0s autopkgtest [17:31:47]: starting date and time: 2024-03-16 17:31:47+0000 0s autopkgtest [17:31:47]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:31:47]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ukqy0i7t/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-ggbio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-19.secgroup --name adt-noble-arm64-r-bioc-ggbio-20240316-173147-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 177s autopkgtest [17:34:44]: testbed dpkg architecture: arm64 177s autopkgtest [17:34:44]: testbed apt version: 2.7.12 177s autopkgtest [17:34:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup 178s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 178s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 178s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 179s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 179s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 179s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 179s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 179s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 179s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 179s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 179s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 179s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 179s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 181s Fetched 9060 kB in 2s (5233 kB/s) 182s Reading package lists... 184s Reading package lists... 185s Building dependency tree... 185s Reading state information... 185s Calculating upgrade... 186s The following packages will be REMOVED: 186s libglib2.0-0 libssl3 186s The following NEW packages will be installed: 186s libglib2.0-0t64 libssl3t64 xdg-user-dirs 186s The following packages have been kept back: 186s curl 186s The following packages will be upgraded: 186s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 186s ubuntu-minimal ubuntu-standard 186s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 186s Need to get 4613 kB of archives. 186s After this operation, 211 kB of additional disk space will be used. 186s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 186s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 186s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 186s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 186s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 186s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 186s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 186s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 186s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 186s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 187s Fetched 4613 kB in 1s (5509 kB/s) 187s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 187s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 187s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 187s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 187s udisks2 depends on libglib2.0-0 (>= 2.77.0). 187s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 187s python3-gi depends on libglib2.0-0 (>= 2.77.0). 187s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 187s netplan.io depends on libglib2.0-0 (>= 2.70.0). 187s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 187s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 187s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 187s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 187s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 187s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 187s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 187s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 187s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 187s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 187s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 187s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 187s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 187s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 187s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 187s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 187s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 187s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 187s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 187s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 187s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 187s fwupd depends on libglib2.0-0 (>= 2.79.0). 187s bolt depends on libglib2.0-0 (>= 2.56.0). 187s 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 188s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 188s Selecting previously unselected package libglib2.0-0t64:arm64. 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 188s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 188s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 188s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 188s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 188s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 188s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 188s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 188s wget depends on libssl3 (>= 3.0.0). 188s u-boot-tools depends on libssl3 (>= 3.0.0). 188s tnftp depends on libssl3 (>= 3.0.0). 188s tcpdump depends on libssl3 (>= 3.0.0). 188s systemd-resolved depends on libssl3 (>= 3.0.0). 188s systemd depends on libssl3 (>= 3.0.0). 188s sudo depends on libssl3 (>= 3.0.0). 188s sbsigntool depends on libssl3 (>= 3.0.0). 188s rsync depends on libssl3 (>= 3.0.0). 188s python3-cryptography depends on libssl3 (>= 3.0.0). 188s openssh-server depends on libssl3 (>= 3.0.10). 188s openssh-client depends on libssl3 (>= 3.0.10). 188s mtd-utils depends on libssl3 (>= 3.0.0). 188s mokutil depends on libssl3 (>= 3.0.0). 188s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 188s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 188s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 188s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 188s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 188s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 188s libnvme1 depends on libssl3 (>= 3.0.0). 188s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 188s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 188s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 188s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 188s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 188s kmod depends on libssl3 (>= 3.0.0). 188s dhcpcd-base depends on libssl3 (>= 3.0.0). 188s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 188s 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 188s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 188s Selecting previously unselected package libssl3t64:arm64. 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 188s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 188s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 188s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 188s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 188s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 188s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 188s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 188s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 188s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 188s Unpacking ubuntu-minimal (1.536) over (1.535) ... 188s Selecting previously unselected package xdg-user-dirs. 188s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 188s Unpacking xdg-user-dirs (0.18-1) ... 188s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 188s Unpacking ubuntu-standard (1.536) over (1.535) ... 188s Setting up ubuntu-minimal (1.536) ... 188s Setting up xdg-user-dirs (0.18-1) ... 188s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 188s Setting up libtirpc-common (1.3.4+ds-1.1) ... 188s Setting up ubuntu-standard (1.536) ... 188s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 188s No schema files found: doing nothing. 188s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 188s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 188s Setting up openssl (3.0.13-0ubuntu1) ... 188s Setting up readline-common (8.2-3.1) ... 188s Processing triggers for man-db (2.12.0-3) ... 189s Processing triggers for install-info (7.1-3) ... 189s Processing triggers for libc-bin (2.39-0ubuntu2) ... 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 190s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 191s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 191s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 191s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 191s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 193s Reading package lists... 193s Reading package lists... 194s Building dependency tree... 194s Reading state information... 194s Calculating upgrade... 194s The following packages have been kept back: 194s curl 195s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 195s Reading package lists... 195s Building dependency tree... 195s Reading state information... 196s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 198s autopkgtest [17:35:05]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 199s autopkgtest [17:35:06]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-ggbio 201s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (dsc) [2564 B] 201s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (tar) [3252 kB] 201s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (diff) [5428 B] 201s gpgv: Signature made Fri Dec 8 14:52:19 2023 UTC 201s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 201s gpgv: issuer "tille@debian.org" 201s gpgv: Can't check signature: No public key 201s dpkg-source: warning: cannot verify inline signature for ./r-bioc-ggbio_1.50.0-1.dsc: no acceptable signature found 202s autopkgtest [17:35:09]: testing package r-bioc-ggbio version 1.50.0-1 202s autopkgtest [17:35:09]: build not needed 204s autopkgtest [17:35:11]: test pkg-r-autopkgtest: preparing testbed 205s Reading package lists... 205s Building dependency tree... 205s Reading state information... 206s Starting pkgProblemResolver with broken count: 0 206s Starting 2 pkgProblemResolver with broken count: 0 206s Done 207s The following additional packages will be installed: 207s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 207s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 207s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 207s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 207s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 207s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 207s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 207s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libboost-dev 207s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 207s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 207s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 207s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 207s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 207s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 207s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 207s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 207s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 207s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 207s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 207s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 207s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 207s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 207s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 207s libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 207s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 207s libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 207s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 207s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 207s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 207s pkgconf-bin r-base-core r-base-dev r-bioc-annotationdbi 207s r-bioc-annotationfilter r-bioc-biobase r-bioc-biocfilecache 207s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 207s r-bioc-biomart r-bioc-biostrings r-bioc-biovizbase r-bioc-bsgenome 207s r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 207s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 207s r-bioc-genomicranges r-bioc-ggbio r-bioc-graph r-bioc-iranges 207s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi r-bioc-protgenerics 207s r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 207s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 207s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 207s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 207s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 207s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 207s r-cran-broom.helpers r-cran-bslib r-cran-cachem r-cran-callr 207s r-cran-checkmate r-cran-chron r-cran-cli r-cran-clipr r-cran-cluster 207s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 207s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 207s r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj r-cran-digest 207s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 207s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-forcats 207s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 207s r-cran-futile.options r-cran-generics r-cran-ggally r-cran-ggplot2 207s r-cran-ggstats r-cran-glue r-cran-gridextra r-cran-gtable r-cran-haven 207s r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable r-cran-htmltools 207s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-interp r-cran-isoband 207s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 207s r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice 207s r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle r-cran-littler 207s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 207s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 207s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 207s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 207s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 207s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 