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_arm64.deb ... 158s Unpacking r-bioc-xvector (0.42.0-1) ... 158s Selecting previously unselected package r-cran-bitops. 158s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_arm64.deb ... 158s Unpacking r-cran-bitops (1.0-7-1) ... 158s Selecting previously unselected package r-cran-rcurl. 158s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 158s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 158s Selecting previously unselected package r-bioc-genomeinfodbdata. 159s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 159s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 159s Selecting previously unselected package r-bioc-genomeinfodb. 159s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 159s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 159s Selecting previously unselected package r-cran-crayon. 159s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 159s Unpacking r-cran-crayon (1.5.2-1) ... 159s Selecting previously unselected package r-bioc-biostrings. 159s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 159s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 159s Selecting previously unselected package r-bioc-keggrest. 159s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 159s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 159s Selecting previously unselected package r-bioc-annotationdbi. 159s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 159s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 159s Selecting previously unselected package r-bioc-genomicranges. 159s Preparing to unpack .../187-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 159s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 159s Selecting previously unselected package r-cran-lazyeval. 159s Preparing to unpack .../188-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 159s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 159s Selecting previously unselected package r-bioc-annotationfilter. 159s Preparing to unpack .../189-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 159s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 159s Selecting previously unselected package r-cran-generics. 159s Preparing to unpack .../190-r-cran-generics_0.1.3-1_all.deb ... 159s Unpacking r-cran-generics (0.1.3-1) ... 159s Selecting previously unselected package r-cran-magrittr. 160s Preparing to unpack .../191-r-cran-magrittr_2.0.3-1_arm64.deb ... 160s Unpacking r-cran-magrittr (2.0.3-1) ... 160s Selecting previously unselected package r-cran-fansi. 160s Preparing to unpack .../192-r-cran-fansi_1.0.5-1_arm64.deb ... 160s Unpacking r-cran-fansi (1.0.5-1) ... 160s Selecting previously unselected package r-cran-utf8. 160s Preparing to unpack .../193-r-cran-utf8_1.2.4-1_arm64.deb ... 160s Unpacking r-cran-utf8 (1.2.4-1) ... 160s Selecting previously unselected package r-cran-pillar. 160s Preparing to unpack .../194-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 160s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 160s Selecting previously unselected package r-cran-tibble. 160s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 160s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 160s Selecting previously unselected package r-cran-withr. 160s Preparing to unpack .../196-r-cran-withr_2.5.0-1_all.deb ... 160s Unpacking r-cran-withr (2.5.0-1) ... 160s Selecting previously unselected package r-cran-tidyselect. 160s Preparing to unpack .../197-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 160s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 160s Selecting previously unselected package r-cran-dplyr. 160s Preparing to unpack .../198-r-cran-dplyr_1.1.4-1_arm64.deb ... 160s Unpacking r-cran-dplyr (1.1.4-1) ... 160s Selecting previously unselected package r-cran-purrr. 160s Preparing to unpack .../199-r-cran-purrr_1.0.2-1_arm64.deb ... 160s Unpacking r-cran-purrr (1.0.2-1) ... 160s Selecting previously unselected package r-cran-stringi. 160s Preparing to unpack .../200-r-cran-stringi_1.8.3-1_arm64.deb ... 160s Unpacking r-cran-stringi (1.8.3-1) ... 160s Selecting previously unselected package r-cran-stringr. 160s Preparing to unpack .../201-r-cran-stringr_1.5.1-1_all.deb ... 160s Unpacking r-cran-stringr (1.5.1-1) ... 160s Selecting previously unselected package r-cran-tidyr. 160s Preparing to unpack .../202-r-cran-tidyr_1.3.1-1_arm64.deb ... 160s Unpacking r-cran-tidyr (1.3.1-1) ... 