0s autopkgtest [21:33:39]: starting date and time: 2024-03-16 21:33:39+0000 0s autopkgtest [21:33:39]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:33:39]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4bmcpxne/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-curl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-geoquery --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-curl/5.2.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-16.secgroup --name adt-noble-arm64-r-bioc-geoquery-20240316-213339-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 143s autopkgtest [21:36:02]: testbed dpkg architecture: arm64 143s autopkgtest [21:36:02]: testbed apt version: 2.7.12 143s autopkgtest [21:36:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 143s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 143s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3699 kB] 144s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 144s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 144s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 144s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 144s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 144s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 144s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 144s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4018 kB] 144s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 144s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 144s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 146s Fetched 9112 kB in 2s (5805 kB/s) 146s Reading package lists... 148s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Calculating upgrade... 149s The following packages will be REMOVED: 149s libssl3 149s The following NEW packages will be installed: 149s libssl3t64 149s The following packages have been kept back: 149s curl 149s The following packages will be upgraded: 149s openssl ubuntu-minimal ubuntu-standard 150s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 150s Need to get 2775 kB of archives. 150s After this operation, 72.7 kB of additional disk space will be used. 150s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 150s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 150s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 150s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 151s Fetched 2775 kB in 1s (3894 kB/s) 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 151s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 151s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 151s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 151s wget depends on libssl3 (>= 3.0.0). 151s u-boot-tools depends on libssl3 (>= 3.0.0). 151s tnftp depends on libssl3 (>= 3.0.0). 151s tcpdump depends on libssl3 (>= 3.0.0). 151s systemd-resolved depends on libssl3 (>= 3.0.0). 151s systemd depends on libssl3 (>= 3.0.0). 151s sudo depends on libssl3 (>= 3.0.0). 151s sbsigntool depends on libssl3 (>= 3.0.0). 151s rsync depends on libssl3 (>= 3.0.0). 151s python3-cryptography depends on libssl3 (>= 3.0.0). 151s openssh-server depends on libssl3 (>= 3.0.10). 151s openssh-client depends on libssl3 (>= 3.0.10). 151s mtd-utils depends on libssl3 (>= 3.0.0). 151s mokutil depends on libssl3 (>= 3.0.0). 151s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 151s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 151s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 151s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 151s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 151s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 151s libnvme1 depends on libssl3 (>= 3.0.0). 151s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 151s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 151s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 151s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 151s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 151s kmod depends on libssl3 (>= 3.0.0). 151s dhcpcd-base depends on libssl3 (>= 3.0.0). 151s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 151s 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 151s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 151s Selecting previously unselected package libssl3t64:arm64. 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 151s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 151s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 151s Preparing to unpack .../ubuntu-minimal_1.536_arm64.deb ... 151s Unpacking ubuntu-minimal (1.536) over (1.535) ... 151s Preparing to unpack .../ubuntu-standard_1.536_arm64.deb ... 151s Unpacking ubuntu-standard (1.536) over (1.535) ... 151s Setting up ubuntu-minimal (1.536) ... 151s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 151s Setting up ubuntu-standard (1.536) ... 151s Setting up openssl (3.0.13-0ubuntu1) ... 151s Processing triggers for man-db (2.12.0-3) ... 152s Processing triggers for libc-bin (2.39-0ubuntu2) ... 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 153s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 154s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 154s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 154s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 154s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 155s Reading package lists... 155s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s Calculating upgrade... 156s The following packages have been kept back: 156s curl 156s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 156s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 160s autopkgtest [21:36:19]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 160s autopkgtest [21:36:19]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-geoquery 164s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-geoquery 2.70.0+dfsg-1 (dsc) [2267 B] 164s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-geoquery 2.70.0+dfsg-1 (tar) [13.4 MB] 164s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-geoquery 2.70.0+dfsg-1 (diff) [2972 B] 164s gpgv: Signature made Thu Nov 30 07:43:50 2023 UTC 164s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 164s gpgv: issuer "tille@debian.org" 164s gpgv: Can't check signature: No public key 164s dpkg-source: warning: cannot verify inline signature for ./r-bioc-geoquery_2.70.0+dfsg-1.dsc: no acceptable signature found 165s autopkgtest [21:36:24]: testing package r-bioc-geoquery version 2.70.0+dfsg-1 165s autopkgtest [21:36:24]: build not needed 167s autopkgtest [21:36:26]: test pkg-r-autopkgtest: preparing testbed 168s Reading package lists... 168s Building dependency tree... 168s Reading state information... 169s Starting pkgProblemResolver with broken count: 0 169s Starting 2 pkgProblemResolver with broken count: 0 169s Done 169s The following additional packages will be installed: 169s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 169s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 169s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 169s fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 169s gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 169s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 169s javascript-common libasan8 libatomic1 libblas-dev libblas3 libbz2-dev 169s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 169s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 169s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 169s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 169s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 169s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 169s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 169s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 169s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 169s liblapack-dev liblapack3 liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 169s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 169s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 169s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 169s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data 169s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 169s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev 169s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 169s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 169s r-base-dev r-bioc-biobase r-bioc-biocgenerics r-bioc-geoquery r-bioc-limma 169s r-cran-askpass r-cran-base64enc r-cran-bit r-cran-bit64 r-cran-brio 169s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-clipr 169s r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon r-cran-curl 169s r-cran-data.table r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr 169s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 169s r-cran-fontawesome r-cran-fs r-cran-generics r-cran-glue r-cran-highr 169s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib 169s r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lazyeval r-cran-lifecycle 169s r-cran-littler r-cran-magrittr r-cran-markdown r-cran-memoise r-cran-mime 169s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 169s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-prettyunits 169s r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-purrr 169s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs 169s r-cran-rcpp r-cran-readr r-cran-rematch2 r-cran-rex r-cran-rlang 169s r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-shiny 169s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr r-cran-sys 169s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 169s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-vroom r-cran-waldo r-cran-withr 169s r-cran-xfun r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip 169s x11-common xdg-utils zip zlib1g-dev 169s Suggested packages: 