207s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl r-cran-readr 207s r-cran-rematch2 r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 207s r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 207s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 207s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 207s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 207s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite 207s r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 207s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 207s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 207s xdg-utils zip zlib1g-dev 207s Suggested packages: 207s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 207s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 207s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 207s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 207s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 207s libboost-context1.83-dev libboost-contract1.83-dev 207s libboost-coroutine1.83-dev libboost-date-time1.83-dev 207s libboost-exception1.83-dev libboost-fiber1.83-dev 207s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 207s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 207s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 207s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 207s libboost-numpy1.83-dev libboost-program-options1.83-dev 207s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 207s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 207s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 207s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 207s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 207s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 207s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 207s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 207s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 207s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 207s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 207s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 207s r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db r-bioc-all r-bioc-affy 207s r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 207s r-bioc-shortread r-cran-batchtools r-cran-mockery r-cran-webmockr 207s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 207s r-bioc-gviz r-bioc-annotationhub r-cran-r.utils r-bioc-edger r-cran-markdown 207s r-bioc-dexseq r-cran-sparsem r-bioc-sparsematrixstats r-bioc-limma 207s r-bioc-rhdf5 r-bioc-snpstats r-cran-roxygen2 r-cran-ff r-cran-covr 207s r-cran-aer r-cran-bbmle r-cran-boot r-cran-car r-cran-cardata r-cran-caret 207s r-cran-cmprsk r-cran-coda r-cran-e1071 r-cran-emmeans r-cran-epir r-cran-gam 207s r-cran-gee r-cran-geepack r-cran-glmnet r-cran-gmm r-cran-irlba r-cran-ks 207s r-cran-lavaan r-cran-leaps r-cran-lme4 r-cran-lmtest r-cran-lsmeans 207s r-cran-maps r-cran-mclust r-cran-metafor r-cran-modeldata r-cran-multcomp 207s r-cran-network r-cran-ordinal r-cran-plm r-cran-psych r-cran-quantreg 207s r-cran-robust r-cran-robustbase r-cran-rsample r-cran-sandwich r-cran-sp 207s r-cran-spdep r-cran-spatialreg r-cran-spelling r-cran-survey 207s r-cran-systemfit r-cran-tseries r-cran-zoo r-cran-kernsmooth r-cran-kernlab 207s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-rmysql r-cran-polyclip 207s r-cran-lubridate r-cran-scatterplot3d r-cran-magick r-cran-sf r-cran-getopt 207s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 207s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-bench 207s r-cran-here debhelper ghostscript gv | postscript-viewer perl-tk xpdf 207s | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc 207s wp2latex 207s Recommended packages: 207s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 207s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 207s r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot 207s r-cran-covr r-cran-brms r-cran-broom.mixed r-cran-cmprsk r-cran-effects 207s r-cran-emmeans r-cran-gam r-cran-gee r-cran-geepack r-cran-ggeffects 207s r-cran-glmmtmb r-cran-lavaan r-cran-lme4 r-cran-mice r-cran-ordinal 207s r-cran-parameters r-cran-plm r-cran-pscl r-cran-rstanarm r-cran-spelling 207s r-cran-survey r-cran-vgam r-cran-thematic r-cran-cliapp r-cran-mockery 207s r-cran-fastmatch r-cran-devtools r-cran-tinytest r-cran-whoami r-cran-bench 207s r-cran-decor r-cran-lobstr r-cran-webutils r-cran-r.utils r-cran-xts 207s r-cran-nanotime r-cran-zoo r-cran-rpostgresql r-cran-gh r-cran-rmysql 207s r-cran-unitizer r-cran-rsvg r-cran-geosphere r-cran-ggforce r-cran-igraph 207s r-cran-intergraph r-cran-maps r-cran-mapproj r-cran-network r-cran-sna 207s r-cran-roxygen2 r-cran-crosstalk r-cran-vdiffr r-cran-hexbin r-cran-multcomp 207s r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-sf r-cran-svglite 207s r-cran-reshape r-cran-cairo r-cran-markdown r-cran-r.rsp r-cran-gridsvg 207s r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 207s node-highlight.js r-cran-snakecase r-cran-lintr r-cran-tidyverse 207s r-cran-r.devices r-cran-sodium r-cran-gridgraphics r-cran-lubridate 207s r-cran-mathjaxr r-cran-mockr r-cran-doparallel r-cran-foreach 207s r-cran-iterators r-cran-itertools r-cran-webfakes r-cran-future r-cran-pingr 207s r-cran-runit r-cran-usethis r-cran-dygraphs r-cran-dbitest r-cran-gert 207s r-cran-rvest r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv 207s lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 207s x11-utils x11-xserver-utils 207s The following packages will be REMOVED: 207s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 207s The following NEW packages will be installed: 207s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 207s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 207s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 207s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 207s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 207s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 207s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 207s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 207s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 207s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 207s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 207s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 207s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 207s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 207s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 207s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 207s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 207s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 207s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 207s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 207s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 207s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 207s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpotrace0 libpsl5t64 207s libptexenc1 libreadline-dev libreadline8t64 libsharpyuv0 libsm6 207s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 207s libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 207s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 207s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 207s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 207s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 207s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 207s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 207s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-biovizbase 207s r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 207s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 207s r-bioc-genomicranges r-bioc-ggbio r-bioc-graph r-bioc-iranges 207s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi r-bioc-protgenerics 207s r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 207s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 207s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 207s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 207s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 207s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 207s r-cran-broom.helpers r-cran-bslib r-cran-cachem r-cran-callr 207s r-cran-checkmate r-cran-chron r-cran-cli r-cran-clipr r-cran-cluster 207s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 207s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 207s r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj r-cran-digest 207s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 207s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-forcats 207s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 207s r-cran-futile.options r-cran-generics r-cran-ggally r-cran-ggplot2 207s r-cran-ggstats r-cran-glue r-cran-gridextra r-cran-gtable r-cran-haven 207s r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable r-cran-htmltools 207s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-interp r-cran-isoband 207s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 207s r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice 207s r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle r-cran-littler 207s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 207s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 207s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 207s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 207s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 207s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 207s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl r-cran-readr 207s r-cran-rematch2 r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 207s r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 207s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 207s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 207s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 207s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite 207s r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 207s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 207s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 207s xdg-utils zip zlib1g-dev 207s The following packages will be upgraded: 207s curl 207s 1 upgraded, 354 newly installed, 5 to remove and 0 not upgraded. 207s Need to get 494 MB/494 MB of archives. 207s After this operation, 1460 MB of additional disk space will be used. 207s Get:1 /tmp/autopkgtest.K3KEv3/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [752 B] 207s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 207s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 207s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 207s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 208s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 208s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 208s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 208s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 208s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 208s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 208s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 208s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 208s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 208s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 208s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 208s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 208s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 208s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 208s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 208s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 208s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 208s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 208s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 208s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 208s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 209s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 209s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 209s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 209s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 209s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 210s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 210s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 210s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 210s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 210s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 211s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 211s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 211s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 211s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 211s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 211s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 211s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 211s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 211s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 211s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 211s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 211s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 211s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 211s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 211s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 211s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 211s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 212s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 212s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 212s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 212s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 212s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 212s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 212s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 212s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 212s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 212s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 212s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 212s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 212s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 