160s Selecting previously unselected package r-cran-dbplyr. 160s Preparing to unpack .../203-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 160s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 160s Selecting previously unselected package r-cran-filelock. 160s Preparing to unpack .../204-r-cran-filelock_1.0.3-1_arm64.deb ... 160s Unpacking r-cran-filelock (1.0.3-1) ... 160s Selecting previously unselected package r-bioc-biocfilecache. 160s Preparing to unpack .../205-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 160s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 160s Selecting previously unselected package r-bioc-biocio. 160s Preparing to unpack .../206-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 160s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 160s Selecting previously unselected package r-cran-formatr. 160s Preparing to unpack .../207-r-cran-formatr_1.14-1_all.deb ... 160s Unpacking r-cran-formatr (1.14-1) ... 160s Selecting previously unselected package r-cran-lambda.r. 160s Preparing to unpack .../208-r-cran-lambda.r_1.2.4-2build1_all.deb ... 160s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 160s Selecting previously unselected package r-cran-futile.options. 160s Preparing to unpack .../209-r-cran-futile.options_1.0.1-3build1_all.deb ... 160s Unpacking r-cran-futile.options (1.0.1-3build1) ... 160s Selecting previously unselected package r-cran-futile.logger. 161s Preparing to unpack .../210-r-cran-futile.logger_1.4.3-4build1_all.deb ... 161s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 161s Selecting previously unselected package r-cran-snow. 161s Preparing to unpack .../211-r-cran-snow_1%3a0.4.4-2_all.deb ... 161s Unpacking r-cran-snow (1:0.4.4-2) ... 161s Selecting previously unselected package r-cran-codetools. 161s Preparing to unpack .../212-r-cran-codetools_0.2-19-1_all.deb ... 161s Unpacking r-cran-codetools (0.2-19-1) ... 161s Selecting previously unselected package r-cran-bh. 161s Preparing to unpack .../213-r-cran-bh_1.84.0-1_all.deb ... 161s Unpacking r-cran-bh (1.84.0-1) ... 161s Selecting previously unselected package r-bioc-biocparallel. 161s Preparing to unpack .../214-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 161s Unpacking r-bioc-biocparallel (1.36.0-1) ... 161s Selecting previously unselected package r-cran-base64enc. 161s Preparing to unpack .../215-r-cran-base64enc_0.1-3-3_arm64.deb ... 161s Unpacking r-cran-base64enc (0.1-3-3) ... 161s Selecting previously unselected package r-cran-digest. 161s Preparing to unpack .../216-r-cran-digest_0.6.34-1_arm64.deb ... 161s Unpacking r-cran-digest (0.6.34-1) ... 161s Selecting previously unselected package r-cran-ellipsis. 161s Preparing to unpack .../217-r-cran-ellipsis_0.3.2-2_arm64.deb ... 161s Unpacking r-cran-ellipsis (0.3.2-2) ... 161s Selecting previously unselected package r-cran-htmltools. 161s Preparing to unpack .../218-r-cran-htmltools_0.5.7-1_arm64.deb ... 161s Unpacking r-cran-htmltools (0.5.7-1) ... 161s Selecting previously unselected package r-cran-evaluate. 161s Preparing to unpack .../219-r-cran-evaluate_0.23-1_all.deb ... 161s Unpacking r-cran-evaluate (0.23-1) ... 161s Selecting previously unselected package r-cran-xfun. 161s Preparing to unpack .../220-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 161s Unpacking r-cran-xfun (0.41+dfsg-1) ... 161s Selecting previously unselected package r-cran-highr. 161s Preparing to unpack .../221-r-cran-highr_0.10+dfsg-1_all.deb ... 161s Unpacking r-cran-highr (0.10+dfsg-1) ... 161s Selecting previously unselected package r-cran-yaml. 161s Preparing to unpack .../222-r-cran-yaml_2.3.8-1_arm64.deb ... 161s Unpacking r-cran-yaml (2.3.8-1) ... 161s Selecting previously unselected package libjs-mathjax. 162s Preparing to unpack .../223-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 162s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 162s Selecting previously unselected package r-cran-knitr. 162s Preparing to unpack .../224-r-cran-knitr_1.45+dfsg-1_all.deb ... 162s Unpacking r-cran-knitr (1.45+dfsg-1) ... 162s Selecting previously unselected package r-cran-jquerylib. 162s Preparing to unpack .../225-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 162s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 162s Selecting previously unselected package r-cran-fs. 162s Preparing to unpack .../226-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 162s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 162s Selecting previously unselected package r-cran-rappdirs. 