169s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 169s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 169s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 169s | lighttpd | httpd liblapack-doc glibc-doc icu-doc libjs-jquery-ui-docs 169s fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc 169s readline-doc libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended 169s texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context 169s wkhtmltopdf librsvg2-bin groff ghc php python ruby libjs-katex 169s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 169s r-base-html texlive-base texlive-latex-base texlive-plain-generic 169s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 169s r-bioc-all r-cran-runit r-bioc-biocstyle r-bioc-s4vectors r-bioc-iranges 169s r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools 169s r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate 169s r-cran-biasedurn r-cran-ellipse r-cran-gplots r-cran-locfit r-cran-mass 169s r-bioc-go.db r-bioc-org.hs.eg.db r-cran-roxygen2 r-cran-ff r-cran-spelling 169s r-cran-rstudioapi r-cran-lubridate r-cran-getopt r-cran-dbi 169s r-cran-formattable r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins 169s r-cran-scales r-cran-survival r-cran-units r-cran-vdiffr r-cran-codetools 169s r-cran-inline r-cran-hmisc r-cran-rvest r-cran-bench r-cran-blob r-cran-here 169s r-cran-plm r-cran-zoo 169s Recommended packages: 169s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 169s r-recommended r-doc-html r-cran-ggplot2 r-cran-thematic r-cran-cliapp 169s r-cran-mockery r-cran-htmlwidgets r-cran-rstudioapi r-cran-whoami r-cran-dt 169s r-cran-bench r-cran-decor r-cran-lobstr r-cran-scales r-cran-spelling 169s r-cran-webutils r-cran-xts r-cran-nanotime r-cran-zoo r-cran-gh r-cran-broom 169s r-cran-dbi r-cran-dbplyr r-cran-rmysql r-cran-rpostgresql r-cran-rsqlite 169s r-cran-lattice r-cran-unitizer r-cran-rsvg r-cran-testit r-cran-cairo 169s r-cran-ragg r-cran-jpeg r-cran-png r-cran-r.rsp r-cran-sf r-cran-codetools 169s r-cran-formatr r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl 169s r-cran-tikzdevice r-cran-webshot r-cran-svglite node-highlight.js 169s r-cran-lintr r-cran-tidyverse r-cran-rcurl r-cran-sodium r-cran-lubridate 169s r-cran-bitops r-cran-mathjaxr r-cran-mockr r-cran-remotes r-cran-webfakes 169s r-cran-future r-cran-pingr r-cran-usethis r-cran-dygraphs r-cran-rsconnect 169s r-cran-downlit r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv 169s r-cran-runit libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 169s x11-utils x11-xserver-utils 169s The following packages will be REMOVED: 169s libcurl4 libpsl5 169s The following NEW packages will be installed: 169s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 169s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 169s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 169s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 169s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 169s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 169s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 169s libatomic1 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 169s libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 169s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 169s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 169s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 169s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 169s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 169s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 169s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 169s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 169s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 169s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 169s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 169s libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 libreadline-dev libsharpyuv0 169s libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6 169s libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 169s libxft2 libxrender1 libxss1 libxt6 linux-libc-dev littler 169s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 169s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 169s r-bioc-biobase r-bioc-biocgenerics r-bioc-geoquery r-bioc-limma 169s r-cran-askpass r-cran-base64enc r-cran-bit r-cran-bit64 r-cran-brio 169s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-clipr 169s r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon r-cran-curl 169s r-cran-data.table r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr 169s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 169s r-cran-fontawesome r-cran-fs r-cran-generics r-cran-glue r-cran-highr 169s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib 169s r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lazyeval r-cran-lifecycle 169s r-cran-littler r-cran-magrittr r-cran-markdown r-cran-memoise r-cran-mime 169s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 169s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-prettyunits 169s r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-purrr 169s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs 169s r-cran-rcpp r-cran-readr r-cran-rematch2 r-cran-rex r-cran-rlang 169s r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-shiny 169s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr r-cran-sys 169s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 169s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-vroom r-cran-waldo r-cran-withr 169s r-cran-xfun r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip 169s x11-common xdg-utils zip zlib1g-dev 169s The following packages will be upgraded: 169s curl 169s 1 upgraded, 231 newly installed, 2 to remove and 0 not upgraded. 169s Need to get 234 MB/234 MB of archives. 169s After this operation, 818 MB of additional disk space will be used. 169s Get:1 /tmp/autopkgtest.vizu1O/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [772 B] 169s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 170s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 170s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 170s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 170s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 170s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 170s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 170s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 170s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 170s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 170s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 170s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 170s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 171s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 171s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 171s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 171s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 171s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 171s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 171s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 171s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 171s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 172s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 172s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 172s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 172s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 172s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 172s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 172s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 172s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 172s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 173s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 173s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 173s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 173s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 173s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 173s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 173s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 173s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 173s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 173s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 173s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 173s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 173s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 173s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 173s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 173s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 173s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 173s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 173s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 173s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 173s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 173s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 173s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 173s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 173s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 173s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 173s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 173s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 173s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 173s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 173s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 173s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 173s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 173s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 173s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 173s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 