212s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 212s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 212s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 212s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 212s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 212s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 212s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 212s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 212s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 212s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 212s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 212s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 213s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 213s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 213s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 213s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 213s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 213s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 213s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 213s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 213s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 213s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 213s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 213s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 213s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 213s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 213s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 213s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 213s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 213s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 213s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 213s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 213s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 213s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 213s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 214s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 214s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 214s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 214s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 214s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 214s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 214s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 214s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 214s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 214s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 214s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 214s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 214s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 214s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 214s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 214s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 214s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 214s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 214s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 214s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 214s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 214s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 214s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 214s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 214s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 214s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 214s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 215s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 215s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 215s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 215s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 215s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 215s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 215s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 215s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 215s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 215s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 215s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 215s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 215s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 215s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 215s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 216s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 216s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 216s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 216s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 216s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 216s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 216s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 216s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 216s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 216s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 216s Get:154 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 216s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 216s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 216s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 216s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 216s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 216s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 217s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 217s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 217s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 217s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 217s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 217s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 217s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 217s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 217s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 217s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 217s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 217s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 217s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 217s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 217s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 217s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 217s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 217s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 217s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 217s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 217s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 217s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 217s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 217s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 217s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 217s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 217s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 217s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 217s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 217s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 217s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 217s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 217s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 218s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 218s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 218s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 218s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 218s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 218s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 218s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 218s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 218s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 218s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 218s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 218s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 218s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 219s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 219s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 219s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 219s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 219s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 219s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 219s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 219s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 219s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 219s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 219s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 219s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 219s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 219s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 219s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 219s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 219s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 219s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 219s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 219s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 219s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 219s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 219s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 219s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 219s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 219s Get:232 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 219s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 219s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 219s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 219s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 219s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 219s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 219s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 219s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 219s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 219s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 219s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 220s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 220s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 220s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 220s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 220s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 220s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 220s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 220s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 220s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 220s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 220s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 220s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 220s Get:256 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 220s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 220s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 220s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 220s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 222s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 222s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 222s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 222s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 222s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 222s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 222s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 222s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-farver arm64 2.1.1-1 [1336 kB] 222s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 222s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 222s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-munsell all 0.5.0-2build1 [208 kB] 222s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 222s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 222s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 222s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 222s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 222s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 222s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 222s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB] 223s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 223s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 223s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 223s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cluster arm64 2.1.6-1 [552 kB] 223s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 223s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rpart arm64 4.1.23-1 [660 kB] 223s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nnet arm64 7.3-19-2 [111 kB] 223s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-foreign arm64 0.8.86-1 [240 kB] 223s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 223s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-data.table arm64 1.14.10+dfsg-1 [1844 kB] 223s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-backports arm64 1.4.1-1 [101 kB] 223s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-checkmate arm64 2.3.1-1 [711 kB] 223s Get:292 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 223s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rstudioapi all 0.15.0-1 [277 kB] 223s Get:294 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltable all 2.4.2-1 [381 kB] 223s Get:295 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 223s Get:296 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 223s Get:297 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-chron arm64 2.3-61-2 [186 kB] 223s Get:298 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jpeg arm64 0.1-10-1 [30.8 kB] 223s Get:299 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-deldir arm64 2.0-4-1 [270 kB] 223s Get:300 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcppeigen arm64 0.3.3.9.4-1 [1180 kB] 223s Get:301 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-interp arm64 1.1-6-1 [1433 kB] 223s Get:302 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-latticeextra all 0.6-30-1 [2198 kB] 223s Get:303 