162s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_arm64.deb ... 162s Unpacking r-cran-rappdirs (0.3.3-1) ... 162s Selecting previously unselected package r-cran-sass. 162s Preparing to unpack .../228-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 162s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 162s Selecting previously unselected package r-cran-bslib. 162s Preparing to unpack .../229-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 162s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 163s Selecting previously unselected package r-cran-fontawesome. 163s Preparing to unpack .../230-r-cran-fontawesome_0.5.2-1_all.deb ... 163s Unpacking r-cran-fontawesome (0.5.2-1) ... 163s Selecting previously unselected package r-cran-tinytex. 163s Preparing to unpack .../231-r-cran-tinytex_0.49-1_all.deb ... 163s Unpacking r-cran-tinytex (0.49-1) ... 163s Selecting previously unselected package libjs-modernizr. 163s Preparing to unpack .../232-libjs-modernizr_2.6.2+ds1-5_all.deb ... 163s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 163s Selecting previously unselected package r-cran-littler. 163s Preparing to unpack .../233-r-cran-littler_0.3.19-1_arm64.deb ... 163s Unpacking r-cran-littler (0.3.19-1) ... 163s Selecting previously unselected package r-cran-pkgkitten. 163s Preparing to unpack .../234-r-cran-pkgkitten_0.2.3-1_all.deb ... 163s Unpacking r-cran-pkgkitten (0.2.3-1) ... 163s Selecting previously unselected package r-cran-rcpp. 163s Preparing to unpack .../235-r-cran-rcpp_1.0.12-1_arm64.deb ... 163s Unpacking r-cran-rcpp (1.0.12-1) ... 163s Selecting previously unselected package r-cran-later. 163s Preparing to unpack .../236-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 163s Unpacking r-cran-later (1.3.2+dfsg-1) ... 163s Selecting previously unselected package r-cran-promises. 163s Preparing to unpack .../237-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 163s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 163s Selecting previously unselected package r-cran-httpuv. 163s Preparing to unpack .../238-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 163s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 163s Selecting previously unselected package r-cran-xtable. 164s Preparing to unpack .../239-r-cran-xtable_1%3a1.8-4-2_all.deb ... 164s Unpacking r-cran-xtable (1:1.8-4-2) ... 164s Selecting previously unselected package r-cran-sourcetools. 164s Preparing to unpack .../240-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 164s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 164s Selecting previously unselected package r-cran-commonmark. 164s Preparing to unpack .../241-r-cran-commonmark_1.9.1-1_arm64.deb ... 164s Unpacking r-cran-commonmark (1.9.1-1) ... 164s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 164s Preparing to unpack .../242-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 164s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 164s Selecting previously unselected package r-cran-shiny. 164s Preparing to unpack .../243-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 164s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 164s Selecting previously unselected package r-cran-rmarkdown. 164s Preparing to unpack .../244-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 164s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 164s Selecting previously unselected package r-cran-bookdown. 164s Preparing to unpack .../245-r-cran-bookdown_0.37+dfsg-1_all.deb ... 164s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 164s Selecting previously unselected package r-cran-biocmanager. 164s Preparing to unpack .../246-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 164s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 164s Selecting previously unselected package tex-common. 165s Preparing to unpack .../247-tex-common_6.18_all.deb ... 165s Unpacking tex-common (6.18) ... 165s Selecting previously unselected package t1utils. 165s Preparing to unpack .../248-t1utils_1.41-4build2_arm64.deb ... 165s Unpacking t1utils (1.41-4build2) ... 165s Selecting previously unselected package texlive-binaries. 165s Preparing to unpack .../249-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 165s Unpacking texlive-binaries (2023.20230311.66589-9) ... 