173s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 174s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 174s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 174s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 174s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 174s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 174s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 174s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 174s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 174s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 174s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 174s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 174s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 174s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 174s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 174s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 174s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 174s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 174s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 174s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 174s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 174s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 174s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 174s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 174s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 174s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 174s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 174s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 174s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 174s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 174s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 174s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 174s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 174s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 174s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 174s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 175s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 175s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 175s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 175s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 175s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 175s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 175s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 175s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 175s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 175s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 175s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 175s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 175s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 175s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 175s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 175s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 175s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 175s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 176s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 176s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 176s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 176s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 176s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 176s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 176s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 177s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 177s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 177s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 177s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 177s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 177s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 177s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 177s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 177s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 177s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-clipr all 0.8.0-1 [53.5 kB] 177s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 177s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 177s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 177s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 177s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 177s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 177s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 177s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 177s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 177s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 177s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 177s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 177s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 177s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 177s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 177s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 177s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 177s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 177s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 177s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 177s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 177s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vroom arm64 1.6.5-1 [832 kB] 177s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 177s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 177s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-readr arm64 2.1.5-1 [756 kB] 177s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 177s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 177s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 177s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-data.table arm64 1.14.10+dfsg-1 [1844 kB] 177s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 177s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 177s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 177s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 177s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 177s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-limma arm64 3.58.1+dfsg-1 [1897 kB] 178s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1build1 [176 kB] 178s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 178s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r.oo all 1.26.0-1 [955 kB] 178s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r.utils all 2.12.3-1 [1386 kB] 178s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-geoquery all 2.70.0+dfsg-1 [13.7 MB] 178s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 178s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 178s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 178s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 178s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 178s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 178s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 178s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 178s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 178s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 178s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 178s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 178s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 178s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 178s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 178s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 178s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 178s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 178s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 178s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 178s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 178s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 178s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 178s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 179s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 179s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 179s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 179s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 179s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 179s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 179s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 179s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 179s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 179s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 179s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 179s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 179s Get:216 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 179s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 179s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-markdown all 1.12+dfsg-1 [179 kB] 179s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 179s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 179s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 179s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 179s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 179s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 179s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 179s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 179s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 180s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 180s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 180s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 180s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 180s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 181s Preconfiguring packages ... 