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-acepack arm64 1.4.2-1 [60.5 kB] 223s Get:304 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hmisc arm64 5.1-1-1 [3486 kB] 223s Get:305 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dichromat all 1:2.0-0.1-1 [148 kB] 224s Get:306 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 224s Get:307 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 224s Get:308 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 224s Get:309 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 224s Get:310 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 224s Get:311 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 224s Get:312 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 224s Get:313 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 224s Get:314 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 224s Get:315 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 224s Get:316 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 224s Get:317 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 224s Get:318 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 225s Get:319 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 225s Get:320 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-bsgenome all 1.70.2-1 [6975 kB] 225s Get:321 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-variantannotation arm64 1.48.1-1 [3526 kB] 225s Get:322 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-protgenerics all 1.34.0-1 [225 kB] 225s Get:323 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 225s Get:324 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biovizbase arm64 1.50.0-1 [2665 kB] 225s Get:325 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 225s Get:326 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB] 225s Get:327 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-graph arm64 1.80.0-1 [1289 kB] 225s Get:328 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rbgl arm64 1.78.0+dfsg-1 [541 kB] 225s Get:329 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-organismdbi all 1.44.0+dfsg-1 [456 kB] 225s Get:330 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 225s Get:331 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-forcats all 1.0.0-1 [369 kB] 225s Get:332 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-clipr all 0.8.0-1 [53.5 kB] 225s Get:333 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 225s Get:334 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vroom arm64 1.6.5-1 [832 kB] 225s Get:335 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-readr arm64 2.1.5-1 [756 kB] 225s Get:336 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-haven arm64 2.5.4-1 [338 kB] 225s Get:337 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labelled all 2.12.0-2 [312 kB] 225s Get:338 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-broom.helpers all 1.14.0-2 [557 kB] 226s Get:339 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-patchwork all 1.2.0-1 [3161 kB] 226s Get:340 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggstats all 0.5.1-2 [839 kB] 226s Get:341 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggally all 2.2.1-1 [2022 kB] 226s Get:342 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-ggbio all 1.50.0-1 [2939 kB] 226s Get:343 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 226s Get:344 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 226s Get:345 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 226s Get:346 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 226s Get:347 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 226s Get:348 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 226s Get:349 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 226s Get:350 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 226s Get:351 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 226s Get:352 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 226s Get:353 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 226s Get:354 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 226s Get:355 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 228s Preconfiguring packages ... 228s Fetched 494 MB in 19s (25.9 MB/s) 228s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 228s wget depends on libpsl5 (>= 0.16.0). 228s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 228s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 228s 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 228s Removing libpsl5:arm64 (0.21.2-1build1) ... 229s Selecting previously unselected package libpsl5t64:arm64. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 229s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 229s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 229s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 229s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 229s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 229s Selecting previously unselected package libcurl4t64:arm64. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 229s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 229s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 229s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 229s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 229s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 229s 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 229s Removing libpng16-16:arm64 (1.6.43-1) ... 229s Selecting previously unselected package libpng16-16t64:arm64. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 229s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 229s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 229s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 229s parted depends on libreadline8 (>= 6.0). 229s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 229s gpgsm depends on libreadline8 (>= 6.0). 229s gpgconf depends on libreadline8 (>= 6.0). 229s gpg depends on libreadline8 (>= 6.0). 229s gawk depends on libreadline8 (>= 6.0). 229s fdisk depends on libreadline8 (>= 6.0). 229s 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 229s Removing libreadline8:arm64 (8.2-3) ... 229s Selecting previously unselected package libreadline8t64:arm64. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 229s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 229s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 229s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 229s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 229s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 229s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 229s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 229s lsof depends on libtirpc3 (>= 1.0.2). 229s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 229s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 229s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 229s iproute2 depends on libtirpc3 (>= 1.0.2). 229s 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 229s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 229s Selecting previously unselected package libtirpc3t64:arm64. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 229s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 229s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 229s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 229s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 229s Selecting previously unselected package libc-dev-bin. 230s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 230s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 230s Selecting previously unselected package linux-libc-dev:arm64. 230s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 230s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 230s Selecting previously unselected package libcrypt-dev:arm64. 230s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 230s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 230s Selecting previously unselected package libtirpc-dev:arm64. 230s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 230s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 230s Selecting previously unselected package libnsl-dev:arm64. 230s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 230s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 230s Selecting previously unselected package rpcsvc-proto. 230s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 230s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 230s Selecting previously unselected package libc6-dev:arm64. 230s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 230s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 231s Selecting previously unselected package libisl23:arm64. 231s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 231s Unpacking libisl23:arm64 (0.26-3) ... 231s Selecting previously unselected package libmpc3:arm64. 231s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 231s Unpacking libmpc3:arm64 (1.3.1-1) ... 231s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 231s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 231s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 231s Selecting previously unselected package cpp-13. 231s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 231s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 231s Selecting previously unselected package cpp-aarch64-linux-gnu. 231s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 231s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 231s Selecting previously unselected package cpp. 231s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 231s Unpacking cpp (4:13.2.0-7ubuntu1) ... 231s Selecting previously unselected package libcc1-0:arm64. 231s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 231s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 231s Selecting previously unselected package libgomp1:arm64. 231s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 231s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 231s Selecting previously unselected package libitm1:arm64. 232s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package libatomic1:arm64. 232s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package libasan8:arm64. 232s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package liblsan0:arm64. 232s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package libtsan2:arm64. 232s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package libubsan1:arm64. 232s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package libhwasan0:arm64. 232s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 232s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 232s Selecting previously unselected package libgcc-13-dev:arm64. 232s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 232s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 232s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 232s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 232s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 233s Selecting previously unselected package gcc-13. 233s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 233s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 233s Selecting previously unselected package gcc-aarch64-linux-gnu. 233s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 233s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 233s Selecting previously unselected package gcc. 233s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 233s Unpacking gcc (4:13.2.0-7ubuntu1) ... 233s Selecting previously unselected package libstdc++-13-dev:arm64. 233s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 233s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 233s Selecting previously unselected package g++-13-aarch64-linux-gnu. 233s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 233s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 233s Selecting previously unselected package g++-13. 234s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 234s Unpacking g++-13 (13.2.0-17ubuntu2) ... 234s Selecting previously unselected package g++-aarch64-linux-gnu. 234s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 234s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 234s Selecting previously unselected package g++. 234s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 234s Unpacking g++ (4:13.2.0-7ubuntu1) ... 234s Selecting previously unselected package build-essential. 234s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 234s Unpacking build-essential (12.10ubuntu1) ... 234s Selecting previously unselected package dctrl-tools. 234s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 234s Unpacking dctrl-tools (2.24-3build2) ... 234s Selecting previously unselected package fonts-dejavu-mono. 234s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 234s Unpacking fonts-dejavu-mono (2.37-8) ... 234s Selecting previously unselected package fonts-dejavu-core. 234s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 234s Unpacking fonts-dejavu-core (2.37-8) ... 234s Selecting previously unselected package fontconfig-config. 234s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 234s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 234s Selecting previously unselected package libfontconfig1:arm64. 234s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 234s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 234s Selecting previously unselected package fontconfig. 234s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 234s Unpacking fontconfig (2.15.0-1ubuntu1) ... 234s Selecting previously unselected package fonts-font-awesome. 234s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 234s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 234s Selecting previously unselected package fonts-glyphicons-halflings. 234s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 234s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 234s Selecting previously unselected package fonts-lmodern. 234s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 234s Unpacking fonts-lmodern (2.005-1) ... 234s Selecting previously unselected package fonts-mathjax. 235s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 235s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 235s Selecting previously unselected package libgfortran5:arm64. 