165s Selecting previously unselected package texlive-base. 165s Preparing to unpack .../250-texlive-base_2023.20240207-1_all.deb ... 165s Unpacking texlive-base (2023.20240207-1) ... 166s Selecting previously unselected package texlive-latex-base. 166s Preparing to unpack .../251-texlive-latex-base_2023.20240207-1_all.deb ... 166s Unpacking texlive-latex-base (2023.20240207-1) ... 166s Selecting previously unselected package texlive-bibtex-extra. 166s Preparing to unpack .../252-texlive-bibtex-extra_2023.20240207-1_all.deb ... 166s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 169s Selecting previously unselected package r-bioc-biocstyle. 169s Preparing to unpack .../253-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 169s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 169s Selecting previously unselected package r-cran-xml. 169s Preparing to unpack .../254-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 169s Unpacking r-cran-xml (3.99-0.16.1-1) ... 169s Selecting previously unselected package r-cran-hms. 169s Preparing to unpack .../255-r-cran-hms_1.1.3-1_all.deb ... 169s Unpacking r-cran-hms (1.1.3-1) ... 169s Selecting previously unselected package r-cran-prettyunits. 169s Preparing to unpack .../256-r-cran-prettyunits_1.2.0-1_all.deb ... 169s Unpacking r-cran-prettyunits (1.2.0-1) ... 169s Selecting previously unselected package r-cran-progress. 169s Preparing to unpack .../257-r-cran-progress_1.2.3-1_all.deb ... 169s Unpacking r-cran-progress (1.2.3-1) ... 169s Selecting previously unselected package r-cran-xml2. 169s Preparing to unpack .../258-r-cran-xml2_1.3.6-1_arm64.deb ... 169s Unpacking r-cran-xml2 (1.3.6-1) ... 169s Selecting previously unselected package r-bioc-biomart. 169s Preparing to unpack .../259-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 169s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 169s Selecting previously unselected package r-cran-farver. 169s Preparing to unpack .../260-r-cran-farver_2.1.1-1_arm64.deb ... 169s Unpacking r-cran-farver (2.1.1-1) ... 169s Selecting previously unselected package r-cran-labeling. 169s Preparing to unpack .../261-r-cran-labeling_0.4.3-1_all.deb ... 169s Unpacking r-cran-labeling (0.4.3-1) ... 169s Selecting previously unselected package r-cran-colorspace. 170s Preparing to unpack .../262-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 170s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 170s Selecting previously unselected package r-cran-munsell. 170s Preparing to unpack .../263-r-cran-munsell_0.5.0-2build1_all.deb ... 170s Unpacking r-cran-munsell (0.5.0-2build1) ... 170s Selecting previously unselected package r-cran-rcolorbrewer. 170s Preparing to unpack .../264-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 170s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 170s Selecting previously unselected package r-cran-viridislite. 170s Preparing to unpack .../265-r-cran-viridislite_0.4.2-2_all.deb ... 170s Unpacking r-cran-viridislite (0.4.2-2) ... 170s Selecting previously unselected package r-cran-scales. 170s Preparing to unpack .../266-r-cran-scales_1.3.0-1_all.deb ... 170s Unpacking r-cran-scales (1.3.0-1) ... 170s Selecting previously unselected package r-cran-gtable. 170s Preparing to unpack .../267-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 170s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 170s Selecting previously unselected package r-cran-isoband. 170s Preparing to unpack .../268-r-cran-isoband_0.2.7-1_arm64.deb ... 170s Unpacking r-cran-isoband (0.2.7-1) ... 170s Selecting previously unselected package r-cran-mass. 170s Preparing to unpack .../269-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 170s Unpacking r-cran-mass (7.3-60.0.1-1) ... 170s Selecting previously unselected package r-cran-lattice. 170s Preparing to unpack .../270-r-cran-lattice_0.22-5-1_arm64.deb ... 170s Unpacking r-cran-lattice (0.22-5-1) ... 170s Selecting previously unselected package r-cran-nlme. 170s Preparing to unpack .../271-r-cran-nlme_3.1.164-1_arm64.deb ... 170s Unpacking r-cran-nlme (3.1.164-1) ... 170s Selecting previously unselected package r-cran-matrix. 170s Preparing to unpack .../272-r-cran-matrix_1.6-5-1_arm64.deb ... 170s Unpacking r-cran-matrix (1.6-5-1) ... 170s Selecting previously unselected package r-cran-mgcv. 170s Preparing to unpack .../273-r-cran-mgcv_1.9-1-1_arm64.deb ... 170s Unpacking r-cran-mgcv (1.9-1-1) ... 170s Selecting previously unselected package r-cran-ggplot2. 