181s Fetched 234 MB in 10s (22.4 MB/s) 181s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 181s wget depends on libpsl5 (>= 0.16.0). 181s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 181s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 181s 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74760 files and directories currently installed.) 181s Removing libpsl5:arm64 (0.21.2-1build1) ... 181s Selecting previously unselected package libpsl5t64:arm64. 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74755 files and directories currently installed.) 181s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 181s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 181s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 181s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74761 files and directories currently installed.) 181s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 181s Selecting previously unselected package libcurl4t64:arm64. 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74756 files and directories currently installed.) 181s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 181s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 181s Selecting previously unselected package libc-dev-bin. 181s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 181s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 181s Selecting previously unselected package linux-libc-dev:arm64. 181s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 181s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 182s Selecting previously unselected package libcrypt-dev:arm64. 182s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 182s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 182s Selecting previously unselected package libtirpc-dev:arm64. 182s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 182s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 182s Selecting previously unselected package libnsl-dev:arm64. 182s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 182s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 182s Selecting previously unselected package rpcsvc-proto. 182s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 182s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 182s Selecting previously unselected package libc6-dev:arm64. 182s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 182s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 182s Selecting previously unselected package libisl23:arm64. 182s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 182s Unpacking libisl23:arm64 (0.26-3) ... 182s Selecting previously unselected package libmpc3:arm64. 182s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 182s Unpacking libmpc3:arm64 (1.3.1-1) ... 182s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 182s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 182s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 182s Selecting previously unselected package cpp-13. 182s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 182s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 182s Selecting previously unselected package cpp-aarch64-linux-gnu. 182s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 182s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 182s Selecting previously unselected package cpp. 182s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 182s Unpacking cpp (4:13.2.0-7ubuntu1) ... 182s Selecting previously unselected package libcc1-0:arm64. 182s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 182s Selecting previously unselected package libgomp1:arm64. 182s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 182s Selecting previously unselected package libitm1:arm64. 182s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 182s Selecting previously unselected package libatomic1:arm64. 182s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 182s Selecting previously unselected package libasan8:arm64. 182s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 182s Selecting previously unselected package liblsan0:arm64. 182s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 182s Selecting previously unselected package libtsan2:arm64. 182s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 182s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 183s Selecting previously unselected package libubsan1:arm64. 183s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 183s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 183s Selecting previously unselected package libhwasan0:arm64. 183s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 183s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 183s Selecting previously unselected package libgcc-13-dev:arm64. 183s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 183s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 183s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 183s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 183s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 183s Selecting previously unselected package gcc-13. 183s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 183s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 183s Selecting previously unselected package gcc-aarch64-linux-gnu. 183s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 183s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 183s Selecting previously unselected package gcc. 183s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 183s Unpacking gcc (4:13.2.0-7ubuntu1) ... 183s Selecting previously unselected package libstdc++-13-dev:arm64. 183s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 183s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 183s Selecting previously unselected package g++-13-aarch64-linux-gnu. 183s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 183s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 184s Selecting previously unselected package g++-13. 184s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 184s Unpacking g++-13 (13.2.0-17ubuntu2) ... 184s Selecting previously unselected package g++-aarch64-linux-gnu. 184s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 184s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 184s Selecting previously unselected package g++. 184s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 184s Unpacking g++ (4:13.2.0-7ubuntu1) ... 184s Selecting previously unselected package build-essential. 184s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 184s Unpacking build-essential (12.10ubuntu1) ... 184s Selecting previously unselected package dctrl-tools. 184s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 184s Unpacking dctrl-tools (2.24-3build2) ... 184s Selecting previously unselected package fonts-dejavu-mono. 184s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 184s Unpacking fonts-dejavu-mono (2.37-8) ... 184s Selecting previously unselected package fonts-dejavu-core. 184s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 184s Unpacking fonts-dejavu-core (2.37-8) ... 184s Selecting previously unselected package fontconfig-config. 184s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 184s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 184s Selecting previously unselected package libfontconfig1:arm64. 184s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 184s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 184s Selecting previously unselected package fontconfig. 184s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 184s Unpacking fontconfig (2.15.0-1ubuntu1) ... 184s Selecting previously unselected package fonts-font-awesome. 184s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 184s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 184s Selecting previously unselected package fonts-glyphicons-halflings. 184s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 184s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 184s Selecting previously unselected package fonts-mathjax. 184s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 184s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 185s Selecting previously unselected package libgfortran5:arm64. 185s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 185s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 185s Selecting previously unselected package libgfortran-13-dev:arm64. 185s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 185s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 185s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 185s Preparing to unpack .../045-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 185s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 185s Selecting previously unselected package gfortran-13. 185s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 185s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 185s Selecting previously unselected package gfortran-aarch64-linux-gnu. 185s Preparing to unpack .../047-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 185s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 185s Selecting previously unselected package gfortran. 185s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 185s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 185s Selecting previously unselected package icu-devtools. 185s Preparing to unpack .../049-icu-devtools_74.2-1ubuntu1_arm64.deb ... 185s Unpacking icu-devtools (74.2-1ubuntu1) ... 185s Selecting previously unselected package javascript-common. 185s Preparing to unpack .../050-javascript-common_11+nmu1_all.deb ... 185s Unpacking javascript-common (11+nmu1) ... 185s Selecting previously unselected package libblas3:arm64. 185s Preparing to unpack .../051-libblas3_3.12.0-3_arm64.deb ... 185s Unpacking libblas3:arm64 (3.12.0-3) ... 185s Selecting previously unselected package libblas-dev:arm64. 185s Preparing to unpack .../052-libblas-dev_3.12.0-3_arm64.deb ... 