235s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 235s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 235s Selecting previously unselected package libgfortran-13-dev:arm64. 235s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 235s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 235s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 235s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 235s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 235s Selecting previously unselected package gfortran-13. 235s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 235s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 235s Selecting previously unselected package gfortran-aarch64-linux-gnu. 235s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 235s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 235s Selecting previously unselected package gfortran. 235s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 235s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 235s Selecting previously unselected package icu-devtools. 235s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 235s Unpacking icu-devtools (74.2-1ubuntu1) ... 235s Selecting previously unselected package javascript-common. 235s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 235s Unpacking javascript-common (11+nmu1) ... 235s Selecting previously unselected package libio-string-perl. 236s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 236s Unpacking libio-string-perl (1.08-4) ... 236s Selecting previously unselected package liblatex-tounicode-perl. 236s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 236s Unpacking liblatex-tounicode-perl (0.54-2) ... 236s Selecting previously unselected package libbibtex-parser-perl. 236s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 236s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 236s Selecting previously unselected package libblas3:arm64. 236s Preparing to unpack .../055-libblas3_3.12.0-3_arm64.deb ... 236s Unpacking libblas3:arm64 (3.12.0-3) ... 236s Selecting previously unselected package libblas-dev:arm64. 236s Preparing to unpack .../056-libblas-dev_3.12.0-3_arm64.deb ... 236s Unpacking libblas-dev:arm64 (3.12.0-3) ... 236s Selecting previously unselected package libboost1.83-dev:arm64. 236s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 236s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 238s Selecting previously unselected package libboost-dev:arm64. 238s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 238s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 238s Selecting previously unselected package libbz2-dev:arm64. 238s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 238s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 238s Selecting previously unselected package libpixman-1-0:arm64. 238s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_arm64.deb ... 238s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 238s Selecting previously unselected package libxcb-render0:arm64. 238s Preparing to unpack .../061-libxcb-render0_1.15-1_arm64.deb ... 238s Unpacking libxcb-render0:arm64 (1.15-1) ... 238s Selecting previously unselected package libxcb-shm0:arm64. 238s Preparing to unpack .../062-libxcb-shm0_1.15-1_arm64.deb ... 238s Unpacking libxcb-shm0:arm64 (1.15-1) ... 238s Selecting previously unselected package libxrender1:arm64. 238s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 238s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 238s Selecting previously unselected package libcairo2:arm64. 238s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 238s Unpacking libcairo2:arm64 (1.18.0-1) ... 238s Selecting previously unselected package libdatrie1:arm64. 238s Preparing to unpack .../065-libdatrie1_0.2.13-3_arm64.deb ... 238s Unpacking libdatrie1:arm64 (0.2.13-3) ... 238s Selecting previously unselected package libdeflate0:arm64. 238s Preparing to unpack .../066-libdeflate0_1.19-1_arm64.deb ... 238s Unpacking libdeflate0:arm64 (1.19-1) ... 238s Selecting previously unselected package libgraphite2-3:arm64. 238s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_arm64.deb ... 238s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 238s Selecting previously unselected package libharfbuzz0b:arm64. 239s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_arm64.deb ... 239s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 239s Selecting previously unselected package x11-common. 239s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 239s Unpacking x11-common (1:7.7+23ubuntu2) ... 239s Selecting previously unselected package libice6:arm64. 239s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_arm64.deb ... 239s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 239s Selecting previously unselected package libicu-dev:arm64. 239s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_arm64.deb ... 239s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 240s Selecting previously unselected package libjpeg-turbo8:arm64. 240s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 240s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 240s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 240s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 240s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 240s Selecting previously unselected package libjpeg8:arm64. 240s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_arm64.deb ... 240s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 240s Selecting previously unselected package libjpeg8-dev:arm64. 240s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 240s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 240s Selecting previously unselected package libjpeg-dev:arm64. 240s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 240s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 240s Selecting previously unselected package libjs-bootstrap. 240s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 240s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 240s Selecting previously unselected package libjs-popper.js. 241s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 241s Unpacking libjs-popper.js (1.16.1+ds-6) ... 241s Selecting previously unselected package libjs-bootstrap4. 241s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 241s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 241s Selecting previously unselected package libjs-d3. 241s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 241s Unpacking libjs-d3 (3.5.17-4) ... 241s Selecting previously unselected package libjs-es5-shim. 241s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 241s Unpacking libjs-es5-shim (4.6.7-2) ... 241s Selecting previously unselected package libjs-highlight.js. 241s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 241s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 241s Selecting previously unselected package libjs-jquery. 241s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 241s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 241s Selecting previously unselected package libjs-jquery-datatables. 241s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 241s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 241s Selecting previously unselected package libjs-sifter.js. 241s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 241s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 241s Selecting previously unselected package libjs-microplugin.js. 241s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 241s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 241s Selecting previously unselected package libjs-jquery-selectize.js. 241s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 241s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 241s Selecting previously unselected package libjs-jquery-ui. 241s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 241s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 241s Selecting previously unselected package libjs-json. 241s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 241s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 241s Selecting previously unselected package libjs-lunr. 242s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 242s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 242s Selecting previously unselected package libjs-prettify. 242s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 242s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 242s Selecting previously unselected package libkpathsea6:arm64. 242s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 242s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 242s Selecting previously unselected package liblapack3:arm64. 242s Preparing to unpack .../093-liblapack3_3.12.0-3_arm64.deb ... 242s Unpacking liblapack3:arm64 (3.12.0-3) ... 242s Selecting previously unselected package liblapack-dev:arm64. 242s 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Unpacking libthai0:arm64 (0.1.29-2) ... 243s Selecting previously unselected package libpango-1.0-0:arm64. 243s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 243s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 243s Selecting previously unselected package libpangoft2-1.0-0:arm64. 243s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 243s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 243s Selecting previously unselected package libpangocairo-1.0-0:arm64. 243s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 243s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 243s Selecting previously unselected package libpaper1:arm64. 243s Preparing to unpack .../103-libpaper1_1.1.29_arm64.deb ... 243s Unpacking libpaper1:arm64 (1.1.29) ... 243s Selecting previously unselected package libpaper-utils. 243s Preparing to unpack .../104-libpaper-utils_1.1.29_arm64.deb ... 243s Unpacking libpaper-utils (1.1.29) ... 243s 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unselected package zlib1g-dev:arm64. 243s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 243s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 243s Selecting previously unselected package libpng-dev:arm64. 243s Preparing to unpack .../111-libpng-dev_1.6.43-3_arm64.deb ... 243s Unpacking libpng-dev:arm64 (1.6.43-3) ... 243s Selecting previously unselected package libpotrace0:arm64. 243s Preparing to unpack .../112-libpotrace0_1.16-2_arm64.deb ... 243s Unpacking libpotrace0:arm64 (1.16-2) ... 243s Selecting previously unselected package libptexenc1:arm64. 243s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_arm64.deb ... 243s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 244s Selecting previously unselected package libreadline-dev:arm64. 244s Preparing to unpack .../114-libreadline-dev_8.2-3.1_arm64.deb ... 244s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 244s Selecting previously unselected package libsharpyuv0:arm64. 244s 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libxss1:arm64 (1:1.2.3-1build2) ... 245s Selecting previously unselected package libtk8.6:arm64. 245s Preparing to unpack .../126-libtk8.6_8.6.13-2_arm64.deb ... 245s Unpacking libtk8.6:arm64 (8.6.13-2) ... 245s Selecting previously unselected package libxt6t64:arm64. 245s Preparing to unpack .../127-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 245s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 245s Selecting previously unselected package libxmu6:arm64. 245s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_arm64.deb ... 245s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 245s Selecting previously unselected package libxpm4:arm64. 245s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_arm64.deb ... 245s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 245s Selecting previously unselected package libxaw7:arm64. 245s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_arm64.deb ... 245s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 245s Selecting previously unselected package libxi6:arm64. 245s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_arm64.deb ... 245s Unpacking libxi6:arm64 (2:1.8.1-1) ... 245s Selecting previously unselected package libzzip-0-13:arm64. 245s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 245s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 245s Selecting previously unselected package zip. 245s Preparing to unpack .../133-zip_3.0-13_arm64.deb ... 245s Unpacking zip (3.0-13) ... 245s Selecting previously unselected package unzip. 245s Preparing to unpack .../134-unzip_6.0-28ubuntu3_arm64.deb ... 245s Unpacking unzip (6.0-28ubuntu3) ... 245s Selecting previously unselected package xdg-utils. 245s Preparing to unpack .../135-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 245s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 246s Selecting previously unselected package r-base-core. 246s Preparing to unpack .../136-r-base-core_4.3.3-2build1_arm64.deb ... 246s Unpacking r-base-core (4.3.3-2build1) ... 248s Selecting previously unselected package r-cran-littler. 251s Preparing to unpack .../137-r-cran-littler_0.3.19-1_arm64.deb ... 251s Unpacking r-cran-littler (0.3.19-1) ... 252s Selecting previously unselected package littler. 253s Preparing to unpack .../138-littler_0.3.19-1_all.deb ... 253s Unpacking littler (0.3.19-1) ... 254s Selecting previously unselected package node-bootstrap-sass. 254s Preparing to unpack .../139-node-bootstrap-sass_3.4.3-2_all.deb ... 254s Unpacking node-bootstrap-sass (3.4.3-2) ... 254s Selecting previously unselected package node-html5shiv. 254s Preparing to unpack .../140-node-html5shiv_3.7.3+dfsg-5_all.deb ... 254s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 254s Selecting previously unselected package node-normalize.css. 254s Preparing to unpack .../141-node-normalize.css_8.0.1-5_all.deb ... 254s Unpacking node-normalize.css (8.0.1-5) ... 254s Selecting previously unselected package pandoc-data. 254s Preparing to unpack .../142-pandoc-data_3.1.3-1_all.deb ... 254s Unpacking pandoc-data (3.1.3-1) ... 254s Selecting previously unselected package pandoc. 254s Preparing to unpack .../143-pandoc_3.1.3+ds-2_arm64.deb ... 254s Unpacking pandoc (3.1.3+ds-2) ... 255s Selecting previously unselected package pkgconf-bin. 255s Preparing to unpack .../144-pkgconf-bin_1.8.1-2_arm64.deb ... 