170s Preparing to unpack .../274-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 170s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 170s Selecting previously unselected package r-cran-cluster. 171s Preparing to unpack .../275-r-cran-cluster_2.1.6-1_arm64.deb ... 171s Unpacking r-cran-cluster (2.1.6-1) ... 171s Selecting previously unselected package r-cran-survival. 171s Preparing to unpack .../276-r-cran-survival_3.5-8-1_arm64.deb ... 171s Unpacking r-cran-survival (3.5-8-1) ... 171s Selecting previously unselected package r-cran-rpart. 171s Preparing to unpack .../277-r-cran-rpart_4.1.23-1_arm64.deb ... 171s Unpacking r-cran-rpart (4.1.23-1) ... 171s Selecting previously unselected package r-cran-nnet. 171s Preparing to unpack .../278-r-cran-nnet_7.3-19-2_arm64.deb ... 171s Unpacking r-cran-nnet (7.3-19-2) ... 171s Selecting previously unselected package r-cran-foreign. 171s Preparing to unpack .../279-r-cran-foreign_0.8.86-1_arm64.deb ... 171s Unpacking r-cran-foreign (0.8.86-1) ... 171s Selecting previously unselected package r-cran-gridextra. 171s Preparing to unpack .../280-r-cran-gridextra_2.3-3build1_all.deb ... 171s Unpacking r-cran-gridextra (2.3-3build1) ... 171s Selecting previously unselected package r-cran-data.table. 171s Preparing to unpack .../281-r-cran-data.table_1.14.10+dfsg-1_arm64.deb ... 171s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 171s Selecting previously unselected package r-cran-backports. 171s Preparing to unpack .../282-r-cran-backports_1.4.1-1_arm64.deb ... 171s Unpacking r-cran-backports (1.4.1-1) ... 171s Selecting previously unselected package r-cran-checkmate. 171s Preparing to unpack .../283-r-cran-checkmate_2.3.1-1_arm64.deb ... 171s Unpacking r-cran-checkmate (2.3.1-1) ... 171s Selecting previously unselected package r-cran-htmlwidgets. 171s Preparing to unpack .../284-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 171s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 171s Selecting previously unselected package r-cran-rstudioapi. 171s Preparing to unpack .../285-r-cran-rstudioapi_0.15.0-1_all.deb ... 171s Unpacking r-cran-rstudioapi (0.15.0-1) ... 172s Selecting previously unselected package r-cran-htmltable. 172s Preparing to unpack .../286-r-cran-htmltable_2.4.2-1_all.deb ... 172s Unpacking r-cran-htmltable (2.4.2-1) ... 172s Selecting previously unselected package r-cran-viridis. 172s Preparing to unpack .../287-r-cran-viridis_0.6.5-1_all.deb ... 172s Unpacking r-cran-viridis (0.6.5-1) ... 172s Selecting previously unselected package r-cran-formula. 172s Preparing to unpack .../288-r-cran-formula_1.2-5-1_all.deb ... 172s Unpacking r-cran-formula (1.2-5-1) ... 172s Selecting previously unselected package r-cran-chron. 172s Preparing to unpack .../289-r-cran-chron_2.3-61-2_arm64.deb ... 172s Unpacking r-cran-chron (2.3-61-2) ... 172s Selecting previously unselected package r-cran-jpeg. 172s Preparing to unpack .../290-r-cran-jpeg_0.1-10-1_arm64.deb ... 172s Unpacking r-cran-jpeg (0.1-10-1) ... 172s Selecting previously unselected package r-cran-deldir. 172s Preparing to unpack .../291-r-cran-deldir_2.0-4-1_arm64.deb ... 172s Unpacking r-cran-deldir (2.0-4-1) ... 172s Selecting previously unselected package r-cran-rcppeigen. 172s Preparing to unpack .../292-r-cran-rcppeigen_0.3.3.9.4-1_arm64.deb ... 172s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 173s Selecting previously unselected package r-cran-interp. 175s Preparing to unpack .../293-r-cran-interp_1.1-6-1_arm64.deb ... 175s Unpacking r-cran-interp (1.1-6-1) ... 175s Selecting previously unselected package r-cran-latticeextra. 175s Preparing to unpack .../294-r-cran-latticeextra_0.6-30-1_all.deb ... 175s Unpacking r-cran-latticeextra (0.6-30-1) ... 175s Selecting previously unselected package r-cran-acepack. 175s Preparing to unpack .../295-r-cran-acepack_1.4.2-1_arm64.deb ... 175s Unpacking r-cran-acepack (1.4.2-1) ... 175s Selecting previously unselected package r-cran-hmisc. 175s Preparing to unpack .../296-r-cran-hmisc_5.1-1-1_arm64.deb ... 175s Unpacking r-cran-hmisc (5.1-1-1) ... 175s Selecting previously unselected package r-cran-dichromat. 175s Preparing to unpack .../297-r-cran-dichromat_1%3a2.0-0.1-1_all.deb ... 175s Unpacking r-cran-dichromat (1:2.0-0.1-1) ... 175s Selecting previously unselected package r-cran-matrixstats. 175s Preparing to unpack .../298-r-cran-matrixstats_1.2.0-1_arm64.deb ... 175s Unpacking r-cran-matrixstats (1.2.0-1) ... 