185s Unpacking libblas-dev:arm64 (3.12.0-3) ... 185s Selecting previously unselected package libbz2-dev:arm64. 185s Preparing to unpack .../053-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 185s Unpacking libbz2-dev:arm64 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libthai-data (0.1.29-2) ... 187s Selecting previously unselected package libthai0:arm64. 187s Preparing to unpack .../091-libthai0_0.1.29-2_arm64.deb ... 187s Unpacking libthai0:arm64 (0.1.29-2) ... 187s Selecting previously unselected package libpango-1.0-0:arm64. 187s Preparing to unpack .../092-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 187s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 187s Selecting previously unselected package libpangoft2-1.0-0:arm64. 187s Preparing to unpack .../093-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 187s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 187s Selecting previously unselected package libpangocairo-1.0-0:arm64. 187s Preparing to unpack .../094-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 187s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 187s Selecting previously unselected package libpaper1:arm64. 187s Preparing to unpack .../095-libpaper1_1.1.29_arm64.deb ... 187s Unpacking libpaper1:arm64 (1.1.29) ... 187s Selecting previously unselected package libpaper-utils. 187s Preparing to unpack .../096-libpaper-utils_1.1.29_arm64.deb ... 187s Unpacking libpaper-utils (1.1.29) ... 187s Selecting previously unselected package libpcre2-16-0:arm64. 187s Preparing to unpack .../097-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 187s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 187s Selecting previously unselected package libpcre2-32-0:arm64. 187s Preparing to unpack .../098-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 187s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 187s Selecting previously unselected package libpcre2-posix3:arm64. 187s Preparing to unpack .../099-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 187s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 187s Selecting previously unselected package libpcre2-dev:arm64. 187s Preparing to unpack .../100-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 187s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 187s Selecting previously unselected package libpkgconf3:arm64. 187s Preparing to unpack .../101-libpkgconf3_1.8.1-2_arm64.deb ... 187s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 187s Selecting previously unselected package zlib1g-dev:arm64. 187s Preparing to unpack .../102-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 187s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 187s Selecting previously unselected package libpng-dev:arm64. 187s Preparing to unpack .../103-libpng-dev_1.6.43-1_arm64.deb ... 187s Unpacking libpng-dev:arm64 (1.6.43-1) ... 187s Selecting previously unselected package libreadline-dev:arm64. 187s Preparing to unpack .../104-libreadline-dev_8.2-3_arm64.deb ... 187s Unpacking libreadline-dev:arm64 (8.2-3) ... 187s Selecting previously unselected package libsharpyuv0:arm64. 187s Preparing to unpack .../105-libsharpyuv0_1.3.2-0.4_arm64.deb ... 187s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 187s Selecting previously unselected package libsm6:arm64. 187s Preparing to unpack .../106-libsm6_2%3a1.2.3-1build2_arm64.deb ... 187s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 187s Selecting previously unselected package libtcl8.6:arm64. 187s Preparing to unpack .../107-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 187s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 187s Selecting previously unselected package libjbig0:arm64. 187s Preparing to unpack .../108-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 187s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 188s Selecting previously unselected package libwebp7:arm64. 188s Preparing to unpack .../109-libwebp7_1.3.2-0.4_arm64.deb ... 188s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 188s Selecting previously unselected package libtiff6:arm64. 188s Preparing to unpack .../110-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 188s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 188s Selecting previously unselected package libxft2:arm64. 188s Preparing to unpack .../111-libxft2_2.3.6-1_arm64.deb ... 188s Unpacking libxft2:arm64 (2.3.6-1) ... 188s Selecting previously unselected package libxss1:arm64. 188s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build2_arm64.deb ... 188s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 188s Selecting previously unselected package libtk8.6:arm64. 188s Preparing to unpack .../113-libtk8.6_8.6.13-2_arm64.deb ... 188s Unpacking libtk8.6:arm64 (8.6.13-2) ... 188s Selecting previously unselected package libxt6:arm64. 188s Preparing to unpack .../114-libxt6_1%3a1.2.1-1.1_arm64.deb ... 188s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 188s Selecting previously unselected package zip. 188s Preparing to unpack .../115-zip_3.0-13_arm64.deb ... 188s Unpacking zip (3.0-13) ... 188s Selecting previously unselected package unzip. 188s Preparing to unpack .../116-unzip_6.0-28ubuntu3_arm64.deb ... 188s Unpacking unzip (6.0-28ubuntu3) ... 188s Selecting previously unselected package xdg-utils. 188s Preparing to unpack .../117-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 188s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 188s Selecting previously unselected package r-base-core. 188s Preparing to unpack .../118-r-base-core_4.3.2-1build1_arm64.deb ... 188s Unpacking r-base-core (4.3.2-1build1) ... 188s Selecting previously unselected package r-cran-littler. 188s Preparing to unpack .../119-r-cran-littler_0.3.19-1_arm64.deb ... 188s Unpacking r-cran-littler (0.3.19-1) ... 188s Selecting previously unselected package littler. 188s Preparing to unpack .../120-littler_0.3.19-1_all.deb ... 188s Unpacking littler (0.3.19-1) ... 188s Selecting previously unselected package node-bootstrap-sass. 189s Preparing to unpack .../121-node-bootstrap-sass_3.4.3-2_all.deb ... 189s Unpacking node-bootstrap-sass (3.4.3-2) ... 189s Selecting previously unselected package node-html5shiv. 189s Preparing to unpack .../122-node-html5shiv_3.7.3+dfsg-5_all.deb ... 189s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 189s Selecting previously unselected package node-normalize.css. 189s Preparing to unpack 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Preparing to unpack .../129-liblzma-dev_5.4.5-0.3_arm64.deb ... 190s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 190s Selecting previously unselected package r-base-dev. 190s Preparing to unpack .../130-r-base-dev_4.3.2-1build1_all.deb ... 190s Unpacking r-base-dev (4.3.2-1build1) ... 190s Selecting previously unselected package pkg-r-autopkgtest. 190s Preparing to unpack .../131-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 190s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 190s Selecting previously unselected package r-bioc-biocgenerics. 190s Preparing to unpack .../132-r-bioc-biocgenerics_0.48.1-2_all.deb ... 190s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 190s Selecting previously unselected package r-bioc-biobase. 190s Preparing to unpack .../133-r-bioc-biobase_2.62.0-1_arm64.deb ... 190s Unpacking r-bioc-biobase (2.62.0-1) ... 190s Selecting previously unselected package r-cran-cli. 190s Preparing to unpack .../134-r-cran-cli_3.6.2-1_arm64.deb ... 190s Unpacking r-cran-cli (3.6.2-1) ... 190s Selecting previously unselected package r-cran-clipr. 190s Preparing to unpack .../135-r-cran-clipr_0.8.0-1_all.deb ... 190s Unpacking r-cran-clipr (0.8.0-1) ... 190s Selecting previously unselected package r-cran-crayon. 190s Preparing to unpack .../136-r-cran-crayon_1.5.2-1_all.deb ... 190s Unpacking r-cran-crayon (1.5.2-1) ... 190s Selecting previously unselected package r-cran-glue. 190s Preparing to unpack .../137-r-cran-glue_1.7.0-1_arm64.deb ... 190s Unpacking r-cran-glue (1.7.0-1) ... 191s Selecting previously unselected package r-cran-rlang. 191s Preparing to unpack .../138-r-cran-rlang_1.1.3-1_arm64.deb ... 191s Unpacking r-cran-rlang (1.1.3-1) ... 191s Selecting previously unselected package r-cran-lifecycle. 191s Preparing to unpack .../139-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 191s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 191s Selecting previously unselected package r-cran-pkgconfig. 191s Preparing to unpack .../140-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 191s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 191s Selecting previously unselected package r-cran-vctrs. 191s Preparing to unpack .../141-r-cran-vctrs_0.6.5-1_arm64.deb ... 191s Unpacking r-cran-vctrs (0.6.5-1) ... 191s Selecting previously unselected package r-cran-hms. 191s Preparing to unpack .../142-r-cran-hms_1.1.3-1_all.deb ... 191s Unpacking r-cran-hms (1.1.3-1) ... 191s Selecting previously unselected package r-cran-r6. 191s Preparing to unpack .../143-r-cran-r6_2.5.1-1_all.deb ... 191s Unpacking r-cran-r6 (2.5.1-1) ... 191s Selecting previously unselected package r-cran-fansi. 191s Preparing to unpack .../144-r-cran-fansi_1.0.5-1_arm64.deb ... 191s Unpacking r-cran-fansi (1.0.5-1) ... 191s Selecting previously unselected package r-cran-magrittr. 191s Preparing to unpack .../145-r-cran-magrittr_2.0.3-1_arm64.deb ... 191s Unpacking r-cran-magrittr (2.0.3-1) ... 191s Selecting previously unselected package r-cran-utf8. 191s Preparing to unpack .../146-r-cran-utf8_1.2.4-1_arm64.deb ... 191s Unpacking r-cran-utf8 (1.2.4-1) ... 191s Selecting previously unselected package r-cran-pillar. 191s Preparing to unpack .../147-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 191s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 191s Selecting previously unselected package r-cran-tibble. 