255s Unpacking pkgconf-bin (1.8.1-2) ... 255s Selecting previously unselected package pkgconf:arm64. 255s Preparing to unpack .../145-pkgconf_1.8.1-2_arm64.deb ... 255s Unpacking pkgconf:arm64 (1.8.1-2) ... 256s Selecting previously unselected package pkg-config:arm64. 256s Preparing to unpack .../146-pkg-config_1.8.1-2_arm64.deb ... 256s Unpacking pkg-config:arm64 (1.8.1-2) ... 256s Selecting previously unselected package liblzma-dev:arm64. 256s Preparing to unpack .../147-liblzma-dev_5.4.5-0.3_arm64.deb ... 256s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 256s Selecting previously unselected package r-base-dev. 256s Preparing to unpack .../148-r-base-dev_4.3.3-2build1_all.deb ... 256s Unpacking r-base-dev (4.3.3-2build1) ... 256s Selecting previously unselected package pkg-r-autopkgtest. 256s Preparing to unpack .../149-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 256s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 256s Selecting previously unselected package r-bioc-biocgenerics. 256s Preparing to unpack .../150-r-bioc-biocgenerics_0.48.1-2_all.deb ... 256s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 256s Selecting previously unselected package r-bioc-biobase. 256s Preparing to unpack .../151-r-bioc-biobase_2.62.0-1_arm64.deb ... 256s Unpacking r-bioc-biobase (2.62.0-1) ... 256s Selecting previously unselected package r-bioc-s4vectors. 256s Preparing to unpack .../152-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 256s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 256s Selecting previously unselected package r-bioc-iranges. 256s Preparing to unpack .../153-r-bioc-iranges_2.36.0-1_arm64.deb ... 256s Unpacking r-bioc-iranges (2.36.0-1) ... 256s Selecting previously unselected package r-cran-dbi. 256s Preparing to unpack .../154-r-cran-dbi_1.2.2-1_all.deb ... 256s Unpacking r-cran-dbi (1.2.2-1) ... 256s Selecting previously unselected package r-cran-bit. 256s Preparing to unpack .../155-r-cran-bit_4.0.5-1_arm64.deb ... 256s Unpacking r-cran-bit (4.0.5-1) ... 257s Selecting previously unselected package r-cran-bit64. 257s Preparing to unpack .../156-r-cran-bit64_4.0.5-1_arm64.deb ... 257s Unpacking r-cran-bit64 (4.0.5-1) ... 257s Selecting previously unselected package r-cran-rlang. 257s Preparing to unpack .../157-r-cran-rlang_1.1.3-1_arm64.deb ... 257s Unpacking r-cran-rlang (1.1.3-1) ... 257s Selecting previously unselected package r-cran-cli. 257s Preparing to unpack .../158-r-cran-cli_3.6.2-1_arm64.deb ... 257s Unpacking r-cran-cli (3.6.2-1) ... 258s Selecting previously unselected package r-cran-glue. 258s Preparing to unpack .../159-r-cran-glue_1.7.0-1_arm64.deb ... 258s Unpacking r-cran-glue (1.7.0-1) ... 258s Selecting previously unselected package r-cran-lifecycle. 258s Preparing to unpack .../160-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 258s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 258s Selecting previously unselected package r-cran-vctrs. 258s Preparing to unpack .../161-r-cran-vctrs_0.6.5-1_arm64.deb ... 258s Unpacking r-cran-vctrs (0.6.5-1) ... 258s Selecting previously unselected package r-cran-blob. 258s Preparing to unpack .../162-r-cran-blob_1.2.4-1_all.deb ... 258s Unpacking r-cran-blob (1.2.4-1) ... 258s Selecting previously unselected package r-cran-fastmap. 258s Preparing to unpack .../163-r-cran-fastmap_1.1.1-1_arm64.deb ... 258s Unpacking r-cran-fastmap (1.1.1-1) ... 258s Selecting previously unselected package r-cran-cachem. 258s Preparing to unpack .../164-r-cran-cachem_1.0.8-1_arm64.deb ... 258s Unpacking r-cran-cachem (1.0.8-1) ... 258s Selecting previously unselected package r-cran-memoise. 258s Preparing to unpack .../165-r-cran-memoise_2.0.1-1_all.deb ... 258s Unpacking r-cran-memoise (2.0.1-1) ... 258s Selecting previously unselected package r-cran-pkgconfig. 258s Preparing to unpack .../166-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 258s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 258s Selecting previously unselected package r-cran-plogr. 258s Preparing to unpack .../167-r-cran-plogr_0.2.0-3build1_all.deb ... 258s Unpacking r-cran-plogr (0.2.0-3build1) ... 258s Selecting previously unselected package r-cran-cpp11. 258s Preparing to unpack .../168-r-cran-cpp11_0.4.7-1_all.deb ... 258s Unpacking r-cran-cpp11 (0.4.7-1) ... 258s Selecting previously unselected package r-cran-rsqlite. 258s Preparing to unpack .../169-r-cran-rsqlite_2.3.4-1_arm64.deb ... 258s Unpacking r-cran-rsqlite (2.3.4-1) ... 258s Selecting previously unselected package r-cran-curl. 259s Preparing to unpack .../170-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 259s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 259s Selecting previously unselected package r-cran-jsonlite. 259s Preparing to unpack .../171-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 259s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 259s Selecting previously unselected package r-cran-mime. 259s Preparing to unpack .../172-r-cran-mime_0.12-1_arm64.deb ... 259s Unpacking r-cran-mime (0.12-1) ... 259s Selecting previously unselected package r-cran-sys. 259s Preparing to unpack .../173-r-cran-sys_3.4.2-1_arm64.deb ... 259s Unpacking r-cran-sys (3.4.2-1) ... 259s Selecting previously unselected package r-cran-askpass. 259s Preparing to unpack .../174-r-cran-askpass_1.2.0-1_arm64.deb ... 259s Unpacking r-cran-askpass (1.2.0-1) ... 259s Selecting previously unselected package r-cran-openssl. 259s Preparing to unpack .../175-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 259s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 259s Selecting previously unselected package r-cran-r6. 259s Preparing to unpack .../176-r-cran-r6_2.5.1-1_all.deb ... 259s Unpacking r-cran-r6 (2.5.1-1) ... 259s Selecting previously unselected package r-cran-httr. 259s Preparing to unpack .../177-r-cran-httr_1.4.7+dfsg-1_all.deb ... 259s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 259s Selecting previously unselected package r-cran-png. 259s Preparing to unpack .../178-r-cran-png_0.1-8-1_arm64.deb ... 259s Unpacking r-cran-png (0.1-8-1) ... 259s Selecting previously unselected package r-bioc-zlibbioc. 259s Preparing to unpack .../179-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 259s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 259s Selecting previously unselected package r-bioc-xvector. 259s Preparing to unpack .../180-r-bioc-xvector_0.42.0-1_arm64.deb ... 259s Unpacking r-bioc-xvector (0.42.0-1) ... 259s Selecting previously unselected package r-cran-bitops. 260s Preparing to unpack .../181-r-cran-bitops_1.0-7-1_arm64.deb ... 260s Unpacking r-cran-bitops (1.0-7-1) ... 260s Selecting previously unselected package r-cran-rcurl. 260s Preparing to unpack .../182-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 260s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 260s Selecting previously unselected package r-bioc-genomeinfodbdata. 260s Preparing to unpack .../183-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 260s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 260s Selecting previously unselected package r-bioc-genomeinfodb. 260s Preparing to unpack .../184-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 260s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 260s Selecting previously unselected package r-cran-crayon. 260s Preparing to unpack .../185-r-cran-crayon_1.5.2-1_all.deb ... 260s Unpacking r-cran-crayon (1.5.2-1) ... 260s Selecting previously unselected package r-bioc-biostrings. 261s Preparing to unpack .../186-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 261s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 261s Selecting previously unselected package r-bioc-keggrest. 261s Preparing to unpack .../187-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 261s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 261s Selecting previously unselected package r-bioc-annotationdbi. 261s Preparing to unpack .../188-r-bioc-annotationdbi_1.64.1-1_all.deb ... 261s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 261s Selecting previously unselected package r-bioc-genomicranges. 261s Preparing to unpack .../189-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 261s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 261s Selecting previously unselected package r-cran-lazyeval. 261s Preparing to unpack .../190-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 261s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 261s Selecting previously unselected package r-bioc-annotationfilter. 261s Preparing to unpack .../191-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 261s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 261s Selecting previously unselected package r-cran-generics. 261s Preparing to unpack .../192-r-cran-generics_0.1.3-1_all.deb ... 261s Unpacking r-cran-generics (0.1.3-1) ... 261s Selecting previously unselected package r-cran-magrittr. 261s Preparing to unpack .../193-r-cran-magrittr_2.0.3-1_arm64.deb ... 261s Unpacking r-cran-magrittr (2.0.3-1) ... 261s Selecting previously unselected package r-cran-fansi. 261s Preparing to unpack .../194-r-cran-fansi_1.0.5-1_arm64.deb ... 261s Unpacking r-cran-fansi (1.0.5-1) ... 261s Selecting previously unselected package r-cran-utf8. 261s Preparing to unpack .../195-r-cran-utf8_1.2.4-1_arm64.deb ... 261s Unpacking r-cran-utf8 (1.2.4-1) ... 261s Selecting previously unselected package r-cran-pillar. 261s Preparing to unpack .../196-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 261s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 261s Selecting previously unselected package r-cran-tibble. 261s Preparing to unpack .../197-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 261s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 261s Selecting previously unselected package r-cran-withr. 261s Preparing to unpack .../198-r-cran-withr_2.5.0-1_all.deb ... 261s Unpacking r-cran-withr (2.5.0-1) ... 262s Selecting previously unselected package r-cran-tidyselect. 262s Preparing to unpack .../199-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 262s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 262s Selecting previously unselected package r-cran-dplyr. 262s Preparing to unpack .../200-r-cran-dplyr_1.1.4-1_arm64.deb ... 262s Unpacking r-cran-dplyr (1.1.4-1) ... 262s Selecting previously unselected package r-cran-purrr. 262s Preparing to unpack .../201-r-cran-purrr_1.0.2-1_arm64.deb ... 262s Unpacking r-cran-purrr (1.0.2-1) ... 262s Selecting previously unselected package r-cran-stringi. 262s Preparing to unpack .../202-r-cran-stringi_1.8.3-1_arm64.deb ... 262s Unpacking r-cran-stringi (1.8.3-1) ... 262s Selecting previously unselected package r-cran-stringr. 262s Preparing to unpack .../203-r-cran-stringr_1.5.1-1_all.deb ... 262s Unpacking r-cran-stringr (1.5.1-1) ... 262s Selecting previously unselected package r-cran-tidyr. 262s Preparing to unpack .../204-r-cran-tidyr_1.3.1-1_arm64.deb ... 262s Unpacking r-cran-tidyr (1.3.1-1) ... 262s Selecting previously unselected package r-cran-dbplyr. 262s Preparing to unpack .../205-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 262s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 262s Selecting previously unselected package r-cran-filelock. 262s Preparing to unpack .../206-r-cran-filelock_1.0.3-1_arm64.deb ... 262s Unpacking r-cran-filelock (1.0.3-1) ... 262s Selecting previously unselected package r-bioc-biocfilecache. 262s Preparing to unpack .../207-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 262s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 262s Selecting previously unselected package r-bioc-biocio. 262s Preparing to unpack .../208-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 262s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 263s Selecting previously unselected package r-cran-formatr. 263s Preparing to unpack .../209-r-cran-formatr_1.14-1_all.deb ... 263s Unpacking r-cran-formatr (1.14-1) ... 263s Selecting previously unselected package r-cran-lambda.r. 263s Preparing to unpack .../210-r-cran-lambda.r_1.2.4-2build1_all.deb ... 263s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 263s Selecting previously unselected package r-cran-futile.options. 263s Preparing to unpack .../211-r-cran-futile.options_1.0.1-3build1_all.deb ... 263s Unpacking r-cran-futile.options (1.0.1-3build1) ... 263s Selecting previously unselected package r-cran-futile.logger. 263s Preparing to unpack .../212-r-cran-futile.logger_1.4.3-4build1_all.deb ... 263s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 263s Selecting previously unselected package r-cran-snow. 263s Preparing to unpack .../213-r-cran-snow_1%3a0.4.4-2_all.deb ... 263s Unpacking r-cran-snow (1:0.4.4-2) ... 263s Selecting previously unselected package r-cran-codetools. 263s Preparing to unpack .../214-r-cran-codetools_0.2-19-1_all.deb ... 263s Unpacking r-cran-codetools (0.2-19-1) ... 263s Selecting previously unselected package r-cran-bh. 263s Preparing to unpack .../215-r-cran-bh_1.84.0-1_all.deb ... 263s Unpacking r-cran-bh (1.84.0-1) ... 263s Selecting previously unselected package r-bioc-biocparallel. 263s Preparing to unpack .../216-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 263s Unpacking r-bioc-biocparallel (1.36.0-1) ... 263s Selecting previously unselected package r-cran-base64enc. 263s Preparing to unpack .../217-r-cran-base64enc_0.1-3-3_arm64.deb ... 263s Unpacking r-cran-base64enc (0.1-3-3) ... 263s Selecting previously unselected package r-cran-digest. 263s Preparing to unpack .../218-r-cran-digest_0.6.34-1_arm64.deb ... 263s Unpacking r-cran-digest (0.6.34-1) ... 263s Selecting previously unselected package r-cran-ellipsis. 263s Preparing to unpack .../219-r-cran-ellipsis_0.3.2-2_arm64.deb ... 263s Unpacking r-cran-ellipsis (0.3.2-2) ... 263s Selecting previously unselected package r-cran-htmltools. 263s Preparing to unpack .../220-r-cran-htmltools_0.5.7-1_arm64.deb ... 263s Unpacking r-cran-htmltools (0.5.7-1) ... 263s Selecting previously unselected package r-cran-evaluate. 263s Preparing to unpack .../221-r-cran-evaluate_0.23-1_all.deb ... 263s Unpacking r-cran-evaluate (0.23-1) ... 263s Selecting previously unselected package r-cran-xfun. 263s Preparing to unpack .../222-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 263s Unpacking r-cran-xfun (0.41+dfsg-1) ... 