175s Selecting previously unselected package r-bioc-matrixgenerics. 175s Preparing to unpack .../299-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 175s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 175s Selecting previously unselected package r-cran-abind. 175s Preparing to unpack .../300-r-cran-abind_1.4-5-2_all.deb ... 175s Unpacking r-cran-abind (1.4-5-2) ... 175s Selecting previously unselected package r-bioc-s4arrays. 175s Preparing to unpack .../301-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 175s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 175s Selecting previously unselected package r-bioc-sparsearray. 175s Preparing to unpack .../302-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 175s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 176s Selecting previously unselected package r-bioc-delayedarray. 176s Preparing to unpack .../303-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 176s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 176s Selecting previously unselected package r-bioc-summarizedexperiment. 176s Preparing to unpack .../304-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 176s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 176s Selecting previously unselected package r-bioc-rhtslib. 176s Preparing to unpack .../305-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 176s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 176s Selecting previously unselected package r-bioc-rsamtools. 176s Preparing to unpack .../306-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 176s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 176s Selecting previously unselected package r-bioc-genomicalignments. 176s Preparing to unpack .../307-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 176s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 176s Selecting previously unselected package r-cran-rjson. 176s Preparing to unpack .../308-r-cran-rjson_0.2.21-1_arm64.deb ... 176s Unpacking r-cran-rjson (0.2.21-1) ... 176s Selecting previously unselected package r-cran-restfulr. 176s Preparing to unpack .../309-r-cran-restfulr_0.0.15-1_arm64.deb ... 176s Unpacking r-cran-restfulr (0.0.15-1) ... 176s Selecting previously unselected package r-bioc-rtracklayer. 176s Preparing to unpack .../310-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 176s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 176s Selecting previously unselected package r-bioc-genomicfeatures. 176s Preparing to unpack .../311-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 176s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 177s Selecting previously unselected package r-bioc-bsgenome. 177s Preparing to unpack .../312-r-bioc-bsgenome_1.70.2-1_all.deb ... 177s Unpacking r-bioc-bsgenome (1.70.2-1) ... 177s Selecting previously unselected package r-bioc-variantannotation. 177s Preparing to unpack .../313-r-bioc-variantannotation_1.48.1-1_arm64.deb ... 177s Unpacking r-bioc-variantannotation (1.48.1-1) ... 177s Selecting previously unselected package r-bioc-protgenerics. 177s Preparing to unpack .../314-r-bioc-protgenerics_1.34.0-1_all.deb ... 177s Unpacking r-bioc-protgenerics (1.34.0-1) ... 177s Selecting previously unselected package r-bioc-ensembldb. 177s Preparing to unpack .../315-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 177s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 177s Selecting previously unselected package r-bioc-biovizbase. 177s Preparing to unpack .../316-r-bioc-biovizbase_1.50.0-1_arm64.deb ... 177s Unpacking r-bioc-biovizbase (1.50.0-1) ... 177s Selecting previously unselected package r-bioc-gviz. 177s Preparing to unpack .../317-r-bioc-gviz_1.46.1+dfsg-1_all.deb ... 177s Unpacking r-bioc-gviz (1.46.1+dfsg-1) ... 177s Selecting previously unselected package r-cran-brio. 177s Preparing to unpack .../318-r-cran-brio_1.1.4-1_arm64.deb ... 177s Unpacking r-cran-brio (1.1.4-1) ... 177s Selecting previously unselected package r-cran-ps. 177s Preparing to unpack .../319-r-cran-ps_1.7.6-1_arm64.deb ... 177s Unpacking r-cran-ps (1.7.6-1) ... 177s Selecting previously unselected package r-cran-processx. 177s Preparing to unpack .../320-r-cran-processx_3.8.3-1_arm64.deb ... 177s Unpacking r-cran-processx (3.8.3-1) ... 177s Selecting previously unselected package r-cran-callr. 177s Preparing to unpack .../321-r-cran-callr_3.7.3-2_all.deb ... 177s Unpacking r-cran-callr (3.7.3-2) ... 