191s Preparing to unpack .../148-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 191s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 191s Selecting previously unselected package r-cran-bit. 191s Preparing to unpack .../149-r-cran-bit_4.0.5-1_arm64.deb ... 191s Unpacking r-cran-bit (4.0.5-1) ... 191s Selecting previously unselected package r-cran-bit64. 191s Preparing to unpack .../150-r-cran-bit64_4.0.5-1_arm64.deb ... 191s Unpacking r-cran-bit64 (4.0.5-1) ... 191s Selecting previously unselected package r-cran-withr. 191s Preparing to unpack .../151-r-cran-withr_2.5.0-1_all.deb ... 191s Unpacking r-cran-withr (2.5.0-1) ... 191s Selecting previously unselected package r-cran-tidyselect. 191s Preparing to unpack .../152-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 191s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 191s Selecting previously unselected package r-cran-cpp11. 191s Preparing to unpack .../153-r-cran-cpp11_0.4.7-1_all.deb ... 191s Unpacking r-cran-cpp11 (0.4.7-1) ... 191s Selecting previously unselected package r-cran-tzdb. 191s Preparing to unpack .../154-r-cran-tzdb_0.4.0-2_arm64.deb ... 191s Unpacking r-cran-tzdb (0.4.0-2) ... 191s Selecting previously unselected package r-cran-prettyunits. 191s Preparing to unpack .../155-r-cran-prettyunits_1.2.0-1_all.deb ... 191s Unpacking r-cran-prettyunits (1.2.0-1) ... 191s Selecting previously unselected package r-cran-progress. 191s Preparing to unpack .../156-r-cran-progress_1.2.3-1_all.deb ... 191s Unpacking r-cran-progress (1.2.3-1) ... 191s Selecting previously unselected package r-cran-vroom. 192s Preparing to unpack .../157-r-cran-vroom_1.6.5-1_arm64.deb ... 192s Unpacking r-cran-vroom (1.6.5-1) ... 192s Selecting previously unselected package r-cran-pkgkitten. 192s Preparing to unpack .../158-r-cran-pkgkitten_0.2.3-1_all.deb ... 192s Unpacking r-cran-pkgkitten (0.2.3-1) ... 192s Selecting previously unselected package r-cran-rcpp. 192s Preparing to unpack .../159-r-cran-rcpp_1.0.12-1_arm64.deb ... 192s Unpacking r-cran-rcpp (1.0.12-1) ... 192s Selecting previously unselected package r-cran-readr. 192s Preparing to unpack .../160-r-cran-readr_2.1.5-1_arm64.deb ... 192s Unpacking r-cran-readr (2.1.5-1) ... 192s Selecting previously unselected package r-cran-xml2. 192s Preparing to unpack .../161-r-cran-xml2_1.3.6-1_arm64.deb ... 192s Unpacking r-cran-xml2 (1.3.6-1) ... 192s Selecting previously unselected package r-cran-generics. 192s Preparing to unpack .../162-r-cran-generics_0.1.3-1_all.deb ... 192s Unpacking r-cran-generics (0.1.3-1) ... 192s Selecting previously unselected package r-cran-dplyr. 192s Preparing to unpack .../163-r-cran-dplyr_1.1.4-1_arm64.deb ... 192s Unpacking r-cran-dplyr (1.1.4-1) ... 192s Selecting previously unselected package r-cran-data.table. 192s Preparing to unpack .../164-r-cran-data.table_1.14.10+dfsg-1_arm64.deb ... 192s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 192s Selecting previously unselected package r-cran-purrr. 192s Preparing to unpack .../165-r-cran-purrr_1.0.2-1_arm64.deb ... 192s Unpacking r-cran-purrr (1.0.2-1) ... 192s Selecting previously unselected package r-cran-stringi. 192s Preparing to unpack .../166-r-cran-stringi_1.8.3-1_arm64.deb ... 192s Unpacking r-cran-stringi (1.8.3-1) ... 192s Selecting previously unselected package r-cran-stringr. 192s Preparing to unpack .../167-r-cran-stringr_1.5.1-1_all.deb ... 192s Unpacking r-cran-stringr (1.5.1-1) ... 192s Selecting previously unselected package r-cran-tidyr. 192s Preparing to unpack .../168-r-cran-tidyr_1.3.1-1_arm64.deb ... 192s Unpacking r-cran-tidyr (1.3.1-1) ... 193s Selecting previously unselected package r-cran-statmod. 193s Preparing to unpack .../169-r-cran-statmod_1.5.0-1_arm64.deb ... 193s Unpacking r-cran-statmod (1.5.0-1) ... 193s Selecting previously unselected package r-bioc-limma. 193s Preparing to unpack .../170-r-bioc-limma_3.58.1+dfsg-1_arm64.deb ... 193s Unpacking r-bioc-limma (3.58.1+dfsg-1) ... 193s Selecting previously unselected package r-cran-curl. 193s Preparing to unpack .../171-r-cran-curl_5.2.0+dfsg-1build1_arm64.deb ... 193s Unpacking r-cran-curl (5.2.0+dfsg-1build1) ... 193s Selecting previously unselected package r-cran-r.methodss3. 193s Preparing to unpack .../172-r-cran-r.methodss3_1.8.2-1_all.deb ... 193s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 193s Selecting previously unselected package r-cran-r.oo. 193s Preparing to unpack .../173-r-cran-r.oo_1.26.0-1_all.deb ... 193s Unpacking r-cran-r.oo (1.26.0-1) ... 193s Selecting previously unselected package r-cran-r.utils. 193s Preparing to unpack .../174-r-cran-r.utils_2.12.3-1_all.deb ... 193s Unpacking r-cran-r.utils (2.12.3-1) ... 193s Selecting previously unselected package r-bioc-geoquery. 193s Preparing to unpack .../175-r-bioc-geoquery_2.70.0+dfsg-1_all.deb ... 193s Unpacking r-bioc-geoquery (2.70.0+dfsg-1) ... 193s Selecting previously unselected package r-cran-sys. 193s Preparing to unpack .../176-r-cran-sys_3.4.2-1_arm64.deb ... 193s Unpacking r-cran-sys (3.4.2-1) ... 193s Selecting previously unselected package r-cran-askpass. 193s Preparing to unpack .../177-r-cran-askpass_1.2.0-1_arm64.deb ... 193s Unpacking r-cran-askpass (1.2.0-1) ... 193s Selecting previously unselected package r-cran-base64enc. 193s Preparing to unpack .../178-r-cran-base64enc_0.1-3-3_arm64.deb ... 193s Unpacking r-cran-base64enc (0.1-3-3) ... 193s Selecting previously unselected package r-cran-brio. 193s Preparing to unpack .../179-r-cran-brio_1.1.4-1_arm64.deb ... 193s Unpacking r-cran-brio (1.1.4-1) ... 193s Selecting previously unselected package r-cran-fastmap. 193s Preparing to unpack .../180-r-cran-fastmap_1.1.1-1_arm64.deb ... 193s Unpacking r-cran-fastmap (1.1.1-1) ... 193s Selecting previously unselected package r-cran-cachem. 193s Preparing to unpack .../181-r-cran-cachem_1.0.8-1_arm64.deb ... 193s Unpacking r-cran-cachem (1.0.8-1) ... 193s Selecting previously unselected package r-cran-digest. 193s Preparing to unpack .../182-r-cran-digest_0.6.34-1_arm64.deb ... 193s Unpacking r-cran-digest (0.6.34-1) ... 193s Selecting previously unselected package r-cran-ellipsis. 193s Preparing to unpack .../183-r-cran-ellipsis_0.3.2-2_arm64.deb ... 193s Unpacking r-cran-ellipsis (0.3.2-2) ... 193s Selecting previously unselected package r-cran-htmltools. 193s Preparing to unpack .../184-r-cran-htmltools_0.5.7-1_arm64.deb ... 193s Unpacking r-cran-htmltools (0.5.7-1) ... 194s Selecting previously unselected package r-cran-jquerylib. 194s Preparing to unpack .../185-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 194s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 194s Selecting previously unselected package r-cran-jsonlite. 194s Preparing to unpack .../186-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 194s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 194s Selecting previously unselected package r-cran-memoise. 194s Preparing to unpack .../187-r-cran-memoise_2.0.1-1_all.deb ... 194s Unpacking r-cran-memoise (2.0.1-1) ... 194s Selecting previously unselected package r-cran-mime. 194s Preparing to unpack .../188-r-cran-mime_0.12-1_arm64.deb ... 194s Unpacking r-cran-mime (0.12-1) ... 194s Selecting previously unselected package r-cran-fs. 194s Preparing to unpack .../189-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 194s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 194s Selecting previously unselected package r-cran-rappdirs. 194s Preparing to unpack .../190-r-cran-rappdirs_0.3.3-1_arm64.deb ... 194s Unpacking r-cran-rappdirs (0.3.3-1) ... 194s Selecting previously unselected package r-cran-sass. 194s Preparing to unpack .../191-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 194s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 194s Selecting previously unselected package r-cran-bslib. 194s Preparing to unpack .../192-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 194s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 194s Selecting previously unselected package r-cran-ps. 194s Preparing to unpack .../193-r-cran-ps_1.7.6-1_arm64.deb ... 194s Unpacking r-cran-ps (1.7.6-1) ... 194s Selecting previously unselected package r-cran-processx. 194s Preparing to unpack .../194-r-cran-processx_3.8.3-1_arm64.deb ... 194s Unpacking r-cran-processx (3.8.3-1) ... 194s Selecting previously unselected package r-cran-callr. 194s Preparing to unpack .../195-r-cran-callr_3.7.3-2_all.deb ... 194s Unpacking r-cran-callr (3.7.3-2) ... 194s Selecting previously unselected package r-cran-commonmark. 194s Preparing to unpack .../196-r-cran-commonmark_1.9.1-1_arm64.deb ... 194s Unpacking r-cran-commonmark (1.9.1-1) ... 194s Selecting previously unselected package r-cran-lazyeval. 194s Preparing to unpack .../197-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 194s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 194s Selecting previously unselected package r-cran-rex. 194s Preparing to unpack .../198-r-cran-rex_1.2.1-1_all.deb ... 194s Unpacking r-cran-rex (1.2.1-1) ... 194s Selecting previously unselected package r-cran-openssl. 194s Preparing to unpack .../199-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 194s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 195s Selecting previously unselected package r-cran-httr. 195s Preparing to unpack .../200-r-cran-httr_1.4.7+dfsg-1_all.deb ... 195s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 195s Selecting previously unselected package r-cran-yaml. 195s Preparing to unpack .../201-r-cran-yaml_2.3.8-1_arm64.deb ... 195s Unpacking r-cran-yaml (2.3.8-1) ... 195s Selecting previously unselected package r-cran-covr. 195s Preparing to unpack .../202-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 195s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 195s Selecting previously unselected package r-cran-desc. 195s Preparing to unpack .../203-r-cran-desc_1.4.3-1_all.deb ... 