263s Selecting previously unselected package r-cran-highr. 263s Preparing to unpack .../223-r-cran-highr_0.10+dfsg-1_all.deb ... 263s Unpacking r-cran-highr (0.10+dfsg-1) ... 263s Selecting previously unselected package r-cran-yaml. 263s Preparing to unpack .../224-r-cran-yaml_2.3.8-1_arm64.deb ... 263s Unpacking r-cran-yaml (2.3.8-1) ... 263s Selecting previously unselected package libjs-mathjax. 264s Preparing to unpack .../225-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 264s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 264s Selecting previously unselected package r-cran-knitr. 264s Preparing to unpack .../226-r-cran-knitr_1.45+dfsg-1_all.deb ... 264s Unpacking r-cran-knitr (1.45+dfsg-1) ... 264s Selecting previously unselected package r-cran-jquerylib. 264s Preparing to unpack .../227-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 264s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 264s Selecting previously unselected package r-cran-fs. 264s Preparing to unpack .../228-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 264s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 264s Selecting previously unselected package r-cran-rappdirs. 264s Preparing to unpack .../229-r-cran-rappdirs_0.3.3-1_arm64.deb ... 264s Unpacking r-cran-rappdirs (0.3.3-1) ... 264s Selecting previously unselected package r-cran-sass. 264s Preparing to unpack .../230-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 264s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 265s Selecting previously unselected package r-cran-bslib. 265s Preparing to unpack .../231-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 265s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 265s Selecting previously unselected package r-cran-fontawesome. 265s Preparing to unpack .../232-r-cran-fontawesome_0.5.2-1_all.deb ... 265s Unpacking r-cran-fontawesome (0.5.2-1) ... 265s Selecting previously unselected package r-cran-tinytex. 265s Preparing to unpack .../233-r-cran-tinytex_0.49-1_all.deb ... 265s Unpacking r-cran-tinytex (0.49-1) ... 266s Selecting previously unselected package libjs-modernizr. 266s Preparing to unpack .../234-libjs-modernizr_2.6.2+ds1-5_all.deb ... 267s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 267s Selecting previously unselected package r-cran-pkgkitten. 267s Preparing to unpack .../235-r-cran-pkgkitten_0.2.3-1_all.deb ... 267s Unpacking r-cran-pkgkitten (0.2.3-1) ... 267s Selecting previously unselected package r-cran-rcpp. 267s Preparing to unpack .../236-r-cran-rcpp_1.0.12-1_arm64.deb ... 267s Unpacking r-cran-rcpp (1.0.12-1) ... 267s Selecting previously unselected package r-cran-later. 267s Preparing to unpack .../237-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 267s Unpacking r-cran-later (1.3.2+dfsg-1) ... 267s Selecting previously unselected package r-cran-promises. 267s Preparing to unpack .../238-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 267s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 267s Selecting previously unselected package r-cran-httpuv. 267s Preparing to unpack .../239-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 267s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 267s Selecting previously unselected package r-cran-xtable. 267s Preparing to unpack .../240-r-cran-xtable_1%3a1.8-4-2_all.deb ... 267s Unpacking r-cran-xtable (1:1.8-4-2) ... 267s Selecting previously unselected package r-cran-sourcetools. 267s Preparing to unpack .../241-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 267s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 267s Selecting previously unselected package r-cran-commonmark. 267s Preparing to unpack .../242-r-cran-commonmark_1.9.1-1_arm64.deb ... 267s Unpacking r-cran-commonmark (1.9.1-1) ... 267s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 267s Preparing to unpack .../243-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 267s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 267s Selecting previously unselected package r-cran-shiny. 267s Preparing to unpack .../244-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 267s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 268s Selecting previously unselected package r-cran-rmarkdown. 268s Preparing to unpack .../245-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 268s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 268s Selecting previously unselected package r-cran-bookdown. 268s Preparing to unpack .../246-r-cran-bookdown_0.37+dfsg-1_all.deb ... 268s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 268s Selecting previously unselected package r-cran-biocmanager. 268s Preparing to unpack .../247-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 268s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 268s Selecting previously unselected package tex-common. 268s Preparing to unpack .../248-tex-common_6.18_all.deb ... 268s Unpacking tex-common (6.18) ... 268s Selecting previously unselected package t1utils. 268s Preparing to unpack .../249-t1utils_1.41-4build2_arm64.deb ... 268s Unpacking t1utils (1.41-4build2) ... 268s Selecting previously unselected package texlive-binaries. 268s Preparing to unpack .../250-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 268s Unpacking texlive-binaries (2023.20230311.66589-9) ... 269s Selecting previously unselected package texlive-base. 271s Preparing to unpack .../251-texlive-base_2023.20240207-1_all.deb ... 271s Unpacking texlive-base (2023.20240207-1) ... 272s Selecting previously unselected package texlive-latex-base. 272s Preparing to unpack .../252-texlive-latex-base_2023.20240207-1_all.deb ... 272s Unpacking texlive-latex-base (2023.20240207-1) ... 272s Selecting previously unselected package texlive-bibtex-extra. 272s Preparing to unpack .../253-texlive-bibtex-extra_2023.20240207-1_all.deb ... 272s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 275s Selecting previously unselected package r-bioc-biocstyle. 275s Preparing to unpack .../254-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 275s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 275s Selecting previously unselected package r-cran-xml. 275s Preparing to unpack .../255-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 275s Unpacking r-cran-xml (3.99-0.16.1-1) ... 275s Selecting previously unselected package r-cran-hms. 275s Preparing to unpack .../256-r-cran-hms_1.1.3-1_all.deb ... 275s Unpacking r-cran-hms (1.1.3-1) ... 275s Selecting previously unselected package r-cran-prettyunits. 275s Preparing to unpack .../257-r-cran-prettyunits_1.2.0-1_all.deb ... 275s Unpacking r-cran-prettyunits (1.2.0-1) ... 276s Selecting previously unselected package r-cran-progress. 276s Preparing to unpack .../258-r-cran-progress_1.2.3-1_all.deb ... 276s Unpacking r-cran-progress (1.2.3-1) ... 276s Selecting previously unselected package r-cran-xml2. 276s Preparing to unpack .../259-r-cran-xml2_1.3.6-1_arm64.deb ... 276s Unpacking r-cran-xml2 (1.3.6-1) ... 276s Selecting previously unselected package r-bioc-biomart. 276s Preparing to unpack .../260-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 276s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 276s Selecting previously unselected package r-cran-farver. 276s Preparing to unpack .../261-r-cran-farver_2.1.1-1_arm64.deb ... 276s Unpacking r-cran-farver (2.1.1-1) ... 276s Selecting previously unselected package r-cran-labeling. 276s Preparing to unpack .../262-r-cran-labeling_0.4.3-1_all.deb ... 276s Unpacking r-cran-labeling (0.4.3-1) ... 276s Selecting previously unselected package r-cran-colorspace. 276s Preparing to unpack .../263-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 276s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 276s Selecting previously unselected package r-cran-munsell. 276s Preparing to unpack .../264-r-cran-munsell_0.5.0-2build1_all.deb ... 276s Unpacking r-cran-munsell (0.5.0-2build1) ... 276s Selecting previously unselected package r-cran-rcolorbrewer. 276s Preparing to unpack .../265-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 276s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 276s Selecting previously unselected package r-cran-viridislite. 276s Preparing to unpack .../266-r-cran-viridislite_0.4.2-2_all.deb ... 276s Unpacking r-cran-viridislite (0.4.2-2) ... 276s Selecting previously unselected package r-cran-scales. 276s Preparing to unpack .../267-r-cran-scales_1.3.0-1_all.deb ... 276s Unpacking r-cran-scales (1.3.0-1) ... 276s Selecting previously unselected package r-cran-gtable. 276s Preparing to unpack .../268-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 276s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 276s Selecting previously unselected package r-cran-isoband. 276s Preparing to unpack .../269-r-cran-isoband_0.2.7-1_arm64.deb ... 276s Unpacking r-cran-isoband (0.2.7-1) ... 276s Selecting previously unselected package r-cran-mass. 276s Preparing to unpack .../270-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 276s Unpacking r-cran-mass (7.3-60.0.1-1) ... 276s Selecting previously unselected package r-cran-lattice. 276s Preparing to unpack .../271-r-cran-lattice_0.22-5-1_arm64.deb ... 276s Unpacking r-cran-lattice (0.22-5-1) ... 276s Selecting previously unselected package r-cran-nlme. 277s Preparing to unpack .../272-r-cran-nlme_3.1.164-1_arm64.deb ... 277s Unpacking r-cran-nlme (3.1.164-1) ... 277s Selecting previously unselected package r-cran-matrix. 277s Preparing to unpack .../273-r-cran-matrix_1.6-5-1_arm64.deb ... 277s Unpacking r-cran-matrix (1.6-5-1) ... 277s Selecting previously unselected package r-cran-mgcv. 277s Preparing to unpack .../274-r-cran-mgcv_1.9-1-1_arm64.deb ... 277s Unpacking r-cran-mgcv (1.9-1-1) ... 277s Selecting previously unselected package r-cran-ggplot2. 277s Preparing to unpack .../275-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 277s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 277s Selecting previously unselected package r-cran-cluster. 277s Preparing to unpack .../276-r-cran-cluster_2.1.6-1_arm64.deb ... 277s Unpacking r-cran-cluster (2.1.6-1) ... 277s Selecting previously unselected package r-cran-survival. 277s Preparing to unpack .../277-r-cran-survival_3.5-8-1_arm64.deb ... 277s Unpacking r-cran-survival (3.5-8-1) ... 277s Selecting previously unselected package r-cran-rpart. 277s Preparing to unpack .../278-r-cran-rpart_4.1.23-1_arm64.deb ... 277s Unpacking r-cran-rpart (4.1.23-1) ... 277s Selecting previously unselected package r-cran-nnet. 277s Preparing to unpack .../279-r-cran-nnet_7.3-19-2_arm64.deb ... 277s Unpacking r-cran-nnet (7.3-19-2) ... 277s Selecting previously unselected package r-cran-foreign. 277s Preparing to unpack .../280-r-cran-foreign_0.8.86-1_arm64.deb ... 277s Unpacking r-cran-foreign (0.8.86-1) ... 277s Selecting previously unselected package r-cran-gridextra. 277s Preparing to unpack .../281-r-cran-gridextra_2.3-3build1_all.deb ... 277s Unpacking r-cran-gridextra (2.3-3build1) ... 278s Selecting previously unselected package r-cran-data.table. 278s Preparing to unpack .../282-r-cran-data.table_1.14.10+dfsg-1_arm64.deb ... 278s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 278s Selecting previously unselected package r-cran-backports. 278s Preparing to unpack .../283-r-cran-backports_1.4.1-1_arm64.deb ... 278s Unpacking r-cran-backports (1.4.1-1) ... 278s Selecting previously unselected package r-cran-checkmate. 278s Preparing to unpack .../284-r-cran-checkmate_2.3.1-1_arm64.deb ... 278s Unpacking r-cran-checkmate (2.3.1-1) ... 278s Selecting previously unselected package r-cran-htmlwidgets. 278s Preparing to unpack .../285-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 278s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 278s Selecting previously unselected package r-cran-rstudioapi. 278s Preparing to unpack .../286-r-cran-rstudioapi_0.15.0-1_all.deb ... 278s Unpacking r-cran-rstudioapi (0.15.0-1) ... 278s Selecting previously unselected package r-cran-htmltable. 278s Preparing to unpack .../287-r-cran-htmltable_2.4.2-1_all.deb ... 278s Unpacking r-cran-htmltable (2.4.2-1) ... 278s Selecting previously unselected package r-cran-viridis. 279s Preparing to unpack .../288-r-cran-viridis_0.6.5-1_all.deb ... 279s Unpacking r-cran-viridis (0.6.5-1) ... 279s Selecting previously unselected package r-cran-formula. 279s Preparing to unpack .../289-r-cran-formula_1.2-5-1_all.deb ... 279s Unpacking r-cran-formula (1.2-5-1) ... 279s Selecting previously unselected package r-cran-chron. 279s Preparing to unpack .../290-r-cran-chron_2.3-61-2_arm64.deb ... 279s Unpacking r-cran-chron (2.3-61-2) ... 279s Selecting previously unselected package r-cran-jpeg. 279s Preparing to unpack .../291-r-cran-jpeg_0.1-10-1_arm64.deb ... 279s Unpacking r-cran-jpeg (0.1-10-1) ... 279s Selecting previously unselected package r-cran-deldir. 279s Preparing to unpack .../292-r-cran-deldir_2.0-4-1_arm64.deb ... 279s Unpacking r-cran-deldir (2.0-4-1) ... 279s Selecting previously unselected package r-cran-rcppeigen. 279s Preparing to unpack .../293-r-cran-rcppeigen_0.3.3.9.4-1_arm64.deb ... 279s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 279s Selecting previously unselected package r-cran-interp. 279s Preparing to unpack .../294-r-cran-interp_1.1-6-1_arm64.deb ... 279s Unpacking r-cran-interp (1.1-6-1) ... 279s Selecting previously unselected package r-cran-latticeextra. 279s Preparing to unpack .../295-r-cran-latticeextra_0.6-30-1_all.deb ... 279s Unpacking r-cran-latticeextra (0.6-30-1) ... 279s Selecting previously unselected package r-cran-acepack. 280s Preparing to unpack .../296-r-cran-acepack_1.4.2-1_arm64.deb ... 280s Unpacking r-cran-acepack (1.4.2-1) ... 280s Selecting previously unselected package r-cran-hmisc. 280s Preparing to unpack .../297-r-cran-hmisc_5.1-1-1_arm64.deb ... 280s Unpacking r-cran-hmisc (5.1-1-1) ... 281s Selecting previously unselected package r-cran-dichromat. 281s Preparing to unpack .../298-r-cran-dichromat_1%3a2.0-0.1-1_all.deb ... 281s Unpacking r-cran-dichromat (1:2.0-0.1-1) ... 281s Selecting previously unselected package r-cran-matrixstats. 281s Preparing to unpack .../299-r-cran-matrixstats_1.2.0-1_arm64.deb ... 281s Unpacking r-cran-matrixstats (1.2.0-1) ... 