177s Selecting previously unselected package r-cran-desc. 177s Preparing to unpack .../322-r-cran-desc_1.4.3-1_all.deb ... 177s Unpacking r-cran-desc (1.4.3-1) ... 177s Selecting previously unselected package r-cran-diffobj. 177s Preparing to unpack .../323-r-cran-diffobj_0.3.5-1_arm64.deb ... 177s Unpacking r-cran-diffobj (0.3.5-1) ... 177s Selecting previously unselected package r-cran-pkgbuild. 177s Preparing to unpack .../324-r-cran-pkgbuild_1.4.3-1_all.deb ... 177s Unpacking r-cran-pkgbuild (1.4.3-1) ... 178s Selecting previously unselected package r-cran-rprojroot. 178s Preparing to unpack .../325-r-cran-rprojroot_2.0.4-1_all.deb ... 178s Unpacking r-cran-rprojroot (2.0.4-1) ... 178s Selecting previously unselected package r-cran-pkgload. 178s Preparing to unpack .../326-r-cran-pkgload_1.3.4-1_all.deb ... 178s Unpacking r-cran-pkgload (1.3.4-1) ... 178s Selecting previously unselected package r-cran-praise. 178s Preparing to unpack .../327-r-cran-praise_1.0.0-4build1_all.deb ... 178s Unpacking r-cran-praise (1.0.0-4build1) ... 178s Selecting previously unselected package r-cran-rematch2. 178s Preparing to unpack .../328-r-cran-rematch2_2.1.2-2build1_all.deb ... 178s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 178s Selecting previously unselected package r-cran-waldo. 178s Preparing to unpack .../329-r-cran-waldo_0.5.2-1build1_all.deb ... 178s Unpacking r-cran-waldo (0.5.2-1build1) ... 178s Selecting previously unselected package r-cran-testthat. 178s Preparing to unpack .../330-r-cran-testthat_3.2.1-1_arm64.deb ... 178s Unpacking r-cran-testthat (3.2.1-1) ... 178s Selecting previously unselected package autopkgtest-satdep. 178s Preparing to unpack .../331-1-autopkgtest-satdep.deb ... 178s Unpacking autopkgtest-satdep (0) ... 178s Setting up libjs-json (0~20221030+~1.0.8-1) ... 178s Setting up javascript-common (11+nmu1) ... 178s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 178s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 178s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 178s Setting up libpaper1:arm64 (1.1.29) ... 178s 178s Creating config file /etc/papersize with new version 178s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 178s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 178s Setting up libxpm4:arm64 (1:3.5.17-1) ... 178s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 178s Setting up libxi6:arm64 (2:1.8.1-1) ... 178s Setting 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180s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 180s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 180s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 180s Setting up libblas-dev:arm64 (3.12.0-3) ... 180s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 180s Setting up dctrl-tools (2.24-3build2) ... 180s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 180s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 180s Setting up libsynctex2:arm64 (2023.20230311.66589-9) ... 180s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 180s Setting up libpotrace0:arm64 (1.16-2) ... 180s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 180s Setting up libice6:arm64 (2:1.0.10-1build2) ... 180s Setting up liblapack3:arm64 (3.12.0-3) ... 180s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide 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up pkg-config:arm64 (1.8.1-2) ... 180s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 180s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 180s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 180s Setting up curl (8.5.0-2ubuntu7) ... 180s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 180s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 180s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 180s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 180s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 180s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 180s Setting up fontconfig (2.15.0-1ubuntu1) ... 182s Regenerating fonts cache... done. 182s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 182s Setting up libxft2:arm64 (2.3.6-1) ... 182s Setting up libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 182s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 182s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 182s Setting up cpp-13 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update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 183s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 183s Setting up r-cran-cluster (2.1.6-1) ... 