195s Unpacking r-cran-desc (1.4.3-1) ... 195s Selecting previously unselected package r-cran-diffobj. 195s Preparing to unpack .../204-r-cran-diffobj_0.3.5-1_arm64.deb ... 195s Unpacking r-cran-diffobj (0.3.5-1) ... 195s Selecting previously unselected package r-cran-evaluate. 195s Preparing to unpack .../205-r-cran-evaluate_0.23-1_all.deb ... 195s Unpacking r-cran-evaluate (0.23-1) ... 195s Selecting previously unselected package r-cran-fontawesome. 195s Preparing to unpack .../206-r-cran-fontawesome_0.5.2-1_all.deb ... 195s Unpacking r-cran-fontawesome (0.5.2-1) ... 195s Selecting previously unselected package r-cran-xfun. 195s Preparing to unpack .../207-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 195s Unpacking r-cran-xfun (0.41+dfsg-1) ... 195s Selecting previously unselected package r-cran-highr. 195s Preparing to unpack .../208-r-cran-highr_0.10+dfsg-1_all.deb ... 195s Unpacking r-cran-highr (0.10+dfsg-1) ... 195s Selecting previously unselected package r-cran-later. 195s Preparing to unpack .../209-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 195s Unpacking r-cran-later (1.3.2+dfsg-1) ... 195s Selecting previously unselected package r-cran-promises. 195s Preparing to unpack .../210-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 195s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 195s Selecting previously unselected package r-cran-httpuv. 195s Preparing to unpack .../211-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 195s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 195s Selecting previously unselected package libjs-mathjax. 195s Preparing to unpack .../212-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 195s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 196s Selecting previously unselected package r-cran-knitr. 196s Preparing to unpack .../213-r-cran-knitr_1.45+dfsg-1_all.deb ... 196s Unpacking r-cran-knitr (1.45+dfsg-1) ... 196s Selecting previously unselected package r-cran-markdown. 196s Preparing to unpack .../214-r-cran-markdown_1.12+dfsg-1_all.deb ... 196s Unpacking r-cran-markdown (1.12+dfsg-1) ... 196s Selecting previously unselected package r-cran-pkgbuild. 196s Preparing to unpack .../215-r-cran-pkgbuild_1.4.3-1_all.deb ... 196s Unpacking r-cran-pkgbuild (1.4.3-1) ... 196s Selecting previously unselected package r-cran-rprojroot. 196s Preparing to unpack .../216-r-cran-rprojroot_2.0.4-1_all.deb ... 196s Unpacking r-cran-rprojroot (2.0.4-1) ... 196s Selecting previously unselected package r-cran-pkgload. 196s Preparing to unpack .../217-r-cran-pkgload_1.3.4-1_all.deb ... 196s Unpacking r-cran-pkgload (1.3.4-1) ... 197s Selecting previously unselected package r-cran-praise. 197s Preparing to unpack .../218-r-cran-praise_1.0.0-4build1_all.deb ... 197s Unpacking r-cran-praise (1.0.0-4build1) ... 197s Selecting previously unselected package r-cran-rematch2. 197s Preparing to unpack .../219-r-cran-rematch2_2.1.2-2build1_all.deb ... 197s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 197s Selecting previously unselected package r-cran-tinytex. 197s Preparing to unpack .../220-r-cran-tinytex_0.49-1_all.deb ... 197s Unpacking r-cran-tinytex (0.49-1) ... 197s Selecting previously unselected package libjs-modernizr. 197s Preparing to unpack .../221-libjs-modernizr_2.6.2+ds1-5_all.deb ... 197s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 197s Selecting previously unselected package r-cran-xtable. 197s Preparing to unpack .../222-r-cran-xtable_1%3a1.8-4-2_all.deb ... 197s Unpacking r-cran-xtable (1:1.8-4-2) ... 197s Selecting previously unselected package r-cran-sourcetools. 197s Preparing to unpack .../223-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 197s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 197s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 197s Preparing to unpack .../224-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 197s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 197s Selecting previously unselected package r-cran-shiny. 197s Preparing to unpack .../225-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 197s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 197s Selecting previously unselected package r-cran-rmarkdown. 197s Preparing to unpack .../226-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 197s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 197s Selecting previously unselected package r-cran-waldo. 197s Preparing to unpack .../227-r-cran-waldo_0.5.2-1build1_all.deb ... 197s Unpacking r-cran-waldo (0.5.2-1build1) ... 197s Selecting previously unselected package r-cran-testthat. 197s Preparing to unpack .../228-r-cran-testthat_3.2.1-1_arm64.deb ... 197s Unpacking r-cran-testthat (3.2.1-1) ... 197s Selecting previously unselected package autopkgtest-satdep. 197s Preparing to unpack .../229-1-autopkgtest-satdep.deb ... 197s Unpacking autopkgtest-satdep (0) ... 197s Setting up libjs-json (0~20221030+~1.0.8-1) ... 197s Setting up javascript-common (11+nmu1) ... 198s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 198s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 198s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 198s Setting up libpaper1:arm64 (1.1.29) ... 198s 198s Creating config file /etc/papersize with new version 198s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 198s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 198s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 198s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 198s Setting up libdatrie1:arm64 (0.2.13-3) ... 198s Setting up libjs-popper.js (1.16.1+ds-6) ... 198s Setting up libxcb-render0:arm64 (1.15-1) ... 198s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 198s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 198s Setting up unzip (6.0-28ubuntu3) ... 198s Setting up x11-common (1:7.7+23ubuntu2) ... 199s Setting up node-html5shiv (3.7.3+dfsg-5) ... 199s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 199s Setting up libdeflate0:arm64 (1.19-1) ... 199s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 199s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 199s Setting up libxcb-shm0:arm64 (1.15-1) ... 199s Setting up libpaper-utils (1.1.29) ... 199s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libjs-modernizr (2.6.2+ds1-5) ... 199s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 199s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 199s Setting up libjs-es5-shim (4.6.7-2) ... 199s Setting up zip (3.0-13) ... 199s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 199s Setting up libblas3:arm64 (3.12.0-3) ... 199s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 199s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 199s Setting up libpkgconf3:arm64 (1.8.1-2) ... 199s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 199s Setting up libjs-d3 (3.5.17-4) ... 199s Setting up fonts-dejavu-mono (2.37-8) ... 199s Setting up libmpc3:arm64 (1.3.1-1) ... 199s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 199s Setting up icu-devtools (74.2-1ubuntu1) ... 199s Setting up fonts-dejavu-core (2.37-8) ... 199s Setting up pkgconf-bin (1.8.1-2) ... 199s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 199s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libwebp7:arm64 (1.3.2-0.4) ... 199s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 199s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 199s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 199s Setting up libnsl-dev:arm64 (1.3.0-3) ... 199s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 199s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 199s Setting up liblua5.4-0:arm64 (5.4.6-3) ... 199s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 199s Setting up libthai-data (0.1.29-2) ... 199s Setting up node-bootstrap-sass (3.4.3-2) ... 199s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 199s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 199s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 199s Setting up pandoc-data (3.1.3-1) ... 199s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 199s Setting up libisl23:arm64 (0.26-3) ... 199s Setting up libc-dev-bin (2.39-0ubuntu2) ... 199s Setting up node-normalize.css (8.0.1-5) ... 199s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 199s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 199s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 199s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 199s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libblas-dev:arm64 (3.12.0-3) ... 199s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 199s Setting up dctrl-tools (2.24-3build2) ... 199s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 199s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 199s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 199s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 199s Setting up libice6:arm64 (2:1.0.10-1build2) ... 199s Setting up liblapack3:arm64 (3.12.0-3) ... 199s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 199s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 199s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 199s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 199s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 199s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 199s Setting up pkgconf:arm64 (1.8.1-2) ... 199s Setting up libthai0:arm64 (0.1.29-2) ... 199s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 199s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 199s Setting up pandoc (3.1.3+ds-2) ... 199s Setting up liblapack-dev:arm64 (3.12.0-3) ... 199s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 199s Setting up pkg-config:arm64 (1.8.1-2) ... 