281s Selecting previously unselected package r-bioc-matrixgenerics. 281s Preparing to unpack .../300-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 281s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 281s Selecting previously unselected package r-cran-abind. 281s Preparing to unpack .../301-r-cran-abind_1.4-5-2_all.deb ... 281s Unpacking r-cran-abind (1.4-5-2) ... 281s Selecting previously unselected package r-bioc-s4arrays. 281s Preparing to unpack .../302-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 281s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 281s Selecting previously unselected package r-bioc-sparsearray. 281s Preparing to unpack .../303-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 281s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 282s Selecting previously unselected package r-bioc-delayedarray. 282s Preparing to unpack .../304-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 282s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 282s Selecting previously unselected package r-bioc-summarizedexperiment. 282s Preparing to unpack .../305-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 282s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 282s Selecting previously unselected package r-bioc-rhtslib. 282s Preparing to unpack .../306-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 282s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 282s Selecting previously unselected package r-bioc-rsamtools. 282s Preparing to unpack .../307-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 282s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 282s Selecting previously unselected package r-bioc-genomicalignments. 282s Preparing to unpack .../308-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 282s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 282s Selecting previously unselected package r-cran-rjson. 282s Preparing to unpack .../309-r-cran-rjson_0.2.21-1_arm64.deb ... 282s Unpacking r-cran-rjson (0.2.21-1) ... 282s Selecting previously unselected package r-cran-restfulr. 282s Preparing to unpack .../310-r-cran-restfulr_0.0.15-1_arm64.deb ... 282s Unpacking r-cran-restfulr (0.0.15-1) ... 282s Selecting previously unselected package r-bioc-rtracklayer. 282s Preparing to unpack .../311-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 282s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 282s Selecting previously unselected package r-bioc-genomicfeatures. 282s Preparing to unpack .../312-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 282s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 282s Selecting previously unselected package r-bioc-bsgenome. 282s Preparing to unpack .../313-r-bioc-bsgenome_1.70.2-1_all.deb ... 282s Unpacking r-bioc-bsgenome (1.70.2-1) ... 283s Selecting previously unselected package r-bioc-variantannotation. 283s Preparing to unpack .../314-r-bioc-variantannotation_1.48.1-1_arm64.deb ... 283s Unpacking r-bioc-variantannotation (1.48.1-1) ... 283s Selecting previously unselected package r-bioc-protgenerics. 283s Preparing to unpack .../315-r-bioc-protgenerics_1.34.0-1_all.deb ... 283s Unpacking r-bioc-protgenerics (1.34.0-1) ... 283s Selecting previously unselected package r-bioc-ensembldb. 283s Preparing to unpack .../316-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 283s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 283s Selecting previously unselected package r-bioc-biovizbase. 283s Preparing to unpack .../317-r-bioc-biovizbase_1.50.0-1_arm64.deb ... 283s Unpacking r-bioc-biovizbase (1.50.0-1) ... 283s Selecting previously unselected package r-cran-plyr. 283s Preparing to unpack .../318-r-cran-plyr_1.8.9-1_arm64.deb ... 283s Unpacking r-cran-plyr (1.8.9-1) ... 283s Selecting previously unselected package r-cran-reshape2. 283s Preparing to unpack .../319-r-cran-reshape2_1.4.4-2build1_arm64.deb ... 283s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 283s Selecting previously unselected package r-bioc-graph. 283s Preparing to unpack .../320-r-bioc-graph_1.80.0-1_arm64.deb ... 283s Unpacking r-bioc-graph (1.80.0-1) ... 283s Selecting previously unselected package r-bioc-rbgl. 283s Preparing to unpack .../321-r-bioc-rbgl_1.78.0+dfsg-1_arm64.deb ... 283s Unpacking r-bioc-rbgl (1.78.0+dfsg-1) ... 283s Selecting previously unselected package r-bioc-organismdbi. 284s Preparing to unpack .../322-r-bioc-organismdbi_1.44.0+dfsg-1_all.deb ... 284s Unpacking r-bioc-organismdbi (1.44.0+dfsg-1) ... 284s Selecting previously unselected package r-cran-broom. 284s Preparing to unpack .../323-r-cran-broom_1.0.5+dfsg-1_all.deb ... 284s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 284s Selecting previously unselected package r-cran-forcats. 284s Preparing to unpack .../324-r-cran-forcats_1.0.0-1_all.deb ... 284s Unpacking r-cran-forcats (1.0.0-1) ... 284s Selecting previously unselected package r-cran-clipr. 284s Preparing to unpack .../325-r-cran-clipr_0.8.0-1_all.deb ... 284s Unpacking r-cran-clipr (0.8.0-1) ... 284s Selecting previously unselected package r-cran-tzdb. 284s Preparing to unpack .../326-r-cran-tzdb_0.4.0-2_arm64.deb ... 284s Unpacking r-cran-tzdb (0.4.0-2) ... 284s Selecting previously unselected package r-cran-vroom. 284s Preparing to unpack .../327-r-cran-vroom_1.6.5-1_arm64.deb ... 284s Unpacking r-cran-vroom (1.6.5-1) ... 284s Selecting previously unselected package r-cran-readr. 284s Preparing to unpack .../328-r-cran-readr_2.1.5-1_arm64.deb ... 284s Unpacking r-cran-readr (2.1.5-1) ... 284s Selecting previously unselected package r-cran-haven. 284s Preparing to unpack .../329-r-cran-haven_2.5.4-1_arm64.deb ... 284s Unpacking r-cran-haven (2.5.4-1) ... 284s Selecting previously unselected package r-cran-labelled. 284s Preparing to unpack .../330-r-cran-labelled_2.12.0-2_all.deb ... 284s Unpacking r-cran-labelled (2.12.0-2) ... 284s Selecting previously unselected package r-cran-broom.helpers. 284s Preparing to unpack .../331-r-cran-broom.helpers_1.14.0-2_all.deb ... 284s Unpacking r-cran-broom.helpers (1.14.0-2) ... 285s Selecting previously unselected package r-cran-patchwork. 285s Preparing to unpack .../332-r-cran-patchwork_1.2.0-1_all.deb ... 285s Unpacking r-cran-patchwork (1.2.0-1) ... 285s Selecting previously unselected package r-cran-ggstats. 285s Preparing to unpack .../333-r-cran-ggstats_0.5.1-2_all.deb ... 285s Unpacking r-cran-ggstats (0.5.1-2) ... 285s Selecting previously unselected package r-cran-ggally. 286s Preparing to unpack .../334-r-cran-ggally_2.2.1-1_all.deb ... 286s Unpacking r-cran-ggally (2.2.1-1) ... 286s Selecting previously unselected package r-bioc-ggbio. 286s Preparing to unpack .../335-r-bioc-ggbio_1.50.0-1_all.deb ... 286s Unpacking r-bioc-ggbio (1.50.0-1) ... 286s Selecting previously unselected package r-cran-brio. 286s Preparing to unpack .../336-r-cran-brio_1.1.4-1_arm64.deb ... 286s Unpacking r-cran-brio (1.1.4-1) ... 286s Selecting previously unselected package r-cran-ps. 286s Preparing to unpack .../337-r-cran-ps_1.7.6-1_arm64.deb ... 286s Unpacking r-cran-ps (1.7.6-1) ... 286s Selecting previously unselected package r-cran-processx. 286s Preparing to unpack .../338-r-cran-processx_3.8.3-1_arm64.deb ... 286s Unpacking r-cran-processx (3.8.3-1) ... 286s Selecting previously unselected package r-cran-callr. 286s Preparing to unpack .../339-r-cran-callr_3.7.3-2_all.deb ... 286s Unpacking r-cran-callr (3.7.3-2) ... 286s Selecting previously unselected package r-cran-desc. 286s Preparing to unpack .../340-r-cran-desc_1.4.3-1_all.deb ... 286s Unpacking r-cran-desc (1.4.3-1) ... 287s Selecting previously unselected package r-cran-diffobj. 287s Preparing to unpack .../341-r-cran-diffobj_0.3.5-1_arm64.deb ... 287s Unpacking r-cran-diffobj (0.3.5-1) ... 287s Selecting previously unselected package r-cran-pkgbuild. 287s Preparing to unpack .../342-r-cran-pkgbuild_1.4.3-1_all.deb ... 287s Unpacking r-cran-pkgbuild (1.4.3-1) ... 287s Selecting previously unselected package r-cran-rprojroot. 287s Preparing to unpack .../343-r-cran-rprojroot_2.0.4-1_all.deb ... 287s Unpacking r-cran-rprojroot (2.0.4-1) ... 287s Selecting previously unselected package r-cran-pkgload. 288s Preparing to unpack .../344-r-cran-pkgload_1.3.4-1_all.deb ... 288s Unpacking r-cran-pkgload (1.3.4-1) ... 288s Selecting previously unselected package r-cran-praise. 288s Preparing to unpack .../345-r-cran-praise_1.0.0-4build1_all.deb ... 288s Unpacking r-cran-praise (1.0.0-4build1) ... 288s Selecting previously unselected package r-cran-rematch2. 288s Preparing to unpack .../346-r-cran-rematch2_2.1.2-2build1_all.deb ... 288s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 288s 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up libxpm4:arm64 (1:3.5.17-1) ... 289s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 289s Setting up libxi6:arm64 (2:1.8.1-1) ... 289s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 289s Setting up libdatrie1:arm64 (0.2.13-3) ... 289s Setting up libjs-popper.js (1.16.1+ds-6) ... 289s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 289s Setting up libxcb-render0:arm64 (1.15-1) ... 289s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 289s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 289s Setting up libjs-lunr (2.3.9~dfsg-2) ... 289s Setting up unzip (6.0-28ubuntu3) ... 289s Setting up liblatex-tounicode-perl (0.54-2) ... 289s Setting up x11-common (1:7.7+23ubuntu2) ... 290s Setting up node-html5shiv (3.7.3+dfsg-5) ... 290s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 290s Setting up libdeflate0:arm64 (1.19-1) ... 290s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 290s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 290s Setting up libxcb-shm0:arm64 (1.15-1) ... 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r-bioc-delayedarray (0.28.0+dfsg-1) ... 300s Setting up r-cran-patchwork (1.2.0-1) ... 300s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 300s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 300s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 300s Setting up r-cran-haven (2.5.4-1) ... 300s Setting up r-bioc-annotationdbi (1.64.1-1) ... 300s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 300s Setting up r-cran-testthat (3.2.1-1) ... 300s Setting up r-cran-broom (1.0.5+dfsg-1) ... 300s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 300s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 300s Setting up r-cran-labelled (2.12.0-2) ... 300s Setting up r-bioc-genomicalignments (1.38.2-1) ... 300s Setting up r-cran-bookdown (0.37+dfsg-1) ... 300s Setting up r-bioc-rtracklayer (1.62.0-1) ... 300s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 300s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 300s Setting up r-cran-broom.helpers (1.14.0-2) ... 300s Setting up r-bioc-bsgenome (1.70.2-1) ... 300s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 300s Setting up r-bioc-ensembldb (2.26.0+dfsg-1) ... 300s Setting up r-bioc-organismdbi (1.44.0+dfsg-1) ... 300s Setting up r-cran-ggstats (0.5.1-2) ... 300s Setting up r-bioc-variantannotation (1.48.1-1) ... 300s Setting up r-cran-ggally (2.2.1-1) ... 300s Setting up r-cran-htmltable (2.4.2-1) ... 300s Setting up r-cran-hmisc (5.1-1-1) ... 300s Setting up r-bioc-biovizbase (1.50.0-1) ... 300s Setting up r-bioc-ggbio (1.50.0-1) ... 300s Setting up autopkgtest-satdep (0) ... 300s Processing triggers for man-db (2.12.0-3) ... 301s Processing triggers for install-info (7.1-3) ... 301s Processing triggers for libc-bin (2.39-0ubuntu2) ... 301s Processing triggers for tex-common (6.18) ... 301s Running updmap-sys. This may take some time... done. 301s Running mktexlsr /var/lib/texmf ... done. 301s Building format(s) --all. 341s This may take some time... done. 358s (Reading database ... 130709 files and directories currently installed.) 358s Removing autopkgtest-satdep (0) ... 358s autopkgtest [17:37:45]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 358s autopkgtest [17:37:45]: test pkg-r-autopkgtest: [----------------------- 359s Test: Try to load the R library ggbio 359s 359s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 359s Copyright (C) 2024 The R Foundation for Statistical Computing 359s Platform: aarch64-unknown-linux-gnu (64-bit) 359s 359s R is free software and comes with ABSOLUTELY NO WARRANTY. 359s You are welcome to redistribute it under certain conditions. 359s Type 'license()' or 'licence()' for distribution details. 359s 359s R is a collaborative project with many contributors. 359s Type 'contributors()' for more information and 359s 'citation()' on how to cite R or R packages in publications. 359s 359s Type 'demo()' for some demos, 'help()' for on-line help, or 359s 'help.start()' for an HTML browser interface to help. 359s Type 'q()' to quit R. 359s 360s Loading required package: BiocGenerics 360s > library('ggbio') 360s 360s Attaching package: ‘BiocGenerics’ 360s 360s The following objects are masked from ‘package:stats’: 360s 360s IQR, mad, sd, var, xtabs 360s 360s The following objects are masked from ‘package:base’: 360s 360s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 360s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 360s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 360s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 360s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 360s table, tapply, union, unique, unsplit, which.max, which.min 360s 360s Loading required package: ggplot2 361s Registered S3 method overwritten by 'GGally': 361s method from 361s +.gg ggplot2 376s Need specific help about ggbio? try mailing 376s the maintainer or visit https://lawremi.github.io/ggbio/ 376s 376s Attaching package: 'ggbio' 376s 376s The following objects are masked from 'package:ggplot2': 376s 376s geom_bar, geom_rect, geom_segment, ggsave, stat_bin, stat_identity, 376s xlim 376s 376s > 376s > 376s Other tests are currently unsupported! 376s They will be progressively added. 377s autopkgtest [17:38:04]: test pkg-r-autopkgtest: -----------------------] 377s autopkgtest [17:38:04]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 377s pkg-r-autopkgtest PASS 378s autopkgtest [17:38:05]: @@@@@@@@@@@@@@@@@@@@ summary 378s pkg-r-autopkgtest PASS 396s Creating nova instance adt-noble-arm64-r-bioc-ggbio-20240316-173147-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...