183s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 183s Setting up r-cran-nnet (7.3-19-2) ... 183s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 183s Setting up r-cran-lazyeval (0.2.2-1build1) ... 183s Setting up r-cran-commonmark (1.9.1-1) ... 183s Setting up r-cran-r6 (2.5.1-1) ... 183s Setting up r-cran-pkgkitten (0.2.3-1) ... 183s Setting up r-cran-jpeg (0.1-10-1) ... 183s Setting up r-cran-chron (2.3-61-2) ... 183s Setting up texlive-base (2023.20240207-1) ... 183s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 183s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 184s tl-paper: setting paper size for xdvi to a4: 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up r-bioc-rtracklayer (1.62.0-1) ... 185s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 185s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 185s Setting up r-bioc-bsgenome (1.70.2-1) ... 185s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 185s Setting up r-bioc-ensembldb (2.26.0+dfsg-1) ... 185s Setting up r-bioc-variantannotation (1.48.1-1) ... 185s Setting up r-cran-htmltable (2.4.2-1) ... 185s Setting up r-cran-hmisc (5.1-1-1) ... 185s Setting up r-bioc-biovizbase (1.50.0-1) ... 185s Setting up r-bioc-gviz (1.46.1+dfsg-1) ... 185s Setting up autopkgtest-satdep (0) ... 185s Processing triggers for man-db (2.12.0-3) ... 186s Processing triggers for install-info (7.1-3) ... 186s Processing triggers for libc-bin (2.39-0ubuntu2) ... 186s Processing triggers for tex-common (6.18) ... 186s Running updmap-sys. This may take some time... done. 186s Running mktexlsr /var/lib/texmf ... done. 186s Building format(s) --all. 230s This may take some time... done. 247s (Reading database ... 129359 files and directories currently installed.) 247s Removing autopkgtest-satdep (0) ... 247s autopkgtest [17:38:16]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 247s autopkgtest [17:38:16]: test pkg-r-autopkgtest: [----------------------- 248s Test: Try to load the R library Gviz 248s 248s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 248s Copyright (C) 2024 The R Foundation for Statistical Computing 248s Platform: aarch64-unknown-linux-gnu (64-bit) 248s 248s R is free software and comes with ABSOLUTELY NO WARRANTY. 248s You are welcome to redistribute it under certain conditions. 248s Type 'license()' or 'licence()' for distribution details. 248s 248s R is a collaborative project with many contributors. 248s Type 'contributors()' for more information and 248s 'citation()' on how to cite R or R packages in publications. 248s 248s Type 'demo()' for some demos, 'help()' for on-line help, or 248s 'help.start()' for an HTML browser interface to help. 248s Type 'q()' to quit R. 248s 248s > library('Gviz') 248s Loading required package: S4Vectors 248s Loading required package: stats4 248s Loading required package: BiocGenerics 249s 249s Attaching package: ‘BiocGenerics’ 249s 249s The following objects are masked from ‘package:stats’: 249s 249s IQR, mad, sd, var, xtabs 249s 249s The following objects are masked from ‘package:base’: 249s 249s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 249s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 249s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 249s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 249s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 249s table, tapply, union, unique, unsplit, which.max, which.min 249s 249s 249s Attaching package: ‘S4Vectors’ 249s 249s The following object is masked from ‘package:utils’: 249s 249s findMatches 249s 249s The following objects are masked from ‘package:base’: 249s 249s expand.grid, I, unname 249s 249s Loading required package: IRanges 250s Loading required package: GenomicRanges 250s Loading required package: GenomeInfoDb 251s Loading required package: grid 263s > 263s > 263s Other tests are currently unsupported! 263s They will be progressively added. 263s autopkgtest [17:38:32]: test pkg-r-autopkgtest: -----------------------] 264s autopkgtest [17:38:33]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 264s pkg-r-autopkgtest PASS 264s autopkgtest [17:38:33]: @@@@@@@@@@@@@@@@@@@@ summary 264s pkg-r-autopkgtest PASS 276s Creating nova instance adt-noble-arm64-r-bioc-gviz-20240316-173409-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...