199s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 199s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 199s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 199s Setting up curl (8.5.0-2ubuntu7) ... 199s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 199s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 199s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 199s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 199s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 199s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 199s Setting up fontconfig (2.15.0-1ubuntu1) ... 201s Regenerating fonts cache... done. 201s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 201s Setting up libxft2:arm64 (2.3.6-1) ... 201s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 201s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 201s Setting up cpp-13 (13.2.0-17ubuntu2) ... 201s Setting up libtk8.6:arm64 (8.6.13-2) ... 201s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 201s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 201s Setting up libreadline-dev:arm64 (8.2-3) ... 201s Setting up libcairo2:arm64 (1.18.0-1) ... 201s Setting up gcc-13 (13.2.0-17ubuntu2) ... 201s Setting up libxt6:arm64 (1:1.2.1-1.1) ... 201s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 201s Setting up cpp (4:13.2.0-7ubuntu1) ... 201s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 201s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 201s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 201s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 201s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 201s Setting up g++-13 (13.2.0-17ubuntu2) ... 201s Setting up libpng-dev:arm64 (1.6.43-1) ... 201s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 201s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 201s Setting up gcc (4:13.2.0-7ubuntu1) ... 201s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 201s Setting up r-base-core (4.3.2-1build1) ... 202s 202s Creating config file /etc/R/Renviron with new version 202s Setting up r-cran-crayon (1.5.2-1) ... 202s Setting up r-cran-sourcetools (0.1.7-1-1) ... 202s Setting up r-cran-ps (1.7.6-1) ... 202s Setting up r-cran-statmod (1.5.0-1) ... 202s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 202s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 202s Setting up r-cran-lazyeval (0.2.2-1build1) ... 202s Setting up r-cran-clipr (0.8.0-1) ... 202s Setting up r-cran-commonmark (1.9.1-1) ... 202s Setting up r-cran-r6 (2.5.1-1) ... 202s Setting up r-cran-pkgkitten (0.2.3-1) ... 202s Setting up r-cran-magrittr (2.0.3-1) ... 202s Setting up r-cran-rappdirs (0.3.3-1) ... 202s Setting up r-cran-littler (0.3.19-1) ... 202s Setting up r-cran-fs (1.6.3+dfsg-1) ... 202s Setting up r-cran-rcpp (1.0.12-1) ... 202s Setting up r-cran-curl (5.2.0+dfsg-1build1) ... 202s Setting up r-cran-brio (1.1.4-1) ... 202s Setting up r-cran-diffobj (0.3.5-1) ... 202s Setting up r-bioc-biocgenerics (0.48.1-2) ... 202s Setting up r-cran-rlang (1.1.3-1) ... 202s Setting up littler (0.3.19-1) ... 202s Setting up r-cran-xfun (0.41+dfsg-1) ... 202s Setting up r-cran-sys (3.4.2-1) ... 202s Setting up r-cran-withr (2.5.0-1) ... 202s Setting up r-cran-processx (3.8.3-1) ... 202s Setting up r-cran-mime (0.12-1) ... 202s Setting up r-cran-praise (1.0.0-4build1) ... 202s Setting up r-cran-generics (0.1.3-1) ... 202s Setting up r-cran-base64enc (0.1-3-3) ... 202s Setting up r-cran-digest (0.6.34-1) ... 202s Setting up r-cran-yaml (2.3.8-1) ... 202s Setting up r-cran-evaluate (0.23-1) ... 202s Setting up r-cran-highr (0.10+dfsg-1) ... 202s Setting up r-cran-prettyunits (1.2.0-1) ... 202s Setting up r-cran-fansi (1.0.5-1) ... 202s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 202s Setting up r-cran-glue (1.7.0-1) ... 202s Setting up r-cran-bit (4.0.5-1) ... 202s Setting up r-cran-xtable (1:1.8-4-2) ... 202s Setting up r-cran-cli (3.6.2-1) ... 202s Setting up gfortran (4:13.2.0-7ubuntu1) ... 202s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 202s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 202s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 202s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 202s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 202s Setting up r-cran-rprojroot (2.0.4-1) ... 202s Setting up r-cran-bit64 (4.0.5-1) ... 202s Setting up r-cran-askpass (1.2.0-1) ... 202s Setting up r-cran-fastmap (1.1.1-1) ... 202s Setting up r-cran-r.methodss3 (1.8.2-1) ... 202s Setting up r-bioc-biobase (2.62.0-1) ... 202s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 202s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 202s Setting up r-cran-utf8 (1.2.4-1) ... 202s Setting up r-cran-stringi (1.8.3-1) ... 202s Setting up r-cran-rex (1.2.1-1) ... 202s Setting up r-cran-markdown (1.12+dfsg-1) ... 202s Setting up r-cran-cpp11 (0.4.7-1) ... 202s Setting up r-bioc-limma (3.58.1+dfsg-1) ... 202s Setting up r-cran-later (1.3.2+dfsg-1) ... 202s Setting up r-cran-tinytex (0.49-1) ... 202s Setting up r-cran-knitr (1.45+dfsg-1) ... 202s Setting up g++ (4:13.2.0-7ubuntu1) ... 202s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 202s Setting up r-cran-cachem (1.0.8-1) ... 202s Setting up build-essential (12.10ubuntu1) ... 202s Setting up r-cran-tzdb (0.4.0-2) ... 202s Setting up r-cran-vctrs (0.6.5-1) ... 202s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 202s Setting up r-cran-ellipsis (0.3.2-2) ... 202s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 202s Setting up r-base-dev (4.3.2-1build1) ... 202s Setting up r-cran-stringr (1.5.1-1) ... 202s Setting up r-cran-callr (3.7.3-2) ... 202s Setting up r-cran-desc (1.4.3-1) ... 202s Setting up r-cran-xml2 (1.3.6-1) ... 202s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 202s Setting up r-cran-r.oo (1.26.0-1) ... 202s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 202s Setting up r-cran-httr (1.4.7+dfsg-1) ... 202s Setting up r-cran-hms (1.1.3-1) ... 202s Setting up r-cran-memoise (2.0.1-1) ... 202s Setting up r-cran-covr (3.6.4+dfsg-1) ... 202s Setting up r-cran-promises (1.2.1+dfsg-1) ... 202s Setting up r-cran-purrr (1.0.2-1) ... 202s Setting up r-cran-htmltools (0.5.7-1) ... 202s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 202s Setting up r-cran-pkgbuild (1.4.3-1) ... 202s Setting up r-cran-sass (0.4.8+dfsg-1) ... 202s Setting up r-cran-dplyr (1.1.4-1) ... 202s Setting up r-cran-progress (1.2.3-1) ... 202s Setting up r-cran-pkgload (1.3.4-1) ... 202s Setting up r-cran-r.utils (2.12.3-1) ... 202s Setting up r-cran-vroom (1.6.5-1) ... 202s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 202s Setting up r-cran-rematch2 (2.1.2-2build1) ... 202s Setting up r-cran-fontawesome (0.5.2-1) ... 202s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 202s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 202s Setting up r-cran-readr (2.1.5-1) ... 202s Setting up r-cran-waldo (0.5.2-1build1) ... 202s Setting up r-cran-tidyr (1.3.1-1) ... 202s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 202s Setting up r-cran-testthat (3.2.1-1) ... 202s Setting up r-bioc-geoquery (2.70.0+dfsg-1) ... 202s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 202s Setting up autopkgtest-satdep (0) ... 202s Processing triggers for man-db (2.12.0-3) ... 203s Processing triggers for install-info (7.1-3) ... 203s Processing triggers for libc-bin (2.39-0ubuntu2) ... 219s (Reading database ... 96636 files and directories currently installed.) 219s Removing autopkgtest-satdep (0) ... 220s autopkgtest [21:37:19]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 220s autopkgtest [21:37:19]: test pkg-r-autopkgtest: [----------------------- 220s Test: Try to load the R library GEOquery 221s 221s R version 4.3.2 (2023-10-31) -- "Eye Holes" 221s Copyright (C) 2023 The R Foundation for Statistical Computing 221s Platform: aarch64-unknown-linux-gnu (64-bit) 221s 221s R is free software and comes with ABSOLUTELY NO WARRANTY. 221s You are welcome to redistribute it under certain conditions. 221s Type 'license()' or 'licence()' for distribution details. 221s 221s R is a collaborative project with many contributors. 221s Type 'contributors()' for more information and 221s 'citation()' on how to cite R or R packages in publications. 221s 221s Type 'demo()' for some demos, 'help()' for on-line help, or 221s 'help.start()' for an HTML browser interface to help. 221s Type 'q()' to quit R. 221s 221s > library('GEOquery') 221s Loading required package: Biobase 221s Loading required package: BiocGenerics 221s 221s Attaching package: ‘BiocGenerics’ 221s 221s The following objects are masked from ‘package:stats’: 221s 221s IQR, mad, sd, var, xtabs 221s 221s The following objects are masked from ‘package:base’: 221s 221s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 221s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 221s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 221s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 221s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 221s table, tapply, union, unique, unsplit, which.max, which.min 221s 222s Welcome to Bioconductor 222s 222s Vignettes contain introductory material; view with 222s 'browseVignettes()'. To cite Bioconductor, see 222s 'citation("Biobase")', and for packages 'citation("pkgname")'. 222s 223s Setting options('download.file.method.GEOquery'='auto') 223s Setting options('GEOquery.inmemory.gpl'=FALSE) 223s > 223s > 223s Other tests are currently unsupported! 223s They will be progressively added. 223s autopkgtest [21:37:22]: test pkg-r-autopkgtest: -----------------------] 224s autopkgtest [21:37:23]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 224s pkg-r-autopkgtest PASS 224s autopkgtest [21:37:23]: @@@@@@@@@@@@@@@@@@@@ summary 224s pkg-r-autopkgtest PASS 228s Creating nova instance adt-noble-arm64-r-bioc-geoquery-20240316-213339-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...